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  Chromosome 16 - RH Maps - Single Contig
 

Chromosome 16 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010393
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010393AC10949550040631          
S/G/Y/R/B/O NT_010393AC02645250096981          
S/G/Y/R/B/O NT_010393AC02412050159991RH7563719276.38    2AC022150, AC021848, AC022150, AC024120
S/G/Y/R/B/O NT_010393AC01909150344791          
S/G/Y/R/B/O NT_010393AC09352650377851          
S/G/Y/R/B/O NT_010393AC00915284231671RH4800616181.49    1AC109495, AC009152, AC109495
S/G/Y/R/B/O NT_010393AC00203951217573RH7073816170.08    4AC002045, AC040158, AC092137, AC002045, AC005136, AC040158, AC092137
S/G/Y/R/B/O NT_010393AC00203951303133RH6715216167.94    4AC020757, AC023816, AC040158, AC002039, AC002039, AC005136, AC020757, AC023816, AC040158
S/G/Y/R/B/O NT_010393AC00203951602193RH5467616166.06  1671.003AC009065, AC010488, AC040158, AC092137, L39891, AC002039, AC002039, AC009065, AC010488, AC012171, AC040158, AC092137, L39891
S/G/Y/R/B/O NT_010393AC00203951651673RH7073816170.08    4AC002045, AC040158, AC092137, AC002045, AC005136, AC040158, AC092137
S/G/Y/R/B/O NT_010393AC00203951737233RH6715216167.94    4AC020757, AC023816, AC040158, AC002039, AC002039, AC005136, AC020757, AC023816, AC040158
S/G/Y/R/B/O NT_010393AC00203951999133RH5467616166.06  1671.003AC009065, AC010488, AC040158, AC092137, L39891, AC002039, AC002039, AC009065, AC010488, AC012171, AC040158, AC092137, L39891
S/G/Y/R/B/O NT_010393AC01048852202702RH1741316176.25    1AC002039, AC002039, AC010488, L20967
S/G/Y/R/B/O NT_010393AC01048852203812RH14141  16774.00  1AC002039, AC002039, AC010488
S/G/Y/R/B/O NT_010393AC01048852204432RH6482816170.71    1AC002039, AC002039, AC010488, L20967
S/G/Y/R/B/O NT_010393AC01048852205672RH7084116172.28    1AC002039, AC002039, AC010488
S/G/Y/R/B/O NT_010393AC09148952405491          
S/G/Y/R/B/O NT_010393AC040158104039081RH6715216167.94    4AC002039, AC002039, AC020757, AC023816, AC002039, AC002039, AC005136, AC020757, AC023816, AC040158
S/G/Y/R/B/O NT_010393AC040158104121461RH7073816170.08    4AC002045, AC092137, AC002045, AC005136, AC040158, AC092137
S/G/Y/R/B/O NT_010393AC040158104311461RH32189  16889.00  2AC092375, AC017077, AC092375
S/G/Y/R/B/O NT_010393AC040158104595021RH7142316168.23    1 AC040158
S/G/Y/R/B/O NT_010393AC092137104805731RH4891216168.26    1AC091489, AC091489, AC092137
S/G/Y/R/B/O NT_010393U9574152908923          
S/G/Y/R/B/O NT_010393U9574353959883WI-4457    1644.601 U95743
S/G/Y/R/B/O NT_010393AC00917356014833RH6524716110.64    2AC010401, L76568, AC009173, AC010401, AF491814, L76568, L77890
S/G/Y/R/B/O NT_010393AC01040156550303RH4192916162.54    1 AC010401
S/G/Y/R/B/O NT_010393U9132256888493          
S/G/Y/R/B/O NT_010393AC01262659200672RH784351699.44    1AC040173, AC012626, AC040173
S/G/Y/R/B/O NT_010393AC01262659236092RH10440716113.50    1AC040173, AC012626, AC040173
S/G/Y/R/B/O NT_010393AC01262659596802RH5462016115.11  1645.701AC040173, AC012626, AC040173
S/G/Y/R/B/O NT_010393AC01262659774202WI-5195    1670.101AC040173, AC012626, AC040173
S/G/Y/R/B/O NT_010393AC01262659896312RH10400316101.84    1AC040173, AC012626, AC040173
S/G/Y/R/B/O NT_010393AC04017358876702          
