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  Chromosome 7 - RH Maps - Single Contig
 

Chromosome 7 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_007930
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007930AC105446994444493RH480967517.07    1 AC105446
S/G/Y/R/B/O NT_007930AC105446995465183RH927377517.07    1 AC105446
S/G/Y/R/B/O NT_007930AC105446995502233RH613687517.11  7487.901 AC105446
S/G/Y/R/B/O NT_007930AC105446995502233RH702977519.11    1 AC105446
S/G/Y/R/B/O NT_007930AC105446995507423RH615267517.07  7477.601 AC105446
S/G/Y/R/B/O NT_007930AC105446995508533RH489367517.07    1 AC105446
S/G/Y/R/B/O NT_007930AC112241995554343          
S/G/Y/R/B/O NT_007930AC004876995808253RH270617517.07    1 AF386492
S/G/Y/R/B/O NT_007930AC004876995836383RH482627517.07    1 AC004876, J03764
S/G/Y/R/B/O NT_007930AC004876995858613RH360597517.07    1 AC004876, AF386492
S/G/Y/R/B/O NT_007930AC004876995865293RH646  74678.00  1 AC004876, AF386492
S/G/Y/R/B/O NT_007930AC004876995921773RH406417517.07    1 AC004876, AF386492, J03764
S/G/Y/R/B/O NT_007930AC004876996140753RH714107517.07    1 AC004876
S/G/Y/R/B/O NT_007930AC004876996322473RH616207517.11  7487.901 AC004876
S/G/Y/R/B/O NT_007930AC004876996591443RH250447517.07    1 AC004876, AF207069
S/G/Y/R/B/O NT_007930AC004876996711233RH617177517.11  7487.901 AC004876
S/G/Y/R/B/O NT_007930AC004876996769553RH473787517.07    1 AC004876
S/G/Y/R/B/O NT_007930AC007008996835803          
S/G/Y/R/B/O NT_007930AC006329996853743RH1022227517.07    1 AC006329
S/G/Y/R/B/O NT_007930AC006329996927713RH617297517.11  7487.901 AC006329
S/G/Y/R/B/O NT_007930AC004965998348273WI-867    7486.301 AC004965
S/G/Y/R/B/O NT_007930AC004965999737353RH38594  74694.00  1 AC004965
S/G/Y/R/B/O NT_007930AC0049531000119823RH613517520.43  7485.701 AC004953
S/G/Y/R/B/O NT_007930AC0049531000119823RH1416  74694.00  1 AC004953
S/G/Y/R/B/O NT_007930AC0049531000129033RH1037827519.11    1 AC004953
S/G/Y/R/B/O NT_007930AC0049531000185533RH121357519.11    1 AC004953
S/G/Y/R/B/O NT_007930AC0050961001458973          
S/G/Y/R/B/O NT_007930AC0927881003312983RH697977519.11    1 AC092788
S/G/Y/R/B/O NT_007930AC0927881003353703RH480127520.43    1 AC092788
S/G/Y/R/B/O NT_007930AC0927881003535303RH617977520.43  7485.701 AC092788
S/G/Y/R/B/O NT_007930AC0050721004323183RH1325  74711.00  1 AC005072, AF006752
S/G/Y/R/B/O NT_007930AF0478251004677893RH364347519.11    1 AC005103, AF047825
S/G/Y/R/B/O NT_007930AF0478251005136323D7S515    7485.701 AC005103, AF047825
S/G/Y/R/B/O NT_007930AF0478251005573843D7S666    7487.901 AF047825
S/G/Y/R/B/O NT_007930AF0478251005573843RH38534  74705.00  1 AF047825
S/G/Y/R/B/O NT_007930AF0478251005776433RH483597519.01    1AC005086, AC005086, AC005103, AF047825
