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  Chromosome 16 - RH Maps - Single Contig
 

Chromosome 16 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010494
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010494AC021880800326301CHLC.GAAT2C08    16329.902 AC021116, AC021880, AC092139, AL645494
S/G/Y/R/B/O NT_010494AC007411798550591          
S/G/Y/R/B/O NT_010494AC009148799716483RH7078116461.54    2AC007411, AC021880, AC007411, AC009148, AC021116, AC021880, AC092139, AL645494
S/G/Y/R/B/O NT_010494AC009148799960853RH31387  163548.00  1 AC009148
S/G/Y/R/B/O NT_010494AC092135800562632          
S/G/Y/R/B/O NT_010494AC099480801382462RH5486916462.99  16331.601AC007411, AC092135, AC099483, AC007411, AC092135, AC099480, AC099483
S/G/Y/R/B/O NT_010494AC099480801384462RH9880016462.99    1AC007411, AC092135, AC099483, AC007411, AC092135, AC099480, AC099483
S/G/Y/R/B/O NT_010494AC099480801994832RH9857716467.94    1AC092135, AC099483, AC092135, AC099480, AC099483
S/G/Y/R/B/O NT_010494AC099480802309482WI-10802    16328.301AC099483, AC099480, AC099483
S/G/Y/R/B/O NT_010494AC099480802366992SGC30303    16329.901 AC099480
S/G/Y/R/B/O NT_010494AC099480802366992RH5466316463.93163782.00  1 AC099480
S/G/Y/R/B/O NT_010494AC099483802386581          
S/G/Y/R/B/O NT_010494AC009100802872432RH9412816464.60    1AC099524, AC009100, AC099524
S/G/Y/R/B/O NT_010494AC099524802925692          
S/G/Y/R/B/O NT_010494AC098966803554353          
S/G/Y/R/B/O NT_010494AC092142805343593WI-7624    16330.001 AC092142
S/G/Y/R/B/O NT_010494AC092142805343593RH5480916468.04    1 AC092142
S/G/Y/R/B/O NT_010494AC092142805344363RH6832716462.02    1 AC092142
S/G/Y/R/B/O NT_010494AC092142805386353SGC34243    16329.901 AC092142
S/G/Y/R/B/O NT_010494AC092142805386353RH5454816466.72163781.00  1 AC092142
S/G/Y/R/B/O NT_010494AC092142805386933RH1645516467.94    1 AC092142
S/G/Y/R/B/O NT_010494AC092142805740513RH6805816463.77    1AC092115, AC092115, AC092142
S/G/Y/R/B/O NT_010494AC092142806745373RH7908  163597.00  1AC009140, AC009140, AC084796, AC092142
S/G/Y/R/B/O NT_010494AC092142806746773RH6900616463.77    1AC009140, AC009140, AC084796, AC092142
S/G/Y/R/B/O NT_010494AC092142806746783RH1146916463.77    1AC009140, AC009140, AC084796, AC092142
S/G/Y/R/B/O NT_010494AC009140807247763RH6783716463.77    1 AC009140
S/G/Y/R/B/O NT_010494AC009140807641123RH6958616463.77    1AC092294, AC009140, AC092294
S/G/Y/R/B/O NT_010494AC092294807863301          
S/G/Y/R/B/O NT_010494AC009028809075663D16S422    16329.901 AC009028
S/G/Y/R/B/O NT_010494AC009028809075663RH406416467.94    1 AC009028
S/G/Y/R/B/O NT_010494AC009028809075663RH1033  163617.00  1 AC009028
S/G/Y/R/B/O NT_010494AC099506809546472WI-6450    16331.601AC009028, AC009028, AC021787, AC099506
S/G/Y/R/B/O NT_010494AC092351811820043WI-3217    16329.901 AC012424, AC092351
S/G/Y/R/B/O NT_010494AC092351812072693WI-3181    16329.901AC011656, AC011656, AC012424, AC092351
S/G/Y/R/B/O NT_010494AC009117812563013          
S/G/Y/R/B/O NT_010494AC098803813878493          
S/G/Y/R/B/O NT_010494AC024590813903971          
S/G/Y/R/B/O NT_010494AC011656814308311          
S/G/Y/R/B/O NT_010494AC106736814656973RH4868516428.62    2AC009136, AC099495, AC009136, AC099495, AC106736
S/G/Y/R/B/O NT_010494AC106736815732143RH14139  163190.00  1 AC106736
S/G/Y/R/B/O NT_010494AC010547816309453RH37868  163190.00  1 AC010547
S/G/Y/R/B/O NT_010494AC010547816310363RH2568316430.73    1 AC010547
S/G/Y/R/B/O NT_010494AC010547816581063RH10329316427.18    1 AC010547
S/G/Y/R/B/O NT_010494AC010547817491243RH4893116434.60    1AC009097, AC009097, AC010547
S/G/Y/R/B/O NT_010494AC010547817510903RH14137  163186.00  1AC009097, AC009097, AC010547
S/G/Y/R/B/O NT_010494AC009097818283483RH8050016425.35    1 AC009097
S/G/Y/R/B/O NT_010494AC009097818293253RH1565016428.71    1 AC009097
S/G/Y/R/B/O NT_010494AC009097818300923RH5463816440.49  16314.901 AC009097
S/G/Y/R/B/O NT_010494AC009097818843993CHLC.GATA81D12    16316.901AC010653, AC009097, AC010653