S/G/Y/R/B/O NT_010393U9131860644263RH5474716176.15  1670.902AC010488, AC020757, AC010488, AC020757, U91318
S/G/Y/R/B/O NT_010393U9131861092173RH8050216163.34    4AC010093, AC020757, AL358794, AC010093, AC020757, AC097471, AL358794, U91318
S/G/Y/R/B/O NT_010393U9131861119643RH2648216164.14    2AC020757, AC020757, U91318
S/G/Y/R/B/O NT_010393U9131861830133RH7487816163.47    1AC025778, AC025778, U91318
S/G/Y/R/B/O NT_010393U9131861830233RH7094716176.35    1AC025778, AC025778, U91318
S/G/Y/R/B/O NT_010393U9131861831253RH10341916167.48    1AC025778, AC025778, U91318
S/G/Y/R/B/O NT_010393U9131861902473RH1095516176.25    1AC025778, AC025778, U91318
S/G/Y/R/B/O NT_010393U9131861916593RH13962  16796.00  1AC025778, AC025778, U91318
S/G/Y/R/B/O NT_010393AC00302662635393RH9130016169.00    1AC025778, AC026452, AC003026, AC025778, AC026452
S/G/Y/R/B/O NT_010393AC02577862770153          
S/G/Y/R/B/O NT_010393U9132364666553RH9358616173.82    1AC024120, AC024120, U91323
S/G/Y/R/B/O NT_010393AF00154865438393RH1503916176.25    1 AF001548
S/G/Y/R/B/O NT_010393AF00154865438393RH1035  16818.00  1 AF001548
S/G/Y/R/B/O NT_010393AF00154866081313RH5460716170.28  1672.501 AF001548
S/G/Y/R/B/O NT_010393AC02640166288343RH6988916177.45    1AF001548, AC026401, AF001548
S/G/Y/R/B/O NT_010393AC02640166291473RH1748316173.51    1AF001548, AC026401, AF001548
S/G/Y/R/B/O NT_010393AC02640166308663RH5478016170.28  1672.701AF001548, AC026401, AF001548


  NT_010393 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010393AC02640166310163RH9140716177.37    1AF001548, AC026401, AF001548
S/G/Y/R/B/O NT_010393U9574067103143RH6883916173.72    1AC026401, AC026401, U95740
S/G/Y/R/B/O NT_010393U9574067379393RH5474516167.68  1671.201AC026401, AC026401, U95740
S/G/Y/R/B/O NT_010393U9574067447253RH7513216164.81    1AC026401, AC026401, U95740
S/G/Y/R/B/O NT_010393U9574067448083RH418981668.67    1AC026401, AC026401, U95740
S/G/Y/R/B/O NT_010393AF00155268497533RH32903  16827.00  1AC020621, AC023816, AC002043, AC002043, AC020621, AC023816, AF001552
S/G/Y/R/B/O NT_010393AF00155268497533RH5479216161.41  1686.601AC020621, AC023816, AC002043, AC002043, AC020621, AC023816, AF001552
S/G/Y/R/B/O NT_010393AC02075769605133RH6715216167.94    4AC002039, AC002039, AC023816, AC040158, AC002039, AC002039, AC005136, AC020757, AC023816, AC040158
S/G/Y/R/B/O NT_010393AC02075770173273RH1640216177.06    3AC002045, AC008785, AC027275, AC002045, AC008785, AC020757, AC027275
S/G/Y/R/B/O NT_010393AC02075770261643RH2648216164.14    2U91318, AC020757, U91318
S/G/Y/R/B/O NT_010393AC02075770290033RH8050216163.34    4AC010093, AL358794, U91318, AC010093, AC020757, AC097471, AL358794, U91318
S/G/Y/R/B/O NT_010393AC02075770736953RH5474716176.15  1670.902AC010488, U91318, AC010488, AC020757, U91318
S/G/Y/R/B/O NT_010393AC02062170785391          
S/G/Y/R/B/O NT_010393AC02381670796361          
S/G/Y/R/B/O NT_010393AC09229171878173RH6979916167.25    1 AC092291
S/G/Y/R/B/O NT_010393AC09229171878833SGC34046    1622.901 AC092291
S/G/Y/R/B/O NT_010393AC00916773436543RH251721670.61    2AC097313, AC009167, AC097313
S/G/Y/R/B/O NT_010393AC00916773668063RH2852916164.45    1 AC009167
S/G/Y/R/B/O NT_010393AC00916773677563RH4870516165.62    2AC097313, AC009167, AC097313
