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  Chromosome 7 - RH Maps - Single Contig
 

Chromosome 7 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_017168
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017168AC005045831264523RH614467474.18  7448.901 AC005045
S/G/Y/R/B/O NT_017168AC005045831265523RH460067472.73    1 AC005045
S/G/Y/R/B/O NT_017168AC005045831433983RH177787474.18    1 AC005045
S/G/Y/R/B/O NT_017168AC005045831617633RH360917470.27    1 AC005045
S/G/Y/R/B/O NT_017168AC005045831951583RH14305  74179.00  1 AC005045
S/G/Y/R/B/O NT_017168AC005045832013843RH269697474.18    1 AC005045
S/G/Y/R/B/O NT_017168AC005045832413923RH171357484.07    1 AC005045, AC079303
S/G/Y/R/B/O NT_017168AC005045832431693RH169167475.84    1 AC005045, AC079303
S/G/Y/R/B/O NT_017168AC006154832451503          
S/G/Y/R/B/O NT_017168AC005068833057293RH613567474.08  7448.501 AC005068, AC079591
S/G/Y/R/B/O NT_017168AC005068833057303RH615007475.45  7448.701 AC005068, AC079591
S/G/Y/R/B/O NT_017168AC002457833664013          
S/G/Y/R/B/O NT_017168AC003083836345663WI-4532    7446.601 AC003083, AC084136
S/G/Y/R/B/O NT_017168AC003083836363663RH615817474.18  7446.601 AC003083, AC084136
S/G/Y/R/B/O NT_017168AC003083836363663RH8036  74130.00  1 AC003083, AC084136
S/G/Y/R/B/O NT_017168AC005164836802043          
S/G/Y/R/B/O NT_017168AC004992838033363          
S/G/Y/R/B/O NT_017168AC005075840001413RH407167483.18    1 AC005075
S/G/Y/R/B/O NT_017168AC005075840005513RH924907478.31    1 AC005075
S/G/Y/R/B/O NT_017168AC005075840018683RH930017478.11    1 AC005075
S/G/Y/R/B/O NT_017168AC005075840036523RH250917472.84    1 AC005075
S/G/Y/R/B/O NT_017168AC005075840043563RH473317473.55    1  
S/G/Y/R/B/O NT_017168AC005075840052403RH619967474.89  7451.301 AC005075
S/G/Y/R/B/O NT_017168AC005075840052733RH125727483.18    1 AC005075
S/G/Y/R/B/O NT_017168AC005075840062923RH261357473.55    1 AC005075
S/G/Y/R/B/O NT_017168AC005075840071763RH407377478.31    1 AC005075
S/G/Y/R/B/O NT_017168AC005075840077233RH685397477.81    1 AC005075
S/G/Y/R/B/O NT_017168AC005075840079983RH619147474.9974058.007451.101 AC005075
S/G/Y/R/B/O NT_017168AC003991840280463WI-3894    7451.301 AC003991
S/G/Y/R/B/O NT_017168AC003991840402173RH620047473.55  7446.101 AC003991
S/G/Y/R/B/O NT_017168AC003991840402173RH32891  75993.00  1 AC003991
S/G/Y/R/B/O NT_017168AC003991840807053RH407207478.11    1 AC003991
S/G/Y/R/B/O NT_017168AC003991841064403AFMA339XA5    7446.101 AC003991
S/G/Y/R/B/O NT_017168AC006149841322523          
S/G/Y/R/B/O NT_017168AC006005842040623          
S/G/Y/R/B/O NT_017168AC002069842299683          
S/G/Y/R/B/O NT_017168AC006988843883053          
S/G/Y/R/B/O NT_017168AC002127845996233RH121397481.73    1 AC002127
S/G/Y/R/B/O NT_017168AC002127846161433RH34306  74110.00  1 AC002127
S/G/Y/R/B/O NT_017168AC002127846161433RH503  74089.00  1 AC002127
S/G/Y/R/B/O NT_017168AC074253846395003          
S/G/Y/R/B/O NT_017168AC004746846436913          
S/G/Y/R/B/O NT_017168AC002068848017843          
S/G/Y/R/B/O NT_017168AC004015848660423RH617787475.31  7452.501  
S/G/Y/R/B/O NT_017168AC079744850042693          
