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  Chromosome 16 - RH Maps - Single Contig
 

Chromosome 16 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010542
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010542AC009113923213542RH8077616502.32    1AC007905, AC007905, AC009113
S/G/Y/R/B/O NT_010542AC009113923461032RH5488116489.83  16350.601AC007905, AC007905, AC009113
S/G/Y/R/B/O NT_010542AC009113924076682RH6554516489.83    1AC009098, AC103890, AC103890, AC009098, AC009113, AC023256, AC103890, AC103890, AC105409
S/G/Y/R/B/O NT_010542AC009113924121082RH5471316489.83  16342.001AC009098, AC103890, AC103890, AC009098, AC009113, AC023256, AC103890, AC103890, AC105409
S/G/Y/R/B/O NT_010542AC009113924121402RH5469316489.83  16342.001AC009098, AC103890, AC103890, AC009098, AC009113, AC023256, AC103890, AC103890, AC105409
S/G/Y/R/B/O NT_010542AC009113924235822RH5481516489.83  16350.601AC009098, AC103890, AC103890, AC009098, AC009113, AC023256, AC103890, AC103890, AC105409
S/G/Y/R/B/O NT_010542AC009113924242952RH6965816499.76    1AC009098, AC103890, AC103890, AC009098, AC009113, AC023256, AC103890, AC103890, AC105409
S/G/Y/R/B/O NT_010542AC009113924244322RH10327816489.83    1AC103890, AC103890, AC009113, AC023256, AC103890, AC103890, AC105409
S/G/Y/R/B/O NT_010542AC007905923057352          
S/G/Y/R/B/O NT_010542AC103890924420353          
S/G/Y/R/B/O NT_010542AC009098925124941          
S/G/Y/R/B/O NT_010542AC092120925220892RH8016916491.28    1AC009098, AC074300, AC009098, AC023256, AC074300, AC092120
S/G/Y/R/B/O NT_010542AC074300925269412          
S/G/Y/R/B/O NT_010542AC092123925515511RH31389  163940.00  1 AC023256
S/G/Y/R/B/O NT_010542AC092123925571341RH1546916494.42    1AC074300, AC092120, AC074300, AC092120, AC092123
S/G/Y/R/B/O NT_010542AC010538926935672RH1099716490.14    1AC012300, AC068559, AC092123, AC010538, AC012300, AC068559, AC092123
S/G/Y/R/B/O NT_010542AC010538926984782RH5483816490.24  16352.501AC068559, AC010538, AC068559
S/G/Y/R/B/O NT_010542AC010538926991272RH13749  163933.00  1AC068559, AC092123, AC010538, AC068559, AC092123
S/G/Y/R/B/O NT_010542AC010538926991272RH8901  163933.00  1AC068559, AC092123, AC010538, AC068559, AC092123
S/G/Y/R/B/O NT_010542AC010538926991452RH14153  163933.00  1AC068559, AC092123, AC010538, AC068559, AC092123
S/G/Y/R/B/O NT_010542AC010538927323472RH1202016497.98    1AC012300, AC068559, AC010538, AC012300, AC068559
S/G/Y/R/B/O NT_010542AC010538927845632RH2528316490.14    1AC012300, AC068559, AC010538, AC012300, AC068559
S/G/Y/R/B/O NT_010542AC010538928357432RH1614416497.98    1AC012300, AC068559, AC103888, AC010538, AC012300, AC068559, AC103888, AJ010344
S/G/Y/R/B/O NT_010542AC010538928360402RH10303816497.98    2AC012300, AC068559, AC103888, AC009555, AC010538, AC012300, AC068559, AC103888
S/G/Y/R/B/O NT_010542AC010538928727052RH2713916497.98    1 AC010538
S/G/Y/R/B/O NT_010542AC012300927777981RH8028916501.78    1AC010538, AC068559, AC103888, AC010538, AC012300, AC068559, AC103888, S70330
S/G/Y/R/B/O NT_010542AC068559927140911          
S/G/Y/R/B/O NT_010542AC103888927840652RH6657316499.87    1AC010538, AC012300, AC068559, AC010538, AC012300, AC068559, AC103888
S/G/Y/R/B/O NT_010542AC103888927842392RH1744116499.87    1AC010538, AC012300, AC068559, AC010538, AC012300, AC068559, AC103888
S/G/Y/R/B/O NT_010542AC005360928777723RH1207216499.87    1AC010538, AC005360, AC010538, Z83095
S/G/Y/R/B/O NT_010542AC005360928779023RH5471916497.98  16353.101AC010538, AC005360, AC010538, Z83095
S/G/Y/R/B/O NT_010542AC005567929171233          
S/G/Y/R/B/O NT_010542AC005565929485443          
S/G/Y/R/B/O NT_010542AC092385930095793RH6786016501.03    1 AC092385
S/G/Y/R/B/O NT_010542AC092385930104853RH5457316502.43163914.0016357.401 AC092385
S/G/Y/R/B/O NT_010542AC092385930104853RH9320716499.97    1 AC092385
S/G/Y/R/B/O NT_010542AC092143930489683RH8030516504.73    1 AC008145, AC092143, AF263461
S/G/Y/R/B/O NT_010542AC092143930530773RH2667916502.43    1 More than 15
S/G/Y/R/B/O NT_010542AC092143930580253RH1812616502.00    1 AC092143, AF263461
S/G/Y/R/B/O NT_010542AC092143930586583RH9229616499.97    1 AC008145, AC092143, AF263461
S/G/Y/R/B/O NT_010542AC092143930731723RH6526316503.63    1AL030996, AC008145, AL030996
S/G/Y/R/B/O NT_010542AC092143930736523RH6580916501.46    1 AC092143
S/G/Y/R/B/O NT_010542AC092143930737273RH5451316503.63  16357.301 AC092143
S/G/Y/R/B/O NT_010542AC092143931076333RH9279516499.97    1 AC092143
S/G/Y/R/B/O NT_010542AC092143931429383RH6996216500.71    1 AC007181, AC092143
S/G/Y/R/B/O NT_010542AC092143931429443RH4185416502.22    1 AC007181, AC092143
S/G/Y/R/B/O NT_010542AC092143931430643RH2594216502.00    1 AC007181, AC092143
S/G/Y/R/B/O NT_010542AC092143931669933RH1657216499.97    1 AC006838, AC092143
S/G/Y/R/B/O NT_010542AC092143931763323RH4872916499.97    1 AC006838, AC092143
S/G/Y/R/B/O NT_010542AC092143931812813RH4842716507.89    1AC007046, AC006838, AC007046, AC092143


  NT_010542 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010542AC007046931953872          
S/G/Y/R/B/O NT_010542AC007657932138562          
S/G/Y/R/B/O NT_010542 - RH9207616505.29    2AC009108, AC113351, AC009108, AC113351
S/G/Y/R/B/O NT_010542 - CHLC.GATA71F09    16345.100