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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004908
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_004908AL3563232248506893RH919931718.55    1 AL356323
S/G/Y/R/B/O NT_004908AL3602692248598102          
S/G/Y/R/B/O NT_004908AL1363792250977843RH796471720.47    1 AL136379
S/G/Y/R/B/O NT_004908AL1363792251024123RH2090  18937.00  1 AL136379, M84332
S/G/Y/R/B/O NT_004908AL1363792251024293RH809511722.94    1  
S/G/Y/R/B/O NT_004908AL1363792251051393RH643941722.13  1888.401 AL136379
S/G/Y/R/B/O NT_004908AL1363792251087303RH697201720.07    1 AL136379
S/G/Y/R/B/O NT_004908AL3595102251455293RH474681720.26    1 AL359510
S/G/Y/R/B/O NT_004908AL3595102251456473RH781691723.78    1 AL359510
S/G/Y/R/B/O NT_004908AL3595102251530953RH802701720.67    1 AL359510
S/G/Y/R/B/O NT_004908AL3595102251686403RH1044541720.07    1 AL359510
S/G/Y/R/B/O NT_004908AL3595102251805403RH1023891720.17    1 AL359510
S/G/Y/R/B/O NT_004908AL3535932252699153RH645451720.07    1AC023889, AC026657, AL670729, AC023889, AC026657, AL353593, AL670729
S/G/Y/R/B/O NT_004908AL6707292253651141RH679551720.07    1AC023889, AC023889, AL670729
S/G/Y/R/B/O NT_004908AC0266572253760671          
S/G/Y/R/B/O NT_004908AL1392882254264343RH1025811720.07    1 AL139288
S/G/Y/R/B/O NT_004908AL1392882254291033RH710981720.07    1 AL139288
S/G/Y/R/B/O NT_004908AL1392882254384823RH643991720.07  1890.001 AL139288
S/G/Y/R/B/O NT_004908AL1392882254396883RH642341723.47  1886.601 AL139288
S/G/Y/R/B/O NT_004908AL1392882254684223RH639101720.07  1883.401 AL139288
S/G/Y/R/B/O NT_004908AL1392882254773383RH689051720.07    1 AL139288
S/G/Y/R/B/O NT_004908AL1392882254774613RH1032201720.17    1 AL139288
S/G/Y/R/B/O NT_004908AL1392882254780883RH643811722.13    1 AL139288
S/G/Y/R/B/O NT_004908AL1392882254780883TIGR-A004X13    1898.101 AL139288
S/G/Y/R/B/O NT_004908AC0238892255407391RH504411722.62  1887.701AL670729, AL670729
S/G/Y/R/B/O NT_004908AC0238892255408021RH672741720.07    1AC026657, AL670729, AC023889, AC026657, AL670729
S/G/Y/R/B/O NT_004908 - RH454021720.88    0AC073252, AL365444, AC026277, AC073252, AL359982, AL365444
S/G/Y/R/B/O NT_004908 - IB957    1885.401AC021762, AC073252, AL365444, AC021762, AC026277, AC073252, AL359982, AL365444
S/G/Y/R/B/O NT_004908 - RH660541723.47    0  
S/G/Y/R/B/O NT_004908 - WI-9027    1885.501AC073252, AL365444, AC026277, AC073252, AL359982, AL365444
S/G/Y/R/B/O NT_004908 - RH931821720.39    0AC092811, AC092811
S/G/Y/R/B/O NT_004908 - SGC35435    1886.301AL158214, AL157880, AL158214
S/G/Y/R/B/O NT_004908 - SGC32811    1887.101AC099790, AC099790
S/G/Y/R/B/O NT_004908 - WI-8020    1887.201AL591895, AC058782, AF253417, AL591895
S/G/Y/R/B/O NT_004908 - WI-14930    1887.201AL122003, AL122003
S/G/Y/R/B/O NT_004908 - D1S251    1887.501AL626763, AL626763
S/G/Y/R/B/O NT_004908 - WI-20783    1887.701AL117348, AC058782, AL117348
S/G/Y/R/B/O NT_004908 - TIGR-A004U18    1888.101AC034298, AL596330, AC012126, AC034298, AL596330
S/G/Y/R/B/O NT_004908 - WI-17838    1888.501AC092811, AC092811
S/G/Y/R/B/O NT_004908 - D1S213    1889.700  
S/G/Y/R/B/O NT_004908 - D1S469    1890.101AL392172, AL392172