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  Chromosome 7 - RH Maps - Single Contig
 

Chromosome 7 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_033966
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033966AC004977936385483RH618687510.2374841.007476.402AC011904, AC004977, AC011904, NG_000004
S/G/Y/R/B/O NT_033966AC004977936435713RH33392  73162.00  1 AC004977
S/G/Y/R/B/O NT_033966AC004977936656113RH1039017512.29    2AC011904, AC004977, AC011904, NG_000004
S/G/Y/R/B/O NT_033966AC004977936709243RH801477516.24    2AC011904, AC004977, AC011904, NG_000004
S/G/Y/R/B/O NT_033966AC004522937143663RH619017511.07  7474.301AC004977, AC004522, AC004977, D14034, X69953
S/G/Y/R/B/O NT_033966AC004522937591323RH1034957511.14    1 AC004522
S/G/Y/R/B/O NT_033966AC004522937637973RH1029077516.34    1 AC004522
S/G/Y/R/B/O NT_033966AC093619937818293RH32204  74853.00  1 AC093619
S/G/Y/R/B/O NT_033966AC093619937834483RH179887511.14    1 AC093619
S/G/Y/R/B/O NT_033966AC093619937890803RH128187516.34    1 AC093619
S/G/Y/R/B/O NT_033966AC093619938116573RH615377510.34  7476.101 AC093619
S/G/Y/R/B/O NT_033966AC093619938117883RH408087516.34    1 AC093619
S/G/Y/R/B/O NT_033966AC093619938124083RH801097516.34    1 AC093619
S/G/Y/R/B/O NT_033966AC093619938178033RH613437516.34  7476.301 AC093619
S/G/Y/R/B/O NT_033966AC093619938178033RH1428  74853.00  1 AC093619
S/G/Y/R/B/O NT_033966AC073842938225733RH165907516.34    1 AC073842
S/G/Y/R/B/O NT_033966AC073842938393793RH619317511.14  7474.001 AC073842
S/G/Y/R/B/O NT_033966AC073842938406093RH784747510.34    1 AC073842
S/G/Y/R/B/O NT_033966AC073842938453263RH476727509.40    1 AC073842
S/G/Y/R/B/O NT_033966AC073842938468013RH613707512.60  7474.501 AC073842
S/G/Y/R/B/O NT_033966AC073842938546973RH683217516.34    1 AC073842
S/G/Y/R/B/O NT_033966AC073842938727443RH990057516.34    1 AC073842
S/G/Y/R/B/O NT_033966AC073842939016813RH615257516.24  7474.101AC092483, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC073842939069103RH407307516.24    1AC092483, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC073842939302893RH33659  74630.00  2AC073517, AC073517, AC073842, AC091390
S/G/Y/R/B/O NT_033966AC073842939482863RH99157516.3474780.00  2AC092483, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC073842939482863RH8524  74780.00  2AC092483, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC073842939483313RH473057511.14    1AC092483, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC073842939484813RH617007516.24  7474.102AC092483, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC073842939490763RH124827516.24    2AC092483, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC073842939491843RH615057516.24  7474.102AC092483, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC005071939519503RH806077516.34    1AC073842, AC092483, AC005071, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC005071939565613RH615027516.24  7474.501 AC005071
S/G/Y/R/B/O NT_033966AC005071939605913RH476467511.14    1AC092483, AC005071, AC092483
S/G/Y/R/B/O NT_033966AC005071939649933RH943847516.34    2AC005073, AC092483, AC005071, AC005071, AC005073, AC092483
S/G/Y/R/B/O NT_033966AC005071940049143RH406667428.37    3AC005073, AC006995, AC061712, AC092483, AC005071, AC005073, AC006995, AC027219, AC061712, AC092483, AC105418
S/G/Y/R/B/O NT_033966AC005071940476953RH796127428.43    2AC004166, AC004867, AC005073, AC092483, AC004166, AC004867, AC005071, AC005073, AC005098, AC092483
S/G/Y/R/B/O NT_033966AC005071940666553RH367356120.69    1AC005073, AC073343, AC005071, AC005073, AC021322, AC073343
S/G/Y/R/B/O NT_033966AC005071940886933RH924247511.14    1AC005073, AC005071, AC005073
