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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_031724
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_031724AC025492445535861          
S/G/Y/R/B/O NT_031724AL359540445620292RH930  12434.00  1 AL359540
S/G/Y/R/B/O NT_031724AL359540445968522RH31566  12444.00  1 AL359540
S/G/Y/R/B/O NT_031724AL359540446141112RH182951130.29    1 AL359540
S/G/Y/R/B/O NT_031724AL359540446143282RH686521130.39    1 AL359540
S/G/Y/R/B/O NT_031724AL359540446143442SGC31961    1169.601 AL359540
S/G/Y/R/B/O NT_031724AL451136447643933RH1190  12454.00  1AC025492, AC025492, AL356673, AL451136
S/G/Y/R/B/O NT_031724AL451136447805613RH479841142.50    1AC025492, AC025492, AL356673, AL451136
S/G/Y/R/B/O NT_031724AL451136447810693RH32759  12440.00  1AC025492, AC025492, AL356673, AL451136
S/G/Y/R/B/O NT_031724AL451136447812053RH696511130.39    1AC025492, AC025492, AL356673, AL451136
S/G/Y/R/B/O NT_031724AL451136447815133RH13960  12438.00  1AC025492, AC025492, AL356673, AL451136
S/G/Y/R/B/O NT_031724AL451136447815543RH263571130.49    1AC025492, AC025492, AL356673, AL451136
S/G/Y/R/B/O NT_031724AL451136447893983RH70158953.75    2AC025492, AC025492, AL356673, AL451136
S/G/Y/R/B/O NT_031724AL355480448214663RH487281143.46    1 AL355480
S/G/Y/R/B/O NT_031724AL355480448905063RH767381130.70    1 AL355480
S/G/Y/R/B/O NT_031724AL355480448905103RH697281131.50    1 AL355480
S/G/Y/R/B/O NT_031724AL604028448979573RH8593  12438.00  1 AL604028
S/G/Y/R/B/O NT_031724AL604028448979573RH647671130.39    1 AL604028
S/G/Y/R/B/O NT_031724AL604028448987433RH126671142.61    1 AL604028
S/G/Y/R/B/O NT_031724AL604028449180773RH454551142.50    1 AL604028
S/G/Y/R/B/O NT_031724AL604028449199203RH643381143.20  1153.701 AL604028
S/G/Y/R/B/O NT_031724AL603882449641822RH14622  12437.00  1 AL603882
S/G/Y/R/B/O NT_031724AL603888450667693          
S/G/Y/R/B/O NT_031724AL645480452325743RH508221143.35  1154.401 AL645480
S/G/Y/R/B/O NT_031724AL645480452386433RH693621143.98    1 AL645480
S/G/Y/R/B/O NT_031724AL645480452433993RH667511145.09    1 AL645480
S/G/Y/R/B/O NT_031724AL358075452727393RH678341144.36    1AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075452728793RH506071144.08    1AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075452728793WI-21964    1169.601AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075452728793RH32374  12440.00  1AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075452730483RH472231143.98    1AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075452773053RH670291143.46    1AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075452781483SGC34472    1159.201AL672043, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075452781483RH497821143.87    1AL672043, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075452782313RH164841143.87    1AL672043, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075453247053RH366971144.08    1AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075453259423RH271821144.08    1AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL358075453717803RH931181144.04    1AC053512, AL672043, AC053512, AL358075, AL672043
S/G/Y/R/B/O NT_031724AL672043454225741RH678291144.08    1AC053512, AC053512, AL360086, AL672043
S/G/Y/R/B/O NT_031724AL672043454257741RH122091143.77    1AC053512, AC053512, AL672043
S/G/Y/R/B/O NT_031724AL672043454257741RH461911143.46    1AC053512, AC053512, AL360086, AL672043
S/G/Y/R/B/O NT_031724AC053512454671961          
S/G/Y/R/B/O NT_031724 - RH469551142.93    1AC005392, AC005392, U04325
S/G/Y/R/B/O NT_031724 - RH32343  12454.00  2AC024468, AL592207, AL691471, AC024468, AL592207, AL683889, AL691471
S/G/Y/R/B/O NT_031724 - RH642411143.35    1AL139147, AL137158, AL139147
S/G/Y/R/B/O NT_031724 - RH32897  12440.00  1AL358794, AL358794
S/G/Y/R/B/O NT_031724 - RH702201142.72    0AL139220, AL139220
S/G/Y/R/B/O NT_031724 - RH704671142.82    1AC098484, AC098484
S/G/Y/R/B/O NT_031724 - RH712461143.04    0  
S/G/Y/R/B/O NT_031724 - RH713941142.82    0AC016521, AC022182, AC016521, AC022182


  NT_031724 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_031724 - RH780331143.46    0  
S/G/Y/R/B/O NT_031724 - RH986431142.61    0