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Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_032971
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032971AC092815429001633RH14018  12362.00  1 AC011772, AC092815
S/G/Y/R/B/O NT_032971AC092815429013593RH709591125.97    1 AC011772, AC092815
S/G/Y/R/B/O NT_032971AL451062429628233          
S/G/Y/R/B/O NT_032971AC005193429832463SGC34395    1145.401AL451062, AC005193, AC011772, AL451062
S/G/Y/R/B/O NT_032971AC005193429832463RH498301131.75    1AL451062, AC005193, AC011772, AL451062
S/G/Y/R/B/O NT_032971AC005193429833023RH358861133.01    1AL451062, AC005193, AC011772, AL451062
S/G/Y/R/B/O NT_032971AC005193430437783D1S211    1149.401AL451062, AC005193, AL451062
S/G/Y/R/B/O NT_032971AC004950431105203RH32551  12372.00  1 AC004950, AL592548
S/G/Y/R/B/O NT_032971AC004950431105203SGC32893    1145.201 AC004950, AL592548
S/G/Y/R/B/O NT_032971AC004950431105203RH644241129.98    1 AC004950, AL592548
S/G/Y/R/B/O NT_032971AC004950431106383RH475241135.27    1 AC004950, AL592548
S/G/Y/R/B/O NT_032971AC005038432082433RH461761130.18    1AC005051, AC005038, AC005051, AL357079
S/G/Y/R/B/O NT_032971AC005038432220023RH682411139.31    1AC005051, AC005038, AC005051, AL357079
S/G/Y/R/B/O NT_032971AC005038432450153RH418901132.23    1AC005051, AC005038, AC005051, AL357079
S/G/Y/R/B/O NT_032971AC005038432453173RH38074  12390.00  1AC005051, AC005038, AC005051, AL357079
S/G/Y/R/B/O NT_032971AC005038432557143WI-12863    1145.501 AC005038, AL357079
S/G/Y/R/B/O NT_032971AC005038432557143RH502721131.85    1 AC005038, AL357079
S/G/Y/R/B/O NT_032971AC005038432685013RH127711132.17    1AL139220, AC005038, AL139220, AL357079
S/G/Y/R/B/O NT_032971AC005038432738723RH786921129.98    1AL139220, AC005038, AL139220, AL357079
S/G/Y/R/B/O NT_032971AL139220433820843RH479901125.97    1 AC005087, AL139220
S/G/Y/R/B/O NT_032971AL356653433960583          
S/G/Y/R/B/O NT_032971AL359839434102423          
S/G/Y/R/B/O NT_032971AC005051434409911          
S/G/Y/R/B/O NT_032971 - RH1939  12377.00  1AL136373, AL136373, AL357392
S/G/Y/R/B/O NT_032971 - RH33535  12362.00  0 AL355519, AL512786, AL583862
S/G/Y/R/B/O NT_032971 - RH37714  12377.00  1AL135960, AJ131016, AL135960, AL390073
S/G/Y/R/B/O NT_032971 - RH38054  12377.00  1AC022754, AL607122, AC022754, AL513319, AL607122