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  Chromosome 12 - RH Maps - Single Contig
 

Chromosome 12 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009781
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009781AC090630385423051          
S/G/Y/R/B/O NT_009781AC025880386000171CHLC.GATA84H04    12250.801AC090630, AC025880, AC090630
S/G/Y/R/B/O NT_009781AC025880386204081CHLC.GATA81G02    12267.401AC090630, AC025880, AC090630
S/G/Y/R/B/O NT_009781AC006197386477213          
S/G/Y/R/B/O NT_009781AC078871388020753          
S/G/Y/R/B/O NT_009781AC023513388700303RH6589412196.93    1 AC024943
S/G/Y/R/B/O NT_009781AC023513388715873WI-21513    12267.401 AC023513, AC024943
S/G/Y/R/B/O NT_009781AC023513388715873RH5300912214.20    1 AC023513, AC024943
S/G/Y/R/B/O NT_009781AC023513388717083RH4473912214.13    1 AC023513, AC024943
S/G/Y/R/B/O NT_009781AC023513388718063RH3982812214.13    1 AC023513, AC024943
S/G/Y/R/B/O NT_009781AC020629389468013WI-9473    12249.901 AC020629, AC024943
S/G/Y/R/B/O NT_009781AC020629389468013RH5295412215.90    1 AC020629, AC024943
S/G/Y/R/B/O NT_009781AC020629389469303RH1014912196.41    1 AC020629
S/G/Y/R/B/O NT_009781AC020629390516623AFMA065YH5    12267.401 AC020629
S/G/Y/R/B/O NT_009781AC020629390784933RH1037173695.19    2AC016961, AC016961, AC020629
S/G/Y/R/B/O NT_009781AC079684391025143RH3979212213.37    1 AC079684
S/G/Y/R/B/O NT_009781AC079601392310171RH8066612215.73    1AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392311921RH3989312213.37    1AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392367101RH4466112215.90    1AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392380561WI-15798    12267.401AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392380561RH5259412214.13    1AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392484981RH5289512197.09    1AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392484981WI-15796    12293.701AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392486831RH3980012213.47    1AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392489621RH5267112201.02  12267.301AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC079601392490091RH7822912213.47    1AC018906, AC018906, AC079601
S/G/Y/R/B/O NT_009781AC018906392680311RH4524612215.90    2AC079600, AC079601, AC018906, AC079600, AC079601
S/G/Y/R/B/O NT_009781AC079600393150591RH4524612215.90    2AC018906, AC079601, AC018906, AC079600, AC079601
S/G/Y/R/B/O NT_009781AC079600394058521RH7558012214.09    1 AC079600
S/G/Y/R/B/O NT_009781AC089982394847283          
S/G/Y/R/B/O NT_009781AC068036396190641          
S/G/Y/R/B/O NT_009781AC068802396375643          
S/G/Y/R/B/O NT_009781AC012038397669143          
S/G/Y/R/B/O NT_009781AC079319398400643          
S/G/Y/R/B/O NT_009781AC079603399922973          
S/G/Y/R/B/O NT_009781AC107018401216803          
S/G/Y/R/B/O NT_009781AC025516402250491          
S/G/Y/R/B/O NT_009781AC060802402276021          
S/G/Y/R/B/O NT_009781AC026637402287311          
S/G/Y/R/B/O NT_009781AC026831403312411          
S/G/Y/R/B/O NT_009781AC090525403331823          
S/G/Y/R/B/O NT_009781AC016143405058181          
S/G/Y/R/B/O NT_009781AC007667405097531          
S/G/Y/R/B/O NT_009781AC093012405768131          
S/G/Y/R/B/O NT_009781AC018698407639383          
S/G/Y/R/B/O NT_009781AC090531409143523WI-21835    12263.101AC018698, AC018698, AC021137, AC025655, AC087895, AC090531, AC092973
