Chromosome 1 - RH Maps - Single Contig

Chromosome 1 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_004641

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_004641	AC016857	59391796	1
S/G/Y/R/B/O	NT_004641	AC058796	59400596	1
S/G/Y/R/B/O	NT_004641	AC096535	59409580	1
S/G/Y/R/B/O	NT_004641	AL035416	59449856	3
S/G/Y/R/B/O	NT_004641	AC113175	59581336	1	RH64793	1	166.99					1		AC068202, AC113175
S/G/Y/R/B/O	NT_004641	AC113175	59581336	1	RH8846			1	2823.00			1		AC068202, AC113175
S/G/Y/R/B/O	NT_004641	AC113175	59581354	1	RH63783	1	166.99			1	194.10	1		AC068202, AC113175
S/G/Y/R/B/O	NT_004641	AC113175	59584180	1	RH1383			1	2823.00			1		AC068202, AC113175
S/G/Y/R/B/O	NT_004641	AC113175	59584468	1	RH50143	1	165.38					1		AC068202, AC113175
S/G/Y/R/B/O	NT_004641	AC113175	59584468	1	WI-8824					1	197.90	1		AC068202, AC113175
S/G/Y/R/B/O	NT_004641	AC113175	59601831	1	RH71036	1	165.56					1		AC068202, AC113175
S/G/Y/R/B/O	NT_004641	AC113175	59601831	1	WI-16030					1	198.60	1		AC068202, AC113175
S/G/Y/R/B/O	NT_004641	AL445285	59696616	3	RH49246	1	168.60					1		AC009678, AL356572, AL445285
S/G/Y/R/B/O	NT_004641	AC097066	59696993	3
S/G/Y/R/B/O	NT_004641	AL603765	59930698	3	WI-4455					1	192.60	1		AC021913, AL603765
S/G/Y/R/B/O	NT_004641	AC026608	60021175	1
S/G/Y/R/B/O	NT_004641	AL603844	60063548	3	WI-5642					1	210.10	1	AC026608,	AC026608, AL355808, AL603844
S/G/Y/R/B/O	NT_004641	AL606803	60249335	3
S/G/Y/R/B/O	NT_004641	AC021696	60301374	1
S/G/Y/R/B/O	NT_004641	AC105276	60302300	1
S/G/Y/R/B/O	NT_004641	AC099792	60534866	3	D1S203					1	196.30	1	AC016857, AC058796, AL355795,	AC016857, AC058796, AC099792, AL355795
S/G/Y/R/B/O	NT_004641	AC099792	60534866	3	RH13236	1	169.82					1	AC016857, AC058796, AL355795,	AC016857, AC058796, AC099792, AL355795
S/G/Y/R/B/O	NT_004641	AC099792	60534866	3	RH802			1	3057.00			1	AC016857, AC058796, AL355795,	AC016857, AC058796, AC099792, AL355795
S/G/Y/R/B/O	NT_004641	AL355795	60588583	2	RH69275	1	171.13					1	AC016857,	AC016857, AL355795
S/G/Y/R/B/O	NT_004641	AL355795	60658890	2	RH50889	1	165.56			1	196.30	1	AC016857, AC096534,	AC016857, AC096534, AL355795
S/G/Y/R/B/O	NT_004641	AL355795	60658890	2	RH14402			1	3062.00			1	AC016857, AC096534,	AC016857, AC096534, AL355795
S/G/Y/R/B/O	NT_004641	AC096534	60785666	1	RH31571			1	3062.00			2	AC026025,	AC026025, AC096534, AL390054
S/G/Y/R/B/O	NT_004641		-		RH27073	1	167.30					1	AL157946, AL355487,	AL157946, AL355487
S/G/Y/R/B/O	NT_004641		-		RH30714			1	2881.00			1	AL354826,	AL354826
S/G/Y/R/B/O	NT_004641		-		RH69904	1	166.69					0	AL020995,	AL020995
S/G/Y/R/B/O	NT_004641		-		RH78685	1	165.46					0
S/G/Y/R/B/O	NT_004641		-		RH91248	1	165.56					0
S/G/Y/R/B/O	NT_004641		-		RH91557	1	165.66					0
S/G/Y/R/B/O	NT_004641		-		RH93233	1	166.69					0		AL138903
S/G/Y/R/B/O	NT_004641		-		RH93365	1	166.99					0