VGP - Vertebrate Genomes Project assembly hub

VGP logo

This assembly hub contains assemblies released by the Vertebrate Genomes Project. (set of primary assemblies)

How to view the hub

Options:

  1. The links to the genome browser in the table below will attach that one specific assembly to the genome browser. This is most likely what you want. Alternatively, the entire set of assemblies can be attached as one group to the genome browser with the following links depending upon which of our mirror site browsers you prefer to use:
    attach all assemblies to selected site:   genome.ucsc.edu   genome-euro.ucsc.edu   genome-asia.ucsc.edu
  2. To manually attach all the assemblies in this hub to genome browsers that are not one of the three UCSC mirror sites:
    1. From the blue navigation bar, go to My Data -> Track Hubs
    2. Then select the My Hubs tab and enter this URL into the textbox:
      https://hgdownload.soe.ucsc.edu/hubs/VGP/hub.txt
    3. Once you have added the URL to the entry form, press the Add Hub button to add the hub.

After adding the hub, you will be redirected to the gateway page. The genome assemblies can be selected from the VGP Hub Assembly dropdown menu. Instead of adding all the assemblies in one collected group, use the individual view in browser in the table below.

See also: assembly statisticstrack statistics <== additional information for these assemblies.


Data resource links

NOTE: Click on the column headers to sort the table by that column

The common name and view in browser will attach only that single assembly to the genome browser.
The scientific name and data download link provides access to the files for that one assembly hub.
The class VGP link provides access to the VGP GenomeArk page for that genome.
The other links provide access to NCBI resources for these assemblies.
count common name and
view in browser
scientific name
and data download
NCBI assembly BioSample BioProject assembly date,
source link
class
VGP link
1 Abyssinian ground-hornbill Bucorvus abyssinicus GCA_009769605.1_bBucAby1.pri SAMN12614799 PRJNA561887 2019-12-23 birds
2 American flamingo Phoenicopterus ruber ruber GCA_009819775.1_bPhoRub2.pri SAMN12614931 PRJNA561888 2019-12-31 birds
3 American shad Alosa sapidissima GCF_018492685.1_fAloSap1.pri SAMN18857608 PRJNA728145 2021-05-25 fish
4 Anna's hummingbird Calypte anna GCA_003957555.2_bCalAnn1_v1.p SAMN02265252 PRJNA489139 2019-05-16 birds
5 Aristotle's catfish (2022 VGP) Silurus aristotelis GCA_946808225.1_fSilAri3.1 SAMEA12595289 PRJEB55686 2022-09-15 fish
6 Asian bonytongue Scleropages formosus GCF_900964775.1_fSclFor1.1 SAMEA4872123 PRJEB31995 2019-04-11 fish
7 Asiatic elephant (2022 VGP) Elephas maximus indicus GCF_024166365.1_mEleMax1_primary_haplotype SAMN29174328 PRJNA850184 2022-07-06 mammals
8 Atlantic cod Gadus morhua GCF_902167405.1_gadMor3.0 SAMEA5574046 PRJEB33455 2019-07-16 fish
9 Atlantic halibut (refseq) Hippoglossus hippoglossus GCF_009819705.1_fHipHip1.pri SAMN12629501 PRJNA562001 2019-12-31 fish
