Chromosome 12 - RH Maps - Single Contig

Chromosome 12 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009759	NT_009738	NT_024413	NT_033253	NT_009731	NT_009702	NT_009714	NT_033252
NT_027128	NT_024397	NT_030810	NT_009700	NT_030814	NT_024382	NT_030804	NT_026404
NT_009666	NT_009471	NT_033254	NT_033256	NT_033255	NT_033247	NT_024380	NT_025869
NT_024352	NT_009486	NT_024370	NT_028332	NT_009781	NT_030809	NT_009784	NT_009785
NT_009526	NT_026397	NT_024417	NT_026409	NT_009782	NT_009609	NT_030118	NT_009563
NT_009458	NT_009485	NT_009509	NT_009410	NT_024362	NT_028337	NT_009441	NT_024372
NT_009432	NT_027130	NT_009711	NT_009506	NT_030813	NT_027129	NT_009616	NT_009561
NT_029419	NT_009540	NT_009528	NT_015310	NT_009456	NT_029428	NT_024375	NT_009593
NT_033251	NT_024460	NT_024381	NT_024354	NT_030815	NT_024373	NT_009551	NT_019546
NT_029418	NT_024420	NT_024356	NT_026408	NT_024480	NT_026396	NT_024454	NT_025864
NT_009538	NT_030122	NT_024363	NT_029420	NT_024400	NT_009729	NT_019555	NT_009447
NT_009513	NT_009690	NT_015316	NT_030816	NT_009575	NT_024394	NT_033258	NT_009681
NT_009743	NT_033257	NT_024383	NT_030807	NT_030124	NT_009660	NT_033245	NT_009770
NT_009601	NT_009654	NT_030806	NT_029421	NT_009436	NT_009775	NT_028327	NT_009487
NT_009438	NT_009464	NT_033248	NT_009755	NT_009534	NT_009482	NT_024376	NT_009523
NT_024369	NT_033246	NT_033250	NT_027131	NT_009455	NT_024477

NT_009654

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_009654	AC090670	116144693	1
S/G/Y/R/B/O	NT_009654	AC009979	116153586	1
S/G/Y/R/B/O	NT_009654	AC008125	116493369	3	D12S369					12	572.90	1	AC040911,	AC040911
S/G/Y/R/B/O	NT_009654	AC008125	116493369	3	RH31660			12	4900.00			1	AC040911,	AC040911
S/G/Y/R/B/O	NT_009654	AC009770	116524832	3
S/G/Y/R/B/O	NT_009654	AC078880	116619419	1	RH52726	12	447.42			12	568.50	1		AC002478, AC078880
S/G/Y/R/B/O	NT_009654	AC040911	116658203	1
S/G/Y/R/B/O	NT_009654	AC026122	116729172	3
S/G/Y/R/B/O	NT_009654	AC010179	116914006	3
S/G/Y/R/B/O	NT_009654	AC009803	116981562	3	RH15038	12	451.62			12	572.90	1		AC009803, AC023799
S/G/Y/R/B/O	NT_009654	AC009803	116981562	3	RH793			12	4955.00			1		AC009803, AC023799
S/G/Y/R/B/O	NT_009654	AC009803	116993807	3	RH31264			12	4945.00			1		AC009803, AC023799
S/G/Y/R/B/O	NT_009654	AC068640	117100050	3
S/G/Y/R/B/O	NT_009654	AC007912	117131377	3
S/G/Y/R/B/O	NT_009654	AC012157	117318741	3	RH44144	12	455.81					1	AC009321,	AC009321, AC012157
S/G/Y/R/B/O	NT_009654	AC012157	117318923	3	RH36779	12	457.48					1	AC009321,	AC009321, AC012157
S/G/Y/R/B/O	NT_009654	AC009321	117362404	1	RH52827	12	455.39			12	573.00	1		AC009321
S/G/Y/R/B/O	NT_009654	AC009321	117470361	1	RH67200	12	454.24					1	AC019249,	AC009321, AC019249
S/G/Y/R/B/O	NT_009654	AC009321	117494805	1	WI-16346					12	569.20	1	AC019249,	AC009321, AC019249
S/G/Y/R/B/O	NT_009654	AC009321	117494805	1	RH52783	12	443.85					1	AC019249,	AC009321, AC019249
S/G/Y/R/B/O	NT_009654	AC009321	117494809	1	RH67707	12	447.95					1	AC019249,	AC009321, AC019249
S/G/Y/R/B/O	NT_009654	AC019249	117433974	1	RH80999	12	443.48					1		AC019249
S/G/Y/R/B/O	NT_009654	AC026334	117507391	3
S/G/Y/R/B/O	NT_009654	AC060226	117591841	3	RH42839			12	4951.00			1		AC060226
S/G/Y/R/B/O	NT_009654	AC060226	117658477	3	AFM343XE5					12	571.00	1	AC078870,	AC060226, AC078870
S/G/Y/R/B/O	NT_009654	AC079384	117704995	3
S/G/Y/R/B/O	NT_009654	AC078870	117888469	1
S/G/Y/R/B/O	NT_009654	AC025740	118045978	1	RH39807	12	455.39					1		AC025740
S/G/Y/R/B/O	NT_009654	AC090013	118046844	3
S/G/Y/R/B/O	NT_009654	AC083806	118184631	1	RH26495	12	463.98					1		AC025687, AC083806
S/G/Y/R/B/O	NT_009654	AC083806	118185250	1	WI-16979					12	572.70	1		AC025687, AC083806
S/G/Y/R/B/O	NT_009654	AC083806	118185250	1	RH52734	12	471.58					1		AC025687, AC083806
S/G/Y/R/B/O	NT_009654	AC083806	118188749	1	WI-22060					12	572.80	1		AC025687, AC083806
S/G/Y/R/B/O	NT_009654	AC083806	118188749	1	RH52757	12	471.80					1		AC025687, AC083806
S/G/Y/R/B/O	NT_009654	AC083806	118188967	1	RH98855	12	463.98					1		AC025687, AC083806
S/G/Y/R/B/O	NT_009654		-		RH102845	12	455.70					1	AC010177, AC026765,	AC010177, AC026765
S/G/Y/R/B/O	NT_009654		-		WI-17693					12	572.60	0