VGP - Vertebrate Genomes Project assembly hubs, assembly statistics

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This assembly hub contains assemblies released by the Vertebrate Genomes Project. (set of primary assemblies)

See also: hub access, track statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser		 scientific name
and data download		 NCBI assembly sequence
count		genome size
nucleotides		 gap
count		unknown bases
(gap size sum)		masking
percent
1 Abyssinian ground-hornbill (primary hap 2019) Bucorvus abyssinicus GCA_009769605.1_bBucAby1.pri 112 1,132,597,561 204 8,074,542 19.24
2 Acadian redfish (fSebFas1 primary hap 2024) Sebastes fasciatus GCA_043250625.1_fSebFas1.pri 203 833,835,073 471 84,200 37.97
3 adder (hap1 2024) Vipera berus GCA_964194415.1_rVipBer3.hap1.1 479 1,695,017,208 1,057 211,400 50.49
4 Aeolian wall lizard (La Canna islet primary hap 2022 refseq) Podarcis raffonei GCF_027172205.1_rPodRaf1.pri 27 1,513,131,503 30 23,116 38.30
5 African grass rat (v2 paternal X 2024 genbank) Arvicanthis niloticus GCA_011762505.2_mArvNil1.pat.X 1,596 2,496,777,707 1,624 20,289,527 42.62
6 African hunting dog (LycPic1hap2 2024) Lycaon pictus GCA_040955705.1_LycPic1.final.hap2 76 2,384,012,108 91 9,100 33.73
7 African ostrich (bStrCam1hap1 2024) Struthio camelus GCF_040807025.1_bStrCam1.hap1 262 1,452,018,929 116 23,200 24.25
8 African savanna elephant (hap2 2023 refseq) Loxodonta africana GCF_030014295.1_mLoxAfr1.hap2 879 3,540,876,381 231 3,688,568 49.48
9 Alvarez's mastiff bat (A012 2023) Molossus alvarezi GCA_031001765.1_BBF_mMolAlv_v1 187 2,395,140,990 1,182 236,400 38.99
10 Alvarez's mastiff bat (hap1 2024) Molossus alvarezi GCA_037157525.1_mMolAlv2.hap1 326 2,478,684,717 80 12,700 40.83
11 American alligator (2023 refseq) Alligator mississippiensis GCF_030867095.1_rAllMis1 195 2,346,795,873 161 16,453,847 42.90
12 American flamingo (primary hap 2019) Phoenicopterus ruber ruber GCA_009819775.1_bPhoRub2.pri 90 1,246,226,932 280 8,602,116 20.94
13 American mink (hap1 2024) Neogale vison GCA_964106545.1_mNeoVis2.hap1.1 435 2,697,147,479 2,957 591,400 38.00
14 American pika (hap1 2023) Ochotona princeps GCF_030435755.1_mOchPri1.hap1 5,864 2,555,444,530 432 86,229 43.65
15 American shad (primary hap 2021) Alosa sapidissima GCF_018492685.1_fAloSap1.pri 74 903,581,644 1,639 4,995,812 39.49
16 amphioxus (hap2 2024 genbank) Branchiostoma lanceolatum GCA_035083965.1_klBraLanc5.hap2 34 458,287,516 103 15,500 27.49
17 Andian cavefish (hap1 2023 refseq) Trichomycterus rosablanca GCF_030014385.1_fTriRos1.hap1 349 1,045,025,885 198 39,600 49.04
18 Anna's hummingbird (BGI_N300 2019 refseq) Calypte anna GCF_003957555.1_bCalAnn1_v1.p 159 1,059,687,259 429 16,096,788 20.87
19 Antarctic jonasfish (primary hap 2024) Notolepis coatsorum GCA_963971535.1_fNotCoa1.1 5,983 3,427,809,033 15,113 3,020,567 68.42
20 Antarctic lanternfish (primary hap 2023) Electrona antarctica GCA_951216825.1_fEleAnt2.1 1,901 1,427,445,741 3,179 635,800 52.88
21 Arabian camel (paternal hap 2024 refseq) Camelus dromedarius GCF_036321535.1_mCamDro1.pat 171 2,306,603,094 195 39,000 33.51
22 Arctic char (CBP00131 primary hap 2024) Salvelinus alpinus oquassa GCA_036784965.1_fSalAlp2_p1.0 1,169 2,129,031,653 3,235 647,000 58.15
