Chromosome 1 - RH Maps - Single Contig

Chromosome 1 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_030577

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_030577	AL713889	146605151	1	RH68403	1	552.61					1		AF190631, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146605159	1	RH99065	1	555.98					1		AF190631, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146630697	1	RH71309	1	538.90					1		AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146630699	1	RH41891	1	557.59					1		AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146716978	1	RH64385	1	552.65					1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146716978	1	WI-17491					1	677.70	1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146717096	1	RH64248	1	557.59					1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146717096	1	WI-15073					1	672.30	1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146717347	1	RH26289	1	558.07					1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146717584	1	RH64552	1	552.61					1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146717802	1	RH2002			14	1054.00			1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146717954	1	RH12842	1	555.98					1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL713889	146717994	1	RH70555	1	554.37					1	AL592150,	AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL592150	146641290	1	RH71337	1	555.98					2	AL162258,	AL162258, AL592150, J02763
S/G/Y/R/B/O	NT_030577	AL592150	146641682	1	RH11047	1	552.50					2	AL162258,	AL162258, AL592150, J02763
S/G/Y/R/B/O	NT_030577	AL592150	146644691	1	RH74911	1	554.06					2	AL162258,	AL162258, AL592150, J02763
S/G/Y/R/B/O	NT_030577	AL592150	146651123	1	RH70249	1	555.98					2	AL162258,	AL162258, AL592150
S/G/Y/R/B/O	NT_030577	AL592150	146682041	1	RH91554	1	555.98					2	AL162258, AL713889,	AL162258, AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL592150	146687548	1	RH75969	1	558.00					2	AL162258, AL713889,	AL162258, AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL592150	146701173	1	RH49848	1	552.61					2	AL162258, AL713889,	AL162258, AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL592150	146701173	1	WI-21724					1	672.90	2	AL162258, AL713889,	AL162258, AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL592150	146701266	1	RH35847	1	555.98					2	AL162258, AL713889,	AL162258, AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL592150	146701718	1	RH78045	1	552.50					2	AL162258, AL713889,	AL162258, AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL592150	146701778	1	RH76657	1	538.71					2	AL162258, AL713889,	AL162258, AL592150, AL713889
S/G/Y/R/B/O	NT_030577	AL513523	146757661	3	RH64254	1	554.27					1	AL713889,	AL513523, AL713889
S/G/Y/R/B/O	NT_030577	AL513523	146757661	3	WI-15199					1	669.80	1	AL713889,	AL513523, AL713889
S/G/Y/R/B/O	NT_030577	AL513523	146782809	3	RH80662	1	554.06					1	AL713889,	AL513523, AL713889
S/G/Y/R/B/O	NT_030577	AL513523	146783545	3	RH36580	1	554.37					1	AL713889,	AL513523, AL713889
S/G/Y/R/B/O	NT_030577	AL513523	146783602	3	RH16708	1	555.98					1	AL713889,	AL513523, AL713889
S/G/Y/R/B/O	NT_030577	AL513523	146788144	3	RH94084	1	538.90					1	AL713889,	AL513523, AL713889
S/G/Y/R/B/O	NT_030577		-		RH18505	1	555.98					0	AL513523,	AL513523
S/G/Y/R/B/O	NT_030577		-		RH70973	1	554.27					0	AL592150,	AL592150, Z18950
S/G/Y/R/B/O	NT_030577		-		RH70991	1	555.98					0