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  Chromosome 7 - YAC Map - Single Contig
 

Chromosome 7 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_007819
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007819AC069391286460741      
S/G/Y/R/B/O NT_007819AC079758286540241      
S/G/Y/R/B/O NT_007819AC005105286787533AFMA245YE57111.002AC027122, AC005105, AC027122
S/G/Y/R/B/O NT_007819AC005013288759363WI-71397113.001 AC005013, AC034183
S/G/Y/R/B/O NT_007819AC005013289084213WI-11437112.001 AC005013
S/G/Y/R/B/O NT_007819AC005013290270943FB8B57117.001 AC005013, AC026207, AC069401
S/G/Y/R/B/O NT_007819AC005162290332903      
S/G/Y/R/B/O NT_007819AC007096291447723      
S/G/Y/R/B/O NT_007819AC005232291796083      
S/G/Y/R/B/O NT_007819AC004593292409493      
S/G/Y/R/B/O NT_007819AC004417294089553D7S4407293.001 AC004417
S/G/Y/R/B/O NT_007819AC004417294089553D7S4357114.001 AC004417
S/G/Y/R/B/O NT_007819AC007255295227093CHLC.GGAA11C117116.001 AC007255
S/G/Y/R/B/O NT_007819AC007255295835053D7S24967115.001 AC007255
S/G/Y/R/B/O NT_007819AC007276296751763      
S/G/Y/R/B/O NT_007819AC007280298475493      
S/G/Y/R/B/O NT_007819AC004912299767653IB8587118.001 AC004912
S/G/Y/R/B/O NT_007819AC007285301307933D7S24927120.001 AC007285
S/G/Y/R/B/O NT_007819AC007036302704083AFMA246ZC97119.001 AC007036
S/G/Y/R/B/O NT_007819AC009304303264223      
S/G/Y/R/B/O NT_007819AC006978303328823      
S/G/Y/R/B/O NT_007819AC006027304456883      
S/G/Y/R/B/O NT_007819AC005154305532753WI-62567122.001 AC005154, AC079792, AC092789
S/G/Y/R/B/O NT_007819AC006969306656853      
S/G/Y/R/B/O NT_007819AC004976306905133WI-74117123.001 AC004976
S/G/Y/R/B/O NT_007819AC004976307134813AFMB050YD17121.001 AC004976
S/G/Y/R/B/O NT_007819AC004976307283973CHLC.ATC5A057124.001 AC004976
S/G/Y/R/B/O NT_007819AC006022307983283      
S/G/Y/R/B/O NT_007819AC004691308415943D7S6327127.001 AC004691
S/G/Y/R/B/O NT_007819AC004691309124763WI-23267125.001 AC004691
S/G/Y/R/B/O NT_007819AC004691309655233D7S5267128.001 AC004691, AC007044
S/G/Y/R/B/O NT_007819AC005155309802783WI-91137126.001 AC005155, AC007044
S/G/Y/R/B/O NT_007819AC005155309818063IB5147129.001 AC005155, AC007044
S/G/Y/R/B/O NT_007819AC006466311678403IB12257130.001 AC006466
S/G/Y/R/B/O NT_007819AC006466311701333WI-38257132.001 AC006466
S/G/Y/R/B/O NT_007819AC006466312295463WI-61107131.001 AC006466, AC073132
S/G/Y/R/B/O NT_007819AC006398312540113      
S/G/Y/R/B/O NT_007819AC006380314561773WI-107727133.001 AC006380
S/G/Y/R/B/O NT_007819AC005090314666513      
S/G/Y/R/B/O NT_007819AC006044315826693      
S/G/Y/R/B/O NT_007819AC006325317239783      
S/G/Y/R/B/O NT_007819AC007093317839073      
S/G/Y/R/B/O NT_007819AC006377318432733CHLC.GATA64B057134.001 AC006377
S/G/Y/R/B/O NT_007819AC007033319871523      
S/G/Y/R/B/O NT_007819AC004931321034203AFM190YH2P7135.001 AC004931
S/G/Y/R/B/O NT_007819AC004931321533563CHLC.GATA13G117136.001 AC004931
S/G/Y/R/B/O NT_007819AC004931321827243CHLC.GATA4B03.817138.001 AC004931
S/G/Y/R/B/O NT_007819AC005589322089813      
S/G/Y/R/B/O NT_007819AC018637323770423D7S6907137.001 AC011310, AC018637
S/G/Y/R/B/O NT_007819AC018641325100753      


  NT_007819 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007819AC018633325997993      
S/G/Y/R/B/O NT_007819AC018645327622973      
