Home    Genome Browser    BLAT Search    Help
  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_030584
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030584AF188031158442741          
S/G/Y/R/B/O NT_030584AL049569159396193RH18012162.42    1 AL049569
S/G/Y/R/B/O NT_030584AL049569159396493RH64188162.04    1 AL049569
S/G/Y/R/B/O NT_030584AL049569159396493RH79126163.43    1 AL049569
S/G/Y/R/B/O NT_030584AL049569159510753RH63828162.04    1 AL049569
S/G/Y/R/B/O NT_030584AL049569159833283RH93530164.20    1 AC026021, AL049569
S/G/Y/R/B/O NT_030584AL049569159838963RH70265165.93    1 AC026021, AL049569
S/G/Y/R/B/O NT_030584AL049569160318783RH32459  14602.00  1 AC026021, AL049569
S/G/Y/R/B/O NT_030584AL049569160329503RH48340163.47    1 AC026021, AL049569
S/G/Y/R/B/O NT_030584AL049569160337663RH64690164.20    1 AC026021, AL049569
S/G/Y/R/B/O NT_030584AL049569160339233RH1227  14474.00  1 AC026021, AL049569
S/G/Y/R/B/O NT_030584AL590644161226053          
S/G/Y/R/B/O NT_030584AL138798162854643          
S/G/Y/R/B/O NT_030584AL390994163517782          
S/G/Y/R/B/O NT_030584AL139250165403943          
S/G/Y/R/B/O NT_030584AL358593166428821RH70498169.84    1 AC026942, AL358593
S/G/Y/R/B/O NT_030584AL358593166579541RH26075178.48    1 AC026942, AL358593
S/G/Y/R/B/O NT_030584AL358593166625071RH64202170.04    1 AC026942, AL358593
S/G/Y/R/B/O NT_030584AL358593166625071WI-13118    169.501 AC026942, AL358593
S/G/Y/R/B/O NT_030584AL136529167060173RH49738167.74    1AL358593, AC026942, AL136529, AL358593, AL359492
S/G/Y/R/B/O NT_030584AL136529167060173CHLC.GAAT4D10    169.501AL358593, AC026942, AL136529, AL358593, AL359492
S/G/Y/R/B/O NT_030584AL136529167313463RH64512170.04    1AL358593, AC026942, AL136529, AL358593
S/G/Y/R/B/O NT_030584AL136529167914613RH64467169.84    1 AC026942, AL136529, AL358795, AL359492
S/G/Y/R/B/O NT_030584AL136529167914613SGC35351    169.501 AC026942, AL136529, AL358795, AL359492
S/G/Y/R/B/O NT_030584AL136529167917683RH64425169.84    1 AC026942, AL136529, AL358795, AL359492
S/G/Y/R/B/O NT_030584AL136529167917683WI-16678    172.501 AC026942, AL136529, AL358795, AL359492
S/G/Y/R/B/O NT_030584AL356552168444123          
S/G/Y/R/B/O NT_030584AL355875168699453          
S/G/Y/R/B/O NT_030584AL357509169173072          
S/G/Y/R/B/O NT_030584 - RH104463164.58    0 More than 15
S/G/Y/R/B/O NT_030584 - RH49862170.44    0  
S/G/Y/R/B/O NT_030584 - RH68104164.58    1AL592309, AL713858, AL354666, AL356581, AL391068, AL590643, AL592309, AL713858
S/G/Y/R/B/O NT_030584 - RH69033163.78    1AC040162, AC040162
S/G/Y/R/B/O NT_030584 - RH76103164.37    1AL358253, AL358253
S/G/Y/R/B/O NT_030584 - RH80741170.14    0