Chromosome 1 - RH Maps - Single Contig

Chromosome 1 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_004321

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_004321	AL592464	2641725	1
S/G/Y/R/B/O	NT_004321	AL589702	2756218	2
S/G/Y/R/B/O	NT_004321	AL356984	2863321	3
S/G/Y/R/B/O	NT_004321	AL008733	2930149	3	RH12748	1	15.89					1		AL008733
S/G/Y/R/B/O	NT_004321	AL008733	2930151	3	RH63850	1	15.89			1	13.90	1		AL008733
S/G/Y/R/B/O	NT_004321	AL008733	2931338	3	RH36086	1	15.89					1		AL008733
S/G/Y/R/B/O	NT_004321	AL512383	3040818	3
S/G/Y/R/B/O	NT_004321	AL590438	3083153	3
S/G/Y/R/B/O	NT_004321	AL354743	3276612	3	RH45861	1	12.85					1		AL354743
S/G/Y/R/B/O	NT_004321	AL512413	3351053	3	RH75821	1	9.45					1		AL359826, AL512413
S/G/Y/R/B/O	NT_004321	AL512413	3358495	3	RH71119	1	17.62					1		AL512413
S/G/Y/R/B/O	NT_004321	AL512413	3358496	3	RH65952	1	17.62					1		AL512413
S/G/Y/R/B/O	NT_004321	AL513320	3395111	3	RH48868	1	12.95					1	AL512413,	AL359826, AL512413, AL513320
S/G/Y/R/B/O	NT_004321	AL513320	3500466	3	RH17152	1	17.52					1		AL513320
S/G/Y/R/B/O	NT_004321	AL513320	3501400	3	RH93413	1	17.62					1	AL136528,	AL136528, AL513320
S/G/Y/R/B/O	NT_004321	AL136528	3517606	3	RH32465			1	815.00			1		AL136528
S/G/Y/R/B/O	NT_004321	AL136528	3538831	3	RH13601	1	17.52					1		AL136528
S/G/Y/R/B/O	NT_004321	AL136528	3538831	3	RH411			1	96.00			1		AL136528
S/G/Y/R/B/O	NT_004321	AL136528	3606330	3	RH69438	1	17.52					1		AL136528, AL390734
S/G/Y/R/B/O	NT_004321	AL136528	3606517	3	RH68672	1	17.52					1		AL136528, AL390734
S/G/Y/R/B/O	NT_004321	AL136528	3606634	3	RH67161	1	17.52					1		AL136528, AL390734
S/G/Y/R/B/O	NT_004321	AL136528	3607786	3	RH48939	1	17.52					1		AL136528, AL390734
S/G/Y/R/B/O	NT_004321	AL136528	3627552	3	RH104015	1	11.32					1	AL691523,	AL136528, AL390734, AL691523
S/G/Y/R/B/O	NT_004321	AL365330	3646362	3	RH76499	1	9.35					1	AL691523,	AL365330, AL390734, AL691523
S/G/Y/R/B/O	NT_004321	AL365330	3648101	3	RH98454	1	17.62					1	AL691523,	AL365330, AL390734, AL691523
S/G/Y/R/B/O	NT_004321	AL365330	3651510	3	RH36221	1	17.52					1	AL691523,	AL365330, AL390734, AL691523
S/G/Y/R/B/O	NT_004321	AL365330	3651675	3	RH67525	1	17.52					1	AL691523,	AL365330, AL390734, AL691523
S/G/Y/R/B/O	NT_004321	AL365330	3699874	3	RH47124	1	11.63					1	AL691523,	AL365330, AL390734, AL691523
S/G/Y/R/B/O	NT_004321	AL691523	3755396	1	RH78144	1	9.66					1		AL691523
S/G/Y/R/B/O	NT_004321	AL691523	3759060	1	RH64257	1	19.35			1	16.00	1		AL691523
S/G/Y/R/B/O	NT_004321	AL691523	3759060	1	RH14428			1	209.00			1		AL691523
S/G/Y/R/B/O	NT_004321		-		RH104558	1	15.94					0
S/G/Y/R/B/O	NT_004321		-		RH67820	1	17.52					0
S/G/Y/R/B/O	NT_004321		-		RH91403	1	15.94					0