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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004636
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004636AC069172656833711          
S/G/Y/R/B/O NT_004636AL513493658160693          
S/G/Y/R/B/O NT_004636AL592285659798493          
S/G/Y/R/B/O NT_004636AL590783661556803RH642841177.63  1206.701 AL391359, AL590783
S/G/Y/R/B/O NT_004636AL591487662873183          
S/G/Y/R/B/O NT_004636AL357273663045323          
S/G/Y/R/B/O NT_004636AL109926663892683RH695721176.56    1 AL109926
S/G/Y/R/B/O NT_004636AL109926664856303RH645241177.10    1AL359701, AL109926, AL356736, AL359701
S/G/Y/R/B/O NT_004636AL359701664949053RH496221176.6113318.001205.301 AL359701
S/G/Y/R/B/O NT_004636AL359701664963523RH504861177.31  1205.501 AL359701
S/G/Y/R/B/O NT_004636AL356913666677053RH21501178.69  1207.301 AC016508, AL356913
S/G/Y/R/B/O NT_004636AL391820666877253          
S/G/Y/R/B/O NT_004636AL139147667918273SGC30800    1207.301 AL137158, AL139147
S/G/Y/R/B/O NT_004636AL139147667918273RH642411143.35    1 AL137158, AL139147
S/G/Y/R/B/O NT_004636AL354978668725571RH642361180.12  1207.301AC026063, AC026063, AL137158, AL137158, AL354978
S/G/Y/R/B/O NT_004636AL354978668957771RH508191182.23  1207.201AC026063, AC026063, AL354978
S/G/Y/R/B/O NT_004636AC026063668573781          
S/G/Y/R/B/O NT_004636AL592161669347133RH664911177.77    1AL354978, AL354978, AL592161
S/G/Y/R/B/O NT_004636AL139216670694793RH463911178.90    1 AL139216
S/G/Y/R/B/O NT_004636AL139216670723753RH645921179.42    1 AL139216
S/G/Y/R/B/O NT_004636AL139216670734483RH123031180.73    1 AL139216
S/G/Y/R/B/O NT_004636AL500525671078893RH645551180.73    1 AL500525
S/G/Y/R/B/O NT_004636AL500525671108563SGC32050    1206.901 AL500525
S/G/Y/R/B/O NT_004636AL500525671108563RH32296  13669.00  1 AL500525
S/G/Y/R/B/O NT_004636AL500525671108563RH121301179.42    1 AL500525
S/G/Y/R/B/O NT_004636AL500525671212023RH647691177.7313307.00  1 AL500525
S/G/Y/R/B/O NT_004636AL500525671221273RH464581143.87    1 AL500525
S/G/Y/R/B/O NT_004636AL133320671250553          
S/G/Y/R/B/O NT_004636AL109843672543003          
S/G/Y/R/B/O NT_004636AL389925674594863RH184261182.13    1AL358512, AC026054, AL358512, AL389925
S/G/Y/R/B/O NT_004636AL358512675178942RH759051178.09    1 AL358512
S/G/Y/R/B/O NT_004636AL358512675242912RH493871182.13    1 AL358512
S/G/Y/R/B/O NT_004636AL358512675242912RH31581  13676.00  1 AL358512
S/G/Y/R/B/O NT_004636AL358512675311672RH119871175.49    1 AL358512
S/G/Y/R/B/O NT_004636AL358512675322752RH38134  13622.00  1 AL358512
S/G/Y/R/B/O NT_004636AL358512675323282RH747771178.27    1 AL358512
S/G/Y/R/B/O NT_004636AL590559675328993RH1356  13676.00  1AL358512, AL358512, AL590559
S/G/Y/R/B/O NT_004636AL590559675331263RH471281179.83    1AL358512, AL358512, AL590559
S/G/Y/R/B/O NT_004636AL590559675332163RH471811178.90    2AC098657, AL358512, AC098657, AL358512, AL583833, AL590559
S/G/Y/R/B/O NT_004636AL359268676833143          
S/G/Y/R/B/O NT_004636AL139258676958403          
S/G/Y/R/B/O NT_004636AL136120678029343RH508081180.73  1207.301 AL136120, AL391871
S/G/Y/R/B/O NT_004636AL136120678096553RH690291179.42    1 AC046169, AL136120, AL391871, L24498
S/G/Y/R/B/O NT_004636AL136120678248703RH251501179.42    1 AC046169, AL136120, AL391871
S/G/Y/R/B/O NT_004636AL136120678261763RH941501179.42    1 AC046169, AL136120, AL391871
S/G/Y/R/B/O NT_004636AL136120678261883RH683441182.13    1 AC046169, AL136120, AL391871
S/G/Y/R/B/O NT_004636AL136120678310683WI-5552    1208.601 AC046169, AL136120, AL391871
S/G/Y/R/B/O NT_004636AL499611678964073          
S/G/Y/R/B/O NT_004636AL391703679086423RH30679  13637.00  1 AC046169, AL391703
S/G/Y/R/B/O NT_004636AL391703679103493RH498461177.31  1210.101 AC046169, AL391703, AL391871


  NT_004636 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004636AL391703679103493RH33230  13662.00  1 AC046169, AL391703, AL391871
S/G/Y/R/B/O NT_004636AL391703679402743RH700811179.29    1 AL391703
S/G/Y/R/B/O NT_004636AL391703679765483RH687451183.56    1 AL391703
S/G/Y/R/B/O NT_004636AL157407681677843RH638641184.45  1210.001 AF202543, AL157407
S/G/Y/R/B/O NT_004636AC010986682408541RH642041184.86  1210.601 AC010986
S/G/Y/R/B/O NT_004636AC010986682409591RH257091184.91    1 AC010986
S/G/Y/R/B/O NT_004636AC010986682422101RH258341184.86    1 AC010986, AL161795
S/G/Y/R/B/O NT_004636AC010986682472581RH171611191.64    1AL513284, AC010986, AL161795, AL513284
S/G/Y/R/B/O NT_004636AL513284682551703RH645181185.64    1AC010986, AC010986, AL161795, AL513284
S/G/Y/R/B/O NT_004636AL513284683639873AFM316VB5    1211.101AC010986, AC010986, AL513284
S/G/Y/R/B/O NT_004636 - RH1045591184.96    0  
S/G/Y/R/B/O NT_004636 - WI-5642    1210.101AC026608, AL603844, AC026608, AL355808, AL603844
S/G/Y/R/B/O NT_004636 - RH690421179.42    1AP000832, AP000843, AP000912, AP000832, AP000843, AP000912