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  Chromosome 16 - RH Maps - Single Contig
 

Chromosome 16 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010419
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010419AC09948928169051RH7030616164.37    1AC007616, AC007616, AC099489
S/G/Y/R/B/O NT_010419AC09948928171661RH7890  16529.00  1AC007616, AC007616, AC099489
S/G/Y/R/B/O NT_010419AC09948928177891RH1157716101.01    1AC007616, AC007616, AC099489
S/G/Y/R/B/O NT_010419AC09948929518841WI-4271    1659.201 AC099489
S/G/Y/R/B/O NT_010419AC00761627672912          
S/G/Y/R/B/O NT_010419AC00761330041883RH74518  16579.00  1AC007616, AC007613, AC007616
S/G/Y/R/B/O NT_010419AC00761330042383RH2693516118.37    1AC007616, AC007613, AC007616
S/G/Y/R/B/O NT_010419AC00761330043563SGC32077    1656.801AC007616, AC007613, AC007616
S/G/Y/R/B/O NT_010419AC00761330045993RH9366416101.01    1AC007616, AC007613, AC007616
S/G/Y/R/B/O NT_010419AC00761330162313RH4896016161.98    1AC007616, AC007613, AC007616
S/G/Y/R/B/O NT_010419AC00761330356673RH6777616113.61    1 AC007613
S/G/Y/R/B/O NT_010419AC00761330759503RH6832816163.70    1AC007226, AC007226, AC007613, AC010654
S/G/Y/R/B/O NT_010419AC00761330815893RH6868516165.50    1AC007226, AC007226, AC007613, AC010654
S/G/Y/R/B/O NT_010419AC00761330816163RH41759  16549.00  1AC007226, AC007226, AC007613, AC010654
S/G/Y/R/B/O NT_010419AC00761330816163RH545751699.34  1660.201AC007226, AC007226, AC007613, AC010654
S/G/Y/R/B/O NT_010419AC00722631452063RH1786416163.78    1 AC009048, AC010654
S/G/Y/R/B/O NT_010419AC00722631937393RH6929416164.45    1 AC010654
S/G/Y/R/B/O NT_010419AC00722631939563RH1602916101.01    1AC007216, AC007216, AC007226, AC009048, AC010654, U95742
S/G/Y/R/B/O NT_010419AC00722631947213RH984216163.82    1AC007216, AC007216, AC007226, AC009048, AC010654, U95742
S/G/Y/R/B/O NT_010419AC00722631982263RH5458316116.77  1655.901AC007216, AC007216, AC007226, AC009048, AC010654, U95742
S/G/Y/R/B/O NT_010419AC00721632019073RH6722716115.22    1 AC007216, AC009048, U95742
S/G/Y/R/B/O NT_010419AC00721632124473RH10411716111.26    1 AC007216, AC009048, U95742
S/G/Y/R/B/O NT_010419AC00721632322613RH5477216116.88  1655.701 AC007216, AC009048, U95742
S/G/Y/R/B/O NT_010419AC00721632767603RH31362  16554.00  1 U95742
S/G/Y/R/B/O NT_010419AC00721632767603RH4274116133.48    1 U95742
S/G/Y/R/B/O NT_010419AC00721632929313RH7097916164.37    1 AB052772, AC007216, U95742, Z29574
S/G/Y/R/B/O NT_010419AC00721632931933RH1894  16549.00  1 AB052772, AC007216, U95742, Z29574
S/G/Y/R/B/O NT_010419AC00721633429483WI-3711    1656.301AC007601, AC007216, AC007601, AC034281
S/G/Y/R/B/O NT_010419AC00760133708703CHLC.ATA3A07    1655.701 AC007601, AC034281
S/G/Y/R/B/O NT_010419AC00760134786763RH14535  16563.00  1 AC007601
S/G/Y/R/B/O NT_010419AC00760134786763SGC31085    1657.001 AC007601
S/G/Y/R/B/O NT_010419AC09236535368903AFMA134VC9    1661.701 AC037438, AC092365
S/G/Y/R/B/O NT_010419AC09236535412783RH9268416164.45    1 AC037438, AC092365
S/G/Y/R/B/O NT_010419AC09236535568623WI-9382    1661.801 AC092365
S/G/Y/R/B/O NT_010419AC09236536240953RH6979616164.45    1 AC092365
S/G/Y/R/B/O NT_010419AC09236536430643RH5456116161.49  1657.902U95737, AC009172, AC092365, U95737
S/G/Y/R/B/O NT_010419AC00759837780143RH5480816161.61  1658.801 AC007598, AC007612, AC007612, AC009172
S/G/Y/R/B/O NT_010419U9573737999403RH5456116161.49  1657.902AC092365, AC009172, AC092365, U95737
S/G/Y/R/B/O NT_010419U9573738525123RH14320  16594.00  1 AC007612, U95737
S/G/Y/R/B/O NT_010419AC01033338967193RH2611316168.69    1 AC010333
S/G/Y/R/B/O NT_010419AC01033338981753RH6630916168.57    1 AC010333
S/G/Y/R/B/O NT_010419AC01033338994013RH1703316163.82    1 AC010333
S/G/Y/R/B/O NT_010419AC01033339890203SGC34336    1670.801 AC010333, AC068151
S/G/Y/R/B/O NT_010419AC01033339893003SGC32705    1667.901 AC010333, AC068151
S/G/Y/R/B/O NT_010419AC10959740337733          
S/G/Y/R/B/O NT_010419AC09232442507243RH31364  16602.00  1AC092380, AC092324, AC092380
S/G/Y/R/B/O NT_010419AC09238042654153          
S/G/Y/R/B/O NT_010419AC00913445255093CHLC.GCT3B11    1664.501 AC009134, AC012628, U91325
S/G/Y/R/B/O NT_010419AC00311945742433          
S/G/Y/R/B/O NT_010419AC00300946487823          


  NT_010419 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010419U9131948881673RH7010116165.26    1 U91319
S/G/Y/R/B/O NT_010419AF00155149045173          
S/G/Y/R/B/O NT_010419 - RH14098  16484.00  1AC007595, AC074136, AC007595, AC074136, AC083992
S/G/Y/R/B/O NT_010419 - RH14263  16495.00  0  
S/G/Y/R/B/O NT_010419 - RH1824  16426.00  1AC016139, AC027277, AC016139, AC027277
S/G/Y/R/B/O NT_010419 - RH241  16436.00  1AC007596, AC017012, AC022168, AC079415, AC007596, AC017012, AC022168, AC079415
S/G/Y/R/B/O NT_010419 - RH31361  16516.00  0  
S/G/Y/R/B/O NT_010419 - RH31363  16594.00  0AC007598, AC007598, AC007612, AC007612, AC009172
S/G/Y/R/B/O NT_010419 - RH32561  16479.00  1AC009121, AC009121
S/G/Y/R/B/O NT_010419 - RH33839  16469.00  1AC007014, AC007493, AC007014, AC007493
S/G/Y/R/B/O NT_010419 - RH34289  16464.00  1AC007014, AC007014
S/G/Y/R/B/O NT_010419 - RH41724  16479.00  1AC009121, AC025285, AC009121, AC025285
S/G/Y/R/B/O NT_010419 - RH8312  16479.00  1AC009121, U15422, AC009121, U15422, Z46940