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  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_030867 NT_011227 NT_030171 NT_011277 NT_011269 NT_011268 NT_011258
NT_030869 NT_011271 NT_011255 NT_011274 NT_011316 NT_011145 NT_031917 NT_029485
NT_025133 NT_011176 NT_031915 NT_011151 NT_025155 NT_011290 NT_025130 NT_011281
NT_011141 NT_030861 NT_011288 NT_011295 NT_033318 NT_027203 NT_031920 NT_026483
NT_033317 NT_033315 NT_025183 NT_025175 NT_025197 NT_030182 NT_025922 NT_030862
NT_011196 NT_011294 NT_011296 NT_011192 NT_011233 NT_011250 NT_011139 NT_011266
NT_011109 NT_033313 NT_033316 NT_011091 NT_011148 NT_025184 NT_011225 NT_011150
NT_011104


  NT_033316
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033316AC010458618680033RH5577119265.99  19344.401 AC010458
S/G/Y/R/B/O NT_033316AC010458618680043RH1018619265.72    1 AC010458
S/G/Y/R/B/O NT_033316AC010458618680993RH2560619266.31    1 AC010458
S/G/Y/R/B/O NT_033316AC010458619355953RH13945  192459.0019341.901AC011466, AC010458, AC011212, AC011466
S/G/Y/R/B/O NT_033316AC010458619355953RH5590719255.29    1AC011466, AC010458, AC011212, AC011466
S/G/Y/R/B/O NT_033316AC011466620176513RH9333219255.29    1 AC011212, AC011466
S/G/Y/R/B/O NT_033316AC011466620233073RH5594519266.31192459.0019341.901 AC011212, AC011466
S/G/Y/R/B/O NT_033316AC011466620234133RH1660719266.52    1 AC011212, AC011466
S/G/Y/R/B/O NT_033316AC011466620309393RH5589619266.73  19343.401 AC011212, AC011466
S/G/Y/R/B/O NT_033316AC011466620584323RH8066  192461.00  1 AC011466
S/G/Y/R/B/O NT_033316AC008392621166303RH10408619266.73    1 AC008392, AC027218
S/G/Y/R/B/O NT_033316AC008392621504953RH4486819266.31    1AC020955, AC008392, AC020955, AC027218, AC073131
S/G/Y/R/B/O NT_033316AC008392621526263RH10235819255.29    1AC020955, AC008392, AC020955, AC027218, AC073131
S/G/Y/R/B/O NT_033316AC020955621555573          
S/G/Y/R/B/O NT_033316AC011514621891753WI-10353    19342.001 AC011514, AC027218, AC073131
S/G/Y/R/B/O NT_033316AC011514622027473WI-19271    19342.501 AC011514, AC027218
S/G/Y/R/B/O NT_033316AC011514622027473RH5582219255.29    1 AC011514, AC027218
S/G/Y/R/B/O NT_033316AC011514622031443RH5568119266.31  19339.401 AC011514, AC027218, AC073131
S/G/Y/R/B/O NT_033316AC011527622123853          
S/G/Y/R/B/O NT_033316AC008403622649403RH9244919265.99    1 AC008403, AC073131
S/G/Y/R/B/O NT_033316AC008403622738513RH1200019266.31    1 AC008403, AC073131
S/G/Y/R/B/O NT_033316AC008403622869563RH7798819266.73    1 AC008403, AC073131
S/G/Y/R/B/O NT_033316AC008403622993263RH6695719268.85    1 AC008403, AC073131
S/G/Y/R/B/O NT_033316AC008403622993683RH7589819266.31    1 AC008403, AC073131
S/G/Y/R/B/O NT_033316AC008403623305133RH6674419266.73    1 AC008403, AC073131
S/G/Y/R/B/O NT_033316AC022154624355823WI-1419    19336.901 AB061825, AC022154, AC040922
S/G/Y/R/B/O NT_033316AC022154624355823RH5597519255.40    1 AB061825, AC022154, AC040922