S/G/Y/R/B/O NT_017168AC006350850060913          
S/G/Y/R/B/O NT_017168AC002382851028493          
S/G/Y/R/B/O NT_017168AC002383852478853RH613577481.73  7452.401 AC002383
S/G/Y/R/B/O NT_017168AC003082853257323          
S/G/Y/R/B/O NT_017168AC004110854956683          


  NT_017168 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017168AC002541856399963RH779447481.85    1 AC002541
S/G/Y/R/B/O NT_017168AC006155857391893D7S492    7444.801 AC006155
S/G/Y/R/B/O NT_017168AC006155857392343RH132877480.13    1 AC006155
S/G/Y/R/B/O NT_017168AC005053858615943RH613817476.66  7454.001 AC005053
S/G/Y/R/B/O NT_017168AC005053859228603RH32884  7835.00  3AC004668, AC004969, AC007276, AC018645, AC004668, AC004969, AC005053, AC007276, AC018645, AC074010
S/G/Y/R/B/O NT_017168AC005053859259763RH984117473.12    3AC004969, AC004969, AC005053, AC006379, AC026105, AC027667, AC055122, AC092972, AL451067
S/G/Y/R/B/O NT_017168AC005053859335503RH489567164.46    4AC004969, AC005400, AC018633, AC018645, AC004969, AC005400, AC006379, AC018633, AC018645
S/G/Y/R/B/O NT_017168AC005053859663013RH940987483.38    1AC004969, AC004969, AC005053
S/G/Y/R/B/O NT_017168AC004969859702653          
S/G/Y/R/B/O NT_017168AC002064860373483RH792497481.85    1 AC002064
S/G/Y/R/B/O NT_017168AC002064861125873RH755367476.27    1 AC002064
S/G/Y/R/B/O NT_017168AC002064861477783RH923387483.38    1 AC002064
S/G/Y/R/B/O NT_017168AC006153861896243RH679617483.80    1 AC006153
S/G/Y/R/B/O NT_017168AC006153861930343RH158667483.38    1 AC006153
S/G/Y/R/B/O NT_017168AC006153862172703RH658327483.38    1 AC006153, AJ250713
S/G/Y/R/B/O NT_017168AC006153862174923RH479487476.66    1 AC006153, AJ250713
S/G/Y/R/B/O NT_017168AC002456862552443          
S/G/Y/R/B/O NT_017168AC003076864114433          
S/G/Y/R/B/O NT_017168AC000059864799623WI-4196    7455.001 AC000059
S/G/Y/R/B/O NT_017168AC002065865340403          
S/G/Y/R/B/O NT_017168AC006036866517943          
S/G/Y/R/B/O NT_017168AC017036868098083RH799637484.63    1 AC017036, AC073458
S/G/Y/R/B/O NT_017168AC002458868884503AFM312YD1    7455.101 AC002458, AC040986, AC073458
S/G/Y/R/B/O NT_017168AC000057869114083          
S/G/Y/R/B/O NT_017168AC084381870121843RH106427484.63    1 AC084381
S/G/Y/R/B/O NT_017168AC084381870687223RH750387484.63    1 AC084381
S/G/Y/R/B/O NT_017168AC084381870701943RH407427477.08    1 AC084381
S/G/Y/R/B/O NT_017168AC084381870729503RH1034127481.85    1 AC084381
S/G/Y/R/B/O NT_017168AC095042871175663          
S/G/Y/R/B/O NT_017168AC079760871693493          
S/G/Y/R/B/O NT_017168AC007313872971573          
S/G/Y/R/B/O NT_017168AC079875874143033          
S/G/Y/R/B/O NT_017168AC000058874314283RH614247475.94  7462.801 AC000058
S/G/Y/R/B/O NT_017168AC000058874314703RH1044557483.18    1 AC000058
S/G/Y/R/B/O NT_017168AC002564875473783RH618877484.00  7456.301AC069570, AC002564, AC069570, AC093321
S/G/Y/R/B/O NT_017168AC000056876029573RH479667474.71    1AC069570, AC000056, AC069570, AC092792, AC093321
S/G/Y/R/B/O NT_017168AC003086877334903RH257537484.53    2AC006568, AC003086, AC006568, AC092792
S/G/Y/R/B/O NT_017168AC000066877661113RH618937486.3274404.007454.501 AC000066, AC092792, AJ010770
