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  Chromosome 16 - RH Maps - Single Contig
 

Chromosome 16 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010422
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010422AC092347864203071RH7816  163779.00  1AC026469, AC092341, AC026469, AC092341, AC092347
S/G/Y/R/B/O NT_010422AC026469864935493RH6849816472.40    1 AC026469
S/G/Y/R/B/O NT_010422AC026469865385423RH5453116473.44  16334.101 AC026469
S/G/Y/R/B/O NT_010422AC026469865397903RH1058916473.02    1 AC026469
S/G/Y/R/B/O NT_010422AC026469865398153RH3689216480.71    1 AC026469
S/G/Y/R/B/O NT_010422AC026469865399073RH1196716474.58    1 AC026469
S/G/Y/R/B/O NT_010422AC092275865876662          
S/G/Y/R/B/O NT_010422AC092377867521312RH7923  163771.00  1AC023264, AC092275, AC023264, AC092275, AC092377
S/G/Y/R/B/O NT_010422AC092377868162192RH5467816474.58  16333.201 AC092377
S/G/Y/R/B/O NT_010422AC092377869214242RH5485516474.58  16334.901AC023264, AC023264, AC092377
S/G/Y/R/B/O NT_010422AC023264869335831          
S/G/Y/R/B/O NT_010422AC092341869421582          
S/G/Y/R/B/O NT_010422AC025280869808053RH31388  163708.00  1AC092341, AC092347, AC092341, AC092347
S/G/Y/R/B/O NT_010422AC025280869818873RH5475616470.88  16331.401AC092341, AC092347, AC025280, AC092341, AC092347
S/G/Y/R/B/O NT_010422AC025280869901973RH1555016470.58    1 AC025280
S/G/Y/R/B/O NT_010422AC025280870429363RH5459216470.68163700.0016331.501 AC025280
S/G/Y/R/B/O NT_010422AC025280870625053RH6694816470.68    1 AC025280
S/G/Y/R/B/O NT_010422AC009116871115213RH9171116470.68    3AC025280, AL512310, AP000533, AP000534, AC009116, AC025280, AL512310, AP000533, AP000534
S/G/Y/R/B/O NT_010422AC009116871128683RH2700715184.77    1AC025280, AC009116, AC025280
S/G/Y/R/B/O NT_010422AC009116872070663CHLC.GATA88C02    15334.101 AC009116
S/G/Y/R/B/O NT_010422AC009116872071243CHLC.GATA86C08    16331.501 AC009116
S/G/Y/R/B/O NT_010422AC092320888795361RH4821016465.22    1 AC019348, AC092320
S/G/Y/R/B/O NT_010422AC010732872720381          
S/G/Y/R/B/O NT_010422AC098804872732533          
S/G/Y/R/B/O NT_010422AC087189875309513RH405416469.16  16329.901AC009142, AC009142, AC087189
S/G/Y/R/B/O NT_010422AC009142875363143          
S/G/Y/R/B/O NT_010422AC092340876888873          
S/G/Y/R/B/O NT_010422AC106814878790183RH9236616468.85    1AC009063, AC009063, AC106814
S/G/Y/R/B/O NT_010422AC009063879969093RH10379316463.77    1AC009036, AC012320, AC009036, AC009063, AC012320
S/G/Y/R/B/O NT_010422AC012320880609783RH37869  163641.00  1AC009036, AC009119, AC009036, AC009119, AC012320
S/G/Y/R/B/O NT_010422AC012320880661783RH5473416466.12163625.0016329.901AC009036, AC009119, AC009036, AC009119, AC012320
S/G/Y/R/B/O NT_010422AC012320880669123RH5485216464.87  16329.901AC009036, AC009119, AC009036, AC009119, AC012320
S/G/Y/R/B/O NT_010422AC012320880675053RH1592816466.43    1AC009036, AC009119, AC009036, AC009119, AC012320
S/G/Y/R/B/O NT_010422AC012320880818933RH6544616466.72    1AC009036, AC009119, AC009036, AC009119, AC012320
S/G/Y/R/B/O NT_010422AC012320880826603RH5462916466.12163625.0016329.901AC009036, AC009119, AC009036, AC009119, AC012320
S/G/Y/R/B/O NT_010422AC012320880836923RH5461716466.72  16331.601AC009036, AC009119, AC009036, AC009119, AC012320
S/G/Y/R/B/O NT_010422AC009036881570983RH5454116464.14  16329.901AC009119, AC009036, AC009119
S/G/Y/R/B/O NT_010422AC009119881870202RH5460916465.33  16329.901 AC009119
S/G/Y/R/B/O NT_010422AC009119881971722RH5454416466.72163632.0016329.901 AC009119
S/G/Y/R/B/O NT_010422AC040169882378452RH5487116467.94  16329.901AC009119, AC009119, AC040169
S/G/Y/R/B/O NT_010422AC040169883261742RH5473516466.12  16329.901 AC040169
S/G/Y/R/B/O NT_010422AC040169883262232RH6732016464.87    1 AC040169
S/G/Y/R/B/O NT_010422AC040169883263242RH5460416466.12  16329.901 AC040169
S/G/Y/R/B/O NT_010422AC040169883264972RH1744516464.87    1 AC040169
S/G/Y/R/B/O NT_010422AC040169883291842RH2720516464.87    1 AC040169
S/G/Y/R/B/O NT_010422AC040169883335142RH5472316468.04  16329.901 AC040169
S/G/Y/R/B/O NT_010422AC040169883946872RH5460116466.12  16329.901 AC040169
S/G/Y/R/B/O NT_010422AC040169883960142RH33701  163650.00  1 AC040169
S/G/Y/R/B/O NT_010422AC040169883961632RH5455616464.87  16329.901 AC040169
S/G/Y/R/B/O NT_010422AC009123884499853RH6960316464.87    1 AC009123


  NT_010422 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010422AC009123884500813RH5456416464.81  16329.901 AC009123
S/G/Y/R/B/O NT_010422AC009123884502663RH1765016464.87    1 AC009123
S/G/Y/R/B/O NT_010422AC009123885273383RH9289416464.87    1AC010551, AC009123, AC010551
S/G/Y/R/B/O NT_010422AC009123885678103RH9313916464.87    1AC010551, AC009123, AC010551
S/G/Y/R/B/O NT_010422AC009123886017583RH10245216466.12    1AC010551, AC009123, AC010551
S/G/Y/R/B/O NT_010422AC010551886093752          
S/G/Y/R/B/O NT_010422AC022165887306433RH3654716465.22    1AC010732, AC010732, AC022165
S/G/Y/R/B/O NT_010422AC022165887309673RH5458516470.68  16331.501AC010732, AC010732, AC022165
S/G/Y/R/B/O NT_010422AC022165887326283WI-6475    16331.401AC010732, AC010732, AC022165
S/G/Y/R/B/O NT_010422AC022165887356573SGC31818    16331.501AC010732, AC010732, AC022165
S/G/Y/R/B/O NT_010422AC022165887357093RH7478016470.58    1AC010732, AC010732, AC022165
S/G/Y/R/B/O NT_010422AC022165887481543RH7607816464.09    1 AC022165
S/G/Y/R/B/O NT_010422AC022165887497513RH8852  163668.00  1AC010732, AC010732, AC022165, AC092145
S/G/Y/R/B/O NT_010422AC022165888380003RH5479316472.92  16331.501AC010732, AC092320, AC010732, AC019348, AC022165, AC092145, AC092320
S/G/Y/R/B/O NT_010422 - RH1645516467.94    1AC092142, AC092142
S/G/Y/R/B/O NT_010422 - RH1033  163617.00  1AC009028, AC009028
S/G/Y/R/B/O NT_010422 - WI-6450    16331.601AC009028, AC099506, AC009028, AC021787, AC099506
S/G/Y/R/B/O NT_010422 - RH406416467.94    1AC009028, AC009028
S/G/Y/R/B/O NT_010422 - RH13775  163704.00  1AC010531, AC105429, AC010531, AC103885, AC105429
S/G/Y/R/B/O NT_010422 - WI-11335    16331.601AC007411, AC092135, AC099480, AC099483, AC007411, AC092135, AC099480, AC099483
S/G/Y/R/B/O NT_010422 - RH5454816466.72    1AC092142, AC092142
S/G/Y/R/B/O NT_010422 - RH31387  163548.00  1AC009148, AC009148
S/G/Y/R/B/O NT_010422 - RH7908  163597.00  1AC009140, AC092142, AC009140, AC084796, AC092142
S/G/Y/R/B/O NT_010422 - RH5478216472.92  16334.900  
S/G/Y/R/B/O NT_010422 - RH5480916468.04    1AC092142, AC092142
S/G/Y/R/B/O NT_010422 - RH9111516472.40    0  
S/G/Y/R/B/O NT_010422 - RH9204116474.58    1AC013513, AC040170, AC092327, AC013513, AC040170, AC092327
S/G/Y/R/B/O NT_010422 - RH9412816464.60    1AC009100, AC099524, AC009100, AC099524
S/G/Y/R/B/O NT_010422 - RH9819916472.92    0  
S/G/Y/R/B/O NT_010422 - RH9857716467.94    1AC092135, AC099480, AC099483, AC092135, AC099480, AC099483