10 Atlantic horse mackerel (2021 VGP) Trachurus trachurus GCA_905171665.2_fTraTra1.2 SAMEA7524396 PRJEB42172 2021-11-26 fish
11 Australian echidna Tachyglossus aculeatus GCF_015852505.1_mTacAcu1.pri SAMN12634963 PRJNA607237 2020-12-09 mammals
12 banded archerfish Toxotes jaculatrix GCF_017976425.1_fToxJac2.pri SAMN18445299 PRJNA717046 2021-04-15 fish
13 barbel (2022 VGP) Barbus barbus GCA_936440315.1_fBarBab1.1 SAMEA13335783 PRJEB52077 2022-05-03 fish
14 barn swallow Hirundo rustica GCF_015227805.1_bHirRus1.pri.v2 SAMN14675488 PRJNA636192 2021-03-02 birds
15 black rhinoceros (2021 VGP) Diceros bicornis minor GCA_020826845.1_mDicBic1.mat.cur SAMN22047685 PRJNA773944 2021-11-10 mammals
16 blackcap Sylvia atricapilla GCA_009819655.1_bSylAtr1.pri SAMN12369542 PRJNA558064 2019-12-31 birds
17 Blainville's beaked whale ( 2022 VGP) Mesoplodon densirostris GCA_025265405.1_mMesDen1_primary_haplotype SAMN29828597 PRJNA873668 2022-09-19 mammals
18 blue whale Balaenoptera musculus GCF_009873245.2_mBalMus1.pri.v3 SAMN12287136 PRJNA554522 2020-10-02 mammals
19 blunt-snouted clingfish Gouania willdenowi GCF_900634775.1_fGouWil2.1 SAMEA104026382 PRJEB30359 2019-02-06 fish
20 Boeseman's rainbowfish Melanotaenia boesemani GCF_017639745.1_fMelBoe1.pri SAMN12623618 PRJNA561965 2021-03-30 fish
21 bonti-bonti (T.bonti 2022 VGP) Telmatherina bonti GCA_933228915.1_fTelBon1.1 SAMEA8592627 PRJEB51590 2022-03-23 fish
22 brown argus butterfly Aricia agestis GCF_905147365.1_ilAriAges1.1 SAMEA7523300 PRJEB41901 2021-01-28 insects
23 butterfish (2021 G10K VGP) Scatophagus argus GCF_020382885.2_fScaArg1.pri SAMN12623616 PRJNA749579 2021-10-13 fish
24 California sea lion Zalophus californianus GCF_009762305.2_mZalCal1.pri.v2 SAMN12368149 PRJNA559673 2020-07-14 mammals
25 Canada lynx Lynx canadensis GCF_007474595.2_mLynCan4.pri.v2 SAMN09948483 PRJNA489107 2020-07-14 mammals
26 carmine bee-eater Merops nubicus GCA_009819595.1_bMerNub1.pri SAMN12621035 PRJNA561894 2019-12-31 birds
27 channel bull blenny Cottoperca gobio GCF_900634415.1_fCotGob3.1 SAMEA104242975 PRJEB30248 2019-02-06 fish
28 climbing perch Anabas testudineus GCF_900324465.2_fAnaTes1.2 SAMEA104026376 PRJEB25768 2018-12-19 fish
29 common brushtail Trichosurus vulpecula GCF_011100635.1_mTriVul1.pri SAMN12629507 PRJNA562014 2020-03-10 mammals
30 common cuckoo (VGP 2021) Cuculus canorus GCA_017976375.1_bCucCan1.pri SAMN12629508 PRJNA562015 2021-04-15 birds
31 common pipistrelle (2020 VGP) Pipistrellus pipistrellus GCA_903992545.1_mPipPip1.1 SAMEA994724 PRJEB39564 2020-08-06 mammals
32 common swift (bApuApu2 2021 VGP refseq) Apus apus GCF_020740795.1_bApuApu2.pri.cur SAMN22785356 PRJNA776336 2021-11-04 birds
33 common tern Sterna hirundo GCA_009819605.1_bSteHir1.pri SAMN12369541 PRJNA558062 2019-12-31 birds
34 common toad Bufo bufo GCF_905171765.1_aBufBuf1.1 SAMEA7521636 PRJEB42168 2021-01-28 amphibians
35 common yellowthroat Geothlypis trichas GCA_009764595.1_bGeoTri1.pri SAMN12631222 PRJNA589703 2019-12-19 birds
