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  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_030867 NT_011227 NT_030171 NT_011277 NT_011269 NT_011268 NT_011258
NT_030869 NT_011271 NT_011255 NT_011274 NT_011316 NT_011145 NT_031917 NT_029485
NT_025133 NT_011176 NT_031915 NT_011151 NT_025155 NT_011290 NT_025130 NT_011281
NT_011141 NT_030861 NT_011288 NT_011295 NT_033318 NT_027203 NT_031920 NT_026483
NT_033317 NT_033315 NT_025183 NT_025175 NT_025197 NT_030182 NT_025922 NT_030862
NT_011196 NT_011294 NT_011296 NT_011192 NT_011233 NT_011250 NT_011139 NT_011266
NT_011109 NT_033313 NT_033316 NT_011091 NT_011148 NT_025184 NT_011225 NT_011150
NT_011104


  NT_011196
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011196AC008507431645173SGC30870    19216.101 AC008507, AC011883, AC023081
S/G/Y/R/B/O NT_011196AC008507431966473WI-21970    19224.001 AC008507, AC011883, AC023081
S/G/Y/R/B/O NT_011196AC008507431976333RH14440  191184.0019214.801 AC008507, AC011883, AC023081
S/G/Y/R/B/O NT_011196AC008507431976333RH5599519158.80    1 AC008507, AC011883, AC023081
S/G/Y/R/B/O NT_011196AC008507431983313RH1289419157.32    1 AC008507, AC011883, AC023081
S/G/Y/R/B/O NT_011196AC008507431984113RH2869919181.52    1 AC008507, AC011883, AC023081
S/G/Y/R/B/O NT_011196AC008507431994073RH3914319180.67    1 AC008507, AC011883, AC023081
S/G/Y/R/B/O NT_011196AC008507432008293RH6540419181.52    1 AC008507, AC023081
S/G/Y/R/B/O NT_011196AC008507432371773CHLC.GATA44D10    19217.701 AC008507
S/G/Y/R/B/O NT_011196AC098780432649933          
S/G/Y/R/B/O NT_011196AC006541432693583          
S/G/Y/R/B/O NT_011196AC006131433044823          
S/G/Y/R/B/O NT_011196AC005760433381203          
S/G/Y/R/B/O NT_011196AC005597433743003          
S/G/Y/R/B/O NT_011196AC005596434176263RH31802  191166.00  1 AC005596
S/G/Y/R/B/O NT_011196AC093035434440213          
S/G/Y/R/B/O NT_011196AC006506434504623          
S/G/Y/R/B/O NT_011196AC011454436451053AFM324ZG9    19224.701AC011504, AC011454, AC011504
S/G/Y/R/B/O NT_011196AC011504437407063RH5572919185.74  19225.301 AC011504
S/G/Y/R/B/O NT_011196AC093065437667853          
S/G/Y/R/B/O NT_011196AC011478438427813RH31447  191210.00  1 AC011478
S/G/Y/R/B/O NT_011196AC093034438669263          
S/G/Y/R/B/O NT_011196AC011532438951503RH5570119185.94  19226.601AC007758, AC007758, AC011532
S/G/Y/R/B/O NT_011196AC011532438954843RH5596419185.74  19226.701AC007758, AC007758, AC011532
S/G/Y/R/B/O NT_011196AC011532438961723RH7866119188.38    1AC007758, AC007758, AC011532
S/G/Y/R/B/O NT_011196AC007758439068603          
S/G/Y/R/B/O NT_011196AC011507439318373          
S/G/Y/R/B/O NT_011196AC020897440540583          
S/G/Y/R/B/O NT_011196AC020912441713603          
S/G/Y/R/B/O NT_011196AC020952443224343          
S/G/Y/R/B/O NT_011196AC025809444579953RH4636519185.84    1 AC025809
S/G/Y/R/B/O NT_011196AC025809444584093RH6508519185.84    1 AC025809
S/G/Y/R/B/O NT_011196AC025809444591203RH9901419185.84    1 AC025809
S/G/Y/R/B/O NT_011196AC025809445194283RH5589219185.84  19226.701 AC025809
S/G/Y/R/B/O NT_011196AC007796445917943RH2552619185.84    1 AC007796
S/G/Y/R/B/O NT_011196AC007796445938223RH1561319185.84    1 AC007796
