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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004671
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004671AL5963421852833573          
S/G/Y/R/B/O NT_004671AL5131751854417213RH926571650.15    1 AL513175
S/G/Y/R/B/O NT_004671AL3575661855542603RH492711646.97    1 AL357566
S/G/Y/R/B/O NT_004671AL3909571855895043          
S/G/Y/R/B/O NT_004671AL1369871857679293RH1037441650.15    1 AL136987
S/G/Y/R/B/O NT_004671AL1369871858340883RH8738  17508.00  1 AL136987
S/G/Y/R/B/O NT_004671AL1369871858343573RH114471646.97    1 AL136987
S/G/Y/R/B/O NT_004671AL1369871858344973RH644131650.15  1805.901 AL136987
S/G/Y/R/B/O NT_004671AL5961191858890213RH986341650.15    1 AL596119
S/G/Y/R/B/O NT_004671AL1364541859146823RH686421646.97    1 AL136454, AL357113
S/G/Y/R/B/O NT_004671AL0354071860663593RH498841650.15  1805.901 AL035407, AL357113, AL365316, L13391
S/G/Y/R/B/O NT_004671AL0354071860663623RH504621650.1517508.001805.901 AL035407, AL357113, AL365316, L13391
S/G/Y/R/B/O NT_004671AL0354071860664023RH1044841650.15    1 AL035407, AL357113, AL365316, L13391
S/G/Y/R/B/O NT_004671AL0354071860666433RH690111646.97    1 AL035407, AL357113, AL365316, L13391
S/G/Y/R/B/O NT_004671AL3593901862285213RH673321646.97    1AL136370, AL136370, AL358172, AL358172, AL359390
S/G/Y/R/B/O NT_004671AL1363701862409133AFMB330XE9    1805.901 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701862455573RH765501646.57    1 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701862671373RH638171646.97  1805.901 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701862692753RH919001646.97    1 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701862702493RH502361646.97  1805.901 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701863178913RH692261646.97    1 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701863246713RH751101646.87    1 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701863250683RH712331646.97    1 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701863395383RH693041646.97    1 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701863407943RH918121650.15    1 AL136370, AL358172
S/G/Y/R/B/O NT_004671AL1363701863523893RH507511648.5817508.001809.201 AL136370
S/G/Y/R/B/O NT_004671AL3908631864338103RH505161648.48  1805.901 AL390863
S/G/Y/R/B/O NT_004671AL3908631864654773RH670911648.48    1 AL390863
S/G/Y/R/B/O NT_004671AL1391331864984293RH38213  17499.00  1 AL139133
S/G/Y/R/B/O NT_004671AL1391331865058713RH643161650.77  1805.901 AL139133
S/G/Y/R/B/O NT_004671AL1391331865059393RH167041649.00    1 AL139133
S/G/Y/R/B/O NT_004671AL1391331865078823RH361271650.77    1 AL139133
S/G/Y/R/B/O NT_004671AL3588571865149693          
S/G/Y/R/B/O NT_004671AL1387781866300272          
S/G/Y/R/B/O NT_004671AL1601731867958843          
S/G/Y/R/B/O NT_004671AL3577931868272913          
S/G/Y/R/B/O NT_004671AL1600011869709213          
S/G/Y/R/B/O NT_004671AL1578371869984453WI-10636    1805.901 AL157837
S/G/Y/R/B/O NT_004671AL1580811871341683          
S/G/Y/R/B/O NT_004671AL1364561873515763D1S412    1807.101AL356272, AC015578, AL136456, AL356272
S/G/Y/R/B/O NT_004671AL1364561873515903RH134551650.2517538.00  1AL356272, AC015578, AL136456, AL356272
S/G/Y/R/B/O NT_004671AL3562721873526373          
S/G/Y/R/B/O NT_004671AL5911711874438163          
S/G/Y/R/B/O NT_004671AL1392141874550753          
S/G/Y/R/B/O NT_004671AL5133481875956303          
S/G/Y/R/B/O NT_004671AL5132261877322713          
S/G/Y/R/B/O NT_004671AL5922031877589883          
S/G/Y/R/B/O NT_004671 - RH645791643.33    1AL354771, AC011631, AL354771
S/G/Y/R/B/O NT_004671 - WI-2776    1803.601AC012581, AL391098, AC012581, AL391098
S/G/Y/R/B/O NT_004671 - RH644941649.83    1AL139135, AL139135


  NT_004671 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004671 - RH644871649.83    1AC012581, AL391098, AC012581, AL391098
S/G/Y/R/B/O NT_004671 - RH663931650.46    0