S/G/Y/R/B/O NT_017168AC000066878051513RH681337485.47    1 AC000066, AJ010770
S/G/Y/R/B/O NT_017168AC000066878140503RH803007472.30    1 AC000066, AJ010770
S/G/Y/R/B/O NT_017168AC004013878514833          
S/G/Y/R/B/O NT_017168AC000120879120503RH620087483.86  7456.102 AC000120, AJ010770, AP004035
S/G/Y/R/B/O NT_017168AC000120880362973RH279107472.26    1 AC000120
S/G/Y/R/B/O NT_017168AC000118880769793RH284417472.95    1 AC000118
S/G/Y/R/B/O NT_017168AC004539881714283RH806707485.47    1 AC004539
S/G/Y/R/B/O NT_017168AC007566882007283RH617487486.95  7456.201 AC007566
S/G/Y/R/B/O NT_017168AC007566882018943RH615197487.78  7456.501 AC007566
S/G/Y/R/B/O NT_017168AC007566882027713RH619537485.58  7461.301 AC007566
S/G/Y/R/B/O NT_017168AC007566882027953RH101257487.68    1 AC007566
S/G/Y/R/B/O NT_017168AC007566882505043RH685997487.78    1 AC007566


  NT_017168 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017168AC007566882583903RH681327487.97    1 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC007566882594913RH694597487.78    1 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC007566882603093RH408047487.78    1 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC007566882604113RH752327487.99    1 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC007566882684963RH407187487.65    1 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC007566882685583RH789617496.08    1 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC007566882888723RH450337494.60    1 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC007566882945123RH614347485.58  7461.301 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC007566882974693RH920967496.08    1 AC000064, AC007566
S/G/Y/R/B/O NT_017168AC005156883663393RH617637497.56  7462.801 AC005156
S/G/Y/R/B/O NT_017168AC005156884024023WI-11182    7462.901 AC005156
S/G/Y/R/B/O NT_017168AC005156884068333RH158497487.78    1 AC005156
S/G/Y/R/B/O NT_017168AC005156884075503RH666807494.60    1 AC005156
S/G/Y/R/B/O NT_017168AC005156884084783RH616657485.58  7461.301 AC005156
S/G/Y/R/B/O NT_017168AC005156884084783RH179447487.68    1 AC005156
S/G/Y/R/B/O NT_017168AC000065884163173RH617687472.57  7462.801 AC000065
S/G/Y/R/B/O NT_017168AC000065884163863RH676617488.38    1 AC000065
S/G/Y/R/B/O NT_017168AC000065884168223RH408147487.78    1 AC000065
S/G/Y/R/B/O NT_017168AC000065884239063RH1043347473.12    1 AC000065
S/G/Y/R/B/O NT_017168AC004128885258703RH1043167485.52    1 AC004128
S/G/Y/R/B/O NT_017168AC004011886350173RH618357496.40    1 AC004011
S/G/Y/R/B/O NT_017168AC004011886350173SGC35227    7468.701 AC004011
S/G/Y/R/B/O NT_017168AC002454887766963D7S646    7462.801 AC002454, AC005025
S/G/Y/R/B/O NT_017168AC002454887768343RH38532  74309.00  1 AC002454, AC005025
S/G/Y/R/B/O NT_017168AC002454887879233WI-3293    7462.101 AC002454, AC005025
S/G/Y/R/B/O NT_017168AC000119889014233RH990737492.93    1 AC000119
S/G/Y/R/B/O NT_017168AC000119889334693RH1036337496.29    1 AC000119
S/G/Y/R/B/O NT_017168AC000119889786953RH153587490.21  7461.301 AC000119
S/G/Y/R/B/O NT_017168AC000119889786953RH509  74292.00  1 AC000119
S/G/Y/R/B/O NT_017168AC000119889905503RH1034597490.31    1 AC000119