S/G/Y/R/B/O NT_009781AC090531409143523RH5289412215.46    1AC018698, AC018698, AC021137, AC025655, AC087895, AC090531, AC092973
S/G/Y/R/B/O NT_009781AC090531409144653RH4421012215.79    1AC018698, AC018698, AC021137, AC025655, AC087895, AC090531, AC092973
S/G/Y/R/B/O NT_009781AC073607411040283          
S/G/Y/R/B/O NT_009781AC021651412689123          


  NT_009781 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009781AC024900414170053WI-15428    12263.301 AC011836, AC024900
S/G/Y/R/B/O NT_009781AC024900414170053RH5280012217.00    1 AC011836, AC024900
S/G/Y/R/B/O NT_009781AC024900414173233RH8096112195.78    1 AC011836, AC024900
S/G/Y/R/B/O NT_009781AC024900414173763RH9388112216.45    1 AC011836, AC024900
S/G/Y/R/B/O NT_009781AC024900414187193RH5247912217.06  12310.801 AC011836, AC024900
S/G/Y/R/B/O NT_009781AC024900415006583WI-21903    12263.301 AC011836, AC024900
S/G/Y/R/B/O NT_009781AC024900415006583RH5247012217.00    1 AC011836, AC024900
S/G/Y/R/B/O NT_009781AC024900415052803AFMA106VD5    12261.101 AC011836, AC024900
S/G/Y/R/B/O NT_009781AC015540415165473RH4442712217.00    1 AC015540
S/G/Y/R/B/O NT_009781AC015540415166953RH3972412217.00    1 AC015540
S/G/Y/R/B/O NT_009781AC027442416514091          
S/G/Y/R/B/O NT_009781AC076972417899173RH9293712203.66    1 AC076972
S/G/Y/R/B/O NT_009781AC024934418188303          
S/G/Y/R/B/O NT_009781AC073653420117313          
S/G/Y/R/B/O NT_009781AC025030421135643RH5292212200.47121688.0012276.501 AC008380, AC008503, AC025030
S/G/Y/R/B/O NT_009781AC025253421970833RH3977912203.04    1 AC025253
S/G/Y/R/B/O NT_009781AC025253422054703RH1681712203.23    1 AC025253
S/G/Y/R/B/O NT_009781AC025253422455373RH4621912196.98    1 AC025253
S/G/Y/R/B/O NT_009781AC025253423062683RH5304212201.10  12282.401 AC019004, AC025253
S/G/Y/R/B/O NT_009781AC025253423062923RH7774812201.10    1 AC019004, AC025253
S/G/Y/R/B/O NT_009781AC025253423164253RH5297712200.80  12277.401 AC019004, AC025253
S/G/Y/R/B/O NT_009781AC018923423499933          
S/G/Y/R/B/O NT_009781AC090012425891103WI-5295    12273.701 AC018583, AC090012
S/G/Y/R/B/O NT_009781AC079825426408263          
S/G/Y/R/B/O NT_009781AC079033426759593          
S/G/Y/R/B/O NT_009781AC089986428240781          
S/G/Y/R/B/O NT_009781AC008127428700683RH3989212195.96    2AC025154, AC025361, AC027098, AC067739, AC089986, AP001501, AC008127, AC025154, AC025361, AC027098, AC067739, AC089986, AP001501
S/G/Y/R/B/O NT_009781AC009248429786913RH9240712203.66    1 AC009248
S/G/Y/R/B/O NT_009781AC009248430009383WI-4540    12279.201 AC009248
S/G/Y/R/B/O NT_009781AC009248430343443RH5294012203.13121674.0012281.401 AC009248
S/G/Y/R/B/O NT_009781AC009248431146573WI-3757    12286.101 AC009248
S/G/Y/R/B/O NT_009781AC009778431527473RH3981512205.80    1 AC009778
S/G/Y/R/B/O NT_009781AC063924432375663RH10271412203.66    1 AC063924
S/G/Y/R/B/O NT_009781AC079950432903923SGC44613    12277.001 AC079950
S/G/Y/R/B/O NT_009781AC079950432903923RH5304712211.47    1 AC079950
S/G/Y/R/B/O NT_009781AC008124435261253RH7543512203.55    1 AC008124
S/G/Y/R/B/O NT_009781AC008124435270633RH5296212199.49121734.0012269.801 AC008124
S/G/Y/R/B/O NT_009781AC008124435315573WI-16886    12276.801 AC008124
S/G/Y/R/B/O NT_009781AC008124435315573RH5267312210.05    1 AC008124
S/G/Y/R/B/O NT_009781AC008124435315823RH8073012197.73    1 AC008124
S/G/Y/R/B/O NT_009781AC009777435673003          
S/G/Y/R/B/O NT_009781AC009464436704363RH6939512205.80    1AC010172, AC009464, AC010172
S/G/Y/R/B/O NT_009781AC009464437088033RH5265512202.60  12279.301AC010172, AC009464, AC010172
