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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009743
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009743AC0930241013165411          
S/G/Y/R/B/O NT_009743AC0222901013170291          
S/G/Y/R/B/O NT_009743AC0639481021534451RH14002  124208.0012498.401AC021053, AC093024, AC021053, AC026549, AC063948, AC093024
S/G/Y/R/B/O NT_009743AC0639481021534451RH5243712402.58    1AC021053, AC093024, AC021053, AC026549, AC063948, AC093024
S/G/Y/R/B/O NT_009743AC0639481021540751RH9349312402.28    1AC021053, AC022290, AC093024, AC021053, AC022290, AC026549, AC063948, AC093024
S/G/Y/R/B/O NT_009743AC0639481021541391RH3983212399.67    1AC022290, AC093024, AC022290, AC026549, AC063948, AC093024
S/G/Y/R/B/O NT_009743AC0639481021555221RH9847512399.89    1AC022290, AC022290, AC026549, AC063948
S/G/Y/R/B/O NT_009743AC0639481021625541RH6735312399.61    1AC021053, AC022290, AC093024, AC021053, AC022290, AC026549, AC063948, AC093024
S/G/Y/R/B/O NT_009743AC0639481021657801RH6591912400.57    1AC021053, AC022290, AC093024, AC021053, AC022290, AC026549, AC063948, AC093024
S/G/Y/R/B/O NT_009743AC0266151014083561          
S/G/Y/R/B/O NT_009743AC0906711014188351          
S/G/Y/R/B/O NT_009743AC0738331015074401RH4645512400.57    1 AC073833
S/G/Y/R/B/O NT_009743AC0102051016084683RH5267012400.57  12498.501AC073833, AC073833
S/G/Y/R/B/O NT_009743AC0102051016084763RH2563512400.21    1AC073833, AC010205, AC073833
S/G/Y/R/B/O NT_009743AC0102051016088803RH9185412401.81    1AC073833, AC010205, AC073833
S/G/Y/R/B/O NT_009743AC0102051016417913WI-20671    12498.301AC005409, AC073833, AC005409, AC010205, AC073833
S/G/Y/R/B/O NT_009743AC0102051016417913RH5258412403.09    1AC005409, AC073833, AC005409, AC010205, AC073833
S/G/Y/R/B/O NT_009743AC0102051016501893RH10290912400.21    1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051016524553RH5282512400.21  12496.401AC005409, AC063950, AC005409, AC063950
S/G/Y/R/B/O NT_009743AC0102051016526703RH4483112401.81    1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051016690253RH5274512400.42124198.0012496.501AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051016691123RH4423712399.17    1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051016691573RH1073812399.67    1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051016721433RH10379112399.23    1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051016832813RH9924212400.10    1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051016895603RH3981012399.67    1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051017262193RH1821  124175.00  1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0102051017262193RH8614  124168.00  1AC005409, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743AC0054091017884783RH31258  124165.00  1AC063950, AC005409, AC063950
S/G/Y/R/B/O NT_009743AC0639501018149833          
S/G/Y/R/B/O NT_009743AC0843981018460141RH4728012400.57    1 AC084398
S/G/Y/R/B/O NT_009743AC0799071019967393RH4409012401.81    1AC036229, AC036229, AC079907
S/G/Y/R/B/O NT_009743AC0362291020631481RH6593812401.30    1 AC036229
S/G/Y/R/B/O NT_009743AC0362291021008141RH9057  124171.00  1 AC036229
S/G/Y/R/B/O NT_009743AC0362291021014111RH10201412399.89    1 AC036229
S/G/Y/R/B/O NT_009743AC0878821020503721          
S/G/Y/R/B/O NT_009743AC0930231021243291          
S/G/Y/R/B/O NT_009743AC0210531022415761RH31257  124154.00  1AC063948, AC021053, AC063948
S/G/Y/R/B/O NT_009743AC0639511022562943          
S/G/Y/R/B/O NT_009743AC0230561024204831RH5284512399.39  12495.201AC027087, AC063951, AC023056, AC027087, AC058819, AC063951, AC079953