S/G/Y/R/B/O NT_007930AC0050861006073003RH165397519.11    1 AC005086, AF024534
S/G/Y/R/B/O NT_007930AC0050881006711783RH69687519.11  7487.901 AC005088, AF024533
S/G/Y/R/B/O NT_007930AC0050881007021193RH1040447519.11    1 AC005088, AF024533, AF030453
S/G/Y/R/B/O NT_007930AC0050881007069193RH1320  74734.00  1 AC005088, AF030453
S/G/Y/R/B/O NT_007930AC0050881007083893RH619107519.11  7486.201 AC005088, AF030453
S/G/Y/R/B/O NT_007930AC0050881007092203RH613827519.11  7487.901 AC005088, AF030453
S/G/Y/R/B/O NT_007930AC0050881007101773RH126337519.11    1 AC005088, AF030453
S/G/Y/R/B/O NT_007930AC0050881007358793RH618507521.01  7489.501 AC005088, AC091390, AF030453
S/G/Y/R/B/O NT_007930AC0050881007360523RH444547521.01    1 AC005088, AC091390, AF030453
S/G/Y/R/B/O NT_007930AC0735171008299753RH33659  74630.00  2AC073842, AC073517, AC073842, AC091390
S/G/Y/R/B/O NT_007930AC0735171008761543RH1033007521.67    1AC093668, AC073517, AC093668
S/G/Y/R/B/O NT_007930AC0936681008962953RH618557521.01  7477.601 AC093668
S/G/Y/R/B/O NT_007930AC0936681009228943RH406677521.67    1 AC093668
S/G/Y/R/B/O NT_007930AC0936681009231843RH758647523.19    1 AC093668


  NT_007930 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007930AC0936681009302793RH406317223.01    4AC004084, AC017116, AC105052, AC004084, AC017116, AC093668, AC093668, AC105052
S/G/Y/R/B/O NT_007930AC0936681009880093RH615597521.77  7490.102AC004951, AC105052, AC004951, AC093668, AC105052
S/G/Y/R/B/O NT_007930AC0936681009880093RH14540  71919.00  2AC004951, AC105052, AC004951, AC093668, AC105052
S/G/Y/R/B/O NT_007930AC0936681010294423RH406317223.01    4AC004084, AC017116, AC105052, AC004084, AC017116, AC093668, AC093668, AC105052
S/G/Y/R/B/O NT_007930AC0040841010365143          
S/G/Y/R/B/O NT_007930AC1050521010872803RH615597521.77  7490.102AC004951, AC093668, AC004951, AC093668, AC105052
S/G/Y/R/B/O NT_007930AC1050521010872803RH14540  71919.00  2AC004951, AC093668, AC004951, AC093668, AC105052
S/G/Y/R/B/O NT_007930AC1050521011286653RH406317223.01    4AC004084, AC017116, AC093668, AC093668, AC004084, AC017116, AC093668, AC093668, AC105052
S/G/Y/R/B/O NT_007930AC1050521011490883RH614287521.67  7491.002AC007000, AC098851, AC007000, AC098851, AC105052
S/G/Y/R/B/O NT_007930AC0064771012285603RH987847433.68    2AC007000, AC006477, AC007000
S/G/Y/R/B/O NT_007930AC0064771012587923RH614997521.67  7491.001 AC006477
S/G/Y/R/B/O NT_007930AC0052501012878223RH38193  74750.00  1 AC005250
S/G/Y/R/B/O NT_007930AC0731271013758563          
S/G/Y/R/B/O NT_007930AC1081671015296983          
S/G/Y/R/B/O NT_007930AC0076831015496373RH167607521.67    1 AC007683
S/G/Y/R/B/O NT_007930AC0076831015529503RH407337522.11    1 AC007683
