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  Chromosome 16 - RH Maps - Single Contig
 

Chromosome 16 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010530
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010530AC040167186171691RH698741695.31    1 AC040167, AC087190
S/G/Y/R/B/O NT_010530AC040167186179461WI-12288    1645.601 AC040167, AC087190
S/G/Y/R/B/O NT_010530AC040167186179461RH547741677.04    1 AC040167, AC087190
S/G/Y/R/B/O NT_010530AC092122186526223          
S/G/Y/R/B/O NT_010530AC012178187980733          
S/G/Y/R/B/O NT_010530AC007221189539283          
S/G/Y/R/B/O NT_010530AC007218192521413RH545121696.50  1656.801 AC007218, AC009935
S/G/Y/R/B/O NT_010530AC007218192521973RH9171216110.62    1 AC007218, AC009935
S/G/Y/R/B/O NT_010530AC007218192533343RH156411696.50    1AC006531, AC006531, AC007218, AC009935, AC009935, AC009935
S/G/Y/R/B/O NT_010530AC007218192546813WI-9974    1657.201AC006531, AC006531, AC007218, AC009935
S/G/Y/R/B/O NT_010530AC007218192574163RH9818616112.31    1AC006531, AC006531, AC007218
S/G/Y/R/B/O NT_010530AC007218192591223RH1562716110.62    1AC006531, AC006531, AC007218, AC009935, AC018551
S/G/Y/R/B/O NT_010530AC007218192602923RH547761695.38  1657.301AC006531, AC006531, AC007218, AC018551
S/G/Y/R/B/O NT_010530AC007218192602923RH14116  16410.00  1AC006531, AC006531, AC007218, AC018551
S/G/Y/R/B/O NT_010530AC007218192614943RH1097216100.90    1AC006531, AC006531, AC007218, AC009935, AC018551
S/G/Y/R/B/O NT_010530AC006531193251233          
S/G/Y/R/B/O NT_010530AC026423194204623          
S/G/Y/R/B/O NT_010530AC017012195274331          
S/G/Y/R/B/O NT_010530AC007596196162093RH699531696.50    1AC017012, AC007596, AC017012
S/G/Y/R/B/O NT_010530AC007596196598113D16S407    1648.401AC017012, AC022168, AC079415, AC007596, AC017012, AC022168, AC079415
S/G/Y/R/B/O NT_010530AC007596196598113RH241  16436.00  1AC017012, AC022168, AC079415, AC007596, AC017012, AC022168, AC079415
S/G/Y/R/B/O NT_010530AC007596196598113RH132481696.60    1AC017012, AC022168, AC079415, AC007596, AC017012, AC022168, AC079415
S/G/Y/R/B/O NT_010530AC022168197931781          
S/G/Y/R/B/O NT_010530AC079415197996641          
S/G/Y/R/B/O NT_010530AC074136198727572RH547421698.92  1657.201AC007595, AC007595, AC074136, AC083992
S/G/Y/R/B/O NT_010530AC074136198727572RH14098  16484.00  1AC007595, AC007595, AC074136, AC083992
S/G/Y/R/B/O NT_010530AC016139201968301RH1824  16426.00  1AC027277, AC016139, AC027277
S/G/Y/R/B/O NT_010530AC016139201968411RH548361696.60  1656.801AC027277, AC016139, AC027277
S/G/Y/R/B/O NT_010530AC016139202427881RH5466116111.05  1646.901 AC016139
S/G/Y/R/B/O NT_010530AC007595198922823RH1037421699.54    1AC074136, AC074136, AC083992
S/G/Y/R/B/O NT_010530AC007595199491103RH923361699.26    1 AC007595, AC083992
S/G/Y/R/B/O NT_010530AC027277200653822RH993051696.60    1 AC027277