S/G/Y/R/B/O NT_011196AC007796445938973RH3666119185.84    1 AC007796
S/G/Y/R/B/O NT_011196AC008992446067603RH4956019185.84    1 AC008992
S/G/Y/R/B/O NT_011196AC008992446067603RH1087  191246.00  1 AC008992
S/G/Y/R/B/O NT_011196AC008794446422613          
S/G/Y/R/B/O NT_011196AC011525447594583          
S/G/Y/R/B/O NT_011196AC011535448021973          
S/G/Y/R/B/O NT_011196AC011546448355223          
S/G/Y/R/B/O NT_011196AC011528448653043          
S/G/Y/R/B/O NT_011196AC011459448971213          
S/G/Y/R/B/O NT_011196AC011463449944873CHLC.GATA10A05.799    19250.001 AC011463, AC011590
S/G/Y/R/B/O NT_011196AC011463450135833CHLC.GATA6D01.194    19233.601 AC011590
S/G/Y/R/B/O NT_011196AC098788450664623          
S/G/Y/R/B/O NT_011196AC011456450681563          
S/G/Y/R/B/O NT_011196AC005547452228133          


  NT_011196 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011196AC092475452342643          
S/G/Y/R/B/O NT_011196AC005265452358343          
S/G/Y/R/B/O NT_011196AC011518452781603          
S/G/Y/R/B/O NT_011196AC104529453139763RH6561319186.75    1 AC104529
S/G/Y/R/B/O NT_011196AC005266453246763          
S/G/Y/R/B/O NT_011196AC074139453606623          
S/G/Y/R/B/O NT_011196AC005934453839273          
S/G/Y/R/B/O NT_011196AC005340454132613          
S/G/Y/R/B/O NT_011196AC005953454344533          
S/G/Y/R/B/O NT_011196AC007773455183893RH1532619188.48    1 AC007773
S/G/Y/R/B/O NT_011196AC007773455185813RH755  191303.00  1 AC007773
S/G/Y/R/B/O NT_011196AC007773455659193RH4874819188.48    1 AC007773
S/G/Y/R/B/O NT_011196AC007773455694413RH5576619188.58  19226.901 AC007773
S/G/Y/R/B/O NT_011196AC007773455695013RH2603819188.38    1 AC007773
S/G/Y/R/B/O NT_011196AC005382456363963          
S/G/Y/R/B/O NT_011196AC005621456685363RH5584119183.30  19225.301 AC005621
S/G/Y/R/B/O NT_011196AC005621456686043RH6751319195.23    1 AC005621
S/G/Y/R/B/O NT_011196AC008474456970363          
S/G/Y/R/B/O NT_011196AC008736458963973RH3911319196.18    1AC027340, AC008736, AC027340
S/G/Y/R/B/O NT_011196AC008805459878093          
S/G/Y/R/B/O NT_011196AC027340460992111RH602145421.55  5316.703AC008850, AC008865, AC008907, AC008908, AC008850, AC008865, AC008907, AC008908, AC027340
S/G/Y/R/B/O NT_011196AC011449461263323          
S/G/Y/R/B/O NT_011196AC093069462464313          
S/G/Y/R/B/O NT_011196AC008521462474453          
S/G/Y/R/B/O NT_011196AC008738464380233RH42803  191332.00  1 AC008738
S/G/Y/R/B/O NT_011196AC008738465143733RH6532419193.75    1 AC008738
S/G/Y/R/B/O NT_011196AC008738465296333RH2505619195.06    1  
S/G/Y/R/B/O NT_011196AC008738465297023RH3916219197.71    1 AC008738, U34070
S/G/Y/R/B/O NT_011196AC008738465298003RH6493319196.49    1 AC008738, U34070
S/G/Y/R/B/O NT_011196AC008738465299583RH5593119193.81  19258.801 AC008738, U34070
S/G/Y/R/B/O NT_011196AC008738465306703RH3921219193.75    1 AC008738, U34070
S/G/Y/R/B/O NT_011196AC008744466052343RH3916819193.92    1 AC008744
S/G/Y/R/B/O NT_011196AC008744466093353RH1801319194.23    1 AC008744
S/G/Y/R/B/O NT_011196AC008744466093573RH33587  191334.00  1 AC008744
S/G/Y/R/B/O NT_011196AC008744466094023RH7912719195.48    1 AC008744
S/G/Y/R/B/O NT_011196AC008744466109143RH2703519196.80    1 AC008744