S/G/Y/R/B/O NT_033316AC022154624402943RH33802  192473.0019342.001 AC022154, AC040922
S/G/Y/R/B/O NT_033316AC022154624402943RH5591919255.29    1 AC022154, AC040922
S/G/Y/R/B/O NT_033316AC022154624501863RH4721319265.99    1AC008888, AC008888, AC022154, AC040922
S/G/Y/R/B/O NT_033316AC008888625420542WI-11897    19344.401 AC008888, AC024740, AC040922
S/G/Y/R/B/O NT_033316AC008888625420542RH454919265.04    1 AC008888, AC024740, AC040922
S/G/Y/R/B/O NT_033316AC008888625420572RH2554119266.73    1 AC008888, AC024740, AC040922
S/G/Y/R/B/O NT_033316AC008888625420682RH5580919266.73  19343.301 AC024740
S/G/Y/R/B/O NT_033316AC009002625695983RH7893719266.73    1 AC009002, AC024740
S/G/Y/R/B/O NT_033316AC009002625712463RH3908719265.99    1 AC009002, AC024740
S/G/Y/R/B/O NT_033316AC009002625714233RH33577  192488.00  1 AC009002, AC024740
S/G/Y/R/B/O NT_033316AC026803626165332RH5597219268.64  19345.201 AC008749, AC024740, AC026803
S/G/Y/R/B/O NT_033316AC026803626586762RH10321319255.29    1 AC008749, AC024740, AC026803
S/G/Y/R/B/O NT_033316AC026803626587262RH3916919268.28    1 AC024740, AC026803
S/G/Y/R/B/O NT_033316AC026803626973892RH8109219268.00    1 AC008749, AC024740, AC026803
S/G/Y/R/B/O NT_033316AC026803626973992RH7142019267.37    1 AC008749, AC024740, AC026803
S/G/Y/R/B/O NT_033316AC026803626974132RH3913419267.54    1 AC008749, AC024740, AC026803
S/G/Y/R/B/O NT_033316AC026803627402752RH10256519266.73    1 AC008749, AC026803
S/G/Y/R/B/O NT_033316AC026803627442322RH10183119269.77    1 AC008749, AC026803
S/G/Y/R/B/O NT_033316AC026803627446442RH3657319267.37    1 AC008749, AC026803
S/G/Y/R/B/O NT_033316AC026803627830912RH4723319268.82    1 AC008749, AC026803
S/G/Y/R/B/O NT_033316AC026803627881262RH1380  20184.00  2 AC008749
S/G/Y/R/B/O NT_033316AC026803627882532RH32609  19232.00  1AL031670, AC026803, AL031670
S/G/Y/R/B/O NT_033316AC026803627904342RH2025  192488.00  1 AC008749


  NT_033316 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033316AC098792628072713          
S/G/Y/R/B/O NT_033316AC008687628371853RH5598519267.96  19342.101 AC008687, NG_000019
S/G/Y/R/B/O NT_033316AC008687628372063RH4749219266.84    1 AC008687, NG_000019
S/G/Y/R/B/O NT_033316AC008687628827063RH8080719270.36    1 AC008687, NG_000019
S/G/Y/R/B/O NT_033316AC008687628827133RH4696019270.78    1 AC008687, NG_000019
S/G/Y/R/B/O NT_033316AC008687629299903RH1147119269.13    1 AC008687, M57939
S/G/Y/R/B/O NT_033316AC096864629678723          
S/G/Y/R/B/O NT_033316AC008891630331213RH5587719269.45  19349.401 AC008891, AC068786
S/G/Y/R/B/O NT_033316AC011450631113633RH10255119266.84    1 AC011450
S/G/Y/R/B/O NT_033316AC011450631273393RH5586819269.53192520.0019348.401 AC011450, AC068786
S/G/Y/R/B/O NT_033316AC011450631444243RH5569719269.56  19349.201 AC011450, AC068786
S/G/Y/R/B/O NT_033316AC011450631617943RH5591419268.85  19347.201AC010524, AC068670, AC010524, AC011450, AC068670, AC068786