S/G/Y/R/B/O NT_033966AC005071940923033RH943847516.34    2AC005073, AC092483, AC005071, AC005071, AC005073, AC092483
S/G/Y/R/B/O NT_033966AC005071941104303RH616737516.24  7474.101AC005073, AC005071, AC005073
S/G/Y/R/B/O NT_033966AC005071941152633RH408077516.34    1AC005073, AC005071, AC005073
S/G/Y/R/B/O NT_033966AC005071941237783RH939697516.34    1AC005073, AC005071, AC005073
S/G/Y/R/B/O NT_033966AC005071941475383RH361437516.24    1AC005073, AC005071, AC005073
S/G/Y/R/B/O NT_033966AC005071941487343RH940357510.44    1AC005073, AC005071, AC005073
S/G/Y/R/B/O NT_033966AC092849941757423RH1041027509.71    1 AC092849
S/G/Y/R/B/O NT_033966AC092849941814803RH182497516.34    1 AF264752
S/G/Y/R/B/O NT_033966AC092849941829433RH677237516.34    1 AC092849
S/G/Y/R/B/O NT_033966AC092849941829573RH1032007511.14    1 AC092849
S/G/Y/R/B/O NT_033966AC092849942043553RH921067516.24    1 AC092849


  NT_033966 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033966AC092849942142433RH116907511.14    1 AC092849
S/G/Y/R/B/O NT_033966AC092849942243963RH656837511.14    1 AC092849
S/G/Y/R/B/O NT_033966AC069281943021063RH407847516.34    1 AC069281, AF053356
S/G/Y/R/B/O NT_033966AC069281943133993RH618957511.1474864.007474.001 AC069281
S/G/Y/R/B/O NT_033966AC069281943154723RH617107511.14  7474.001 AC069281, AF053356
S/G/Y/R/B/O NT_033966AC099394943626043RH1022697516.34    1 AC099394, AF053356
S/G/Y/R/B/O NT_033966AC099394943683713RH454507516.30    1 AC099394, AF053356
S/G/Y/R/B/O NT_033966AC099394943907493RH474957517.07    1 AC099394, AF053356
S/G/Y/R/B/O NT_033966AC099394944013443RH706577517.07    1 AC099394, AF053356
S/G/Y/R/B/O NT_033966AC009488944265823RH678757511.35    1 AC009488, AF053356
S/G/Y/R/B/O NT_033966AC009488944289973RH1038667517.07    1 AC009488, AF053356
S/G/Y/R/B/O NT_033966AC009488944548473RH765757510.40    1 AC009488, AF053356
S/G/Y/R/B/O NT_033966AC009488944707903RH13896  74769.00  1 AC009488, AF053356, M11319, X02158
S/G/Y/R/B/O NT_033966AC011895945502093RH8764  74623.00  1AC084057, AC011895, AC084057, AF312032, AY056047
S/G/Y/R/B/O NT_033966AC011895945506853RH41714  74614.00  1AC084057, AC011895, AC084057, AF312032, AY056047
S/G/Y/R/B/O NT_033966AC011895946142933RH1019347517.07    1AC084057, AC011895, AC084057, AF312032
S/G/Y/R/B/O NT_033966AC011895946209183RH616647517.0773151.007488.101AC084057, AC011895, AC084057, AF312032
S/G/Y/R/B/O NT_033966AC011895946209203RH107457517.07    1AC084057, AC011895, AC084057, AF312032
S/G/Y/R/B/O NT_033966AC011895946334843RH451707517.11    1AC084057, AC011895, AC084057, AF002993, AF312032
S/G/Y/R/B/O NT_033966AC011895946335293RH185327517.11    1AC084057, AC011895, AC084057, AF002993, AF312032
S/G/Y/R/B/O NT_033966AC011895946358373RH618117521.41  7478.801AC084057, AC011895, AC084057, AF002993, AF312032
S/G/Y/R/B/O NT_033966AC011895946377293RH762197516.61    1AC084057, AC011895, AC084057, AF002993, AF312032
S/G/Y/R/B/O NT_033966AC011895946382603RH179097517.11    1AC084057, AC011895, AC084057, AF002993, AF312032, L42812
S/G/Y/R/B/O NT_033966AC092483946815611RH99157516.3474780.00  2AC073842, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC092483946815611RH8524  74780.00  2AC073842, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC092483946817561RH617007516.24  7474.102AC073842, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC092483946823511RH124827516.24    2AC073842, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC092483946824591RH615057516.24  7474.102AC073842, AC073842, AC092483
S/G/Y/R/B/O NT_033966AC005073946887551          
S/G/Y/R/B/O NT_033966AC084057946903801