S/G/Y/R/B/O NT_009781AC009464437089983RH5295712203.66  12279.201AC010172, AC009464, AC010172
S/G/Y/R/B/O NT_009781AC009464437116543RH5261912203.66  12279.201AC000015, AC010172, AC000015, AC009464, AC010172
S/G/Y/R/B/O NT_009781AC009464437116803RH6775312205.80    1AC000015, AC010172, AC000015, AC009464, AC010172
S/G/Y/R/B/O NT_009781AC000015437230043RH5306712202.49  12279.001AC010172, AC000015, AC010172
S/G/Y/R/B/O NT_009781AC000015437230703RH4454812197.73    1AC010172, AC000015, AC010172
S/G/Y/R/B/O NT_009781AC000015437258143RH4496712202.49    1AC010172, AC000015, AC010172
S/G/Y/R/B/O NT_009781AC000015437262893RH3973212205.71    1AC010172, AC000015, AC010172


  NT_009781 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009781AC000015437305883SGC32980    12273.601AC010172, AC084878, AC000015, AC010172, AC084878
S/G/Y/R/B/O NT_009781AC000015437305883RH5246212210.05    1AC010172, AC084878, AC000015, AC010172, AC084878
S/G/Y/R/B/O NT_009781AC000015437305893RH5296512203.13  12281.301AC010172, AC084878, AC000015, AC010172, AC084878
S/G/Y/R/B/O NT_009781AC000015437310003RH5306212203.04121727.0012279.101AC010172, AC084878, AC000015, AC010172, AC084878
S/G/Y/R/B/O NT_009781AC000015437520083RH6588512197.73    1AC010172, AC084878, AC000015, AC010172, AC084878
S/G/Y/R/B/O NT_009781AC000015437588673RH3978312205.41    1AC010172, AC084878, AC000015, AC010172, AC084878
S/G/Y/R/B/O NT_009781AC000015437645753RH9419712202.07    1AC084878, AC000015, AC084878
S/G/Y/R/B/O NT_009781AC084878437774243          
S/G/Y/R/B/O NT_009781AC016254438677673WI-3295    12281.701AC010172, AC010172, AC016254
S/G/Y/R/B/O NT_009781AC016254439693963RH31236  121742.00  1 AC016254
S/G/Y/R/B/O NT_009781AC016254439870433RH1705612204.99    1 AC016254
S/G/Y/R/B/O NT_009781AC016254439893603SGC31837    12277.001 AC016254
S/G/Y/R/B/O NT_009781AC016254439893663RH5297012202.38  12281.401 AC016254
S/G/Y/R/B/O NT_009781AC016254439893773RH7480012200.13    1 AC016254
S/G/Y/R/B/O NT_009781AC016254439917403RH1780112204.69    1 AC016254
S/G/Y/R/B/O NT_009781AC025031440728141RH5256212202.41  12281.601 AC021353, AC025031
S/G/Y/R/B/O NT_009781AC025031441620621RH5303512203.66  12275.401 AC021353, AC025031
S/G/Y/R/B/O NT_009781AC025031441620621RH1740512203.96    1 AC021353, AC025031
S/G/Y/R/B/O NT_009781AC025031441621101RH4416912204.37    1 AC021353, AC025031
S/G/Y/R/B/O NT_009781AC025031441623541RH6793212204.69    1 AC025031
S/G/Y/R/B/O NT_009781AC025031441644581RH5275212205.00  12275.301 AC025031
S/G/Y/R/B/O NT_009781AC010172442240931          
S/G/Y/R/B/O NT_009781 - RH2617912197.16    1AC024257, AC024257
S/G/Y/R/B/O NT_009781 - WI-15661    12267.500  
S/G/Y/R/B/O NT_009781 - RH4754312197.09    1AC004801, AC004801
S/G/Y/R/B/O NT_009781 - WI-13060    12267.601AC011603, AC025256, AC011603, AC025256, AC073610
S/G/Y/R/B/O NT_009781 - RH5268712201.66    1AC004241, AC004241
S/G/Y/R/B/O NT_009781 - SGC33305    12275.301AC008014, AC080136, AC008014, AC080136
S/G/Y/R/B/O NT_009781 - RH5298512202.82    1AC004466, AC004466
S/G/Y/R/B/O NT_009781 - D12S85    12276.701AC079906, AC079906
S/G/Y/R/B/O NT_009781 - RH5301212197.62    1 AB002168
S/G/Y/R/B/O NT_009781 - RH6614012197.09    1AC004801, AC004801
S/G/Y/R/B/O NT_009781 - RH6677712203.04    0  
S/G/Y/R/B/O NT_009781 - RH6848612198.29    1AC008014, AC080136, AC008014, AC080136
S/G/Y/R/B/O NT_009781 - RH7121512197.16    0  
S/G/Y/R/B/O NT_009781 - RH9225112201.33    0  
S/G/Y/R/B/O NT_009781 - RH9879312197.62    0