Chromosome 19 - RH Maps - Single Contig

Chromosome 19 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_025920	NT_030867	NT_011227	NT_030171	NT_011277	NT_011269	NT_011268	NT_011258
NT_030869	NT_011271	NT_011255	NT_011274	NT_011316	NT_011145	NT_031917	NT_029485
NT_025133	NT_011176	NT_031915	NT_011151	NT_025155	NT_011290	NT_025130	NT_011281
NT_011141	NT_030861	NT_011288	NT_011295	NT_033318	NT_027203	NT_031920	NT_026483
NT_033317	NT_033315	NT_025183	NT_025175	NT_025197	NT_030182	NT_025922	NT_030862
NT_011196	NT_011294	NT_011296	NT_011192	NT_011233	NT_011250	NT_011139	NT_011266
NT_011109	NT_033313	NT_033316	NT_011091	NT_011148	NT_025184	NT_011225	NT_011150
NT_011104

NT_011290

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_011290	AC004659	15821485	3	RH31824			19	475.00			1		AC004659
S/G/Y/R/B/O	NT_011290	AC004659	15868147	3	RH55967	19	79.95					1		AC004659
S/G/Y/R/B/O	NT_011290	AC004659	15868147	3	WI-16161					19	54.60	1		AC004659
S/G/Y/R/B/O	NT_011290	AC004659	15912658	3	RH55895	19	78.41	19	475.00	19	70.20	1		AC004659
S/G/Y/R/B/O	NT_011290	AC004659	15912766	3	RH18228	19	77.15					1		AC004659
S/G/Y/R/B/O	NT_011290	AC104528	15940108	3
S/G/Y/R/B/O	NT_011290	AC004699	15946159	3
S/G/Y/R/B/O	NT_011290	AC004794	16021467	3	RH55762	19	78.41			19	70.20	1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC004794	16021526	3	RH55963	19	78.41			19	70.20	1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC004794	16021559	3	RH12226	19	77.15					1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC004794	16021842	3	WI-6344					19	77.00	1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC004794	16021842	3	RH55666	19	76.62					1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC004794	16021868	3	RH12349	19	78.27					1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC004794	16021895	3	RH26770	19	77.04					1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC004794	16021904	3	RH9901	19	87.36					1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC004794	16027481	3	RH48649	19	78.27					1	AC003956,	AC003956, AC004794
S/G/Y/R/B/O	NT_011290	AC003956	16027742	3
S/G/Y/R/B/O	NT_011290	AC004663	16066487	3	RH55958	19	86.05			19	67.40	1		AC004663
S/G/Y/R/B/O	NT_011290	AC004257	16104849	3
S/G/Y/R/B/O	NT_011290	AC004798	16144304	3	RH10571	19	78.41					1		AC004798
S/G/Y/R/B/O	NT_011290	AC004798	16153963	3	RH17340	19	78.41					1		AC004798
S/G/Y/R/B/O	NT_011290	AC004798	16154075	3	RH91446	19	86.05					1
S/G/Y/R/B/O	NT_011290	AC004798	16160567	3	RH69303	19	85.74					1		AC004798
S/G/Y/R/B/O	NT_011290	AC003111	16210566	3	RH1277			19	494.00			1		AC003111
S/G/Y/R/B/O	NT_011290	AC003111	16210652	3	RH28445	19	78.41					1		AC003111
S/G/Y/R/B/O	NT_011290	AC005776	16236002	3	RH11644	19	78.41					1		AC005776
S/G/Y/R/B/O	NT_011290	AC093060	16260377	3	RH55929	19	86.05			19	67.40	1	AC005785,	AC005785, AC093060
S/G/Y/R/B/O	NT_011290	AC005785	16261600	3	RH48708	19	78.31					1		AC005785
S/G/Y/R/B/O	NT_011290	AC005785	16287367	3	RH103467	19	78.41					1		AC005785
S/G/Y/R/B/O	NT_011290	AC006128	16306144	3	RH103675	19	86.05					1		AC006128
S/G/Y/R/B/O	NT_011290	AC006128	16328421	3	RH55741	19	78.27			19	72.50	1	AC007059,	AC006128, AC007059
S/G/Y/R/B/O	NT_011290	AC006128	16328972	3	RH55930	19	78.20			19	81.60	1	AC007059,	AC006128, AC007059
S/G/Y/R/B/O	NT_011290	AC007059	16337530	3
S/G/Y/R/B/O	NT_011290		-		RH11583	19	80.35					0
S/G/Y/R/B/O	NT_011290		-		CHLC.GATA27C12					19	70.20	1	AC068845, AD000685,	AC068845, AD000685
S/G/Y/R/B/O	NT_011290		-		RH28660	19	78.10					1	AC008764,	AC008764
S/G/Y/R/B/O	NT_011290		-		RH36767	19	77.10					1	AC010646,	AC010646
S/G/Y/R/B/O	NT_011290		-		RH39211	19	86.05					1	AC008569,	AC008569
S/G/Y/R/B/O	NT_011290		-		RH55747	19	86.36					1	AC010463,	AC010463
S/G/Y/R/B/O	NT_011290		-		RH55829	19	82.38					1	AC009004,	AC009004
S/G/Y/R/B/O	NT_011290		-		RH78594	19	78.31					0
S/G/Y/R/B/O	NT_011290		-		RH78642	19	77.15					0
S/G/Y/R/B/O	NT_011290		-		RH80557	19	78.31					0