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  Chromosome 16 - RH Maps - Single Contig
 

Chromosome 16 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010498
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010498AC027686522143632          
S/G/Y/R/B/O NT_010498AC087564522148103          
S/G/Y/R/B/O NT_010498AC007344523949593CHLC.GGAA20G02    16260.301AC027686, AC007344, AC007841, AC027686
S/G/Y/R/B/O NT_010498AC007344524079863RH5461316351.05    1AC027686, AC007344, AC007841, AC027686
S/G/Y/R/B/O NT_010498AC007344524079863FB5C6    16232.801AC027686, AC007344, AC007841, AC027686
S/G/Y/R/B/O NT_010498AC026123525045303RH7442416343.80    1 AC026123
S/G/Y/R/B/O NT_010498AC026123525045303RH35376  162285.00  1 AC026123
S/G/Y/R/B/O NT_010498AC084058525311132          
S/G/Y/R/B/O NT_010498AC109600526245761          
S/G/Y/R/B/O NT_010498AC023823527504233          
S/G/Y/R/B/O NT_010498AC007489528044923          
S/G/Y/R/B/O NT_010498AC009039530403383CHLC.GATA81B12    16235.601 AC007337
S/G/Y/R/B/O NT_010498AC009039530448053WI-3942    16236.401 AC007337, AC009039
S/G/Y/R/B/O NT_010498AC009039530485413RH9239116343.80    1 AC007337, AC009039
S/G/Y/R/B/O NT_010498AC007341531268173RH6600616344.72    1 AC007341
S/G/Y/R/B/O NT_010498AC007333532463193CHLC.GATA61C06    16258.701 AC007333
S/G/Y/R/B/O NT_010498AC007501533210753WI-9897    16235.901 AC007501
S/G/Y/R/B/O NT_010498AC007501533899413RH9243816343.80    1AC007490, AC007490, AC007501
S/G/Y/R/B/O NT_010498AC007490534577523          
S/G/Y/R/B/O NT_010498AC093514535164493RH10416916344.72    1AC026462, AC026462, AC093514
S/G/Y/R/B/O NT_010498AC093514535353773RH5463916349.99    1AC026462, AC026462, AC093514
S/G/Y/R/B/O NT_010498AC093514535353773WI-16816    16233.601AC026462, AC026462, AC093514
S/G/Y/R/B/O NT_010498AC093514535467803RH5475216350.17    1AC026462, AC026462, AC093514
S/G/Y/R/B/O NT_010498AC093514535467803WI-18486    16233.801AC026462, AC026462, AC093514
S/G/Y/R/B/O NT_010498AC026462536418593          
S/G/Y/R/B/O NT_010498AC007340538464812WI-4691    16262.001AC007346, AC007340, AC007346
S/G/Y/R/B/O NT_010498AC007346538790532RH411116347.05    1 AC007346
S/G/Y/R/B/O NT_010498AC007346538790532D16S419    16232.101 AC007346
S/G/Y/R/B/O NT_010498AC007492539440442          
S/G/Y/R/B/O NT_010498AC007906539989063          
S/G/Y/R/B/O NT_010498AC079416541822482          
S/G/Y/R/B/O NT_010498AC007345542485053RH9923316349.79    1AC079416, AC007345, AC079416
S/G/Y/R/B/O NT_010498AC007345542654753RH9888016373.25    1AC079416, AC007345, AC079416
S/G/Y/R/B/O NT_010498AC007345542755653RH5477916351.15  16264.201AC079416, AC007345, AC079416
S/G/Y/R/B/O NT_010498AC007345542756743RH1184016349.17    1AC079416, AC007345, AC079416
S/G/Y/R/B/O NT_010498AC007345543084473WI-4744    16262.001AC007342, AC007342, AC007345
S/G/Y/R/B/O NT_010498AC007342544307213RH6834216350.10    1 AC007342
S/G/Y/R/B/O NT_010498AC007342544366473RH5472016349.17  16262.001 AC007342
S/G/Y/R/B/O NT_010498AC007342544368013RH6671616372.93    1 AC007342
S/G/Y/R/B/O NT_010498AC007342544398953RH982616349.86    1AC007497, AC007342, AC007497
S/G/Y/R/B/O NT_010498AC007342544401353RH6576716351.05    1AC007497, AC007342, AC007497
S/G/Y/R/B/O NT_010498AC007342544411993RH9408216351.01    3AC007497, AC010342, AC114930, AC007342, AC007497, AC010342, AC114930
S/G/Y/R/B/O NT_010498AC007497545504933WI-20448    16259.901 AC007497
S/G/Y/R/B/O NT_010498AC007497545857863D16S415    16264.001AC084795, AC007497, AC084795
S/G/Y/R/B/O NT_010498AC007497545975623RH31370  162334.00  1AC084795, AC084795
S/G/Y/R/B/O NT_010498AC084795546402643WI-11251    16263.701AC007909, AC007909, AC084795
S/G/Y/R/B/O NT_010498AC007909547130753          
S/G/Y/R/B/O NT_010498AC007496548496233RH5484616343.80    1 AC007496
S/G/Y/R/B/O NT_010498AC007496548496233WI-22517    16233.901 AC007496
S/G/Y/R/B/O NT_010498AC007496548893313WI-4215    16262.101 AC007496


  NT_010498 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010498AC007496549649473RH4549016349.79    1AC007347, AC007347, AC007496
S/G/Y/R/B/O NT_010498AC007496549764073RH7498216349.40    1AC007347, AC007347, AC007496
S/G/Y/R/B/O NT_010498AC007347549972623RH42854  162341.00  1 AC007347
S/G/Y/R/B/O NT_010498AC007347550300143WI-7505    16264.202 AC007347, AC040164, AC072030
S/G/Y/R/B/O NT_010498AC007347550386943RH1595416372.93    2 AC007347, AC040164, AC072030
S/G/Y/R/B/O NT_010498AC007347550621693RH5471616349.27  16261.902AC007907, AC007347, AC007907, AC040164, AC072030
S/G/Y/R/B/O NT_010498AC007347550625013RH4888216351.11    2AC007907, AC007347, AC007907, AC040164, AC072030
S/G/Y/R/B/O NT_010498AC007347550632183RH1018216349.48    2AC007907, AC007347, AC007907, AC040164, AC072030
S/G/Y/R/B/O NT_010498AC007907550851253          
S/G/Y/R/B/O NT_010498AC018553552324093RH1849916352.11    1 AC018553
S/G/Y/R/B/O NT_010498AC007343554239813CHLC.GGAA23C09    16233.201 AC007343
S/G/Y/R/B/O NT_010498AC079412554740203          
S/G/Y/R/B/O NT_010498AC025288555471231          
S/G/Y/R/B/O NT_010498 - RH4549716350.52    0  
S/G/Y/R/B/O NT_010498 - RH9921216349.89    0