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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004538
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004538AL645729278974471RH64766195.57    1AC022766, AC022766, AL645729
S/G/Y/R/B/O NT_004538AL645729279100801RH11730195.57    1AC022766, AC022766, AL645729
S/G/Y/R/B/O NT_004538AL645729279137151RH27127190.53    1AC022766, AC022766, AL645729
S/G/Y/R/B/O NT_004538AL645729279144891WI-12302    196.101AC022766, AC022766, AL645729
S/G/Y/R/B/O NT_004538AL645729279144891RH63899193.17    1AC022766, AC022766, AL645729
S/G/Y/R/B/O NT_004538AL645729279147431RH17235195.57    1AC022766, AC022766, AL645729
S/G/Y/R/B/O NT_004538AL360012276796681RH75107194.63    1 AL360012
S/G/Y/R/B/O NT_004538AL513497277038332RH63774195.40    1AL360012, AL360012, AL513497
S/G/Y/R/B/O NT_004538AL513497277060332RH67527195.57    1AL360012, AL360012, AL513497, D00591
S/G/Y/R/B/O NT_004538AL513497277070512SGC32496    194.501AL360012, AL360012, AL513497, D00591
S/G/Y/R/B/O NT_004538AL513497277070512RH32432  11780.00  1AL360012, AL360012, AL513497, D00591
S/G/Y/R/B/O NT_004538AL513497277071932RH68391195.57    1AL360012, AL360012, AL513497, D00591
S/G/Y/R/B/O NT_004538AL513497277356172RH103048195.57    1AL360012, AL714002, AL360012, AL513497, AL714002, D00591
S/G/Y/R/B/O NT_004538AL513497277741622TIGR-A003P24    192.301AL360012, AL714002, AL360012, AL513497, AL714002
S/G/Y/R/B/O NT_004538AL513497277741622RH64460190.53    1AL360012, AL714002, AL360012, AL513497, AL714002
S/G/Y/R/B/O NT_004538AL513497277776932RH36555194.68    1AL360012, AL714002, AL360012, AL513497, AL714002
S/G/Y/R/B/O NT_004538AL513497277780462RH77841190.53    1AL360012, AL714002, AL360012, AL513497, AL714002
S/G/Y/R/B/O NT_004538AL513497277997342SGC30964    192.301AL360012, AL714002, AL360012, AL513497, AL714002
S/G/Y/R/B/O NT_004538AL513497277997342RH50749190.53    1AL360012, AL714002, AL360012, AL513497, AL714002
S/G/Y/R/B/O NT_004538AL513497277998532RH67949171.55    2AL034395, AL360012, AL714002, AL034395, AL360012, AL513497, AL714002
S/G/Y/R/B/O NT_004538AL714002278505941          
S/G/Y/R/B/O NT_004538AC022766278644661          
S/G/Y/R/B/O NT_004538AL356786279860483RH668501485.57    1AC022766, AL645729, AC022766, AL356786, AL645729
S/G/Y/R/B/O NT_004538AL009181281515463RH46409192.76    1 AC021602, AC023527, AL009181
S/G/Y/R/B/O NT_004538AL138785281754723          
S/G/Y/R/B/O NT_004538AL357500283339353RH68503195.57    1 AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL357500283358253RH104511190.93    1 AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL357500283366683RH98235192.76    1 AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL357500283366803RH104523192.76    1 AL357500
S/G/Y/R/B/O NT_004538AL357500283647343WI-9232    194.501 AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL357500283647343RH49602193.17    1 AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL357500283649733RH17621192.76    1 AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL357500283852673RH50550195.57  196.701 AC004236, AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL357500283852673RH16613195.57    1 AC004236, AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL357500283892973RH67647194.37    1 AC004236, AC025145, AL354986, AL357500, AL513012
S/G/Y/R/B/O NT_004538AL590729284089293RH44244192.76    1 AC004236, AC025145, AL590729
S/G/Y/R/B/O NT_004538AL590729284107013RH36561195.57    1 AC004236, AC025145, AL513012, AL590729
S/G/Y/R/B/O NT_004538AL590729284107223RH76602194.68    1 AC004236, AC025145, AL513012, AL590729
S/G/Y/R/B/O NT_004538AL590729284278083RH104226192.97    1 AC025145, AL513012, AL590729
S/G/Y/R/B/O NT_004538AL645859284626473          
S/G/Y/R/B/O NT_004538AL049570285434443WI-6290    194.501AL671862, AL049570, AL671862
S/G/Y/R/B/O NT_004538AL049570285434443RH63925193.17    1AL671862, AL049570, AL671862
S/G/Y/R/B/O NT_004538AL049570285434483RH10716195.57    1AL671862, AL049570, AL671862
S/G/Y/R/B/O NT_004538AL139151286631803WI-3870    198.901AL671862, AL139151, AL671862
S/G/Y/R/B/O NT_004538AL671862286976752          
S/G/Y/R/B/O NT_004538 - D1S449    192.901AL021921, AL021921, U95738
S/G/Y/R/B/O NT_004538 - WI-3615    192.900  
S/G/Y/R/B/O NT_004538 - D1S470    192.901AC015478, AC092265, AC015478, AC092265
S/G/Y/R/B/O NT_004538 - SGC33625    197.301AC004873, AL356390, AC004873, AL356390