Chromosome 1 - RH Maps - Single Contig

Chromosome 1 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_029218

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_029218	AP003159	17833292	3
S/G/Y/R/B/O	NT_029218	AL080251	17854531	2	RH15876	1	72.65					1	AP003159,	AL080251, AP003159
S/G/Y/R/B/O	NT_029218	AL080251	17855816	2	RH2473	1	70.44			1	66.40	1	AP003159,	AL080251, AP003159
S/G/Y/R/B/O	NT_029218	AL080251	17855906	2	RH415			1	1137.00			1	AP003159,	AL080251, AP003159
S/G/Y/R/B/O	NT_029218	AL080251	17890708	2	CHLC.GGAT2A07.1031					1	66.50	1	AP003159,	AL080251, AP003159
S/G/Y/R/B/O	NT_029218	AL139283	17937637	3
S/G/Y/R/B/O	NT_029218	AL137127	18024758	3	RH44227	1	72.75					1		AL137127
S/G/Y/R/B/O	NT_029218	AL357564	18163649	3	RH104366	1	70.84					1		AL357564
S/G/Y/R/B/O	NT_029218	AL357564	18166103	3	RH47859	1	70.84					1		AL357564, AL360017
S/G/Y/R/B/O	NT_029218	AL035413	18168336	3	RH63912	1	72.65			1	66.50	1		AL035413
S/G/Y/R/B/O	NT_029218	AL035413	18169201	3	WI-14328					1	66.50	1		AL035413
S/G/Y/R/B/O	NT_029218	AL035413	18169201	3	RH64345	1	77.61					1		AL035413
S/G/Y/R/B/O	NT_029218	AL035413	18190545	3	RH76111	1	62.31					1		AL035413, AL360017
S/G/Y/R/B/O	NT_029218	AL035413	18209359	3	RH50456	1	72.75			1	66.50	1		AL035413
S/G/Y/R/B/O	NT_029218	AL035413	18252954	3	RH75547	1	73.55					1		AL035413
S/G/Y/R/B/O	NT_029218	AL035413	18254249	3	RH63893	1	74.02			1	68.20	1		AL035413, AL360017
S/G/Y/R/B/O	NT_029218	AL035413	18254294	3	RH64507	1	75.38					1		AL035413, AL360017
S/G/Y/R/B/O	NT_029218	AL035413	18289603	3	RH1209			1	1144.00			1	AC026576,	AC026576, AL035413, AL360017
S/G/Y/R/B/O	NT_029218	AL445163	18342496	3	RH103414	1	75.38					1	AC026576,	AC026576, AL445163
S/G/Y/R/B/O	NT_029218	AL359199	18418526	3	RH45268	1	75.38					1	AC026576,	AC026576, AL359199
S/G/Y/R/B/O	NT_029218	AL359199	18517493	3	WI-5273					1	64.20	1		AL359199
S/G/Y/R/B/O	NT_029218	AL031727	18558668	3	RH44960	1	78.48					1	AP003160,	AL031727, AP003160
S/G/Y/R/B/O	NT_029218	AL031727	18576644	3	RH64694	1	72.75					1	AP003160,	AL031727, AP003160
S/G/Y/R/B/O	NT_029218	AL031727	18579837	3	RH11996	1	72.75					1	AP003160,	AL031727, AP003160
S/G/Y/R/B/O	NT_029218	AL031727	18579912	3	RH50125	1	72.75			1	66.50	1	AP003160,	AL031727, AP003160
S/G/Y/R/B/O	NT_029218	AL031727	18580739	3	RH13225	1	70.60	1	1162.00			1	AP003160,	AL031727, AP003160
S/G/Y/R/B/O	NT_029218	AL031727	18608340	3	RH68284	1	85.21					1	AP003160,	AL031727, AP003160, D89013
S/G/Y/R/B/O	NT_029218	AL031727	18608357	3	RH68234	1	72.75					1	AP003160,	AP003160, D89013
S/G/Y/R/B/O	NT_029218	AL031727	18629609	3	RH12339	1	72.65					1	AP003160,	AL031727, AP003160
S/G/Y/R/B/O	NT_029218	AL031727	18630978	3	WI-9600					1	66.50	1	AP003160,	AL031727, AP003160
S/G/Y/R/B/O	NT_029218	AL031727	18630978	3	RH63944	1	74.17					1	AP003160,	AL031727, AP003160
S/G/Y/R/B/O	NT_029218	AP003160	18644657	3
S/G/Y/R/B/O	NT_029218	AC026576	18649024	1
S/G/Y/R/B/O	NT_029218		-		RH101990	1	72.65					0
S/G/Y/R/B/O	NT_029218		-		WI-3090					1	66.40	0
S/G/Y/R/B/O	NT_029218		-		RH104564	1	72.75					0
S/G/Y/R/B/O	NT_029218		-		RH63771	1	72.75					0	AL021528,	AL021528, AL357521, AL512322, AL513545
S/G/Y/R/B/O	NT_029218		-		RH67949	1	71.55					2	AL034395, AL360012, AL513497, AL714002,	AL034395, AL360012, AL513497, AL714002
S/G/Y/R/B/O	NT_029218		-		RH71188	1	72.75					0
S/G/Y/R/B/O	NT_029218		-		RH78306	1	70.84					0
S/G/Y/R/B/O	NT_029218		-		RH93486	1	72.75					0