36 convict blenny (chichlid 2021 VGP) Pholidichthys leucotaenia GCA_020510985.1_fPhoLeu1.pri SAMN12623617 PRJNA749575 2021-10-15 fish
37 copperband butterflyfish Chelmon rostratus GCF_017976325.1_fCheRos1.pri SAMN12623620 PRJNA561969 2021-04-15 fish
38 cunner (2021 VGP) Tautogolabrus adspersus GCA_020745685.1_fTauAds1.pri.cur SAMN22589422 PRJNA774878 2021-11-05 fish
39 dark-edged splitfin (DD_20200921_A 2022 VGP) Girardinichthys multiradiatus GCF_021462225.1_DD_fGirMul_XY1 SAMN22242658 PRJNA768329 2022-02-24 fish
40 denticle herring Denticeps clupeoides GCF_900700375.1_fDenClu1.1 SAMEA104129917 PRJEB31545 2019-03-16 fish
41 downy woodpecker (VGP 2020) Dryobates pubescens GCA_014839835.1_bDryPub1.pri SAMN12629497 PRJNA561991 2020-10-02 birds
42 East African grey crowned-crane Balearica regulorum gibbericeps GCA_011004875.1_bBalReg1.pri SAMN12615749 PRJNA561890 2020-03-05 birds
43 eastern happy Astatotilapia calliptera GCF_900246225.1_fAstCal1.2 SAMEA104026430 PRJEB24325 2018-05-30 fish
44 Egyptian rousette Rousettus aegyptiacus GCF_014176215.1_mRouAeg1.p SAMN14734550 PRJNA628585 2020-08-07 mammals
45 electric eel Electrophorus electricus GCF_013358815.1_fEleEle1.pri SAMN12623625 PRJNA561981 2020-06-23 fish
46 emu (2020) Dromaius novaehollandiae GCA_016128335.1_ZJU1.0 SAMN15183959 PRJNA638233 2020-12-20 birds
47 ermine Mustela erminea GCF_009829155.1_mMusErm1.Pri SAMN12611999 PRJNA561931 2020-01-03 mammals
48 Eurasian badger (2021 VGP) Meles meles GCA_922990625.1_mMelMel3.1_maternal_haplotype_uncurated SAMEA7524400 PRJEB49352 2021-12-18 mammals
49 Eurasian nightjar Caprimulgus europaeus GCA_907165065.1_bCapEur3.1 SAMEA7524394 PRJEB44540 2021-05-17 birds
50 Eurasian red squirrel Sciurus vulgaris GCA_902686455.1_mSciVul1.1 SAMEA994733 PRJEB35380 2019-11-26 mammals
51 Eurasian river otter (2020 VGP) Lutra lutra GCF_902655055.1_mLutLut1.2 SAMEA994731 PRJEB35339 2020-07-31 mammals
52 Eurasian water vole (2021) Arvicola amphibius GCF_903992535.2_mArvAmp1.2 SAMEA994740 PRJEB39550 2021-05-15 mammals
53 European common frog Rana temporaria GCF_905171775.1_aRanTem1.1 SAMEA7521635 PRJEB42171 2021-01-28 amphibians
54 European eel Anguilla anguilla GCF_013347855.1_fAngAng1.pri SAMN12623627 PRJNA561979 2020-06-18 fish
55 European golden plover Pluvialis apricaria GCA_017639485.1_bPluApr1.pri SAMN18353970 PRJNA715924 2021-03-30 birds
56 European robin Erithacus rubecula GCA_903797595.2_bEriRub2.2 SAMEA4760689 PRJEB38658 2021-05-03 birds
57 European starfish Asterias rubens GCF_902459465.1_eAstRub1.3 SAMEA994741 PRJEB33974 2020-02-12 echinoderm
58 European turtle dove (v1.2 2021 VGP) Streptopelia turtur GCA_901699155.2_bStrTur1.2 SAMEA994735 PRJEB32724 2021-05-17 birds
59 European woodmouse (2022 VGP) Apodemus sylvaticus GCA_947179515.1_mApoSyl1.1 SAMEA7702024 PRJEB56948 2022-10-28 mammals
60 flier cichlid Archocentrus centrarchus GCF_007364275.1_fArcCen1 SAMN09948522 PRJNA489129 2019-08-01 fish
61 freshwater garfish (fXenCan1 2020 VGP) Xenentodon cancila GCA_014839995.1_fXenCan1.pri SAMN12623622 PRJNA561973 2020-10-02 fish