S/G/Y/R/B/O NT_010393AC00916773683963RH1000216167.28    2AC097313, AC009167, AC097313
S/G/Y/R/B/O NT_010393AC00916773719663RH6598916167.28    1 AC009167
S/G/Y/R/B/O NT_010393AC00204574252763RH7073816170.08    4AC040158, AC092137, AC002045, AC005136, AC040158, AC092137
S/G/Y/R/B/O NT_010393AC00204574738693RH1640216177.06    3AC008785, AC020757, AC027275, AC002045, AC008785, AC020757, AC027275
S/G/Y/R/B/O NT_010393AC00878575123463          
S/G/Y/R/B/O NT_010393AC02727576567842RH1640216177.06    3AC002045, AC008785, AC020757, AC002045, AC008785, AC020757, AC027275
S/G/Y/R/B/O NT_010393AC00249276926683RH7675119239.30    3AC011508, AC023970, AC097375, AC002492, AC011508, AC023970, AC097375
S/G/Y/R/B/O NT_010393AC00249277677943CHLC.GATA42E11    1674.001 AC002492
S/G/Y/R/B/O NT_010393AC00249277871583RH9901116174.13    3AC020716, AC026472, AC002492, AC020716, AC025289, AC026472
S/G/Y/R/B/O NT_010393AC00402078602403RH939802339.54    2AC012307, AC004020, AC012307
S/G/Y/R/B/O NT_010393AC00402078646653RH930722354.70    2AC012307, AC004020, AC012307
S/G/Y/R/B/O NT_010393AC00402078685073RH32114  25039.00  2AC012307, AC004020, AC012307
S/G/Y/R/B/O NT_010393AC00402078689723RH115912355.91    1AC012307, AC004020, AC012307
S/G/Y/R/B/O NT_010393AC00402078696763RH102752339.54    1AC012307, AC004020, AC012307
S/G/Y/R/B/O NT_010393AC00402078703353RH686032356.34    2AC012307, AC004020, AC012307
S/G/Y/R/B/O NT_010393AC00402079095183RH4238616181.49  1680.801AC091489, AC004020, AC091489
S/G/Y/R/B/O NT_010393AC00402079110383WI-5644    1686.201AC091489, AC004020, AC091489
S/G/Y/R/B/O NT_010393AC01060179906733          
S/G/Y/R/B/O NT_010393AC00409780551483          
S/G/Y/R/B/O NT_010393AC02527782228433RH10419316181.49    1 AC025277
S/G/Y/R/B/O NT_010393AC10678383090773          
S/G/Y/R/B/O NT_010393AC10676984896271          
S/G/Y/R/B/O NT_010393AC10944686653661RH9890916179.79    1AC026008, AC106769, AC021115, AC026008, AC106769, AC109446
S/G/Y/R/B/O NT_010393AC10944686865591RH4869416168.26    1AC026008, AC026008, AC109446
S/G/Y/R/B/O NT_010393AC02600886971011          
S/G/Y/R/B/O NT_010393AC09896588109153          
S/G/Y/R/B/O NT_010393AC01037390264291          
S/G/Y/R/B/O NT_010393AC09232690271913          
S/G/Y/R/B/O NT_010393AC02647292756663RH9901116174.13    3AC002492, AC020716, AC002492, AC020716, AC025289, AC026472
S/G/Y/R/B/O NT_010393AC02647292823333RH5452716184.15  1686.802AC020716, AC020716, AC025289, AC026472
S/G/Y/R/B/O NT_010393AC02647292870723RH8710  16995.00  2AC020716, AC020716, AC025289, AC026472


  NT_010393 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010393AC02647292987193RH6603216182.91    2AC020716, AC020716, AC025289, AC026472
S/G/Y/R/B/O NT_010393AC02647293034173RH6891616182.91    2AC020716, AC020716, AC025289, AC026472
S/G/Y/R/B/O NT_010393AC02647293266603RH31366  16991.00  1 AC025289, AC026472
S/G/Y/R/B/O NT_010393AC09228793691393RH33831  16999.00  2AC020716, AC099523, AC020716, AC092287, AC099523
S/G/Y/R/B/O NT_010393AC09951895577653RH253  161023.00  2AC099523, AC099518, AC099523
S/G/Y/R/B/O NT_010393AC09951895577653RH1330116185.47    2AC099523, AC099518, AC099523
S/G/Y/R/B/O NT_010393AC09951895606273RH9299416183.53    1 AC099518
