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  Chromosome 7 - YAC Map - Single Contig
 

Chromosome 7 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_007834
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007834AC079252710293621      
S/G/Y/R/B/O NT_007834AC115107710314851      
S/G/Y/R/B/O NT_007834AC006014711087953D7S4897270.004AC005049, AC005488, AC061712, AC115107, AC005049, AC005488, AC006014, AC061712, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007834AC006014711399543AFM116YG57261.002AC073841, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007834AC006014711848393WI-29357276.002AC004980, AC005488, AC004980, AC005488, AC006014, AC073108, AC106885, AC116561, AL161642
S/G/Y/R/B/O NT_007834AC018720711867233      
S/G/Y/R/B/O NT_007834AC004491714522973WI-94467272.001 AC004491
S/G/Y/R/B/O NT_007834AC004491714815963D7S24907273.001 AC004491
S/G/Y/R/B/O NT_007834AC006025714971413      
S/G/Y/R/B/O NT_007834AC005102715023583      
S/G/Y/R/B/O NT_007834AC005067716301393NIB7267271.001 AC005067
S/G/Y/R/B/O NT_007834AC006330716979143      
S/G/Y/R/B/O NT_007834AC005077718697163WI-74527275.001 AC005077
S/G/Y/R/B/O NT_007834AC005077720325773WI-48147274.001 AC005077, AC091740
S/G/Y/R/B/O NT_007834AC006388720341923      
S/G/Y/R/B/O NT_007834AC005522721969893WI-10047278.003AC004980, AC114737, AC004980, AC005522, AC073108, AC106885, AC114737, AC116561, AC116566, AC116566, AL161642
S/G/Y/R/B/O NT_007834AC007078722426383      
S/G/Y/R/B/O NT_007834AC004980722949823WI-74287277.002AL357072, AL391429, AC004980, AC006031, AC106885, AC116561, AC116566, AL161642, AL357072, AL391429
S/G/Y/R/B/O NT_007834AC004980723625893WI-10047278.003AC005522, AC114737, AC004980, AC005522, AC073108, AC106885, AC114737, AC116561, AC116566, AC116566, AL161642
S/G/Y/R/B/O NT_007834AC004980723694143WI-29357276.002AC005488, AC006014, AC004980, AC005488, AC006014, AC073108, AC106885, AC116561, AL161642
S/G/Y/R/B/O NT_007834AC006972724642073      
S/G/Y/R/B/O NT_007834AC007003726357443      
S/G/Y/R/B/O NT_007834AC114737726950763WI-10047278.003AC004980, AC005522, AC004980, AC005522, AC073108, AC106885, AC114737, AC116561, AC116566, AC116566, AL161642
S/G/Y/R/B/O NT_007834AC007000727648583      
S/G/Y/R/B/O NT_007834AC098851729615183      
S/G/Y/R/B/O NT_007834AC073635730198643      
S/G/Y/R/B/O NT_007834AC004921730954913      
S/G/Y/R/B/O NT_007834AC006451732457483WI-54927279.001 AC006451
S/G/Y/R/B/O NT_007834AC090421733913893      
S/G/Y/R/B/O NT_007834AC004955734835463D7S24557280.001 AC004955
S/G/Y/R/B/O NT_007834AC073520735531413      
S/G/Y/R/B/O NT_007834AC004990736571723D7S6757282.001 AC091528
S/G/Y/R/B/O NT_007834AC004990737859553D7S24217283.001 AC004990
S/G/Y/R/B/O NT_007834AC004808738202133D7S25177281.001 AC004808
S/G/Y/R/B/O NT_007834AC073200739845733D7S6697284.001 AC073200
S/G/Y/R/B/O NT_007834AC006043741322523WI-19707287.001 AC006043
S/G/Y/R/B/O NT_007834AC007361741738113      
S/G/Y/R/B/O NT_007834AC007237742386953CHLC.GATA73D107286.001 AC007237
S/G/Y/R/B/O NT_007834AC007237742390843WI-58167285.001 AC007237
S/G/Y/R/B/O NT_007834AC007237742961843CHLC.GATA8G028440.001 AC007237, AC023307
S/G/Y/R/B/O NT_007834AC005246743406913      
S/G/Y/R/B/O NT_007834AC004547744299433      
S/G/Y/R/B/O NT_007834AC008071745603753      
S/G/Y/R/B/O NT_007834AC073092746901133      
S/G/Y/R/B/O NT_007834AC006324747319263AFM312XB57288.001 AC006324
S/G/Y/R/B/O NT_007834AC006355748532563      
S/G/Y/R/B/O NT_007834AC074024749906673      
S/G/Y/R/B/O NT_007834AC004945750888083      
S/G/Y/R/B/O NT_007834AC091813752559803      
S/G/Y/R/B/O NT_007834AC092201753129383      


