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  Chromosome 16 - RH Maps - Single Contig
 

Chromosome 16 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010604
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010604AC002040259228323RH7524616192.95    1 AC002040
S/G/Y/R/B/O NT_010604AC002040259255603RH2565216191.13    1 AC002040
S/G/Y/R/B/O NT_010604AC002040259256383RH3584516192.95    1 AC002040
S/G/Y/R/B/O NT_010604AC002040259270963RH37807  161203.00  1 AC002040
S/G/Y/R/B/O NT_010604AC002040259270963RH5460216191.23  16108.201 AC002040
S/G/Y/R/B/O NT_010604AC002040260121703RH1332416192.95161207.00  1AC099482, AC002040, AC099482
S/G/Y/R/B/O NT_010604AC099482260762143RH1764616196.70    1 AC099482
S/G/Y/R/B/O NT_010604AC099482260763823RH5488816196.70    1 AC099482
S/G/Y/R/B/O NT_010604AC099482260763823SGC35464    16112.001 AC099482
S/G/Y/R/B/O NT_010604AC002300261085053          
S/G/Y/R/B/O NT_010604AC008915262411563RH7600016197.07    2AC025273, AC008915, AC025273
S/G/Y/R/B/O NT_010604AC008915262414183RH9167516194.86    2AC025273, AC008915, AC025273
S/G/Y/R/B/O NT_010604AC008915263246843RH6836816197.07    2AC025273, AC008915, AC025273
S/G/Y/R/B/O NT_010604AC008915263264363RH2561316196.70    2AC025273, AC008915, AC025273
S/G/Y/R/B/O NT_010604AC008915263264383RH5462216194.86  16112.902AC025273, AC008915, AC025273
S/G/Y/R/B/O NT_010604AC002400263823783RH5483716193.96  16113.501 AC002400
S/G/Y/R/B/O NT_010604AC002400263835113RH6569416193.96    1 AC002400
S/G/Y/R/B/O NT_010604AC002400264344613RH6819816196.77    1AC008870, AC002400, AC008870, AC009043
S/G/Y/R/B/O NT_010604AC002400264414203RH32526  161224.00  1AC008870, AC002400, AC008870, AC009043
S/G/Y/R/B/O NT_010604AC002400264414243RH9319116194.86    1AC008870, AC002400, AC008870, AC009043
S/G/Y/R/B/O NT_010604AC002400264448063RH5468616193.96  16113.501AC008870, AC002400, AC008870, AC009043
S/G/Y/R/B/O NT_010604AC002400264449613RH1677116197.65    1AC008870, AC002400, AC008870, AC009043
S/G/Y/R/B/O NT_010604AC002400264634893RH6799416196.77    1AC008870, AC002400, AC008870, AC009043
S/G/Y/R/B/O NT_010604AC008870264682463RH6843016197.65    1 AC008870, AC009043
S/G/Y/R/B/O NT_010604AC008870265110913RH6809916196.77    1AC012317, AC008870, AC009043, AC012317
S/G/Y/R/B/O NT_010604AC008870265277353RH7971616193.96    2AC012317, AL022100, AC008870, AC009043, AC012185, AC012317, AL022100
S/G/Y/R/B/O NT_010604AC008870265298993RH5454516196.70    1AC012317, AC008870, AC009043, AC012185, AC012317
S/G/Y/R/B/O NT_010604AC008870265298993WI-21991    16112.001AC012317, AC008870, AC009043, AC012185, AC012317
S/G/Y/R/B/O NT_010604AC008870265353263RH2609916193.96    1AC012317, AC008870, AC009043, AC012185, AC012317, X90725
S/G/Y/R/B/O NT_010604AC012317265698873          
S/G/Y/R/B/O NT_010604AC002302266190343RH9844716193.96    1 AC002302, AC012185
S/G/Y/R/B/O NT_010604AC002302266262943D16S417    16115.301 AC002302
S/G/Y/R/B/O NT_010604AC002302266262943RH1338316194.86161255.00  1 AC002302
S/G/Y/R/B/O NT_010604AC002302266821303WI-10655    16113.501 AC002302, AC012185
S/G/Y/R/B/O NT_010604AC010268268727382          
S/G/Y/R/B/O NT_010604AC002299270754273RH14023  161307.00  1 AC002299, AC025438, AC091118, X05971