S/G/Y/R/B/O NT_007819AC018648328779893      
S/G/Y/R/B/O NT_007819AC083863330068583      
S/G/Y/R/B/O NT_007819AC074338331777443      
S/G/Y/R/B/O NT_007819AC007312332546623      
S/G/Y/R/B/O NT_007819AC087070333692083      
S/G/Y/R/B/O NT_007819AC006195335556353WI-54937142.001AC078833, AC006195, AC078833
S/G/Y/R/B/O NT_007819AC078833336384973AFMB073ZC97140.001AC018664, AC018664
S/G/Y/R/B/O NT_007819AC078833336521593CHLC.GATA86D017141.001AC018664, AC018664, AC078833
S/G/Y/R/B/O NT_007819AC018664336870373      
S/G/Y/R/B/O NT_007819AC008080337946793      
S/G/Y/R/B/O NT_007819AC010002339668743WI-57887143.001 AC010002
S/G/Y/R/B/O NT_007819AC007350341137083D7S6837147.001 AC007350
S/G/Y/R/B/O NT_007819AC007350342137413D7S6567139.001AC009262, AC007350, AC009262
S/G/Y/R/B/O NT_007819AC009262342342463      
S/G/Y/R/B/O NT_007819AC005686343426743      
S/G/Y/R/B/O NT_007819AC005582343842493      
S/G/Y/R/B/O NT_007819AC005685344594163WI-57127144.001 AC005685
S/G/Y/R/B/O NT_007819AC005502344674043      
S/G/Y/R/B/O NT_007819AC005490345036213      
S/G/Y/R/B/O NT_007819AC005852345393003      
S/G/Y/R/B/O NT_007819AC005688345751473      
S/G/Y/R/B/O NT_007819AC005491346393463AFM067XA97145.001 AC005491
S/G/Y/R/B/O NT_007819AC005173346520163      
S/G/Y/R/B/O NT_007819AC005493346893843      
S/G/Y/R/B/O NT_007819AC005680347314553      
S/G/Y/R/B/O NT_007819AC005492347696693      
S/G/Y/R/B/O NT_007819AC005174348076173      
S/G/Y/R/B/O NT_007819AC005862348427263      
S/G/Y/R/B/O NT_007819AC005853348835263      
S/G/Y/R/B/O NT_007819AC004788349151473      
S/G/Y/R/B/O NT_007819AC004711349524303      
S/G/Y/R/B/O NT_007819AC005271349920213      
S/G/Y/R/B/O NT_007819AC004712350360433      
S/G/Y/R/B/O NT_007819AC005401350683033      
S/G/Y/R/B/O NT_007819AC005400351062223      
S/G/Y/R/B/O NT_007819AC004800351453663      
S/G/Y/R/B/O NT_007819AC005826353013473D7S4847148.001 AC005826
S/G/Y/R/B/O NT_007819AC009531353355343      
S/G/Y/R/B/O NT_007819AC007652354389143      
S/G/Y/R/B/O NT_007819AC009333355892173      
S/G/Y/R/B/O NT_007819AC018647356700583WI-31467149.001 AC018647
S/G/Y/R/B/O NT_007819AC007551358035183      
S/G/Y/R/B/O NT_007819AC087072359594043WI-93897151.001 AC079854, AC087072
S/G/Y/R/B/O NT_007819AC087072359619453NIB12887150.001 AC079854, AC080127, AC087072
S/G/Y/R/B/O NT_007819AC083864360735423AFM312ZA57153.001AC078841, AC078841, AC079854, AC083864
S/G/Y/R/B/O NT_007819AC078841361578623      
S/G/Y/R/B/O NT_007819AC007327363040023D7S22517152.001AC008266, AC007327, AC008266, AC084801
S/G/Y/R/B/O NT_007819AC008266363864033      


  NT_007819 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007819AC006960364745003      
S/G/Y/R/B/O NT_007819AC083876365681233WI-90887154.001 AC083876
S/G/Y/R/B/O NT_007819AC087069366911443      
S/G/Y/R/B/O NT_007819AC007349367870163      
S/G/Y/R/B/O NT_007819AC078844369605083      
S/G/Y/R/B/O NT_007819AC009196371266473      
S/G/Y/R/B/O NT_007819AC007444372254213WI-54477155.001 AC007444
S/G/Y/R/B/O NT_007819AC083861373266923      
S/G/Y/R/B/O NT_007819AC078843374220203      
S/G/Y/R/B/O NT_007819AC009530375752483CHLC.GATA74A047156.001 AC009530
S/G/Y/R/B/O NT_007819AC009530375753363CHLC.GATA84F067157.001 AC009530
S/G/Y/R/B/O NT_007819AC083860376467223      