S/G/Y/R/B/O NT_010494AC009097819125193RH5477016427.18  16313.101AC010653, AC009097, AC010653


  NT_010494 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010494AC009097819127913RH5476116428.52  16316.301AC010653, AC009097, AC010653
S/G/Y/R/B/O NT_010494AC010653819220312          
S/G/Y/R/B/O NT_010494AC005199820126583          
S/G/Y/R/B/O NT_010494AC009127822491102RH1390  163205.00  1 AC009127
S/G/Y/R/B/O NT_010494AC009127822491512RH5474316434.60  16312.901 AC009127
S/G/Y/R/B/O NT_010494AC009087822749763RH5462716427.07  16316.301AC009127, AC009087, AC009127
S/G/Y/R/B/O NT_010494AC009087823255593RH1158518335.99    2AC009127, AC012569, AC087744, AP001895, AP002479, AC009087, AC009127, AC012569, AC087744, AP001895, AP002479, D28126
S/G/Y/R/B/O NT_010494AC009087823269783RH7485816436.06    1AC009127, AC009087, AC009127
S/G/Y/R/B/O NT_010494AC009087823446763RH1775716427.18    1 AC009087
S/G/Y/R/B/O NT_010494AC009087823812983RH9828816428.71    1AC004682, AC004682, AC009087, AC009160, M10935, M69197
S/G/Y/R/B/O NT_010494AC009087823813763RH1162916427.18    2AC004682, AC004682, AC004682, AC004682, AC009087, AC009087, AC009160, AC009160, K03431, M10935, M69197, M69197
S/G/Y/R/B/O NT_010494AC009087823814043RH7030516428.71    2AC004682, AC004682, AC004682, AC004682, AC009087, AC009087, AC009160, AC009160, K03431, M10935, M69197, M69197
S/G/Y/R/B/O NT_010494AC009087823853573RH7793116427.18    1AC004682, AC004682, AC009087, AC009160, M69197, M92067
S/G/Y/R/B/O NT_010494AC009087823854213RH6959216427.18    1AC004682, AC004682, AC009087, AC009160, M10935, M69197, M92067
S/G/Y/R/B/O NT_010494AC009087823856663RH7556916433.25    1AC004682, AC004682, AC009087, AC009160, M69197, M92067
S/G/Y/R/B/O NT_010494AC009087823913343RH5473816432.94  16316.301AC004682, AC004682, AC009087, AC009160, M69197, M92067
S/G/Y/R/B/O NT_010494AC009087823975673RH1162916427.18    2AC004682, AC004682, AC004682, AC004682, AC009087, AC009087, AC009160, AC009160, K03431, M10935, M69197, M69197
S/G/Y/R/B/O NT_010494AC009087823975953RH7030516428.71    2AC004682, AC004682, AC004682, AC004682, AC009087, AC009087, AC009160, AC009160, K03431, M10935, M69197, M69197
S/G/Y/R/B/O NT_010494AC009087824054243RH5473316428.32  16312.801AC004682, AC004682, AC009087, AC009160, M69197, M92069
S/G/Y/R/B/O NT_010494AC009087824218063RH4549316428.62    1AC004682, AC004682, AC009087, AC009160
S/G/Y/R/B/O NT_010494AC009087824218163RH8072716436.02    1AC004682, AC004682, AC009087, AC009160
S/G/Y/R/B/O NT_010494AC009087824309053RH10230216434.60    1AC004682, AC004682, AC009160
S/G/Y/R/B/O NT_010494AC009087824330943RH5484916434.60  16313.101AC004682, AC004682, AC009087, AC009160
S/G/Y/R/B/O NT_010494AC009087824331913WI-15979    16313.801AC004682, AC004682, AC009087, AC009160
S/G/Y/R/B/O NT_010494AC009087824332223RH2543016427.91    1AC004682, AC004682, AC009087, AC009160
S/G/Y/R/B/O NT_010494AC004682824378983          
S/G/Y/R/B/O NT_010494AC009075825672633          
S/G/Y/R/B/O NT_010494AC004158827514483RH5465816434.75  16313.101 AC004158, AC010651, AC012324
S/G/Y/R/B/O NT_010494AC004158827609773RH2504916427.18    1 AC004158, AC010651, AC012324
S/G/Y/R/B/O NT_010494AC004158827621603RH1009816433.56    1 AC004158, AC010651, AC012324
S/G/Y/R/B/O NT_010494AC092289828970493WI-5254    16314.501 AC010651, AC092289
S/G/Y/R/B/O NT_010494AC010748829981693RH4263616430.43163239.00  1 AC010748
S/G/Y/R/B/O NT_010494AC004943831119123RH5474816436.16  16312.601 AC004943
S/G/Y/R/B/O NT_010494AC004943831175863RH6512716432.77    1 AC004943
S/G/Y/R/B/O NT_010494AC004943831216193RH6583616434.08    1 AC004943
S/G/Y/R/B/O NT_010494AC004943831340293RH6856116433.35    1 AC004943
S/G/Y/R/B/O NT_010494AC002044832822203RH6988016434.70    1 AC002044
S/G/Y/R/B/O NT_010494AC008757834150673          
S/G/Y/R/B/O NT_010494AC116667834371993          
S/G/Y/R/B/O NT_010494 - RH9198316453.23    1AC079414, AC079414, AF077345
S/G/Y/R/B/O NT_010494 - RH32574  163407.0016323.801AC009139, AC009139
S/G/Y/R/B/O NT_010494 - WI-22533    16323.902AC009139, AC010548, AC009139, AC010548