Chromosome 19 - RH Maps - Single Contig

Chromosome 19 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_025920	NT_030867	NT_011227	NT_030171	NT_011277	NT_011269	NT_011268	NT_011258
NT_030869	NT_011271	NT_011255	NT_011274	NT_011316	NT_011145	NT_031917	NT_029485
NT_025133	NT_011176	NT_031915	NT_011151	NT_025155	NT_011290	NT_025130	NT_011281
NT_011141	NT_030861	NT_011288	NT_011295	NT_033318	NT_027203	NT_031920	NT_026483
NT_033317	NT_033315	NT_025183	NT_025175	NT_025197	NT_030182	NT_025922	NT_030862
NT_011196	NT_011294	NT_011296	NT_011192	NT_011233	NT_011250	NT_011139	NT_011266
NT_011109	NT_033313	NT_033316	NT_011091	NT_011148	NT_025184	NT_011225	NT_011150
NT_011104

NT_011266

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_011266	AC018758	57035017	3	RH76525	12	46.39					3	AC007905, AC007954, AC008397, AC008623, AC026783, AC099491, AC107068, AP000246, AP003532,	AC007905, AC007954, AC008397, AC008623, AC018758, AC026783, AC099491, AC107068, AP000246, AP001857, AP003532
S/G/Y/R/B/O	NT_011266	AC018758	57037809	3	RH92107	19	247.63					1		AC018758
S/G/Y/R/B/O	NT_011266	AC018758	57080310	3	RH75352	19	245.11					1		AC018758, AC068785
S/G/Y/R/B/O	NT_011266	AC018758	57080451	3	RH39166	19	246.22					1		AC018758, AC068785
S/G/Y/R/B/O	NT_011266	AC018758	57093853	3	RH45570	19	245.61					1		AC018758, AC068785
S/G/Y/R/B/O	NT_011266	AC018758	57162576	3	D19S408					19	327.60	1		AC018758, AC068785
S/G/Y/R/B/O	NT_011266	AC018758	57162716	3	RH17697	19	247.53					1	L34079,	AC018758, AC068785, L34079
S/G/Y/R/B/O	NT_011266	AC018758	57162790	3	RH56019	19	247.53	19	2157.00			1	L34079,	AC018758, AC068785, L34079
S/G/Y/R/B/O	NT_011266	AC018758	57162790	3	SGC30018					19	324.00	1	L34079,	AC018758, AC068785, L34079
S/G/Y/R/B/O	NT_011266	AC018758	57165303	3	RH48808	19	247.53					1	L34079,	AC018758, AC068785, L34079
S/G/Y/R/B/O	NT_011266	L34079	57172967	3
S/G/Y/R/B/O	NT_011266	AC006276	57205406	3	RH55806	19	247.53			19	325.60	1		AC006276, AC068785
S/G/Y/R/B/O	NT_011266	AC006276	57205435	3	RH1735			19	1973.00			1		AC006276, AC068785
S/G/Y/R/B/O	NT_011266	AC006276	57218651	3	RH8076			19	2187.00			1		AC006276, AC068785
S/G/Y/R/B/O	NT_011266	AC006276	57219100	3	RH39198	19	247.53					1		AC006276, AC068785
S/G/Y/R/B/O	NT_011266	AC006276	57219157	3	RH78438	19	244.49					1		AC006276, AC068785
S/G/Y/R/B/O	NT_011266	AC006276	57220291	3	RH55992	19	247.53			19	325.60	1		AC006276, AC068785
S/G/Y/R/B/O	NT_011266	AC006276	57226935	3	RH92367	19	244.49					1		AC006276, AC068785
S/G/Y/R/B/O	NT_011266	AC005525	57239813	3	RH55803	19	247.53	19	2187.00			1		AC005525, AC068785
S/G/Y/R/B/O	NT_011266	AC005525	57239813	3	SGC34531					19	324.00	1		AC005525, AC068785
S/G/Y/R/B/O	NT_011266	AC005525	57239979	3	RH47366	19	247.53					1		AC005525, AC068785
S/G/Y/R/B/O	NT_011266	AC005525	57263003	3	RH48989	19	247.53					1		AC005525
S/G/Y/R/B/O	NT_011266	AC005525	57265748	3	RH55680	19	247.53			19	327.40	1		AC005525
S/G/Y/R/B/O	NT_011266	AC005525	57265748	3	RH9078			19	1983.00			1		AC005525
S/G/Y/R/B/O	NT_011266	AC006953	57268051	3	WI-7093					19	325.60	1		AC006953
S/G/Y/R/B/O	NT_011266	AC006953	57268051	3	RH55927	19	244.49					1		AC006953
S/G/Y/R/B/O	NT_011266	AC006953	57268051	3	RH13915			19	1978.00			1		AC006953
S/G/Y/R/B/O	NT_011266	AC006953	57268103	3	RH11533	19	244.06					1		AC006953
S/G/Y/R/B/O	NT_011266	AC006953	57268167	3	RH9914	19	244.06					1
S/G/Y/R/B/O	NT_011266	AC006953	57282575	3	RH31453			19	2174.00			1		AC006953
S/G/Y/R/B/O	NT_011266	AC005622	57305041	3
S/G/Y/R/B/O	NT_011266	AC004780	57350641	3	RH46988	19	247.53					1	AC023970,	AC004780, AC023970
S/G/Y/R/B/O	NT_011266	AC004780	57350666	3	RH76495	19	250.04					1		AC004780
S/G/Y/R/B/O	NT_011266	AC011520	57381196	3	RH46057	19	247.53					1	AC023970,	AC011520, AC023970
S/G/Y/R/B/O	NT_011266	AC011520	57383457	3	WI-1158					19	325.60	1	AC023970,	AC011520, AC023970
S/G/Y/R/B/O	NT_011266	AC011520	57386007	3	RH55699	19	247.53	19	2200.00			1	AC023970,	AC011520, AC023970, AF305735
S/G/Y/R/B/O	NT_011266	AC011520	57386007	3	SGC33130					19	324.00	1	AC023970,	AC011520, AC023970, AF305735
S/G/Y/R/B/O	NT_011266	AC011520	57386071	3	RH47242	19	247.53					1	AC023970,	AC011520, AC023970, AF305735
S/G/Y/R/B/O	NT_011266	AC011520	57396680	3	RH4539	19	247.53			19	327.40	1	AC023970,	AC011520, AC023970
S/G/Y/R/B/O	NT_011266	AC011520	57396722	3	RH201			19	2227.00			1	AC023970,	AC011520, AC023970
S/G/Y/R/B/O	NT_011266	AC023970	57398925	1
S/G/Y/R/B/O	NT_011266	AC011508	57413251	3	RH76751	19	239.30					3	AC002492, AC023970, AC097375,	AC002492, AC011508, AC023970, AC097375
S/G/Y/R/B/O	NT_011266	AC011508	57468568	3	RH47752	19	247.43					1	AC006213,	AC006213, AC011508
S/G/Y/R/B/O	NT_011266	AC011508	57489694	3	RH32703			19	2253.00			1	AC006213,	AC006213, AC011508
S/G/Y/R/B/O	NT_011266	AC011508	57489694	3	RH55991	19	243.84					1	AC006213,	AC006213, AC011508
S/G/Y/R/B/O	NT_011266	AC011508	57489694	3	SGC33269					19	317.20	1	AC006213,	AC006213, AC011508
S/G/Y/R/B/O	NT_011266	AC006213	57518368	3	RH103652	19	246.12					1		AC006213, AC035150
S/G/Y/R/B/O	NT_011266	AC006213	57608959	3	RH39182	19	243.84					1	AC018725,	AC006213, AC018725
S/G/Y/R/B/O	NT_011266	AC006213	57614339	3	RH101969	19	247.43					1	AC018725,	AC006213, AC018725
S/G/Y/R/B/O	NT_011266	AC018725	57627985	3

NT_011266 (cont)

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_011266	AC067968	57650006	3	SGC35832			19	325.60	1		AC067968
S/G/Y/R/B/O	NT_011266	AC067968	57650006	3	RH55774	19	247.33			1		AC067968
S/G/Y/R/B/O	NT_011266	AC067968	57650163	3	RH12291	19	249.78			1		AC067968
S/G/Y/R/B/O	NT_011266	AC092072	57677893	3	RH39183	19	243.33			1		AC092072
S/G/Y/R/B/O	NT_011266	AC084219	57722858	3	RH55915	19	249.33			1		AC084219
S/G/Y/R/B/O	NT_011266	AC084219	57722858	3	WI-21930			19	322.20	1		AC084219
S/G/Y/R/B/O	NT_011266		-		RH28680	19	248.13			4	AC083805, AC104082, AL117339, AL136526,	AC012264, AC073122, AC083805, AC104082, AL117339, AL136526, AL591107