S/G/Y/R/B/O NT_010530AC027277201101052RH704021696.50    1 AC027277, AY057060
S/G/Y/R/B/O NT_010530AC027277201101252RH7123616101.01    1 AC027277, AY057060
S/G/Y/R/B/O NT_010530AC027277201135852RH5476416101.01  1646.801 AC027277
S/G/Y/R/B/O NT_010530AC027277201143842RH665991695.31    1 AC027277
S/G/Y/R/B/O NT_010530AC027277201652182RH687411696.50    1AC016139, AC016139, AC027277
S/G/Y/R/B/O NT_010530 - RH1038931696.60    0 AC087190
S/G/Y/R/B/O NT_010530 - D16S3128    1637.501AC024953, AC024953
S/G/Y/R/B/O NT_010530 - RH10400316101.84    1AC012626, AC040173, AC012626, AC040173
S/G/Y/R/B/O NT_010530 - D16S418    1639.301AC006075, AC027683, AC006075, AC027683
S/G/Y/R/B/O NT_010530 - RH1040921696.50    0 AC087190
S/G/Y/R/B/O NT_010530 - WI-15171    1639.301AC005774, AC005774, AF109120
S/G/Y/R/B/O NT_010530 - RH10411716111.26    1AC007216, AC007216, AC009048, U95742
S/G/Y/R/B/O NT_010530 - WI-21917    1639.401AC022206, AC022206
S/G/Y/R/B/O NT_010530 - RH104371692.83    1AC012173, AC074381, AC012173, AC074381
S/G/Y/R/B/O NT_010530 - RH1157716101.01    1AC007616, AC099489, AC007616, AC099489
S/G/Y/R/B/O NT_010530 - RH132271692.83    1AC018769, AC074052, AC018769, AC074052
S/G/Y/R/B/O NT_010530 - RH133961690.91    1AC006075, AC027683, AC006075, AC027683
S/G/Y/R/B/O NT_010530 - RH1602916101.01    1AC007216, AC007226, AC007216, AC007226, AC009048, AC010654, U95742


  NT_010530 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010530 - RH1672316102.47    0  
S/G/Y/R/B/O NT_010530 - RH167411694.21    1AC012173, AC022167, AC012173, AC022167
S/G/Y/R/B/O NT_010530 - RH254691696.60    0  
S/G/Y/R/B/O NT_010530 - RH257521699.02    1AC007220, AC009121, AC025285, AC007220, AC009121, AC025285
S/G/Y/R/B/O NT_010530 - RH399716108.36  1639.401AC007014, AC007493, AC007014, AC007493
S/G/Y/R/B/O NT_010530 - RH399816105.93  1639.401AC007014, AC007014
S/G/Y/R/B/O NT_010530 - WI-3849    1639.601AC079410, AC079410
S/G/Y/R/B/O NT_010530 - WI-21012    1640.101AC007224, AC074381, AC007224, AC074381
S/G/Y/R/B/O NT_010530 - D16S406    1640.101AC018769, AC074052, AC018769, AC074052
S/G/Y/R/B/O NT_010530 - SGC32378    1641.000  
S/G/Y/R/B/O NT_010530 - WI-6421    1641.101AC007222, AC007222
S/G/Y/R/B/O NT_010530 - RH424051691.81  1642.801AC093522, AC093522
S/G/Y/R/B/O NT_010530 - RH653711692.73    1AC012173, AC074381, AC012173, AC074381
S/G/Y/R/B/O NT_010530 - SGC32991    1642.801AC093515, AC027684, AC093515
S/G/Y/R/B/O NT_010530 - RH482351692.83    1AC012173, AC074381, AC012173, AC074381
S/G/Y/R/B/O NT_010530 - WI-3725    1642.801AC006075, AC006075
S/G/Y/R/B/O NT_010530 - SGC34323    1644.201AC012173, AC012173
S/G/Y/R/B/O NT_010530 - D16S495    1644.301AC018768, AC018768, AC021795, AC027684
S/G/Y/R/B/O NT_010530 - WI-20091    1644.500  
S/G/Y/R/B/O NT_010530 - WI-4457    1644.601U95743, U95743
