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  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_030867 NT_011227 NT_030171 NT_011277 NT_011269 NT_011268 NT_011258
NT_030869 NT_011271 NT_011255 NT_011274 NT_011316 NT_011145 NT_031917 NT_029485
NT_025133 NT_011176 NT_031915 NT_011151 NT_025155 NT_011290 NT_025130 NT_011281
NT_011141 NT_030861 NT_011288 NT_011295 NT_033318 NT_027203 NT_031920 NT_026483
NT_033317 NT_033315 NT_025183 NT_025175 NT_025197 NT_030182 NT_025922 NT_030862
NT_011196 NT_011294 NT_011296 NT_011192 NT_011233 NT_011250 NT_011139 NT_011266
NT_011109 NT_033313 NT_033316 NT_011091 NT_011148 NT_025184 NT_011225 NT_011150
NT_011104


  NT_011294
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011294AC092073476780571          
S/G/Y/R/B/O NT_011294AC008747477051283RH10302719213.99    1 AC008747
S/G/Y/R/B/O NT_011294AC008747477532103RH2499819206.63    2AL589674, AC008747, AL589674
S/G/Y/R/B/O NT_011294AC008747477845213RH7526719213.99    1AC092073, AC008747, AC092073
S/G/Y/R/B/O NT_011294AC022143478720813WI-4604    19279.501 AC022143
S/G/Y/R/B/O NT_011294AC022143479053573RH5596919208.10  19273.701AC020910, AC020910, AC022143
S/G/Y/R/B/O NT_011294AC020910479697223RH1584719211.24    1 AC020910
S/G/Y/R/B/O NT_011294AC020910479698053RH5601119209.21    2 AC020910, AC020910
S/G/Y/R/B/O NT_011294AC020910479698053IB366    19283.902 AC020910, AC020910
S/G/Y/R/B/O NT_011294AC020910480026683CHLC.GATA24C09    19279.401 AC020910
S/G/Y/R/B/O NT_011294AC020910480171593RH10247519213.94    1 AC020910
S/G/Y/R/B/O NT_011294AC020910480262623RH5580419211.34  19279.001 AC020910
S/G/Y/R/B/O NT_011294AC020910480262863RH5601119209.21    2 AC020910, AC020910
S/G/Y/R/B/O NT_011294AC020910480262863IB366    19283.902 AC020910, AC020910
S/G/Y/R/B/O NT_011294AC020910480277283RH6929219211.44    1 AC020910
S/G/Y/R/B/O NT_011294AC020910480508483RH10296819208.62    1 AC020910
S/G/Y/R/B/O NT_011294AC008555480946863RH10411419213.99    1 AC008555
S/G/Y/R/B/O NT_011294AC008555480951143RH5601619208.93  19279.201 AC008555
S/G/Y/R/B/O NT_011294AC008555480951323RH5585819211.34  19279.201 AC008555
S/G/Y/R/B/O NT_011294AC008555480951413RH3916019211.54    1 AC008555
S/G/Y/R/B/O NT_011294AC008555481253323RH6849319211.44    1AC026520, AC008555, AC026520
S/G/Y/R/B/O NT_011294AC008555481328073RH3912419211.44    1AC026520, AC008555, AC026520
S/G/Y/R/B/O NT_011294AC008555482268443RH4873819208.51    1AC026520, AC008555, AC026520
S/G/Y/R/B/O NT_011294AC008555482270943RH2590319237.01    1AC026520, AC008555, AC026520
S/G/Y/R/B/O NT_011294AC008555482284763RH3905419213.99    1AC026520, AC008555, AC026520
S/G/Y/R/B/O NT_011294AC008555482285333RH9171619213.99    1AC026520, AC008555, AC026520
S/G/Y/R/B/O NT_011294AC008555482309413RH5589119208.31  19273.801AC026520, AC008555, AC026520
S/G/Y/R/B/O NT_011294AC008555482399673RH5573719213.99  19279.201AC026520, AC008555, AC026520
S/G/Y/R/B/O NT_011294AC020907482865881RH4266819211.54191480.0019279.301 AC020907
S/G/Y/R/B/O NT_011294AC020907482867151RH216  191480.00  1 AC020907
S/G/Y/R/B/O NT_011294AC020907483099121RH2552719213.99    1 AC020907