S/G/Y/R/B/O NT_007930AC0046681017283713RH166117152.14    5AC007276, AC018645, AC004668, AC006379, AC007276, AC018645, AC026105, AC027667, AC055122, AL451067
S/G/Y/R/B/O NT_007930AC0046681017502903RH799967521.61    1 AC004668
S/G/Y/R/B/O NT_007930AC0046681017627273RH613397521.71  7485.001 AC004668
S/G/Y/R/B/O NT_007930AC0046681017642143RH1039677517.11    1 AC004668
S/G/Y/R/B/O NT_007930AC0046681017889273RH767817521.01    1 AC004668
S/G/Y/R/B/O NT_007930AC0937011018176093RH616497522.18  7491.101 AC093701
S/G/Y/R/B/O NT_007930AC0937011018181323RH692397521.67    1 AC093701
S/G/Y/R/B/O NT_007930AC0937011018433163AFMB296YE5    7491.001 AC093701
S/G/Y/R/B/O NT_007930AC0050641019216433SGC32029    7491.001 AC005064
S/G/Y/R/B/O NT_007930AC0050641019228323RH271337522.11    1 AC005064
S/G/Y/R/B/O NT_007930AC0799181019712643          
S/G/Y/R/B/O NT_007930AC0063161019756953RH127727521.67    1 AC006316
S/G/Y/R/B/O NT_007930AC0063161020015063AFM211ZB8P    7491.001 AC006316, AC092065
S/G/Y/R/B/O NT_007930AC0001211021619383RH685257522.18    1 AC000121
S/G/Y/R/B/O NT_007930AC0051011022080803          
S/G/Y/R/B/O NT_007930AC0732081023121903CHLC.GATA4E02.122    7491.101 AC073208
S/G/Y/R/B/O NT_007930AC0069811023211213RH751117520.50    1 AC006981, AC041023
S/G/Y/R/B/O NT_007930AC0069811023265363WI-11169    7494.701 AC006981, AC041023
S/G/Y/R/B/O NT_007930AC0101261023812773          
S/G/Y/R/B/O NT_007930AC0020671025356403RH424187521.67  7491.001 AC002067
S/G/Y/R/B/O NT_007930AC0020671025358163RH38593  75098.00  1 AC002067
S/G/Y/R/B/O NT_007930AC0073931025999523          
S/G/Y/R/B/O NT_007930AC0020791026708343          
S/G/Y/R/B/O NT_007930AC0024321028104913RH31020  75081.00  1 AC002432
S/G/Y/R/B/O NT_007930AC0001171028764543          
S/G/Y/R/B/O NT_007930AC0075581029866383          
S/G/Y/R/B/O NT_007930AC0797961031865123RH693917521.67    1 AC079796
S/G/Y/R/B/O NT_007930AC0797961031885113RH407257521.67    1 AC079796
S/G/Y/R/B/O NT_007930AC0797961031944803WI-4135    7491.001 AC079796
S/G/Y/R/B/O NT_007930AC0912861032338993          
S/G/Y/R/B/O NT_007930AC0073841033501293WI-5394    7491.001 AC002430, AC007384
S/G/Y/R/B/O NT_007930AC0073841034316603RH924457521.67    1 AC002430, AC007384
S/G/Y/R/B/O NT_007930AC0073841034326633RH614487522.18  7491.101 AC002430, AC007384
S/G/Y/R/B/O NT_007930AC0073841034329043RH255187521.67    1 AC002430, AC007384


  NT_007930 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007930AC0073841034369833RH614877521.7175154.007490.101 AC002430, AC007384
S/G/Y/R/B/O NT_007930AC0073841034376223RH406327521.67    1 AC002430, AC007384
S/G/Y/R/B/O NT_007930AC0073841034641663RH613847521.67  7491.001 AC007384