S/G/Y/R/B/O NT_007819AC083865377832983      
S/G/Y/R/B/O NT_007819AC018634380436643D7S5287158.001 AC018634, AC084210
S/G/Y/R/B/O NT_007819AC096544380483303      
S/G/Y/R/B/O NT_007819AC073068380590393      
S/G/Y/R/B/O NT_007819AC093460382280913      
S/G/Y/R/B/O NT_007819AC006033382769833D7S24977159.001 AC006033
S/G/Y/R/B/O NT_007819AC007245384397593WI-93577160.001 AC007245
S/G/Y/R/B/O NT_007819AC012490385389473      
S/G/Y/R/B/O NT_007819AC096581386105543      
S/G/Y/R/B/O NT_007819AC011309386373873      
S/G/Y/R/B/O NT_007819AC004850387482533      
S/G/Y/R/B/O NT_007819AC005247389156143D7S25077161.001 AC005247
S/G/Y/R/B/O NT_007819AC011292389778403      
S/G/Y/R/B/O NT_007819AC073345391476303WI-51547163.001 AC073345, AC073961
S/G/Y/R/B/O NT_007819AC073345392052023D7S5107162.001 AC073345
S/G/Y/R/B/O NT_007819AC092174393765703WI-46627164.001 AC092174
S/G/Y/R/B/O NT_007819AC005483393855983      
S/G/Y/R/B/O NT_007819AC011290395452653      
S/G/Y/R/B/O NT_007819AC004837396833843D7S6687166.001 AC004837
S/G/Y/R/B/O NT_007819AC004837397529063D7S4857165.001 AC004837
S/G/Y/R/B/O NT_007819AC004987397984663      
S/G/Y/R/B/O NT_007819AC093081399094243      
S/G/Y/R/B/O NT_007819AC072061399235123      
S/G/Y/R/B/O NT_007819AC006023400893643      
S/G/Y/R/B/O NT_007819AC025536402792813D7S25247168.001 AC025536
S/G/Y/R/B/O NT_007819AC026866403293983WI-30507167.001 AC026866
S/G/Y/R/B/O NT_007819AC092030404765993      
S/G/Y/R/B/O NT_007819AC004988406725253AFM123XB107170.001 AC004988
S/G/Y/R/B/O NT_007819AC005030407317213D7S25417169.001 AC005030
S/G/Y/R/B/O NT_007819AC005030407584793WI-8747171.001 AC005030, AC079224
S/G/Y/R/B/O NT_007819AC079149408246463      
S/G/Y/R/B/O NT_007819AC005160408321093      
S/G/Y/R/B/O NT_007819AC005029410175093D7S5217172.001 AC005029
S/G/Y/R/B/O NT_007819AC005022411438363      
S/G/Y/R/B/O NT_007819AC006573412472013      
S/G/Y/R/B/O NT_007819AC004843412579993      
S/G/Y/R/B/O NT_007819AC013455413944543      
S/G/Y/R/B/O NT_007819AC004934414080273      


  NT_007819 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007819AC012596415340803      
S/G/Y/R/B/O NT_007819AC005027417586753AFMA283XF57173.001 AC005027
S/G/Y/R/B/O NT_007819AC005027417595353D7S25487174.001 AC005027
S/G/Y/R/B/O NT_007819AC005028419784363D7S6717177.001 AC005028
S/G/Y/R/B/O NT_007819AC005028420191703D7S27467176.001 AC005028
S/G/Y/R/B/O NT_007819AC005026420450213D7S6917175.001 AC005026
S/G/Y/R/B/O NT_007819AC073852421580173      
S/G/Y/R/B/O NT_007819AC005158421728163      
S/G/Y/R/B/O NT_007819AC011296424389603      
S/G/Y/R/B/O NT_007819AC092027425692733      
S/G/Y/R/B/O NT_007819AC073181425847943      
S/G/Y/R/B/O NT_007819AC099798426878313      
S/G/Y/R/B/O NT_007819AC027269427890203WI-6207178.001 AC015515, AC027269
S/G/Y/R/B/O NT_007819AC010132428566363      
S/G/Y/R/B/O NT_007819AC005537430231163      
S/G/Y/R/B/O NT_007819AC004455432655853D7S24287179.001 AC004455
S/G/Y/R/B/O NT_007819AC004692432968833D7S6787180.001 AC004692
S/G/Y/R/B/O NT_007819AC006365434945073WI-5517181.001 AC006365
S/G/Y/R/B/O NT_007819AC011738435584083WI-34167182.001 AC011738
S/G/Y/R/B/O NT_007819AC011738435678683WI-67217183.001 AC011738
S/G/Y/R/B/O NT_007819AC093645436441753      
S/G/Y/R/B/O NT_007819AC005189436946813WI-95477184.001 AC005189