S/G/Y/R/B/O NT_011294AC020907483352401RH1742319216.14    1AC024682, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC020907483412701RH1592119216.04    1AC024682, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC020907483418521RH1679719214.04    1AC024682, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC020907483847711RH7947  191492.00  1AC024682, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC020907483943521RH6519919216.04    1AC024682, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC020907483944641RH3919619216.14    1AC024682, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC020907484035061RH32722  191492.0019273.201 AC020907
S/G/Y/R/B/O NT_011294AC020907484112801RH7585319218.47    1 AC020907
S/G/Y/R/B/O NT_011294AC020907484137651RH3913919213.99    1  
S/G/Y/R/B/O NT_011294AC020907484145501RH6714719208.80    1 AC020907
S/G/Y/R/B/O NT_011294AC020907484340531RH4956219216.04    1AC024682, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC020907484340531RH34986  191492.00  1AC024682, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC026520483147871          
S/G/Y/R/B/O NT_011294AC024682484261331RH7505819216.04    1AC020907, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC024682484262001RH9161519216.04    1AC020907, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC024682484309861RH5571019216.04  19279.101AC020907, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC024682484310481RH1160019208.10    1AC020907, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC002390484645513RH5589919216.04  19279.101AC020907, AC024682, AC002390, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC002390484646533TIGR-A004Z42    19280.901AC020907, AC024682, AC002390, AC020907, AC024682


  NT_011294 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011294AC002390484646533RH5572219216.14    1AC020907, AC024682, AC002390, AC020907, AC024682
S/G/Y/R/B/O NT_011294AC002128485199253RH10228319216.04    1AC024682, AC002128, AC024682
S/G/Y/R/B/O NT_011294AD000684485628423RH6813419213.84    1 AD000684, Y07661
S/G/Y/R/B/O NT_011294AD000684485742243RH7600519216.04    2  
S/G/Y/R/B/O NT_011294AD000684485742243RH7626419236.90    2  
S/G/Y/R/B/O NT_011294AD000684485744383RH3909219216.04    2AC090439, AC090439, AD000684, Y07661
S/G/Y/R/B/O NT_011294AC002132486084063RH5571719216.04  19279.101 AC002132
S/G/Y/R/B/O NT_011294U62631486421363RH1811819216.14    1 U62631
S/G/Y/R/B/O NT_011294 - RH10445619216.04    0  
S/G/Y/R/B/O NT_011294 - RH1271219216.04    0  
S/G/Y/R/B/O NT_011294 - RH1808719214.24    0AC002115, AC002115
S/G/Y/R/B/O NT_011294 - RH3595419213.99    0AC020907, AC020907
S/G/Y/R/B/O NT_011294 - RH3907719213.99    0  
S/G/Y/R/B/O NT_011294 - RH3914219216.04    0  
S/G/Y/R/B/O NT_011294 - RH4432319213.94    1AC010614, AC018791, AC010614, AC018791, AL354656
S/G/Y/R/B/O NT_011294 - RH4614919216.04    0  
S/G/Y/R/B/O NT_011294 - RH4746519213.99    0  
S/G/Y/R/B/O NT_011294 - RH5586219206.74  19272.400AC002115, AC002115
S/G/Y/R/B/O NT_011294 - RH6486319216.04    0AC007283, AC009927, AC012617, AC020782, AC022148, AC022527, AC079140, AC091924, AC092296, AC093238, AC108475, AB038967, AC007283, AC009927, AC012617, AC020782, AC022148, AC022527, AC079140, AC091924, AC092296, AC093238, AC108475
S/G/Y/R/B/O NT_011294 - SGC30131    19281.200AD000864, AD000864
S/G/Y/R/B/O NT_011294 - RH7966419216.04    0  
S/G/Y/R/B/O NT_011294 - RH9119019216.04    0  
S/G/Y/R/B/O NT_011294 - RH9150219213.99    0AC008747, AC092073, AC008747, AC092073
S/G/Y/R/B/O NT_011294 - RH9334819216.04    0  
S/G/Y/R/B/O NT_011294 - RH9893819215.84    0