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  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_030867 NT_011227 NT_030171 NT_011277 NT_011269 NT_011268 NT_011258
NT_030869 NT_011271 NT_011255 NT_011274 NT_011316 NT_011145 NT_031917 NT_029485
NT_025133 NT_011176 NT_031915 NT_011151 NT_025155 NT_011290 NT_025130 NT_011281
NT_011141 NT_030861 NT_011288 NT_011295 NT_033318 NT_027203 NT_031920 NT_026483
NT_033317 NT_033315 NT_025183 NT_025175 NT_025197 NT_030182 NT_025922 NT_030862
NT_011196 NT_011294 NT_011296 NT_011192 NT_011233 NT_011250 NT_011139 NT_011266
NT_011109 NT_033313 NT_033316 NT_011091 NT_011148 NT_025184 NT_011225 NT_011150
NT_011104


  NT_011274
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011274AC00578858219983          
S/G/Y/R/B/O NT_011274AC00533858582223          
S/G/Y/R/B/O NT_011274AC00579058892583RH1266  19210.00  1 AC005790
S/G/Y/R/B/O NT_011274AC00579059114513RH557401935.98  1921.701 AC005790
S/G/Y/R/B/O NT_011274AC00533559226303          
S/G/Y/R/B/O NT_011274AC01149059634003          
S/G/Y/R/B/O NT_011274AC00576460677233          
S/G/Y/R/B/O NT_011274AC00456060954993          
S/G/Y/R/B/O NT_011274AC00576561301403          
S/G/Y/R/B/O NT_011274AC01153361728473RH8581  19212.00  1 AC011533
S/G/Y/R/B/O NT_011274AC01153361728593RH359721935.68    1 AC011533
S/G/Y/R/B/O NT_011274AC01153361749623RH699811935.68    1 AC011533
S/G/Y/R/B/O NT_011274AC09305961921423          
S/G/Y/R/B/O NT_011274AC00461162016743RH13853  19219.00  1 AC004611
S/G/Y/R/B/O NT_011274AC00461162192593RH806551935.68    1 AC004611, AL356352
S/G/Y/R/B/O NT_011274AC00461162293273RH420001934.25    1 AC004611, AL356352
S/G/Y/R/B/O NT_011274AC00461162372463RH253611934.07    1 AC004611
S/G/Y/R/B/O NT_011274AC02321762417581          
S/G/Y/R/B/O NT_011274AC01149163223463RH558071935.88  1922.701 AC011491
S/G/Y/R/B/O NT_011274AC01149163223463RH32240  19216.00  1 AC011491
S/G/Y/R/B/O NT_011274AC01149163284513RH656071935.78    1 AC011491
S/G/Y/R/B/O NT_011274AC01149163333363RH477621935.78    1  
S/G/Y/R/B/O NT_011274AC01149163336773RH558871935.78  1924.101 AC011491
S/G/Y/R/B/O NT_011274AC01149163336773RH33603  19241.00  1 AC011491
S/G/Y/R/B/O NT_011274AC01149163336933RH759771939.00    1 AC011491
S/G/Y/R/B/O NT_011274AC01149163337433RH392071935.18    1 AC011491
S/G/Y/R/B/O NT_011274AC01149163339083RH678941935.88    1 AC011491
S/G/Y/R/B/O NT_011274AC01149163667923RH390951935.68    1 AC011491, AC016331
S/G/Y/R/B/O NT_011274AC01149163671043RH159121935.78    1 AC011491, AC016331
S/G/Y/R/B/O NT_011274AC01149163674953RH747811935.78    1 AC011491, AC016331
S/G/Y/R/B/O NT_011274AC01153963709422          
S/G/Y/R/B/O NT_011274AC02534363832881          
S/G/Y/R/B/O NT_011274AC01050364337733RH390971935.78    1 AC010503, AC016331
S/G/Y/R/B/O NT_011274AC01050364583193RH666641935.78    1 AC010503, AC016331, X00734
S/G/Y/R/B/O NT_011274AC01050364583653RH107361935.68    1 AC010503, AC016331, X00734
S/G/Y/R/B/O NT_011274AC01050364990113RH559361938.82  1923.601 AC010503, AC016331
S/G/Y/R/B/O NT_011274AC01050364990113RH33578  19229.00  1 AC010503, AC016331
S/G/Y/R/B/O NT_011274AC00876065500163RH390781938.82    1AC025343, AC008760, AC025343
S/G/Y/R/B/O NT_011274AC00876066418143RH557231940.35  1925.801AC025343, AC008760, AC025343
S/G/Y/R/B/O NT_011274AC00876066418673RH454031940.35    1AC025343, AC008760, AC025343, J04763
S/G/Y/R/B/O NT_011274AC00876066419143RH117181940.35    1AC025343, AC008760, AC025343, J04763
S/G/Y/R/B/O NT_011274AC00876066461243RH802101952.59    1AC025343, AC008760, AC025343