S/G/Y/R/B/O NT_011196AC008744466120923RH9173419194.44    1 AC008744
S/G/Y/R/B/O NT_011196AC008744466121343RH1008119196.18    1 AC008744
S/G/Y/R/B/O NT_011196AC008744466166083RH14064  191330.00  1 AC008744
S/G/Y/R/B/O NT_011196AC008744466166153RH1176619193.92    1 AC008744
S/G/Y/R/B/O NT_011196AC008744466167883RH4723619193.92    1 AC008744
S/G/Y/R/B/O NT_011196AC008744466385483RH3919719194.23    1 AC008744
S/G/Y/R/B/O NT_011196AC010485468077553RH4956119199.23191361.00  1 AC010475, AC010485
S/G/Y/R/B/O NT_011196AC010510468397183          
S/G/Y/R/B/O NT_011196AC008994468811353          
S/G/Y/R/B/O NT_011196AC007205469228793          
S/G/Y/R/B/O NT_011196AC011519469484753          
S/G/Y/R/B/O NT_011196AC005615469880193          
S/G/Y/R/B/O NT_011196AC008556470427873RH7868619238.30    1AC067911, AC008556, AC008997, AC067911
S/G/Y/R/B/O NT_011196AC008556470435073RH5597019205.56    1AC067911, AC008556, AC008997, AC067911


  NT_011196 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011196AC008556470435073WI-13386    19285.001AC067911, AC008556, AC008997, AC067911
S/G/Y/R/B/O NT_011196AC008556470438153RH3678819236.79    1AC067911, AC008556, AC008997, AC067911
S/G/Y/R/B/O NT_011196AC008556470445223RH9382919203.96    1AC067911, AC008556, AC008997, AC067911
S/G/Y/R/B/O NT_011196AC008556470447173SGC32254    19285.001AC067911, AC008556, AC008997, AC067911
S/G/Y/R/B/O NT_011196AC008556470451893RH3589219203.96    1AC067911, AC008556, AC008997, AC067911
S/G/Y/R/B/O NT_011196AC008556470564793RH4780019203.96    1AC067911, AC008556, AC008997, AC067911
S/G/Y/R/B/O NT_011196AC005792472208023WI-10297    19284.501 AC005792
S/G/Y/R/B/O NT_011196AC016587472808283AFMB360ZF5    19284.501 AL354656
S/G/Y/R/B/O NT_011196AC010614473988433RH4567819206.84    1 AC010614, AL354656
S/G/Y/R/B/O NT_011196AC010614474199653RH9364719205.83    1 AC010614, AL354656
S/G/Y/R/B/O NT_011196AC010614474264773RH6854519207.15    1 AC010614
S/G/Y/R/B/O NT_011196AC010614474273663RH5602019206.04  19260.701 AC010614, AL354656
S/G/Y/R/B/O NT_011196AC010614474573733RH704206503.79    1AC018791, AC010614, AC018791, AL354656
S/G/Y/R/B/O NT_011196AC010614474586873RH7885  191404.00  1AC018791, AC010614, AC018791, AL354656
S/G/Y/R/B/O NT_011196AC010614474587643RH4432319213.94    1AC018791, AC010614, AC018791, AL354656
S/G/Y/R/B/O NT_011196AC092080475306063          
S/G/Y/R/B/O NT_011196AC016627475711333RH3906919208.51    1AC018791, AC016627, AC018791, AC034210
S/G/Y/R/B/O NT_011196AC010504475804623          
S/G/Y/R/B/O NT_011196AC018791476184781          
S/G/Y/R/B/O NT_011196AC067911476218161          
S/G/Y/R/B/O NT_011196 - RH4196319187.16    0AC087314, AC091805, AC058333, AC087314, AC091805
S/G/Y/R/B/O NT_011196 - RH13807  191399.00  0  
S/G/Y/R/B/O NT_011196 - SGC33351    19257.201AC011474, AC011474
S/G/Y/R/B/O NT_011196 - RH4537919203.96    0  
S/G/Y/R/B/O NT_011196 - RH1897  191394.00  0  
S/G/Y/R/B/O NT_011196 - D19S224    19267.001AC002116, AD000813, AC002116, AD000813
S/G/Y/R/B/O NT_011196 - RH7556519206.21    1AC012617, AC092296, AC093238, AC012617, AC092296, AC093238
S/G/Y/R/B/O NT_011196 - RH9821519204.98    0AC008556, AC067911, AC008556, AC008997, AC067911