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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004771
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004771AC0695912354504541          
S/G/Y/R/B/O NT_004771AL5132092354586243WI-3538    1915.101 AL158845, AL513209
S/G/Y/R/B/O NT_004771AL5838252355275422          
S/G/Y/R/B/O NT_004771AL5961072357243363          
S/G/Y/R/B/O NT_004771AL6719852357543121          
S/G/Y/R/B/O NT_004771AL6065032357581783          
S/G/Y/R/B/O NT_004771AL5901352359012823          
S/G/Y/R/B/O NT_004771AC0934262359767093          
S/G/Y/R/B/O NT_004771AL5131892361438093          
S/G/Y/R/B/O NT_004771AL6273882362175981AFM211YH4    1918.801 AC099564, AL627388
S/G/Y/R/B/O NT_004771AC0159012362678611          
S/G/Y/R/B/O NT_004771AL3574992364321913RH663641746.13    1AC015901, AC015901, AL357499
S/G/Y/R/B/O NT_004771AL3574992364323143RH648571746.13    1AC015901, AC015901, AL357499
S/G/Y/R/B/O NT_004771AL3574992364686673WI-5908    1918.801AC015901, AC015901, AL357499
S/G/Y/R/B/O NT_004771AL5135432365740103RH639381746.13    1AC011141, AC015901, AC011141, AC015901, AL513543
S/G/Y/R/B/O NT_004771AL5135432365740103RH269831746.13    1AC011141, AC015901, AC011141, AC015901, AL513543
S/G/Y/R/B/O NT_004771AL5135432365740843RH184901746.13    1AC011141, AC015901, AC011141, AC015901, AL513543
S/G/Y/R/B/O NT_004771AC1044602367048881WI-10464    1916.401AC011141, AC013517, AC011141, AC013517, AC104460
S/G/Y/R/B/O NT_004771AC0135172366114981          
S/G/Y/R/B/O NT_004771AC0111412367585631          
S/G/Y/R/B/O NT_004771AL3563612367746302RH100861746.13    1 AL356361, U29589
S/G/Y/R/B/O NT_004771AL3563612367766562RH697611746.13    1 AL356361
S/G/Y/R/B/O NT_004771AL3563612367806892RH643661746.34  1918.701 AL356361
S/G/Y/R/B/O NT_004771AL3599182370091301RH703761747.07    1AC078797, AC078797
S/G/Y/R/B/O NT_004771AC0217922370556461          
S/G/Y/R/B/O NT_004771AC0207262370573531          
S/G/Y/R/B/O NT_004771AL5133422370995613          
S/G/Y/R/B/O NT_004771AL5904902372267693          
S/G/Y/R/B/O NT_004771AL6460162372765393          
S/G/Y/R/B/O NT_004771AL3581762373630283RH646381747.70    1 AL356105, AL358176
S/G/Y/R/B/O NT_004771AL3581762373630303RH683231747.70    1 AL356105, AL358176
S/G/Y/R/B/O NT_004771AL3581762373631933RH503941747.07  1918.201 AL356105, AL358176
S/G/Y/R/B/O NT_004771AL3581762374165023RH928201747.70    1 AL358176
S/G/Y/R/B/O NT_004771AL5909652375868393RH493731746.3419319.00  1 AL590965, AL596206
S/G/Y/R/B/O NT_004771AL3651842376318932RH4457215147.15    2AC012652, AC012652
S/G/Y/R/B/O NT_004771AL3651842376490242RH642311746.02  1918.101 AL365184
S/G/Y/R/B/O NT_004771AL3651842376490242RH126501746.13    1 AL365184
S/G/Y/R/B/O NT_004771AL3651842377653892WI-4866    1918.101 AC021359, AC022067, AL365184
S/G/Y/R/B/O NT_004771AL5960822377746803          
S/G/Y/R/B/O NT_004771AL5906822378036833RH644471749.03  1919.601 AC021359, AC022067, AL590682
S/G/Y/R/B/O NT_004771AL5123072379986372RH134461750.4419344.00  1 AL512307, AL590437
S/G/Y/R/B/O NT_004771AL5920762381260823          
S/G/Y/R/B/O NT_004771AL3597642383163683RH22771750.44  1921.201 AL359764
S/G/Y/R/B/O NT_004771AL3597642383163683RH1123  19349.00  1 AL359764
S/G/Y/R/B/O NT_004771AL3597642383710973RH1290  19349.00  1 AL359764
S/G/Y/R/B/O NT_004771AL3597642383711253RH644851752.13    1 AL359764
S/G/Y/R/B/O NT_004771AL6064762383793813          
S/G/Y/R/B/O NT_004771AL5918982383862293AFM214XE11    1922.801 AL591898
S/G/Y/R/B/O NT_004771AL1333902384654373RH33140  19354.001922.801 AL133390
S/G/Y/R/B/O NT_004771AL1333902384654373RH643801753.76    1 AL133390


  NT_004771 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004771AL1333902384654533RH264791750.44    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902384660703CHLC.GATA4A09.519    1932.001 AL133390
S/G/Y/R/B/O NT_004771AL1333902384666653RH271901752.54    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902384670713RH711271752.34    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902384670883RH119501750.44    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902384687663RH497991750.44  1921.201 AL133390
S/G/Y/R/B/O NT_004771AL1333902384687663RH711001750.44    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902384704723RH644541750.4419354.001921.201 AL133390
S/G/Y/R/B/O NT_004771AL1333902385025513RH110331750.44    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902385026043RH472621750.44    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902385068263RH991491750.44    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902385070863RH502671750.44  1921.201 AL133390
S/G/Y/R/B/O NT_004771AL1333902385070863RH362851750.44    1 AL133390
S/G/Y/R/B/O NT_004771AL1333902385070903RH9032  19354.00  1 AL133390
S/G/Y/R/B/O NT_004771AL5918972385211583          
S/G/Y/R/B/O NT_004771 - RH713321745.18    0  
S/G/Y/R/B/O NT_004771 - RH34680  19354.00  0  
S/G/Y/R/B/O NT_004771 - RH932461750.44    0