62 Gabon caecilian Geotrypetes seraphini GCF_902459505.1_aGeoSer1.1 SAMEA104387963 PRJEB33992 2019-08-18 amphibians
63 garden warbler Sylvia borin GCA_014839755.1_bSylBor1.pri SAMN12618613 PRJNA561945 2020-10-02 birds
64 gilthead seabream Sparus aurata GCF_900880675.1_fSpaAur1.1 SAMEA104384835 PRJEB31901 2019-07-30 fish
65 golden eagle (2021) Aquila chrysaetos chrysaetos GCF_900496995.4_bAquChr1.4 SAMEA994725 PRJEB27699 2021-03-26 birds
66 golden spiny mouse (2020 VGP) Acomys russatus GCF_903995435.1_mAcoRus1.1 SAMEA104026431 PRJEB39768 2020-08-21 mammals
67 Goodes thornscrub tortoise Gopherus evgoodei GCF_007399415.2_rGopEvg1_v1.p SAMN03496275 PRJNA489103 2019-07-25 reptiles
68 gray squirrel (2020 VGP) Sciurus carolinensis GCF_902686445.1_mSciCar1.2 SAMEA994726 PRJEB35386 2020-07-31 mammals
69 gray wolf (2021 VGP) Canis lupus GCA_905319855.2_mCanLor1.2 SAMEA7532739 PRJEB43200 2021-03-26 mammals
70 great potoo Nyctibius grandis GCA_013368605.1_bNycGra1.pri SAMN12622411 PRJNA562020 2020-06-23 birds
71 great scallop Pecten maximus GCF_902652985.1_xPecMax1.1 SAMEA994736 PRJEB35330 2019-11-26 molluscs
72 great white shark Carcharodon carcharias GCF_017639515.1_sCarCar2.pri SAMN12629504 PRJNA562007 2021-03-30 sharks
73 greater horseshoe bat Rhinolophus ferrumequinum GCA_004115265.2_mRhiFer1_v1.p SAMN09948510 PRJNA489106 2019-05-16 mammals
74 greater pipefish Syngnathus acus GCF_901709675.1_fSynAcu1.2 SAMEA104381750 PRJEB32741 2020-07-31 fish
75 greater mouse-eared bat Myotis myotis GCF_014108235.1_mMyoMyo1.p SAMN14734277 PRJNA628559 2020-08-07 mammals
76 green sea turtle (v2 2021) Chelonia mydas GCF_015237465.2_rCheMyd1.pri.v2 SAMN12612360 PRJNA561941 2021-07-15 reptiles
77 gyrfalcon Falco rusticolus GCF_015220075.1_bFalRus1.pri SAMN12629496 PRJNA561988 2020-11-03 birds
78 Hawaiian crow (2021 refseq VGP) Corvus hawaiiensis GCF_020740725.1_bCorHaw1.pri.cur SAMN22550278 PRJNA774314 2021-11-04 birds
79 honeycomb rockfish Sebastes umbrosus GCF_015220745.1_fSebUmb1.pri SAMN12629503 PRJNA562005 2020-11-03 fish
80 human (WGS:JACSEX01 2021 VGP) Homo sapiens GCA_016695395.2_mHomSap3.mat SAMN12568975 PRJNA562023 2021-01-19 mammals
81 hybrid cattle Bos indicus x Bos taurus GCA_003369685.2_UOA_Angus_1 SAMN08473802 PRJNA432857 2018-11-30 mammals
82 hybrid cattle Bos indicus x Bos taurus GCF_003369695.1_UOA_Brahman_1 SAMN08473802 PRJNA432857 2018-11-30 mammals
83 Indian glassy fish Parambassis ranga GCF_900634625.1_fParRan2.1 SAMEA4675621 PRJEB30257 2019-02-06 fish
84 Indo-Pacific tarpon Megalops cyprinoides GCF_013368585.1_fMegCyp1.pri SAMN12623619 PRJNA561967 2020-06-23 fish
85 jewelled blenny Salarias fasciatus GCF_902148845.1_fSalaFa1.1 SAMEA4966329 PRJEB33184 2019-07-03 fish
86 Kakapo Strigops habroptila GCF_004027225.2_bStrHab1.2.pri SAMN09948751 PRJNA489135 2020-03-04 birds
87 Korean giant-fin mudskipper (refseq) Periophthalmus magnuspinnatus GCF_009829125.1_fPerMag1.pri SAMN12629500 PRJNA561998 2020-01-03 fish
88 Kuhl's pipistrelle Pipistrellus kuhlii GCF_014108245.1_mPipKuh1.p SAMN14734388 PRJNA628567 2020-08-07 mammals
