Chromosome 1 - RH Maps - Single Contig

Chromosome 1 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_004488

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_004488	AC025001	11116896	1	RH67330	1	47.65					1		AC025001, AF260233
S/G/Y/R/B/O	NT_004488	AC025001	11125326	1	RH63770	1	49.07					1		AC025001
S/G/Y/R/B/O	NT_004488	AC025001	11126424	1	RH64189	1	49.07					1		AC025001
S/G/Y/R/B/O	NT_004488	AC025001	11140616	1	RH50356	1	51.21	1	556.00			1		AC025001
S/G/Y/R/B/O	NT_004488	AC025001	11140616	1	SGC35004					1	42.20	1		AC025001
S/G/Y/R/B/O	NT_004488	AC025001	11140680	1	RH44595	1	49.58					1		AC025001
S/G/Y/R/B/O	NT_004488	AL021155	11171003	3	RH70928	1	51.31					1		AL021155
S/G/Y/R/B/O	NT_004488	AL021155	11171103	3	RH70254	1	51.31					1	AC025001,	AC025001, AL021155
S/G/Y/R/B/O	NT_004488	AL021155	11174001	3	RH80468	1	51.31					1	AC025001,	AC025001, AL021155, K02043, X01471
S/G/Y/R/B/O	NT_004488	AL021155	11174086	3	RH76218	1	51.31					1	AC025001,	AC025001, AL021155, K02043
S/G/Y/R/B/O	NT_004488	AL021155	11186916	3	GCT3H01					1	43.50	1	AC025001,	AC025001, AL021155
S/G/Y/R/B/O	NT_004488	AL021155	11189074	3	RH31550			1	563.00			1	AC025001,	AC025001, AL021155
S/G/Y/R/B/O	NT_004488	AL021155	11247893	3	RH25747	1	51.31					1	AC025001,	AC025001, AL021155
S/G/Y/R/B/O	NT_004488	AL096840	11303531	3	RH14617			1	563.00			1		AL096840
S/G/Y/R/B/O	NT_004488	AL096840	11303635	3	RH11431	1	51.31					1		AL096840
S/G/Y/R/B/O	NT_004488	AL096840	11341140	3	RH1192			1	563.00			1		AL096840
S/G/Y/R/B/O	NT_004488	AL096840	11341511	3	RH12722	1	51.31					1		AL096840
S/G/Y/R/B/O	NT_004488	AL096840	11341571	3	RH10731	1	51.41					1		AL096840
S/G/Y/R/B/O	NT_004488	AL096840	11360015	3	RH91641	1	51.31					1		AL096840
S/G/Y/R/B/O	NT_004488	AL357835	11470816	3	RH50799	1	51.31					1		AC023251, AJ289159, AL355998, AL357835
S/G/Y/R/B/O	NT_004488	AL357835	11470816	3	RH8732			1	629.00			1		AC023251, AJ289159, AL355998, AL357835
S/G/Y/R/B/O	NT_004488	AL357835	11470816	3	UTR-9861					1	49.30	1		AC023251, AJ289159, AL355998, AL357835
S/G/Y/R/B/O	NT_004488	AL357835	11471854	3	RH11723	1	51.31					1		AC023251, AJ289159, AL355998, AL357835
S/G/Y/R/B/O	NT_004488	AL031276	11535390	3	RH50369	1	51.31					1		AC023251, AL031276, AL355998, U52165
S/G/Y/R/B/O	NT_004488	AL031276	11535390	3	RH14635			1	624.00	1	50.00	1		AC023251, AL031276, AL355998, U52165
S/G/Y/R/B/O	NT_004488	AL031276	11535400	3	RH63769	1	51.31					1		AC023251, AL031276, AL355998, U52165
S/G/Y/R/B/O	NT_004488	AL031276	11600421	3	RH13527	1	51.31	1	590.00			1		AC023251, AL031276
S/G/Y/R/B/O	NT_004488	AL031276	11632463	3	WI-4880					1	49.20	1		AL031276
S/G/Y/R/B/O	NT_004488	AL031276	11638692	3	RH91951	1	51.31					1	AL445229,	AL031276, AL445229
S/G/Y/R/B/O	NT_004488	AL445229	11639900	3
S/G/Y/R/B/O	NT_004488		-		RH11824	1	51.31					0
S/G/Y/R/B/O	NT_004488		-		RH14815			1	598.00			1	AL137798, AL713858,	AL137798, AL354666, AL355800, AL356581, AL392186, AL590643, AL590643, AL713858
S/G/Y/R/B/O	NT_004488		-		RH50867	1	51.31					0
S/G/Y/R/B/O	NT_004488		-		RH71349	1	51.21					0