23 Aristotle's catfish (primary hap 2022) Silurus aristotelis GCA_946808225.1_fSilAri3.1 241 800,118,513 795 159,000 42.15
24 Asian bonytongue (2019) Scleropages formosus GCF_900964775.1_fSclFor1.1 72 784,563,014 145 41,360 26.53
25 Asiatic elephant (mEleMax1 primary hap 2022) Elephas maximus indicus GCF_024166365.1_mEleMax1_primary_haplotype 64 3,401,247,148 126 3,333,681 48.67
26 Asiatic tapir (hap2 2023) Tapirus indicus GCA_031878705.1_mTapInd1.hap2 193 2,477,445,429 92 18,400 38.23
27 Atlantic bluefin tuna (primary hap 2024 refseq) Thunnus thynnus GCF_963924715.1_fThuThy2.1 119 799,047,066 468 93,600 33.12
28 Atlantic cod (2019) Gadus morhua GCF_902167405.1_gadMor3.0 227 669,966,409 1,216 23,573,743 33.47
29 Atlantic hagfish (primary hap 2024) Myxine glutinosa GCA_964187855.1_kmMyxGlut1.1 4,004 3,057,523,704 4,412 882,096 74.33
30 Atlantic halibut (2019 refseq) Hippoglossus hippoglossus GCF_009819705.1_fHipHip1.pri 57 596,792,615 290 3,413,390 24.17
31 Atlantic horse mackerel (primary hap 2021) Trachurus trachurus GCA_905171665.2_fTraTra1.2 153 801,243,942 222 29,162 32.85
32 Atlantic mackerel (primary hap 2023 refseq) Scomber scombrus GCF_963691925.1_fScoSco1.1 665 764,141,294 1,489 297,822 29.96
33 Atlantic stingray (hap1 2023 refseq) Hypanus sabinus GCF_030144855.1_sHypSab1.hap1 2,989 4,044,869,043 1,648 329,600 51.80
34 Atlantic white-sided dolphin (mLagAcu1.hap1.1 2024) Lagenorhynchus acutus GCA_964270905.1_mLagAcu1.hap1.1 899 2,676,209,414 1,034 206,800 41.93
35 Australian echidna (mTacAcu1 primary hap 2020) Tachyglossus aculeatus GCF_015852505.1_mTacAcu1.pri 310 2,213,004,214 524 30,817,383 55.70
36 axolotl (Mex_15411 2024) Ambystoma mexicanum GCF_040938575.1_UKY_AmexF1_1 221 29,117,864,639 2,095 417,300 67.13
37 ballan wrasse (primary hap 2024 refseq) Labrus bergylta GCF_963930695.1_fLabBer1.1 131 720,210,020 815 163,000 30.38
38 band-tailed pigeon (hap2 2024 refseq) Patagioenas fasciata GCF_036971685.1_bPatFas1.hap2 452 1,410,041,145 219 8,369,264 31.76
39 banded archerfish (primary hap 2021 refseq) Toxotes jaculatrix GCF_017976425.1_fToxJac2.pri 96 621,503,431 98 1,137,472 28.10
40 banded killifish (hap1 2024) Fundulus diaphanus GCA_037039145.1_fFunDia1.hap1 331 1,351,828,608 293 3,461,740 50.48
41 barbel (primary hap 2022) Barbus barbus GCA_936440315.1_fBarBab1.1 92 1,584,929,904 108 21,600 52.50
42 barn swallow (v3 primary hap 2021 refseq) Hirundo rustica GCF_015227805.2_bHirRus1.pri.v3 617 1,105,955,550 1,102 25,534,411 21.06
43 basking shark (sCetMax3.hap1.1 2024) Cetorhinus maximus GCA_964194155.1_sCetMax3.hap1.1 5,088 3,993,866,540 2,778 555,635 65.99
44 great fruit-eating bat (hap1 2024) Artibeus intermedius GCA_038363145.1_mArtInt1.hap1 419 2,293,600,955 81 12,100 34.66
45 Bellinger river turtle (BRST_UC0152H_USYD 2024) Myuchelys georgesi GCA_040894355.1_rMyuGeo1.pri.20230808 129 1,980,051,792 57 11,400 26.49
46 big brown bat (TK198812 2023) Eptesicus fuscus GCF_027574615.1_DD_ASM_mEF_20220401 48 2,008,057,866 75 28,557 37.06
47 bilby (mMagLag1 2024) Macrotis lagotis GCA_037893015.1_bilby.v1.9.chrom.fasta 609 3,655,732,635 4,431 12,523,912 43.71
48 bird A.albertisi (hap1 2024) Aegotheles albertisi GCA_039906565.1_bAegAlb1.hap1 592 1,167,497,019 439 87,800 21.86