89 lance-tailed manakin Chiroxiphia lanceolata GCF_009829145.1_bChiLan1.pri SAMN12620979 PRJNA561943 2020-01-03 birds
90 lanner falcon (2022 VGP) Falco biarmicus GCA_023638135.1_bFalBia1.pri SAMN28688289 PRJNA842826 2022-06-02 birds
91 largescale foureyes (2020 VGP) Anableps anableps GCA_014839685.1_fAnaAna1.pri SAMN12623628 PRJNA561985 2020-10-02 fish
92 Lataste's viper (rVipLat1 2022 VGP) Vipera latastei GCA_024294585.1_rVipLat1.pri SAMN28408464 PRJNA838200 2022-07-20 reptiles
93 leatherback sea turtle (v4 2021 refseq G10K VGP) Dermochelys coriacea GCF_009764565.3_rDerCor1.pri.v4 SAMN12629498 PRJNA561993 2021-08-25 reptiles
94 lesser Egyptian jerboa (2021 VGP) Jaculus jaculus GCF_020740685.1_mJacJac1.mat.Y.cur SAMN20391724 PRJNA773797 2021-11-04 mammals
95 lesser kestrel (v2 2021 VGP) Falco naumanni GCF_017639655.2_bFalNau1.pat SAMN16870685 PRJNA702666 2021-03-30 birds
96 live sharksucker Echeneis naucrates GCF_900963305.1_fEcheNa1.1 SAMEA4966390 PRJEB31992 2019-04-11 fish
97 longspined bullhead (2021 VGP) Taurulus bubalis GCA_910589615.1_fTauBub2.1 SAMEA7522994 PRJEB45317 2021-07-07 fish
98 lumpfish (refseq) Cyclopterus lumpus GCF_009769545.1_fCycLum1.pri SAMN12629502 PRJNA562003 2019-12-23 fish
99 maguari stork (2021 VGP) Ciconia maguari GCA_017639555.1_bCicMag1.pri SAMN18353822 PRJNA715733 2021-03-30 birds
100 mallard (Pekin duck Z2 2020 Zhejiang U) Anas platyrhynchos GCF_015476345.1_ZJU1.0 SAMN15588841 PRJNA636121 2020-11-23 birds
101 meadow viper (2022 VGP) Vipera ursinii GCA_947247035.1_rVipUrs1.1 SAMEA12832258 PRJEB57183 2022-10-30 reptiles
102 Mexican gopher tortoise (WGS:JAMKFC01 2022 VGP) Gopherus flavomarginatus GCF_025201925.1_rGopFla2.mat.asm SAMN24199108 PRJNA794188 2022-09-15 reptiles
103 Mexican gopher tortoise (WGS:JAMKFD01 2022 VGP) Gopherus flavomarginatus GCA_025201965.1_rGopFla2.pat.asm SAMN24199108 PRJNA794189 2022-09-08 reptiles
104 milkfish Chanos chanos GCF_902362185.1_fChaCha1.1 SAMEA5159473 PRJEB33882 2019-08-14 fish
105 monito del monte (2021 VGP) Dromiciops gliroides GCF_019393635.1_mDroGli1.pri SAMN18857598 PRJNA728141 2021-08-03 mammals
106 mute swan (v2 2021) Cygnus olor GCF_009769625.2_bCygOlo1.pri.v2 SAMN12621369 PRJNA561960 2021-03-31 birds
107 New Caledonian crow Corvus moneduloides GCF_009650955.1_bCorMon1.pri SAMN12368441 PRJNA560983 2019-11-14 birds
108 New Zealand spotty (refseq) Notolabrus celidotus GCF_009762535.1_fNotCel1.pri SAMN12623201 PRJNA561956 2019-12-18 fish
109 northern pike Esox lucius GCF_011004845.1_fEsoLuc1.pri SAMN12623624 PRJNA561977 2020-03-05 fish
110 Norway rat BN7.2 Rattus norvegicus GCF_015227675.2_mRatBN7.2 SAMN16261960 PRJNA662791 2020-11-10 mammals
111 orbiculate cardinalfish Sphaeramia orbicularis GCF_902148855.1_fSphaOr1.1 SAMEA4966328 PRJEB33177 2019-07-03 fish
112 pale spear-nosed bat Phyllostomus discolor GCF_004126475.2_mPhyDis1.pri.v3 SAMN09948786 PRJNA489141 2020-05-12 mammals
113 Pallas's mastiff bat Molossus molossus GCF_014108415.1_mMolMol1.p SAMN14734448 PRJNA628574 2020-08-07 mammals