  NT_007834 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007834AC073048753753123      
S/G/Y/R/B/O NT_007834AC079589755394983      
S/G/Y/R/B/O NT_007834AC004548755590043      
S/G/Y/R/B/O NT_007834AC004109756639313      
S/G/Y/R/B/O NT_007834AC004454757329323      
S/G/Y/R/B/O NT_007834AC004159758132463      
S/G/Y/R/B/O NT_007834AC080066759586603D7S27417294.001 AC080066
S/G/Y/R/B/O NT_007834AC080066759591183NIB12597295.001 AC080066
S/G/Y/R/B/O NT_007834AC003988759946783      
S/G/Y/R/B/O NT_007834AC004862760532033      
S/G/Y/R/B/O NT_007834AC092108762118143      
S/G/Y/R/B/O NT_007834AC073182762361633      
S/G/Y/R/B/O NT_007834AL355313763571071      
S/G/Y/R/B/O NT_007834AC073850764228173WI-91097292.001AL355313, AC073850, AL355313
S/G/Y/R/B/O NT_007834AC093683765714643      
S/G/Y/R/B/O NT_007834AC004880765758643      
S/G/Y/R/B/O NT_007834AC004972766855863CHLC.GATA21D087291.001 AC004972
S/G/Y/R/B/O NT_007834AC004972767159453D7S6607289.001 AC004972
S/G/Y/R/B/O NT_007834AC004972767634073AFMB355XB97290.001 AC004972
S/G/Y/R/B/O NT_007834AC074089768073383      
S/G/Y/R/B/O NT_007834AC074214768445803      
S/G/Y/R/B/O NT_007834AC092444768858563      
S/G/Y/R/B/O NT_007834AC005008768910483      
S/G/Y/R/B/O NT_007834AC004541769806823      
S/G/Y/R/B/O NT_007834AC004866770694693      
S/G/Y/R/B/O NT_007834AC008163772073713      
S/G/Y/R/B/O NT_007834AC010091773424713      
S/G/Y/R/B/O NT_007834AC004960773991353      
S/G/Y/R/B/O NT_007834AC009493775427693      
S/G/Y/R/B/O NT_007834AC079254776290853      
S/G/Y/R/B/O NT_007834AC006145776361503      
S/G/Y/R/B/O NT_007834AC008283777806093      
S/G/Y/R/B/O NT_007834AC004989778376963      
S/G/Y/R/B/O NT_007834AC004892779225543      
S/G/Y/R/B/O NT_007834AC005159779886273      
S/G/Y/R/B/O NT_007834AC004970780683413      
S/G/Y/R/B/O NT_007834AC004894782282113WI-38107296.001 AC004894, AL136308
S/G/Y/R/B/O NT_007834AC004006783824033      
S/G/Y/R/B/O NT_007834AC004082785016563      
S/G/Y/R/B/O NT_007834AC080093786232503WI-52397297.001 AC080093
S/G/Y/R/B/O NT_007834AC004886786368073      
S/G/Y/R/B/O NT_007834AC004903788752843WI-39747298.001 AC004903
S/G/Y/R/B/O NT_007834AC093461789138833CHLC.GATA87D117299.001 AC093461
S/G/Y/R/B/O NT_007834AC004027789340483      
S/G/Y/R/B/O NT_007834AC079799790652403      
S/G/Y/R/B/O NT_007834AC079987792340353D7S25407300.001 AC084267
S/G/Y/R/B/O NT_007834AC006204792406953      
S/G/Y/R/B/O NT_007834AC004954793850583      
S/G/Y/R/B/O NT_007834AC079113794715263      
S/G/Y/R/B/O NT_007834AC006322795659953      


  NT_007834 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007834AC073221797762783WI-52877302.001 AC073110, AC073221
S/G/Y/R/B/O NT_007834AC004848799064803CHLC.GATA3F01.5117301.001 AC004848
S/G/Y/R/B/O NT_007834AC004451799957073CHLC.GATA73F127303.001 AC004451
S/G/Y/R/B/O NT_007834AC004028800975603WI-39907304.001AC068632, AC004028, AC068632
S/G/Y/R/B/O NT_007834AC079351801586141      
S/G/Y/R/B/O NT_007834AC068632801591371      
S/G/Y/R/B/O NT_007834AC004907802849463D7S24177306.001 AC004907
S/G/Y/R/B/O NT_007834AC003984802919983      
S/G/Y/R/B/O NT_007834AC092022804928613AFMC016XG97307.001 AC092014, AC092022
S/G/Y/R/B/O NT_007834AC092022805263803AFMA060XE57305.001 AC092014, AC092022
S/G/Y/R/B/O NT_007834AC093716805297263      
S/G/Y/R/B/O NT_007834AC074183806047543      
S/G/Y/R/B/O NT_007834AC004957807998263D7S5247308.001 AC004957
S/G/Y/R/B/O NT_007834AC006151808740263      
S/G/Y/R/B/O NT_007834AC090422810098323      
S/G/Y/R/B/O NT_007834AC073958810447093D7S25377309.001 AC073958
S/G/Y/R/B/O NT_007834AC074112812995453AFMB320VH17310.001 AC074112
S/G/Y/R/B/O NT_007834AC099551813271333      
S/G/Y/R/B/O NT_007834AC092013813475003      
S/G/Y/R/B/O NT_007834AC096562814752563      
S/G/Y/R/B/O NT_007834AC084793816114803      
S/G/Y/R/B/O NT_007834AC004413817108403D7S25557311.001 AC004413
S/G/Y/R/B/O NT_007834AC004926817685963      
S/G/Y/R/B/O NT_007834AC006374819219523      
S/G/Y/R/B/O NT_007834AC079740820823783      
S/G/Y/R/B/O NT_007834AC007035821078043      
S/G/Y/R/B/O NT_007834AC073903822862013      
S/G/Y/R/B/O NT_007834AC004829823854763WI-34667312.001 AC004829, AC027785
S/G/Y/R/B/O NT_007834AC004829824055193D7S6447313.001 AC004829
S/G/Y/R/B/O NT_007834AC005009824961693      
S/G/Y/R/B/O NT_007834AC002081826958863D7S24817314.001 AC002081, AL357495
S/G/Y/R/B/O NT_007834AC000122827031543      
S/G/Y/R/B/O NT_007834AC004519827329333      
S/G/Y/R/B/O NT_007834AC004023828406223      
S/G/Y/R/B/O NT_007834AC005076829001233      
S/G/Y/R/B/O NT_007834AC073423830580693      
S/G/Y/R/B/O NT_007834 - D7S4407293.001AC004417, AC004417