S/G/Y/R/B/O NT_007930AC0050651035057803RH616717523.09  7479.201 AC005065
S/G/Y/R/B/O NT_007930AC0050651035265193RH495057523.1975154.00  1 AC005065
S/G/Y/R/B/O NT_007930AC0050701035527393RH924027523.19    1 AC005070
S/G/Y/R/B/O NT_007930AC0050701035562603RH614647523.19  7490.901 AC005070
S/G/Y/R/B/O NT_007930AC0050701035563003RH120017523.19    1 AC005070
S/G/Y/R/B/O NT_007930AC0050701035566253RH8556  75137.00  1 AC005070
S/G/Y/R/B/O NT_007930AC0050701035577913RH619687523.19  7493.201 AC005070
S/G/Y/R/B/O NT_007930AC0050701035606283RH1033637524.59    1 AC005070
S/G/Y/R/B/O NT_007930AC0050701035636243RH615977524.59  7490.901 AC005070
S/G/Y/R/B/O NT_007930AC0050701035637903RH788547524.29    1 AC005070
S/G/Y/R/B/O NT_007930AC0050701035645113RH943007524.59    1 AC005070
S/G/Y/R/B/O NT_007930AC0050701035657033RH164707524.29    1 AC005070
S/G/Y/R/B/O NT_007930AC0050701035662523RH618087524.31  7484.302AC022525, AC005070, AC022525
S/G/Y/R/B/O NT_007930AC0050701036094353RH982057524.39    1 AC005070
S/G/Y/R/B/O NT_007930AC0048841037537993WI-4405    7483.301 AC004884, AC004995
S/G/Y/R/B/O NT_007930AC0731381038737653CHLC.GGAA6A12    7483.901 AC073138
S/G/Y/R/B/O NT_007930AC0731381039061623RH362897524.79    1 AC073138, AC073317
S/G/Y/R/B/O NT_007930AC0740131039337023WI-11197    7484.901 AC073317, AC074013
S/G/Y/R/B/O NT_007930AC0730731040171373RH407287524.79    2 AC051655, AC073073
S/G/Y/R/B/O NT_007930AC0730731040172113RH936547524.49    2 AC051655, AC073073
S/G/Y/R/B/O NT_007930AC0070301041279533RH614907525.30  7482.502 AC007030, AC051655, AP002349
S/G/Y/R/B/O NT_007930AC0050991042329643RH266377525.81    1 AC005099, AP000791, AP002349
S/G/Y/R/B/O NT_007930AC0050991043305023RH459987526.43    1 AC005099
S/G/Y/R/B/O NT_007930AC0049641043537553RH369397525.71    1 AC004964
S/G/Y/R/B/O NT_007930AC0049641043616043WI-5853    7482.601 AC004964
S/G/Y/R/B/O NT_007930AC0049641043661823RH14769  75168.007484.101 AC004964, AC087055
S/G/Y/R/B/O NT_007930AC0049641043661823RH617017527.51    1 AC004964, AC087055
S/G/Y/R/B/O NT_007930AC0049641043703523WI-1732    7484.101 AC004964
S/G/Y/R/B/O NT_007930AC0049641044203713RH33559  75173.00  1 AC004964, AC005069, AC087055
S/G/Y/R/B/O NT_007930AC0049641044203973RH163947525.81    1 AC004964, AC005069, AC087055
S/G/Y/R/B/O NT_007930AC0048361044304963RH14510  75173.007484.201 AC004836, AC005069, AC087055
S/G/Y/R/B/O NT_007930AC0048361044304963RH614227531.31    1 AC004836, AC005069, AC087055
S/G/Y/R/B/O NT_007930AC0048361044826983WI-6215    7484.101 AC004836, AC005069
S/G/Y/R/B/O NT_007930AC0048361044826983RH619267526.43    1 AC004836, AC005069
S/G/Y/R/B/O NT_007930AC0048361044827683RH269067525.81    1 AC004836, AC005069
S/G/Y/R/B/O NT_007930AC0050951045404883RH179107527.51    1 AC005095