S/G/Y/R/B/O NT_007819AC004939438530013      
S/G/Y/R/B/O NT_007819AC004985439219813WI-81287185.001 AC004985, AC073104, AC087881
S/G/Y/R/B/O NT_007819AC004951440208253      
S/G/Y/R/B/O NT_007819AC017116440726183      
S/G/Y/R/B/O NT_007819AC006454441568213      
S/G/Y/R/B/O NT_007819AC093086443080233      
S/G/Y/R/B/O NT_007819AC106040443706243      
S/G/Y/R/B/O NT_007819AC004453444390143WI-96357189.001AC093630, AC004453, AC093630
S/G/Y/R/B/O NT_007819AC004453444390143IB13127187.001AC093630, AC004453, AC093630
S/G/Y/R/B/O NT_007819AC004453444858703D7S25287186.001AC093630, AC004453, AC093630
S/G/Y/R/B/O NT_007819AC004453445100623AFMA309XB17190.001AC093630, AC004453, AC093630
S/G/Y/R/B/O NT_007819AC004453445181533D7S6677188.001AC093630, AC004453, AC093630
S/G/Y/R/B/O NT_007819AC004938446212273WI-65817191.001 AC004938
S/G/Y/R/B/O NT_007819AC004938446337323WI-81447193.001 AC004938
S/G/Y/R/B/O NT_007819AC011894446446263      
S/G/Y/R/B/O NT_007819AC004859447357983D7S24367194.001 AC004859
S/G/Y/R/B/O NT_007819AC004859447643053NIB14177192.001 AC004859
S/G/Y/R/B/O NT_007819AC013436448139783      
S/G/Y/R/B/O NT_007819AC004854449479723D7S4787195.001 AC004854
S/G/Y/R/B/O NT_007819AC004847449760983      
S/G/Y/R/B/O NT_007819AC013416450981783      
S/G/Y/R/B/O NT_007819AC004844452159053      
S/G/Y/R/B/O NT_007819AC073968453811073WI-59707196.001 AC073968
S/G/Y/R/B/O NT_007819AC073325454496453      
S/G/Y/R/B/O NT_007819AC069008456440843AFM158XB127197.001 AC069008
S/G/Y/R/B/O NT_007819AC091439457065693      
S/G/Y/R/B/O NT_007819AC096582458083443      
S/G/Y/R/B/O NT_007819AC091524459485133WI-75897198.001 AC091524, M59316, M74587


  NT_007819 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007819AC091524459677733WI-71617199.001 AC091524, M35878
S/G/Y/R/B/O NT_007819AC091524459677733WI-60497200.001 AC091524, M35878
S/G/Y/R/B/O NT_007819AC073115460063533      
S/G/Y/R/B/O NT_007819AC079757461734843      
S/G/Y/R/B/O NT_007819AC023669462572183CHLC.GATA2G07761.001 AC023669
S/G/Y/R/B/O NT_007819AC092657463907543      
S/G/Y/R/B/O NT_007819AC004869464599563      
S/G/Y/R/B/O NT_007819AC011294466170013      
S/G/Y/R/B/O NT_007819AC073275467835163      
S/G/Y/R/B/O NT_007819AC091999468951893      
S/G/Y/R/B/O NT_007819AC004901469590763WI-51087204.001 AC004901
S/G/Y/R/B/O NT_007819AC004870471447203WI-30487205.001 AC004870
S/G/Y/R/B/O NT_007819AC012590471516973D7S6797206.001 AC012590
S/G/Y/R/B/O NT_007819AC012590471847933D7S6707207.001 AC012590
S/G/Y/R/B/O NT_007819AC087175473008133      
S/G/Y/R/B/O NT_007819AC073341474092493D7S25617208.001 AC073341
S/G/Y/R/B/O NT_007819AC073341474318733D7S6657209.001 AC073341
S/G/Y/R/B/O NT_007819AC092000475053813      
S/G/Y/R/B/O NT_007819AC095067476961433D7S25067210.001 AC018998, AC095067
S/G/Y/R/B/O NT_007819AC104696477467633      
S/G/Y/R/B/O NT_007819AC019066477735143      
S/G/Y/R/B/O NT_007819AC069282478667323      
S/G/Y/R/B/O NT_007819AC069279480819273AFMA139YG57211.001 AC069279
S/G/Y/R/B/O NT_007819AC093630481462681      
S/G/Y/R/B/O NT_007819AC079752481550511      
S/G/Y/R/B/O NT_007819 - D7S4977146.000  
S/G/Y/R/B/O NT_007819 - D7S5197201.001AC092061, AC073350, AC092061
S/G/Y/R/B/O NT_007819 - WI-96767202.001AL139244, AC004962, AL139244
S/G/Y/R/B/O NT_007819 - CHLC.GATA41G077203.001AC005060, AC005060