114 peladilla (galaxoid fish 2021 VGP) Aplochiton taeniatus GCA_017639675.1_fAplTae1.pri SAMN12623621 PRJNA561971 2021-03-30 fish
115 peregrine falcon (2022 VGP) Falco peregrinus GCA_023634155.1_bFalPer1.pri SAMN28688290 PRJNA842834 2022-06-02 birds
116 pinecone soldierfish Myripristis murdjan GCF_902150065.1_fMyrMur1.1 SAMEA4872133 PRJEB33188 2019-07-03 fish
117 platypus (v4 2020) Ornithorhynchus anatinus GCF_004115215.2_mOrnAna1.pri.v4 SAMN08537700 PRJNA489114 2020-11-06 mammals
118 plumbeous ibis (2021 VGP) Theristicus caerulescens GCA_020745775.1_bTheCae1.pri.cur SAMN22550094 PRJNA774297 2021-11-05 birds
119 prehistoric monster fish Thalassophryne amazonica GCF_902500255.1_fThaAma1.1 SAMEA104129913 PRJEB34606 2019-09-30 fish
120 razorbill Alca torda GCA_008658365.1_bAlcTor1_primary SAMN12292087 PRJNA554520 2019-10-10 birds
121 ring-tailed lemur (2021 VGP) Lemur catta GCF_020740605.2_mLemCat1.pri SAMN12621102 PRJNA561949 2021-11-04 mammals
122 red deer (2021 VGP) Cervus elaphus GCF_910594005.1_mCerEla1.1 SAMEA7523520 PRJEB45838 2021-07-07 mammals
123 red-bellied piranha Pygocentrus nattereri GCF_015220715.1_fPygNat1.pri SAMN12623623 PRJNA561975 2020-11-03 fish
124 red-crested turaco Tauraco erythrolophus GCA_009769465.1_bTauEry1.pri SAMN12621036 PRJNA561947 2019-12-19 birds
125 red-fronted tinkerbird Pogoniulus pusillus GCA_015220805.1_bPogPus1.pri SAMN15098508 PRJNA637953 2020-11-03 birds
126 red-legged seriema Cariama cristata GCA_009819825.1_bCarCri1.pri SAMN12614807 PRJNA561892 2019-12-31 birds
127 reedfish Erpetoichthys calabaricus GCF_900747795.1_fErpCal1.1 SAMEA104026374 PRJEB31579 2019-03-26 fish
128 rifleman (VGP 2021) Acanthisitta chloris GCA_016904835.1_bAcaChl1.pri SAMN16442762 PRJNA561954 2021-02-17 birds
129 river trout Salmo trutta GCF_901001165.1_fSalTru1.1 SAMEA994732 PRJEB32115 2019-06-02 fish
130 rock gunnel (2021 VGP) Pholis gunnellus GCA_910591455.2_fPhoGun1.2 SAMEA7522838 PRJEB45449 2021-11-18 fish
131 Saker falcon (2022 VGP) Falco cherrug GCA_023634085.1_bFalChe1.pri SAMN28688204 PRJNA842831 2022-06-02 birds
132 sand lizard Lacerta agilis GCF_009819535.1_rLacAgi1.pri SAMN12629509 PRJNA562018 2019-12-31 reptiles
133 sea lamprey Petromyzon marinus GCF_010993605.1_kPetMar1.pri SAMN12629506 PRJNA562011 2020-02-24 otherChordates
134 Siamese fighting fish (2020) Betta splendens GCF_900634795.3_fBetSpl5.3 SAMEA104381735 PRJEB30365 2020-08-25 fish
135 smalltooth sawfish Pristis pectinata GCA_009764475.1_sPriPec2.pri SAMN12629505 PRJNA562009 2019-12-19 sharks
136 South Island takahe (VGP primary 2021) Porphyrio hochstetteri GCA_020800305.1_bPorHoc1.mat.Z.cur SAMN22550412 PRJNA774331 2021-11-08 birds
137 southern bluefin tuna (2021 VGP) Thunnus maccoyii GCF_910596095.1_fThuMac1.1 SAMEA8654747 PRJEB46021 2021-07-07 fish
138 southern grasshopper mouse Onychomys torridus GCF_903995425.1_mOncTor1.1 SAMEA104026389 PRJEB39770 2020-08-21 mammals
139 southern tamandua (2022 VGP) Tamandua tetradactyla GCA_023851605.1_mTamTet1.pri SAMN12612337 PRJNA561939 2022-06-22 mammals