S/G/Y/R/B/O NT_017168AC002453890104543RH363227490.31    1 AC002453
S/G/Y/R/B/O NT_017168AC002453890337953RH486227496.29    1 AC002453
S/G/Y/R/B/O NT_017168AC002453890418753D7S652    7462.901 AC002453
S/G/Y/R/B/O NT_017168AC002453890419253RH508  74285.00  1 AC002453
S/G/Y/R/B/O NT_017168AC002453890555393RH449827490.31    1 AC002453
S/G/Y/R/B/O NT_017168AC002379891605923RH443107496.29    1 AC002379
S/G/Y/R/B/O NT_017168AC003078892277803RH1898  74343.00  1 AC003078
S/G/Y/R/B/O NT_017168AC005024894164913AFMC016YH1    7461.301AC067917, AC005024, AC067917
S/G/Y/R/B/O NT_017168AC067917894647491          
S/G/Y/R/B/O NT_017168AC097663894660803          
S/G/Y/R/B/O NT_017168AC002075894709593          
S/G/Y/R/B/O NT_017168AC002076896154783RH480437496.29    1 AC002076, AC084370
S/G/Y/R/B/O NT_017168AC002076896518543RH1021316415.80    3AC013452, AC036102, AL159985, AC002076, AC013452, AC036102, AC084370, AL159985, AL162577
S/G/Y/R/B/O NT_017168AC002076896897353RH407097490.11    1 AC002076, AC084370
S/G/Y/R/B/O NT_017168AC002076896907623RH361107492.54    1 AC002076, AC084370
S/G/Y/R/B/O NT_017168AC002076896913513RH914307492.54    1 AC002076, AC084370
S/G/Y/R/B/O NT_017168AC002076896915543RH782977496.29    1 AC002076, AC084370, AF217542
S/G/Y/R/B/O NT_017168AC002076896916833RH8856  74434.00  1 AC002076, AC084370, AF217542
S/G/Y/R/B/O NT_017168AC002076896916943RH1723  74417.00  1 AC002076, AC084370, AF217542
S/G/Y/R/B/O NT_017168AC002076896917883RH406437490.31    1 AC002076, AC084370, AF217542


  NT_017168 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017168AC002076896925333RH618077492.5474429.007462.101 AC002076, AF217542
S/G/Y/R/B/O NT_017168AC002076897161923RH614237493.3774410.007461.301 AC002076, AC084370
S/G/Y/R/B/O NT_017168AC002076897314773RH791427496.29    1 AC002076, AC084370
S/G/Y/R/B/O NT_017168AC002076897314783RH180317490.11    1 AC002076, AC084370
S/G/Y/R/B/O NT_017168AC002076897335223RH990747490.51    1 AC002076
S/G/Y/R/B/O NT_017168AC006378897985353RH255837493.37    1 AC006378
S/G/Y/R/B/O NT_017168AC006378897986763RH787057496.29    1 AC006378
S/G/Y/R/B/O NT_017168AC006378898369353WI-948    7462.801 AC006378
S/G/Y/R/B/O NT_017168AC003092898697683RH614957494.60  7461.301 AC003092
S/G/Y/R/B/O NT_017168AC007094900797303RH1024747490.51    1 AC007094
S/G/Y/R/B/O NT_017168AC002074900984673RH986567496.29    1 AC002074
S/G/Y/R/B/O NT_017168AC002074901922113WI-5810    7459.401 AC002074
S/G/Y/R/B/O NT_017168AF004877902270743RH614327492.74  7461.301AC002528, AC002528, AF004877
S/G/Y/R/B/O NT_017168AF004877902274633RH615207489.81  7462.101AC002528, AC002528, AF004877
S/G/Y/R/B/O NT_017168AF004877902356123RH1920  74371.00  1AC002528, AC002528, AF004877
S/G/Y/R/B/O NT_017168AF004877902359393RH615827496.29  7462.801AC002528, AC002528, AF004877
S/G/Y/R/B/O NT_017168AF004877902361493RH167057490.11    1 AF004877
S/G/Y/R/B/O NT_017168AC002528902365733          
S/G/Y/R/B/O NT_017168AC096662903587513RH407557490.21    1 AC096662
S/G/Y/R/B/O NT_017168AC096662903587563RH764977506.00    1 AC096662
S/G/Y/R/B/O NT_017168AC096662903783233RH617037492.74  7461.301 AC096662
S/G/Y/R/B/O NT_017168AC069292903905473RH613447494.8074399.007461.301 AC069292
S/G/Y/R/B/O NT_017168AC069292904732453WI-12157    7462.801 AC069292
S/G/Y/R/B/O NT_017168AC069292904732453RH616267497.99    1 AC069292
S/G/Y/R/B/O NT_017168AC069292904738893RH406587490.21    1 AC069292
S/G/Y/R/B/O NT_017168AC069292904745133RH617047487.15  7461.301 AC069292
S/G/Y/R/B/O NT_017168AC104700905386163          
S/G/Y/R/B/O NT_017168AC069570906034751          
S/G/Y/R/B/O NT_017168 - RH100957490.21    1AC005021, AC005021
S/G/Y/R/B/O NT_017168 - RH31748  74487.00  1AC003079, AC003079
S/G/Y/R/B/O NT_017168 - WI-10054    7462.101AC073886, AC073886
S/G/Y/R/B/O NT_017168 - RH1033757492.54    1AC005021, AC005021
S/G/Y/R/B/O NT_017168 - RH8518  74227.00  1AC002429, AC002429
S/G/Y/R/B/O NT_017168 - RH119767490.31    1AC004022, AC004022
S/G/Y/R/B/O NT_017168 - RH123997494.49    1AC004022, AC004022
S/G/Y/R/B/O NT_017168 - RH128597496.19    1AC004022, AC004022, U55885
S/G/Y/R/B/O NT_017168 - RH165977473.55    0  
S/G/Y/R/B/O NT_017168 - RH176787474.18    0AC005068, AC005068, AC079303, AC079591
S/G/Y/R/B/O NT_017168 - RH250197492.54    1AC002451, AC002451
S/G/Y/R/B/O NT_017168 - RH257137485.52    0  
S/G/Y/R/B/O NT_017168 - RH265797496.29    0  
S/G/Y/R/B/O NT_017168 - RH286127496.19    0  
S/G/Y/R/B/O NT_017168 - RH406917490.51    1AC004022, AC004022, U55885
S/G/Y/R/B/O NT_017168 - RH407597490.11    2AC022261, AC079350, AC022261, AC023460, AC073096, AC079350
S/G/Y/R/B/O NT_017168 - RH407877475.63    1AC005076, AC005076
S/G/Y/R/B/O NT_017168 - RH453557492.54    1AC005021, AC005021
S/G/Y/R/B/O NT_017168 - RH456027496.19    1AC073886, AC073886
S/G/Y/R/B/O NT_017168 - RH459347497.67    1AC005021, AC005021
S/G/Y/R/B/O NT_017168 - RH613987494.70  7462.901AC003079, AC003079
S/G/Y/R/B/O NT_017168 - RH614127494.49  7462.901AC005021, AC005021


  NT_017168 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017168 - RH616397492.54    1AC022261, AC079350, AC022261, AC073096, AC079350
S/G/Y/R/B/O NT_017168 - RH617927492.54    1AC002451, AC002451
S/G/Y/R/B/O NT_017168 - RH619067492.54    2AC022261, AC079350, AC022261, AC023460, AC073096, AC079350
S/G/Y/R/B/O NT_017168 - RH657267475.84    1AC005076, AC005076
S/G/Y/R/B/O NT_017168 - RH666597492.54    0  
S/G/Y/R/B/O NT_017168 - RH671337490.21    1AC004022, AC004022
S/G/Y/R/B/O NT_017168 - RH67927475.84    1AC004829, AC004829
S/G/Y/R/B/O NT_017168 - RH706757488.38    1AC002451, AC002451
S/G/Y/R/B/O NT_017168 - RH764337494.60    0AC007566, AC008780, AC024033, AC027752, AC068492, AC098859, AL049870, AL049870, AL391219, AC000064, AC007566, AC008780, AC024033, AC027752, AC040948, AC068492, AC092356, AC098859, AC113400, AL049870, AL049870, AL391219
S/G/Y/R/B/O NT_017168 - RH787807472.73    0  
S/G/Y/R/B/O NT_017168 - RH982777494.60    0  
S/G/Y/R/B/O NT_017168 - RH795787474.46    0  
S/G/Y/R/B/O NT_017168 - RH915187478.31    0  
S/G/Y/R/B/O NT_017168 - RH925417492.54    1AC004022, AC004022
S/G/Y/R/B/O NT_017168 - RH930947483.38    0AC084381, AC084381
S/G/Y/R/B/O NT_017168 - RH934357475.31    0  
S/G/Y/R/B/O NT_017168 - RH985687492.54    1AC002429, AC002429