S/G/Y/R/B/O NT_010604AC002299270759983RH6722816200.53    1 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270772793RH32093  161296.00  1 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270774803RH6830216200.53    1 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270775093RH9358016196.97    1 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270778883RH2514016200.53    1 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270796433RH1007016200.53    1 AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270807663RH5487216196.97  16113.501 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270807673RH7081216196.97    1 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270853713RH1529816200.53  16116.901 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC002299270853713RH1030  161307.00  1 AC002299, AC025438, AC091118
S/G/Y/R/B/O NT_010604AC004125272226653RH5465316196.97  16116.901 AC004125
S/G/Y/R/B/O NT_010604AC008938273303483WI-5785    16115.401AC010321, AC008938, AC010321
S/G/Y/R/B/O NT_010604AC010321274006873RH4831016196.97    1 AC010321
S/G/Y/R/B/O NT_010604AC010321274009803RH1602216196.91    1 AC010321


  NT_010604 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010604AC010321274228383RH6997816200.43    1 AC010321
S/G/Y/R/B/O NT_010604AC010321274305383RH7129716196.97    1 AC010321
S/G/Y/R/B/O NT_010604AC010321274318793RH2674916196.91    1 AC010321
S/G/Y/R/B/O NT_010604AC002565275352393D16S401    16116.901 AC002565
S/G/Y/R/B/O NT_010604AC002565275352393RH1319016197.70161346.00  1 AC002565
S/G/Y/R/B/O NT_010604AC002565275977763RH10427416196.91    1AC008731, AC002565, AC008731
S/G/Y/R/B/O NT_010604AC008731276865273RH2523516196.97    1 AC008731
S/G/Y/R/B/O NT_010604AC008731276865533RH1602816196.97    1 AC008731
S/G/Y/R/B/O NT_010604AC008731277800483RH7671316196.97    1 AC008731
S/G/Y/R/B/O NT_010604AC008731277952393RH7031716200.53    1AC010545, AC008731, AC010545, AC046167
S/G/Y/R/B/O NT_010604AC010545278930193RH5468416197.18  16120.401AC011271, AC010545, AC011271
S/G/Y/R/B/O NT_010604AC010545279256083RH6955016202.55    1AC011271, AC010545, AC011271
S/G/Y/R/B/O NT_010604AC011271279671941RH9219416197.18    1 AC011271
S/G/Y/R/B/O NT_010604AC002331279807313          
S/G/Y/R/B/O NT_010604AC008756280081732          
S/G/Y/R/B/O NT_010604AC002289281617133          
S/G/Y/R/B/O NT_010604AC009158283198023          
S/G/Y/R/B/O NT_010604AC093511285320243RH13741  161420.00  1 AC093511
S/G/Y/R/B/O NT_010604AC093511285484903RH5479616198.59  16121.201 AC093511
S/G/Y/R/B/O NT_010604AC093511285484903RH5477516198.42  16122.001 AC093511
S/G/Y/R/B/O NT_010604AC093509286272813AFM059XC1    16120.401 AC093509
S/G/Y/R/B/O NT_010604AC093509286651413RH5472616204.10  16121.201AC093516, AC093509, AC093516
S/G/Y/R/B/O NT_010604AC093516287076853          
S/G/Y/R/B/O NT_010604AC093524287931853          
S/G/Y/R/B/O NT_010604AC092141289387711RH8470  161399.00  1 AC092141
S/G/Y/R/B/O NT_010604AC092141289622701RH165417525.81    2AC007032, AC060785, AL160037, AC007032, AC060785, AC092141, AL160037
S/G/Y/R/B/O NT_010604AC092141294692781GCT16F05    16118.501AC060785, AC060785, AC092141
S/G/Y/R/B/O NT_010604AC060785289408131          
S/G/Y/R/B/O NT_010604AF265340289941293WI-10732    16118.501AC060785, AC060785, AF265340
S/G/Y/R/B/O NT_010604AC002288290770323          
S/G/Y/R/B/O NT_010604AC008741293630351RH7007416203.58    1AC011271, AC008741, AC011271
S/G/Y/R/B/O NT_010604AC008741293697781RH6879916197.23    1AC011271, AC008741, AC011271
S/G/Y/R/B/O NT_010604AC008741294224221RH5486016202.75  16117.001 AC008741
S/G/Y/R/B/O NT_010604 - RH7061416197.07    1  
S/G/Y/R/B/O NT_010604 - WI-14770    16122.001AC008732, AC008732
S/G/Y/R/B/O NT_010604 - RH9342816194.86    0  
S/G/Y/R/B/O NT_010604 - RH9919216196.97    0