Chromosome 1 - RH Maps - Single Contig

Chromosome 1 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_021973

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_021973	AL592228	227027890	1	RH78786	1	729.65					1		AL592228
S/G/Y/R/B/O	NT_021973	AL117349	227143514	3	RH49276	1	729.75					1		AL117349
S/G/Y/R/B/O	NT_021973	AL078646	227208230	3	RH64521	1	729.85					1		AL078646
S/G/Y/R/B/O	NT_021973	AL136988	227363000	3	RH18350	1	735.80					1	AC024008,	AC024008, AL136988, Y10344
S/G/Y/R/B/O	NT_021973	AL136988	227364468	3	RH12675	1	734.55					1	AC024008, AL691479,	AC024008, AL136988, AL691479, Y10344
S/G/Y/R/B/O	NT_021973	AL136988	227364486	3	RH10492	1	735.17					1	AC024008, AL691479,	AC024008, AL136988, AL691479
S/G/Y/R/B/O	NT_021973	AL136988	227366610	3	RH12089	1	735.59					1	AL691479,	AL136988, AL691479
S/G/Y/R/B/O	NT_021973	AC024008	227397036	1	RH64319	1	735.59			1	907.00	1	AL691479,	AL691479
S/G/Y/R/B/O	NT_021973	AC024008	227397148	1	RH63825	1	735.80			1	907.00	1	AL691479,	AC024008, AL691479
S/G/Y/R/B/O	NT_021973	AL691479	227404317	1	RH16730	1	735.80					1	AC024008,	AC024008, AL691479
S/G/Y/R/B/O	NT_021973	AL691479	227430995	1	RH64737	1	735.80					1	AC024008,	AC024008, AL691479
S/G/Y/R/B/O	NT_021973	AL691479	227431063	1	RH64527	1	737.12					1	AC024008,	AC024008, AL691479
S/G/Y/R/B/O	NT_021973	AL133516	227547834	3	RH64449	1	737.43			1	908.30	1		AC005386, AC006174, AL133516, AL359975
S/G/Y/R/B/O	NT_021973	AL133516	227547867	3	RH16670	1	737.43					1		AC005386, AC006174, AL133516, AL359975
S/G/Y/R/B/O	NT_021973	AL513262	227600032	3	AFM267XA5					1	908.30	1		AC005386, AC006174
S/G/Y/R/B/O	NT_021973	AL158214	227640119	3	RH49386	1	737.25					1		AC005386, AC006174
S/G/Y/R/B/O	NT_021973	AL158214	227731196	3	RH50419	1	735.80			1	907.00	1		AL157880, AL158214
S/G/Y/R/B/O	NT_021973	AL158214	227764500	3	RH94014	1	737.43					1		AL158214
S/G/Y/R/B/O	NT_021973	AL158214	227772840	3	RH28507	1	736.32					1		AL158214
S/G/Y/R/B/O	NT_021973	AL158214	227776170	3	RH71068	1	737.43					1		AL157880, AL158214
S/G/Y/R/B/O	NT_021973	AL158214	227776170	3	SGC35435					1	886.30	1		AL157880, AL158214
S/G/Y/R/B/O	NT_021973	AL158214	227776348	3	RH69588	1	737.43					1		AL157880, AL158214
S/G/Y/R/B/O	NT_021973	AL158214	227776531	3	RH70983	1	737.43					1		AL157880, AL158214
S/G/Y/R/B/O	NT_021973	AL158214	227776544	3	RH36600	1	737.43					1		AL157880, AL158214
S/G/Y/R/B/O	NT_021973	AL158214	227784978	3	RH75277	1	736.11					1	AL512328,	AL157880, AL158214, AL512328
S/G/Y/R/B/O	NT_021973	AL158214	227785316	3	RH64437	1	735.59			1	908.30	1	AL512328,	AL157880, AL158214, AL512328
S/G/Y/R/B/O	NT_021973	AL158214	227785316	3	RH32071			1	9110.00			1	AL512328,	AL157880, AL158214, AL512328
S/G/Y/R/B/O	NT_021973	AL158214	227785379	3	RH11575	1	737.43					1	AL512328,	AL157880, AL158214, AL512328
S/G/Y/R/B/O	NT_021973	AL158214	227785379	3	RH11650	1	737.43					1	AL512328,	AL157880, AL158214, AL512328
S/G/Y/R/B/O	NT_021973	AL158214	227785600	3	RH11822	1	737.43					1	AL512328,	AL157880, AL158214, AL512328
S/G/Y/R/B/O	NT_021973	AL512328	227794248	3	RH91381	1	737.43					1		AL157880, AL512328
S/G/Y/R/B/O	NT_021973	AL591291	227852229	3	CHLC.GATA44E05					1	908.30	1		AL591291
S/G/Y/R/B/O	NT_021973	AL118511	227919900	3	RH12505	1	737.43					1		AL118511
S/G/Y/R/B/O	NT_021973	AL118511	227921002	3	RH26027	1	737.22					1		AL118511
S/G/Y/R/B/O	NT_021973	AL591292	227979739	3
S/G/Y/R/B/O	NT_021973		-		RH104554	1	737.43					0
S/G/Y/R/B/O	NT_021973		-		RH14076			1	8978.00			1	AL589986,	AL450993, AL589986
S/G/Y/R/B/O	NT_021973		-		WI-10119					1	901.50	1	AC007198, AL359979,	AC007198, AL359979
S/G/Y/R/B/O	NT_021973		-		RH26284	1	737.02					0
S/G/Y/R/B/O	NT_021973		-		WI-16074					1	902.40	1	AL590966,	AL590966
S/G/Y/R/B/O	NT_021973		-		RH45528	1	737.05					0
S/G/Y/R/B/O	NT_021973		-		RH68927	1	737.43					0
S/G/Y/R/B/O	NT_021973		-		RH71125	1	737.43					0
S/G/Y/R/B/O	NT_021973		-		RH75172	1	736.11					0
S/G/Y/R/B/O	NT_021973		-		RH76541	1	735.38					0