S/G/Y/R/B/O NT_010393AC09951895728453RH2629216183.53    1 AC099518
S/G/Y/R/B/O NT_010393AC09951895739223RH5455016185.37  1695.101 AC099518
S/G/Y/R/B/O NT_010393AC09951895741643RH5484716165.02  1688.801 AC099518
S/G/Y/R/B/O NT_010393AC09951895741693RH3688516183.53    1 AC099518
S/G/Y/R/B/O NT_010393AC09951895760723RH6701816185.47    1 AC099518
S/G/Y/R/B/O NT_010393AC09951896153563RH9254416185.37    1AC010494, AC010494, AC099518
S/G/Y/R/B/O NT_010393AC09951896156953RH9839516183.53    1AC010494, AC010494, AC099518
S/G/Y/R/B/O NT_010393AC01049496423293          
S/G/Y/R/B/O NT_010393AC00300397623153RH9357116185.47    1 AC003003
S/G/Y/R/B/O NT_010393AC00300397899473WI-4563    1696.301 AC003003
S/G/Y/R/B/O NT_010393U9132198281973WI-6467    1689.701 U91321
S/G/Y/R/B/O NT_010393U9132198618613RH5460616183.53  1688.401 U91321
S/G/Y/R/B/O NT_010393U9132199784783RH9318616185.47    1 U91321
S/G/Y/R/B/O NT_010393U9132199805233RH1657616162.10    1 U91321
S/G/Y/R/B/O NT_010393U9132199928303RH6551316183.53    1AC003108, AC003108, U91321
S/G/Y/R/B/O NT_010393U9132199962473RH9345816185.47    1AC003108, AC003108, U91321
S/G/Y/R/B/O NT_010393U9132199968253RH2598516185.47    1AC003108, AC003108
S/G/Y/R/B/O NT_010393U9132199972833RH5472816183.53  1688.501AC003108, AC003108, U91321
S/G/Y/R/B/O NT_010393U9132199976003RH7923616185.47    1AC003108, AC003108, U91321
S/G/Y/R/B/O NT_010393AC003108100474233RH5476516185.37  1696.201AC012621, AC003108, AC012621
S/G/Y/R/B/O NT_010393AC012621101522293          
S/G/Y/R/B/O NT_010393AC002550101745273RH6943516185.37    1 AC002550
S/G/Y/R/B/O NT_010393AC002550101816913RH5451916183.53  1695.001 AC002550
S/G/Y/R/B/O NT_010393AC002550101817053RH5457116185.37  1695.301 AC002550
S/G/Y/R/B/O NT_010393AC002550101818173RH1097016183.53    1 AC002550
S/G/Y/R/B/O NT_010393AC002550101828863RH7539316183.53    1 AC002550
S/G/Y/R/B/O NT_010393AC002550101947723RH5457016183.53  1695.101 AC002550
S/G/Y/R/B/O NT_010393AC002550102084273RH4883916183.53    1 AC002550
S/G/Y/R/B/O NT_010393AC027130102560633RH6933016185.57    1 AC027130
S/G/Y/R/B/O NT_010393AC027130103240973CHLC.GAAT1E9    1690.001 AC027130
S/G/Y/R/B/O NT_010393AC027130103509843RH6891916185.57    1AC004131, AC004131, AC027130
S/G/Y/R/B/O NT_010393AC027130103512223RH1783916185.37    1AC004131, AC004131, AC027130
S/G/Y/R/B/O NT_010393AC027130103515323RH5470616185.47  1696.301AC004131, AC004131, AC027130
S/G/Y/R/B/O NT_010393AC027130103519973RH1262  161047.00  1AC004131, AC004131, AC027130
S/G/Y/R/B/O NT_010393AC027130103520733WI-2753    1692.801AC004131, AC004131, AC027130
S/G/Y/R/B/O NT_010393AC027130103533503RH5462316185.37  1695.401AC004131, AC004131, AC027130
S/G/Y/R/B/O NT_010393AC027130103542543RH14901  161047.00  1AC004131, AC004131, AC027130
S/G/Y/R/B/O NT_010393AC027130103542603RH7826316183.53    1AC004131, AC004131, AC027130
S/G/Y/R/B/O NT_010393AC004131103709213          
S/G/Y/R/B/O NT_010393 - RH14903  16821.00  0  
S/G/Y/R/B/O NT_010393 - RH31365  16722.00  0  
S/G/Y/R/B/O NT_010393 - RH32569  16912.00  0AC003007, AC005632, AC008740, AC009086, AC068150, AC092119, AC092375, AC106782, AC106788, AC003007, AC005632, AC008740, AC009086, AC009124, AC017077, AC022147, AC023463, AC068150, AC069176, AC092119, AC092285, AC092375, AC106782, AC106788