Chromosome 19 - RH Maps - Single Contig

Chromosome 19 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_025920	NT_030867	NT_011227	NT_030171	NT_011277	NT_011269	NT_011268	NT_011258
NT_030869	NT_011271	NT_011255	NT_011274	NT_011316	NT_011145	NT_031917	NT_029485
NT_025133	NT_011176	NT_031915	NT_011151	NT_025155	NT_011290	NT_025130	NT_011281
NT_011141	NT_030861	NT_011288	NT_011295	NT_033318	NT_027203	NT_031920	NT_026483
NT_033317	NT_033315	NT_025183	NT_025175	NT_025197	NT_030182	NT_025922	NT_030862
NT_011196	NT_011294	NT_011296	NT_011192	NT_011233	NT_011250	NT_011139	NT_011266
NT_011109	NT_033313	NT_033316	NT_011091	NT_011148	NT_025184	NT_011225	NT_011150
NT_011104

NT_030861

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_030861	AC010463	18376495	3	RH55735	19	97.28					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18376495	3	WI-11438					19	87.20	1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18387616	3	RH24994	19	95.98					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18387640	3	SGC31836					19	89.10	1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18387640	3	RH55747	19	86.36					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18387672	3	RH11746	19	94.97					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18415071	3	RH10817	19	89.49					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18428205	3	RH70087	14	96.06					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18428527	3	RH55876	19	89.59					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18428527	3	WI-18581					19	66.00	1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18431476	3	RH93609	19	96.01					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18431633	3	RH76595	19	99.31					1		AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18450926	3	RH32317			19	541.00			1		AF361481
S/G/Y/R/B/O	NT_030861	AC010463	18451153	3	RH55799	19	95.98	19	526.00	19	89.00	1		AC010463, AF361481
S/G/Y/R/B/O	NT_030861	AC010463	18460051	3	RH39040	19	95.98					1	AC010319,	AC010319, AC010463
S/G/Y/R/B/O	NT_030861	AC010463	18474714	3	RH66747	19	94.25					1	AC010319,	AC010319, AC010463
S/G/Y/R/B/O	NT_030861	AC010319	18500034	3	RH39146	19	95.98					1		AC010319
S/G/Y/R/B/O	NT_030861	AC010319	18511510	3	RH75199	19	97.28					1		AC010319
S/G/Y/R/B/O	NT_030861	AC010319	18511512	3	RH78341	19	97.25					1		AC010319
S/G/Y/R/B/O	NT_030861	AC010319	18511652	3	RH37709			19	509.00			1		AC010319
S/G/Y/R/B/O	NT_030861	AC010319	18511707	3	RH80754	19	99.81					1		AC010319
S/G/Y/R/B/O	NT_030861	AC010319	18515562	3	RH102614	19	95.98					1		AC010319
S/G/Y/R/B/O	NT_030861	AC010319	18533681	3	RH46896	19	99.38					1		AC010319
S/G/Y/R/B/O	NT_030861	AC010319	18533683	3	RH76342	19	89.36					1		AC010319
S/G/Y/R/B/O	NT_030861	AC010618	18677100	3	RH9859	19	96.92					1		AC010618
S/G/Y/R/B/O	NT_030861	AC010618	18690262	3	RH55724	19	99.92			19	89.00	1		AC010618
S/G/Y/R/B/O	NT_030861	AC010618	18691464	3	RH75526	19	98.54					1		AC010618
S/G/Y/R/B/O	NT_030861		-		RH103144	19	96.42					0
S/G/Y/R/B/O	NT_030861		-		RH103214	19	98.44					0
S/G/Y/R/B/O	NT_030861		-		RH103228	19	98.00					0
S/G/Y/R/B/O	NT_030861		-		RH71411	19	95.98					0
S/G/Y/R/B/O	NT_030861		-		RH75511	19	99.26					1	AC010646,	AC010646