S/G/Y/R/B/O NT_010530 - CHLC.GATA70B04    1644.901AC018767, AC018769, AC018767, AC018769
S/G/Y/R/B/O NT_010530 - WI-1796    1645.600  
S/G/Y/R/B/O NT_010530 - WI-17942    1645.701AC012626, AC040173, AC012626, AC040173
S/G/Y/R/B/O NT_010530 - RH545221690.91  1646.301AC005774, AC005774
S/G/Y/R/B/O NT_010530 - RH545751699.34    1AC007226, AC007613, AC007226, AC007613, AC010654
S/G/Y/R/B/O NT_010530 - RH546141699.96    0AC007598, AC007598, AC007612
S/G/Y/R/B/O NT_010530 - RH5462816101.01  1648.500 AC087190
S/G/Y/R/B/O NT_010530 - RH546711695.31    0 AC087190
S/G/Y/R/B/O NT_010530 - RH5470216101.01  1651.701AC009121, AC009121
S/G/Y/R/B/O NT_010530 - RH547291698.84    1AC007220, AC007220
S/G/Y/R/B/O NT_010530 - RH547941699.26    0  
S/G/Y/R/B/O NT_010530 - RH548111695.31    0  
S/G/Y/R/B/O NT_010530 - RH5485116101.21  1653.701AC012173, AC012173
S/G/Y/R/B/O NT_010530 - WI-13631    1653.801AC007220, AC007220
S/G/Y/R/B/O NT_010530 - CHLC.ATA3A07    1655.701AC007601, AC007601, AC034281
S/G/Y/R/B/O NT_010530 - WI-15779    1655.701AC007216, AC007216, AC009048, U95742
S/G/Y/R/B/O NT_010530 - WI-19180    1655.901AC007216, AC007226, AC007216, AC007226, AC009048, AC010654, U95742
S/G/Y/R/B/O NT_010530 - WI-3711    1656.301AC007216, AC007601, AC007216, AC007601, AC034281
S/G/Y/R/B/O NT_010530 - RH548581690.91  1656.601AC005774, AC005774, AF109120
S/G/Y/R/B/O NT_010530 - RH548751698.81    1AC007220, AC007220
S/G/Y/R/B/O NT_010530 - SGC32077    1656.801AC007613, AC007616, AC007613, AC007616
S/G/Y/R/B/O NT_010530 - RH650861694.15    1AC012173, AC022167, AC012173, AC022167
S/G/Y/R/B/O NT_010530 - SGC31085    1657.001AC007601, AC007601
S/G/Y/R/B/O NT_010530 - RH6524716110.64    2AC009173, AC010401, L76568, AC009173, AC010401, AF491814, L76568, L77890
S/G/Y/R/B/O NT_010530 - RH6546416110.51    1AC109598, AC109598
S/G/Y/R/B/O NT_010530 - RH6586316101.42    0  
S/G/Y/R/B/O NT_010530 - RH683451692.83    1AC012173, AC012173
S/G/Y/R/B/O NT_010530 - RH690401694.15    1AC007224, AC012173, AC074381, AC007224, AC012173, AC074381
S/G/Y/R/B/O NT_010530 - RH695331698.71    1AC009121, AC009121
S/G/Y/R/B/O NT_010530 - RH701691698.81    1AC007220, AC007220


  NT_010530 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010530 - RH7076916100.48    1AC012173, AC022167, AC012173, AC022167
S/G/Y/R/B/O NT_010530 - RH708601698.95    1AC009121, AC025285, U15422, AC009121, AC025285, U15422, Z46940
S/G/Y/R/B/O NT_010530 - RH7480116100.59    1AC012173, AC022167, AC012173, AC022167
S/G/Y/R/B/O NT_010530 - RH7630116100.90    0  
S/G/Y/R/B/O NT_010530 - RH763401688.67    1AC024953, AC024953
S/G/Y/R/B/O NT_010530 - RH784351699.44    1AC012626, AC040173, AC012626, AC040173
S/G/Y/R/B/O NT_010530 - RH7912316111.24    0  
S/G/Y/R/B/O NT_010530 - RH927961691.81    1AC093515, AC027684, AC093515
S/G/Y/R/B/O NT_010530 - RH9366416101.01    1AC007613, AC007616, AC007613, AC007616