S/G/Y/R/B/O NT_011274AC00876066940373RH557521940.35  1925.801AC025343, AC008760, AC025343, AC027726
S/G/Y/R/B/O NT_011274AC00876067151523RH753611940.18    1AC020954, AC008576, AC008760, AC020954, AC027726
S/G/Y/R/B/O NT_011274AC00876067151693RH802271940.66    1AC020954, AC008576, AC008760, AC020954, AC027726
S/G/Y/R/B/O NT_011274AC00876067153123RH982591940.35    1AC020954, AC008576, AC008760, AC020954, AC027726
S/G/Y/R/B/O NT_011274AC00876067162813RH989241940.35    1AC020954, AC008576, AC008760, AC020954, AC027726
S/G/Y/R/B/O NT_011274AC00876067163853RH1033551940.35    1AC020954, AC008576, AC008760, AC020954, AC027726
S/G/Y/R/B/O NT_011274AC02095467284523          
S/G/Y/R/B/O NT_011274AC02215667534633          


  NT_011274 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011274AC01064767746303          
S/G/Y/R/B/O NT_011274AC02089568210643RH808571940.39    1 AC008576, AC020895, AC027726
S/G/Y/R/B/O NT_011274AC02089569040113SGC35395    1927.701 AC008576, AC020895
S/G/Y/R/B/O NT_011274AC02089569040113RH557941941.59    1 AC008576, AC020895
S/G/Y/R/B/O NT_011274AC02089569040113RH33591  19235.00  1 AC008576, AC020895
S/G/Y/R/B/O NT_011274AC02089569040383RH392101941.59    1AC025278, AC008576, AC020895, AC025278
S/G/Y/R/B/O NT_011274AC02089569042123RH255021940.45    1AC025278, AC008576, AC020895, AC025278
S/G/Y/R/B/O NT_011274AC02527869445181          
S/G/Y/R/B/O NT_011274AC02116574556631RH916561934.58    2AC024592, AC010454, AC021165, AC024592
S/G/Y/R/B/O NT_011274AC01149969951991RH985171934.07    1AC021165, AC011499, AC021165
S/G/Y/R/B/O NT_011274AC01149970434011RH933021934.66    1 AC011499, AL356352
S/G/Y/R/B/O NT_011274AC01149971028151RH780431934.66    1 AC011499, AL356352
S/G/Y/R/B/O NT_011274AC01149974937671RH475551934.56    1 AC011499
S/G/Y/R/B/O NT_011274AC01149975018581RH271181934.07    1 AC011499, AL356352
S/G/Y/R/B/O NT_011274AC01149975022511RH159131934.66    1 AC011499, AL356352
S/G/Y/R/B/O NT_011274AC01149975034951RH475361934.07    1 AC011499, AL356352
S/G/Y/R/B/O NT_011274AC01144471300043RH418781935.78    1 AC011444
S/G/Y/R/B/O NT_011274AC00578472297603RH14167  29528.00  1AC011444, AC005784, AC011444, AL159157
S/G/Y/R/B/O NT_011274AC00578472308363RH483631935.78    1AC011444, AC005784, AC011444
S/G/Y/R/B/O NT_011274AC09305072690453          
S/G/Y/R/B/O NT_011274AC00460273069443SGC31821    1923.101AC021165, AC004602, AC021165
S/G/Y/R/B/O NT_011274AC00460273088863RH781721935.78    1 AC004602
S/G/Y/R/B/O NT_011274AC10453273089573          
S/G/Y/R/B/O NT_011274AC02459273297803RH391261935.78    1 AC010454
S/G/Y/R/B/O NT_011274AC02459273585853RH916571935.68    1AC021165, AC010454, AC021165
S/G/Y/R/B/O NT_011274AC02459273814193RH916561934.58    2AC021165, AC010454, AC021165, AC024592
S/G/Y/R/B/O NT_011274AC02459273931413RH558811939.03  1923.101AC021165, AC010454, AC021165, AC024592
S/G/Y/R/B/O NT_011274 - RH391151935.98    0  
S/G/Y/R/B/O NT_011274 - RH391351934.68    0  
S/G/Y/R/B/O NT_011274 - RH472241935.78    0AC005784, AC005784
S/G/Y/R/B/O NT_011274 - RH478251934.68    0  
S/G/Y/R/B/O NT_011274 - RH559511934.66  1922.000AC011499, AC011499, AL356352
S/G/Y/R/B/O NT_011274 - RH656591934.68    0 AC021618
S/G/Y/R/B/O NT_011274 - WI-20279    1922.101AC011471, AC011471
S/G/Y/R/B/O NT_011274 - RH665351934.68    0  
S/G/Y/R/B/O NT_011274 - RH751651935.68    0  
S/G/Y/R/B/O NT_011274 - RH802471938.62    1AC022517, AC021618, AC022517
S/G/Y/R/B/O NT_011274 - RH804771933.97    0  
S/G/Y/R/B/O NT_011274 - RH931171935.68    1AC011471, AC011471
S/G/Y/R/B/O NT_011274 - RH937601935.78    0  
S/G/Y/R/B/O NT_011274 - RH938121941.03    0AC008878, AC008878