S/G/Y/R/B/O NT_007930AC0050951045415773RH406717527.51    1 AC005095
S/G/Y/R/B/O NT_007930AC0050951045552773WI-3184    7480.801 AC005095
S/G/Y/R/B/O NT_007930AC0070321046982913RH251097527.51    2AC011823, AC108131, AC007032, AC011823, AC108131
S/G/Y/R/B/O NT_007930AC0070321047097583RH32696  75173.007484.101 AC007032
S/G/Y/R/B/O NT_007930AC0070321047097583RH619877532.41    1 AC007032
S/G/Y/R/B/O NT_007930AC0070321047097623RH165417525.81    2AC060785, AC092141, AL160037, AC007032, AC060785, AC092141, AL160037
S/G/Y/R/B/O NT_007930AC0070321047192503RH703777527.51    1 AC007032
S/G/Y/R/B/O NT_007930AC0070321047192503RH32773  75164.00  1 AC007032
S/G/Y/R/B/O NT_007930AC0020781047710023          
S/G/Y/R/B/O NT_007930AC0070311048509703          
S/G/Y/R/B/O NT_007930AC0050501048978123          


  NT_007930 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007930 - RH1019347517.07    1AC011895, AC084057, AC011895, AC084057, AF312032
S/G/Y/R/B/O NT_007930 - RH32642  75173.00  1AC004935, AC004935
S/G/Y/R/B/O NT_007930 - WI-8478    7478.201AC004492, AC004492
S/G/Y/R/B/O NT_007930 - RH1022697516.34    1AC099394, AC099394, AF053356
S/G/Y/R/B/O NT_007930 - RH8712  74892.00  1AC016729, AP004074, AC016729, AC087350, AC087350, AP004074
S/G/Y/R/B/O NT_007930 - RH1029077516.34    1AC004522, AC004522
S/G/Y/R/B/O NT_007930 - RH1038667517.07    1AC009488, AC009488, AF053356
S/G/Y/R/B/O NT_007930 - RH107457517.07    1AC011895, AC084057, AC011895, AC084057, AF312032
S/G/Y/R/B/O NT_007930 - RH115047522.11    0  
S/G/Y/R/B/O NT_007930 - RH128187516.34    1AC093619, AC093619
S/G/Y/R/B/O NT_007930 - RH165907516.34    1AC073842, AC073842
S/G/Y/R/B/O NT_007930 - RH168317522.18    0  
S/G/Y/R/B/O NT_007930 - RH179097517.11    1AC011895, AC084057, AC011895, AC084057, AF002993, AF312032, L42812
S/G/Y/R/B/O NT_007930 - RH182497516.34    1 AF264752
S/G/Y/R/B/O NT_007930 - RH185327517.11    1AC011895, AC084057, AC011895, AC084057, AF002993, AF312032
S/G/Y/R/B/O NT_007930 - RH406997519.11    0AC005088, AC005088, AF024533
S/G/Y/R/B/O NT_007930 - RH407087523.19    0  
S/G/Y/R/B/O NT_007930 - RH407847516.34    1AC069281, AC069281, AF053356
S/G/Y/R/B/O NT_007930 - RH408077516.34    1AC005071, AC005073, AC005071, AC005073
S/G/Y/R/B/O NT_007930 - RH408087516.34    1AC093619, AC093619
S/G/Y/R/B/O NT_007930 - RH451707517.11    1AC011895, AC084057, AC011895, AC084057, AF002993, AF312032
S/G/Y/R/B/O NT_007930 - RH454507516.30    1AC099394, AC099394, AF053356
S/G/Y/R/B/O NT_007930 - RH474957517.07    1AC099394, AC099394, AF053356
S/G/Y/R/B/O NT_007930 - RH484377517.07    0  
S/G/Y/R/B/O NT_007930 - RH613437516.34    1AC093619, AC093619