S/G/Y/R/B/O NT_033316AC011450631618423RH7540319270.18    1AC010524, AC068670, AC010524, AC011450, AC068670, AC068786
S/G/Y/R/B/O NT_033316AC011450631621863RH9309219270.08    1AC010524, AC068670, AC010524, AC011450, AC068670, AC068786
S/G/Y/R/B/O NT_033316AC010524631712613          
S/G/Y/R/B/O NT_033316AC010643631977483          
S/G/Y/R/B/O NT_033316AC068670632511741RH5598819269.56  19344.101 AC068670
S/G/Y/R/B/O NT_033316AC068670632512611RH1175819269.02    1AC010619, AC010619, AC068670
S/G/Y/R/B/O NT_033316AC010619632374872RH10412319272.79    1AC068670, AC010619, AC068670
S/G/Y/R/B/O NT_033316AC010619632393372RH9207519269.77    1AC068670, AC010619, AC068670
S/G/Y/R/B/O NT_033316AC010619632681062RH5587219268.11  19349.901AC068670, AC010619, AC068670
S/G/Y/R/B/O NT_033316AC010619632681672RH1614019267.69    1AC068670, AC068670
S/G/Y/R/B/O NT_033316AC010619633078802RH3917319270.88    1AC068670, AC010619, AC068670
S/G/Y/R/B/O NT_033316AC010619633118052WI-1425    19354.102AC012617, AC068670, AB028893, AC010619, AC012617, AC068670
S/G/Y/R/B/O NT_033316AC010619633118052RH5570219307.75    2AC012617, AC068670, AB028893, AC010619, AC012617, AC068670
S/G/Y/R/B/O NT_033316AC010619633472582RH10371519269.13    1 AC010619, AF200220, AF220542
S/G/Y/R/B/O NT_033316AC010619633482962RH14121  192530.00  1 AC010619, AF200220, AF220542
S/G/Y/R/B/O NT_033316AC010619633655732RH3920019272.69    1 AC010619
S/G/Y/R/B/O NT_033316AC010619633786432RH10340919270.99    1 AC010619
S/G/Y/R/B/O NT_033316AC011495634060793RH4850319269.56    1AC010619, AC010619, AC011495
S/G/Y/R/B/O NT_033316AC011495634807393RH10301319272.69    1 AC011495, AF254411
S/G/Y/R/B/O NT_033316AC011495634818743RH5568219272.79  19347.101 AC011495
S/G/Y/R/B/O NT_033316AC011495634822563RH5579519272.79  19347.001 AC011495
S/G/Y/R/B/O NT_033316AC011495634960223RH3906219270.99    1 AC011495, AF289220
S/G/Y/R/B/O NT_033316AC011495634960603RH5596619272.69  19347.101 AC011495, AF289220
S/G/Y/R/B/O NT_033316AC011495634960683RH1854319272.69    1 AC011495, AF289220
S/G/Y/R/B/O NT_033316AC011495635060123RH6590519270.99    1 AC011495, AF222689
S/G/Y/R/B/O NT_033316AC011495635105023RH7631919270.99    1 AC011495, AF222689
S/G/Y/R/B/O NT_033316AC011495635105303RH9141119269.66    1 AC011495, AF222689
S/G/Y/R/B/O NT_033316AC011495635105753RH6830119266.20    1 AC011495, AF222689
S/G/Y/R/B/O NT_033316AC011495635126823RH9110319269.66    1 AC011495
S/G/Y/R/B/O NT_033316AC011495635358773RH14957  192541.00  1 AC011495
S/G/Y/R/B/O NT_033316AC011495635621683RH7842419272.69    1 AC011495, AF200923
S/G/Y/R/B/O NT_033316AC098783636063373          
S/G/Y/R/B/O NT_033316AC006942636290523RH3904419270.36    1AC021163, AC006942, AC021163, AF289221
S/G/Y/R/B/O NT_033316AC018766636623613RH1781219270.99    1AC021163, AC018766, AC021163
S/G/Y/R/B/O NT_033316AC018766636624133RH1826819270.99    1AC021163, AC018766, AC021163
S/G/Y/R/B/O NT_033316AC018766636629363RH3631719272.69    1AC021163, AC018766, AC021163
S/G/Y/R/B/O NT_033316AC018766636743583RH7483119272.69    1AC021163, AC018766, AC021163, AF238381
S/G/Y/R/B/O NT_033316AC018766636829183RH5593819268.71  19347.102AC021163, AC018766, AC021163, AF354258


  NT_033316 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033316AC018766636835623RH9222419272.69    1AC021163, AC018766, AC021163, AF354258
S/G/Y/R/B/O NT_033316AC021163637086551RH9293819270.78    1 AC021163, AF293463
S/G/Y/R/B/O NT_033316AC011452637269003RH1781  192556.00  1AC021163, AC011452, AC021163
S/G/Y/R/B/O NT_033316AC011452637282603RH7128819272.69    1AC021163, AC011452, AC021163
S/G/Y/R/B/O NT_033316AC011452637509793RH7966819269.56    1AC021163, AC011452, AC021154, AC021163
S/G/Y/R/B/O NT_033316AC011452637536133RH1025719270.88    1AC021163, AC011452, AC021154, AC021163
S/G/Y/R/B/O NT_033316AC011452637966713RH6637319272.69    1 AC011452, AC021154
S/G/Y/R/B/O NT_033316AC011452638063833RH5586719269.56  19347.301 AC011452, AC021154
S/G/Y/R/B/O NT_033316AC010624638552911RH31454  192573.00  1AC011452, AC010624, AC011452, AC021154
S/G/Y/R/B/O NT_033316AC010624638668661RH5574919269.56  19347.301 AC010624, AC021154, AC093518
S/G/Y/R/B/O NT_033316AC010624638669911RH3917219270.88    1 AC010624, AC021154, AC093518
S/G/Y/R/B/O NT_033316AC010624638686741RH9412219270.88    1 AC010624, AC021154, AC093518
S/G/Y/R/B/O NT_033316AC020906639315513          
S/G/Y/R/B/O NT_033316AC010515640306232          
S/G/Y/R/B/O NT_033316AC019157641107651RH8051619271.19    2AC008655, AC008655, AC019157
S/G/Y/R/B/O NT_033316 - RH10223319269.66    0  
S/G/Y/R/B/O NT_033316 - WI-9140    19342.000AC008755, AC008755
S/G/Y/R/B/O NT_033316 - RH10309519266.84    0  
S/G/Y/R/B/O NT_033316 - RH1083219270.99    0  
S/G/Y/R/B/O NT_033316 - RH3648819269.34    0  
S/G/Y/R/B/O NT_033316 - RH3666819268.53    0AC073548, AC073548, AF243529
S/G/Y/R/B/O NT_033316 - RH3907519269.13    0AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, NG_000019, NG_000019, NG_000019, NG_000019, NG_000019, NG_000019
S/G/Y/R/B/O NT_033316 - RH4652119269.66    0AC011452, AC011452
S/G/Y/R/B/O NT_033316 - RH6661119269.13    0AC010619, AB028893, AC010619
S/G/Y/R/B/O NT_033316 - RH7142619269.02    0AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, AC008687, NG_000019, NG_000019, NG_000019, NG_000019, NG_000019, NG_000019
S/G/Y/R/B/O NT_033316 - RH7143919268.21    0  
S/G/Y/R/B/O NT_033316 - RH7478919269.02    0  
S/G/Y/R/B/O NT_033316 - RH7865619272.69    0  
S/G/Y/R/B/O NT_033316 - RH7876019272.79    0  
S/G/Y/R/B/O NT_033316 - RH8092519268.21    0  
S/G/Y/R/B/O NT_033316 - RH9136219267.37    0AC026803, AC008749, AC024740, AC026803
S/G/Y/R/B/O NT_033316 - RH9351619272.69    0  
S/G/Y/R/B/O NT_033316 - RH9390719272.79    0  
S/G/Y/R/B/O NT_033316 - RH9850819272.79    0  
S/G/Y/R/B/O NT_033316 - RH9876819269.66    0