S/G/Y/R/B/O NT_009743AC0230561024206741RH5308412400.32  12496.301AC027087, AC063951, AC023056, AC027087, AC058819, AC063951, AC079953
S/G/Y/R/B/O NT_009743AC0639471025606783RH9912512399.56    1AC026867, AC026867, AC063947
S/G/Y/R/B/O NT_009743AC0268671026292961          
S/G/Y/R/B/O NT_009743AC0102001026943813D12S871    12492.201 AC010200, AL157942
S/G/Y/R/B/O NT_009743AC0102001026961323RH7906312398.52    1 AC010200, AL157942
S/G/Y/R/B/O NT_009743AC0102001027280953AFM326TF5    12492.201 AC010200
S/G/Y/R/B/O NT_009743AC0102001027384833RH726  124127.00  1 AC010200
S/G/Y/R/B/O NT_009743AC0102001027476903RH5279112397.91  12488.101 AC010200
S/G/Y/R/B/O NT_009743AC0102001027478033RH1565212396.38    1  
S/G/Y/R/B/O NT_009743AC0102091028089443RH4486012395.84    1 AC010209


  NT_009743 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009743AC0102091028101943RH4520712395.84    1 AC010209
S/G/Y/R/B/O NT_009743AC0102091028102013RH3985612396.38    1 AC010209
S/G/Y/R/B/O NT_009743AC0102091028122463RH7887212397.43    1 AC010209
S/G/Y/R/B/O NT_009743AC0102091028122563RH3974112396.71    1 AC010209
S/G/Y/R/B/O NT_009743AC0608291029132421          
S/G/Y/R/B/O NT_009743AC0686481031049043          
S/G/Y/R/B/O NT_009743AC0102021032352653RH5268112400.21  12498.501AC093023, AC010202, AC093023
S/G/Y/R/B/O NT_009743AC0102021032352883RH7780212400.21    1AC093023, AC010202, AC093023
S/G/Y/R/B/O NT_009743AC0102021032800413RH6731812399.50    1 AC010202
S/G/Y/R/B/O NT_009743AC0102021033120963RH1805812398.63    1 AC010202
S/G/Y/R/B/O NT_009743AC0210581034783183WI-10084    12496.401AC025577, AC021058, AC025577, AC026107
S/G/Y/R/B/O NT_009743AC0255771034849013          
S/G/Y/R/B/O NT_009743AC0799521035966481          
S/G/Y/R/B/O NT_009743AF4047771036747843RH13950  124748.00  2AC069227, AC079952, AC069227, AC073157, AC079952, AF404777
S/G/Y/R/B/O NT_009743AF4047771036753463RH6897912399.61    2AC069227, AC079952, AC069227, AC073157, AC079952, AF404777
S/G/Y/R/B/O NT_009743AF4047771036767833RH5286912400.10  12496.502AC069227, AC079952, AC069227, AC073157, AC079952, AF404777
S/G/Y/R/B/O NT_009743AF4047771037281203RH38015  124281.00  2AC069227, AC079952, AC069227, AC073157, AC079952, AF404777
S/G/Y/R/B/O NT_009743AC0270871038175331          
S/G/Y/R/B/O NT_009743 - RH2553312397.43    1AC007622, AC007622, AC010187
S/G/Y/R/B/O NT_009743 - RH14229  124112.00  1AC026110, AC010204, AC026110
S/G/Y/R/B/O NT_009743 - RH2693412398.74    1AC026110, AC010204, AC026110
S/G/Y/R/B/O NT_009743 - RH8303  124226.00  1AC008011, AC008011
S/G/Y/R/B/O NT_009743 - RH3972812399.56    0  
S/G/Y/R/B/O NT_009743 - RH3990812398.90    0  
S/G/Y/R/B/O NT_009743 - RH4419112397.43    1AC010203, AC010203
S/G/Y/R/B/O NT_009743 - RH4816112397.75    1AC026110, AC010204, AC026109, AC026110
S/G/Y/R/B/O NT_009743 - RH5252812397.91    1AC010182, AC011595, AC087864, AC010182, AC011595, AC087864
S/G/Y/R/B/O NT_009743 - RH5253312395.84  12492.101AC010203, AC010203
S/G/Y/R/B/O NT_009743 - RH5262612396.17  12492.201AC026110, AC010204, AC026110
S/G/Y/R/B/O NT_009743 - RH5266512397.43  12492.301AC010203, AC024708, AC010203, AC024708
S/G/Y/R/B/O NT_009743 - RH5291412397.75  12494.400AC010202, AC010202
S/G/Y/R/B/O NT_009743 - RH6571512400.97    0  
S/G/Y/R/B/O NT_009743 - RH7601612396.49    1AC010203, AC024708, AC010203, AC024708
S/G/Y/R/B/O NT_009743 - RH7782212401.30    0AC005409, AC010205, AC063950, AC005409, AC010205, AC063950
S/G/Y/R/B/O NT_009743 - RH7924312395.84    1AC010203, AC010203
S/G/Y/R/B/O NT_009743 - RH9273112398.52    1AC010203, AC024708, AC010203, AC024708