S/G/Y/R/B/O NT_007930 - RH616647517.07  7478.801AC011895, AC084057, AC011895, AC084057, AF312032
S/G/Y/R/B/O NT_007930 - SGC30522    7480.401AC004839, AC004839
S/G/Y/R/B/O NT_007930 - RH616847521.16  7481.000AC004668, AC004668
S/G/Y/R/B/O NT_007930 - WI-3532    7482.901AC005046, AC005046
S/G/Y/R/B/O NT_007930 - WI-9645    7483.201AC004492, AC004492
S/G/Y/R/B/O NT_007930 - SGC34252    7483.301AC004492, AC004492
S/G/Y/R/B/O NT_007930 - SGC35564    7483.301AC005018, AC005018, AC073420
S/G/Y/R/B/O NT_007930 - WI-15161    7483.401AC078937, AC078937
S/G/Y/R/B/O NT_007930 - SGC44497    7483.801AC004492, AC004492
S/G/Y/R/B/O NT_007930 - WI-17975    7483.901AC004492, AC004492
S/G/Y/R/B/O NT_007930 - WI-6227    7484.101AC005683, AC005683, AF172277
S/G/Y/R/B/O NT_007930 - WI-6368    7484.101AC005683, AC005683, AF172277
S/G/Y/R/B/O NT_007930 - D7S525    7484.101AC004161, AC004161
S/G/Y/R/B/O NT_007930 - WI-13458    7484.101AC007567, AC007567, AF172277
S/G/Y/R/B/O NT_007930 - WI-17564    7484.201AC004917, AC004917
S/G/Y/R/B/O NT_007930 - WI-3565    7484.801AC079396, AC073420, AC079396
S/G/Y/R/B/O NT_007930 - WI-19020    7484.901AC005046, AC005046, AC067787
S/G/Y/R/B/O NT_007930 - WI-7703    7484.901AC005046, AC005046
S/G/Y/R/B/O NT_007930 - WI-16200    7484.901AC004492, AC004492
S/G/Y/R/B/O NT_007930 - WI-8663    7484.901AC006387, AC006387
S/G/Y/R/B/O NT_007930 - RH618117521.41  7485.001AC011895, AC084057, AC011895, AC084057, AF002993, AF312032
S/G/Y/R/B/O NT_007930 - NIB455    7485.201AC005683, AC005683, AF172277
S/G/Y/R/B/O NT_007930 - RH618537521.91  7488.100AC073138, AC073138, AC073317
S/G/Y/R/B/O NT_007930 - RH677237516.34    1AC092849, AC092849
S/G/Y/R/B/O NT_007930 - RH683217516.34    1AC073842, AC073842


  NT_007930 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007930 - RH706577517.07    1AC099394, AC099394, AF053356
S/G/Y/R/B/O NT_007930 - RH713047521.67    0  
S/G/Y/R/B/O NT_007930 - RH762197516.61    1AC011895, AC084057, AC011895, AC084057, AF002993, AF312032
S/G/Y/R/B/O NT_007930 - RH779697522.18    0  
S/G/Y/R/B/O NT_007930 - RH801097516.34    1AC093619, AC093619
S/G/Y/R/B/O NT_007930 - RH802067517.07    0  
S/G/Y/R/B/O NT_007930 - RH806077516.34    1AC005071, AC073842, AC092483, AC005071, AC073842, AC092483
S/G/Y/R/B/O NT_007930 - RH810757516.34    0AC073842, AC073842
S/G/Y/R/B/O NT_007930 - RH939697516.34    1AC005071, AC005073, AC005071, AC005073
S/G/Y/R/B/O NT_007930 - RH943847516.34    2AC005071, AC005071, AC005073, AC092483, AC005071, AC005071, AC005073, AC092483
S/G/Y/R/B/O NT_007930 - RH982307516.34    0AC099394, AC099394
S/G/Y/R/B/O NT_007930 - RH990057516.34    1AC073842, AC073842
S/G/Y/R/B/O NT_007930 - RH99157516.34    2AC073842, AC092483, AC073842, AC092483