140 southern two-toed sloth Choloepus didactylus GCF_015220235.1_mChoDid1.pri SAMN12612024 PRJNA561937 2020-11-03 mammals
141 specked wood butterfly Pararge aegeria GCF_905163445.1_ilParAegt1.1 SAMEA7532732 PRJEB42039 2021-01-28 insects
142 stone loach (2022 VGP) Barbatula barbatula GCA_947034865.1_fBarBar1.1 SAMEA11296540 PRJEB56420 2022-10-07 fish
143 Suruca trogon (2021 VGP) Trogon surrucura GCA_020746105.1_bTroSur1.pri.cur SAMN22550082 PRJNA774295 2021-11-05 birds
144 Swainson's thrush (v2 2020 VGP) Catharus ustulatus GCF_009819885.2_bCatUst1.pri.v2 SAMN12618602 PRJNA561933 2020-12-22 birds
145 thorny skate (v2 2020) Amblyraja radiata GCF_010909765.2_sAmbRad1.1.pri SAMN09948523 PRJNA591369 2020-02-21 sharks
146 tiny Cayenne caecilian Microcaecilia unicolor GCF_901765095.1_aMicUni1.1 SAMEA104387962 PRJEB32737 2019-06-22 amphibians
147 torafugu Takifugu rubripes GCF_901000725.2_fTakRub1.2 SAMEA104384834 PRJEB31988 2019-06-05 fish
148 tufted duck Aythya fuligula GCF_009819795.1_bAytFul2.pri SAMN12621346 PRJNA561952 2019-12-31 birds
149 two-lined caecilian Rhinatrema bivittatum GCF_901001135.1_aRhiBiv1.1 SAMEA104387956 PRJEB32111 2019-06-02 amphibians
150 vaquita Phocoena sinus GCF_008692025.1_mPhoSin1.pri SAMN12325353 PRJNA557831 2019-09-26 mammals
151 warty frogfish (2020 VGP) Antennarius maculatus GCA_013358685.1_fAntMac1.pri SAMN12623626 PRJNA561983 2020-06-18 fish
152 yellowfin seabream Acanthopagrus latus GCF_904848185.1_fAcaLat1.1 SAMN16236878 PRJEB40700 2020-10-12 fish
153 Western terrestrial garter snake Thamnophis elegans GCF_009769535.1_rThaEle1.pri SAMN12629499 PRJNA561996 2019-12-23 reptiles
154 whiskered treeswift (2021 VGP) Hemiprocne comata GCA_020745705.1_bHemCom1.pri.cur SAMN22588383 PRJNA774831 2021-11-05 birds
155 white leghorn X broiler chicken (leghorn haplotype v2 VGP 2021) Gallus gallus GCF_016700215.2_bGalGal1.pat.whiteleghornlayer.GRCg7w SAMN15960293 PRJNA660758 2021-10-01 birds
156 yellow-throated sandgrouse Pterocles gutturalis GCA_009769525.1_bPteGut1.pri SAMN12623217 PRJNA561958 2019-12-23 birds
157 yellowfin tuna (2021 VGP) Thunnus albacares GCF_914725855.1_fThuAlb1.1 SAMEA8654749 PRJEB47267 2021-09-16 fish
158 zebra finch (refseq 2021 Blue55 female) Taeniopygia guttata GCF_003957565.2_bTaeGut1.4.pri SAMN02981239 PRJNA489098 2021-05-04 birds
159 zebrafish (WGS:CAHPTA01 2020 VGP) Danio rerio GCA_903684865.1_fDreABH1.1 SAMEA4760846 PRJEB38589 2020-06-28 fish
160 zebrafish (WGS:CAHPTB02 2020 VGP) Danio rerio GCA_903684855.2_fDreTuH1.2 SAMEA4760849 PRJEB38588 2020-07-31 fish
161 zebrafish (WGS:CALUEM01 2022 VGP) Danio rerio GCA_944039275.1_fDanRer4.1 SAMEA14088276 PRJEB53407 2022-06-24 fish
162 zig-zag eel Mastacembelus armatus GCF_900324485.2_fMasArm1.2 SAMEA104026378 PRJEB25769 2019-03-16 fish

Alternate sets of VGP assembliesNCBI Refseq
Index pages:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies
Assembly statistics:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies
Track statistics:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies