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  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_030867 NT_011227 NT_030171 NT_011277 NT_011269 NT_011268 NT_011258
NT_030869 NT_011271 NT_011255 NT_011274 NT_011316 NT_011145 NT_031917 NT_029485
NT_025133 NT_011176 NT_031915 NT_011151 NT_025155 NT_011290 NT_025130 NT_011281
NT_011141 NT_030861 NT_011288 NT_011295 NT_033318 NT_027203 NT_031920 NT_026483
NT_033317 NT_033315 NT_025183 NT_025175 NT_025197 NT_030182 NT_025922 NT_030862
NT_011196 NT_011294 NT_011296 NT_011192 NT_011233 NT_011250 NT_011139 NT_011266
NT_011109 NT_033313 NT_033316 NT_011091 NT_011148 NT_025184 NT_011225 NT_011150
NT_011104


  NT_011233
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011233AC093235507631673          
S/G/Y/R/B/O NT_011233AC008806507941353RH1594419219.59    1AC093235, AC008806, AC016590, AC093235
S/G/Y/R/B/O NT_011233AC008806508232263CHLC.GATA50E06    19287.001 AC008806
S/G/Y/R/B/O NT_011233AC008806508411083RH38249  191696.00  1 AC008806
S/G/Y/R/B/O NT_011233AC008806508412663RH9121619236.40    1 AC008806
S/G/Y/R/B/O NT_011233AC022148509271133RH5585419223.33191663.0019287.901 AC022148
S/G/Y/R/B/O NT_011233AC022148509731443RH9267819223.33    1 AC022148
S/G/Y/R/B/O NT_011233AC022148510170163RH1232619219.59    1 AC022148
S/G/Y/R/B/O NT_011233AC022148510436543RH5580819223.50  19288.501 AC022148
S/G/Y/R/B/O NT_011233AC022148510738773RH10422419219.59    1AC093227, AC022148, AC093227
S/G/Y/R/B/O NT_011233AC022148510880493WI-5797    19290.901AC093227, AC022148, AC093227
S/G/Y/R/B/O NT_011233AC022148510961133RH9337419219.35    1AC093227, AC022148, AC093227
S/G/Y/R/B/O NT_011233AC093227511583853RH7664219224.73    1 AC007676, AC093227
S/G/Y/R/B/O NT_011233AC093227511682193RH1589919219.35    1 AC007676, AC093227
S/G/Y/R/B/O NT_011233AC016582512570013RH5582819223.40  19295.101 AC016582
S/G/Y/R/B/O NT_011233AC016582512597623RH6708819219.35    1 AC016582
S/G/Y/R/B/O NT_011233AC016582512612223RH1593019219.35    1 AC016582
S/G/Y/R/B/O NT_011233AC008395513702253D19S220    19304.701 AC008395, AC073501
S/G/Y/R/B/O NT_011233AC008395513773823RH4821619223.33    1 AC008395, AC073501
S/G/Y/R/B/O NT_011233AC008395514281743D19S228    19287.501 AC008395, AC073501
S/G/Y/R/B/O NT_011233AC008395514281743RH1076  191647.00  1 AC008395, AC073501
S/G/Y/R/B/O NT_011233AC008395514282123RH1341519221.60    1 AC008395, AC073501
S/G/Y/R/B/O NT_011233AC098790514603443          
S/G/Y/R/B/O NT_011233AC011465515492423RH3916419221.70    1 AC011465, AC073501
S/G/Y/R/B/O NT_011233AC011479516410173RH6677119225.03    1 AC011479, AY050668
S/G/Y/R/B/O NT_011233AC011479516978983RH31450  191620.00  1 AC011479, AY050668
S/G/Y/R/B/O NT_011233AC011479517212883RH5598919225.03  19296.001 AC011479, AY050668
S/G/Y/R/B/O NT_011233AC011479517215493RH2631519223.70    1 AC011479, AY050668
S/G/Y/R/B/O NT_011233AC011479517281143RH6674319236.29    1 AC011479, AY050668
S/G/Y/R/B/O NT_011233AC011479517346483RH9408919223.60    1 AC011479, AY050668
S/G/Y/R/B/O NT_011233AC026806517486563          
S/G/Y/R/B/O NT_011233AC005625517718333          
S/G/Y/R/B/O NT_011233AC005789518000043RH9223219225.03    1 AC005789
S/G/Y/R/B/O NT_011233AC005789518097433RH1371519226.94    1 AC005789
S/G/Y/R/B/O NT_011233AC005789518099033RH1001  191625.00  1 AC005789
S/G/Y/R/B/O NT_011233AC005789518126033RH5602119226.94  19295.002 AC005789
S/G/Y/R/B/O NT_011233AC005789518128513RH1179319226.94    1 AC005789
S/G/Y/R/B/O NT_011233AC005789518304113RH5577019226.94  19295.001 AC005789
S/G/Y/R/B/O NT_011233AC005789518381493RH6587319225.03    1 AC005789
S/G/Y/R/B/O NT_011233AC005789518382163RH33815  191615.00  1 AC005789
S/G/Y/R/B/O NT_011233AC093076518412363          
S/G/Y/R/B/O NT_011233AC011469518738243RH74638  191610.00  1 AC011469
S/G/Y/R/B/O NT_011233AC011469518866623RH6919719225.03    1  
S/G/Y/R/B/O NT_011233AC067969519536123          
S/G/Y/R/B/O NT_011233AC005933520169383RH7124919236.90    1AC008649, AC091486, AC005933, AC008649, AC091486
S/G/Y/R/B/O NT_011233AC008649520623583RH4546219225.03    1AC091486, AC008649, AC091486
S/G/Y/R/B/O NT_011233AC008649520623713RH2670419229.69    1AC091486, AC008649, AC091486
S/G/Y/R/B/O NT_011233AC008649520964753RH3590019224.32    1AC022144, AC091486, AC008649, AC022144, AC091486
S/G/Y/R/B/O NT_011233AC008649521108423RH5581319223.70  19287.601AC022144, AC008649, AC022144
S/G/Y/R/B/O NT_011233AC008649521148123RH2663019223.60    1AC022144, AC091486, AC008649, AC022144, AC091486


  NT_011233 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011233AC022144521596412RH1601219223.50    1 AC022144
S/G/Y/R/B/O NT_011233AC022144521597442RH14268  191720.00  1 AC022144
S/G/Y/R/B/O NT_011233AC091486521795991          
S/G/Y/R/B/O NT_011233AC104534522623803RH8746  191726.00  1AC008982, AC008982, AC104534
S/G/Y/R/B/O NT_011233AC008982522891463RH6661619224.93    1 AC008982
S/G/Y/R/B/O NT_011233AC008982522896923RH5592519223.50    1 AC008982
S/G/Y/R/B/O NT_011233AC008982522896923WI-13808    19285.501 AC008982
S/G/Y/R/B/O NT_011233AC011455523044363RH31451  191726.00  1 AC011455
S/G/Y/R/B/O NT_011233AC011455523255293RH2648719231.24    1 AC011455
S/G/Y/R/B/O NT_011233AC011455523544093RH9370719223.60    1 AC011455
S/G/Y/R/B/O NT_011233AC011455523622383RH3916719223.60    1 AC011455
S/G/Y/R/B/O NT_011233AC011455523622523RH1226619223.60    1 AC011455
S/G/Y/R/B/O NT_011233AC011455523797903RH1585519232.59    1 AC011455, AF058761
S/G/Y/R/B/O NT_011233AC093036524426693          
S/G/Y/R/B/O NT_011233AC010605524441163          
S/G/Y/R/B/O NT_011233AC011443526261323RH1271619233.24    1 AC011443
S/G/Y/R/B/O NT_011233AC011443526486053RH3910719232.51    1 AC011443
S/G/Y/R/B/O NT_011233 - RH6678219224.93    0  
S/G/Y/R/B/O NT_011233 - SGC38365    19298.900 AC016590
S/G/Y/R/B/O NT_011233 - WI-11629    19300.401AC008848, AC008848