49 bird E.chinensis (hap2 2024) Excalfactoria chinensis GCA_039878825.1_bCotChi1.hap2 191 966,847,183 330 63,200 20.52
50 black and rufous elephant shrew (mRhyPet1hap1 2024) Rhynchocyon petersi GCA_043290085.1_mRhyPet1.hap1 469 5,620,370,870 770 153,831 14.57
51 black goby (primary hap 2023) Gobius niger GCA_951799975.1_fGobNig1.1 298 870,572,126 636 127,200 40.54
52 black rhinoceros (primary hap 2021 refseq) Diceros bicornis minor GCF_020826845.1_mDicBic1.mat.cur 1,076 3,005,535,620 215 1,368,861 40.15
53 black-capped chickadee (hap1 2023) Poecile atricapillus GCF_030490865.1_bPoeAtr1.hap1 307 1,251,133,642 404 958,949 24.42
54 black-headed gull (primary hap 2024 refseq) Chroicocephalus ridibundus GCF_963924245.1_bChrRid1.1 728 1,417,554,307 462 92,400 31.33
55 black-legged kittiwake (bRisTri1 2023 refseq) Rissa tridactyla GCF_028500815.1_bRisTri1.patW.cur.20221130 716 1,353,621,101 283 786,373 26.72
56 blackbelly eelpout (fLycPai1 haplotype 2 2023) Lycodopsis pacificus GCA_028022725.1_fLycPai1.hap2 109 646,369,862 366 73,200 29.94
57 blackcap (primary hap 2019 refseq) Sylvia atricapilla GCF_009819655.1_bSylAtr1.pri 190 1,066,804,524 413 11,925,354 19.80
58 blacktail shiner (hap2 2024) Cyprinella venusta GCA_038024135.1_fCypVen1.hap2 413 928,717,837 720 134,500 47.57
59 Blainville's beaked whale (primary hap 2022 refseq) Mesoplodon densirostris GCF_025265405.1_mMesDen1_primary_haplotype 74 2,683,391,478 97 700,303 41.79
60 blonde ray (primary hap 2023) Raja brachyura GCA_963514005.1_sRajBra1.1 1,647 2,700,467,673 2,269 453,800 66.30
61 blue whale (JJ_BM4_2016_0621 v3 primary hap 2020) Balaenoptera musculus GCF_009873245.2_mBalMus1.pri.v3 106 2,374,868,943 886 25,937,142 43.76
62 blue whiting (primary hap 2024) Micromesistius poutassou GCA_964030765.1_fMicPou1.1 3,832 520,636,573 3,055 611,000 35.17
63 blue-and-yellow macaw (hap1 2023) Ara ararauna GCA_028858755.1_bAraAra1.hap1 246 1,224,360,198 107 988,129 24.87
64 blunt-snouted clingfish (v2 2020 genbank) Gouania willdenowi GCA_900634775.2_fGouWil2.2 442 937,169,869 1,160 14,353,515 42.93
65 Boeseman's rainbowfish (primary hap 2021) Melanotaenia boesemani GCF_017639745.1_fMelBoe1.pri 93 865,592,457 440 3,217,901 29.18
66 Bolin's lanternfish (primary hap 2024) Protomyctophum bolini GCA_963924005.1_fProBol1.1 951 1,148,224,649 1,785 357,000 47.04
67 bonti-bonti (primary hap 2022) Telmatherina bonti GCA_933228915.1_fTelBon1.1 146 986,039,709 1,329 265,800 40.16
68 Bornean orangutan (v2 AG05252 primary hap 2024 refseq) Pongo pygmaeus GCF_028885625.2_NHGRI_mPonPyg2-v2.0_pri 26 3,220,951,552 8 8,000,000 54.51
69 Botta's pocket gopher (hap1 2023) Thomomys bottae GCA_031878675.1_mThoBot2.hap1 630 2,025,650,949 775 154,825 40.80
70 boutu (hap1 2024) Inia geoffrensis GCA_036417435.1_mIniGeo1.hap1 903 2,749,362,370 284 56,265 42.66
71 bowfin (hap1 2024 refseq) Amia calva GCF_036373705.1_fAmiCal2.hap1 389 989,103,751 97 19,400 37.74
72 Brauer's lanternfish (primary hap 2023) Gymnoscopelus braueri GCA_963280865.1_fGymBra2.1 676 1,367,984,568 2,704 540,800 49.78
73 Brazilian free-tailed bat (primary hap 2023) Tadarida brasiliensis GCA_030848825.1_DD_mTadBra1_pri 148 2,283,188,801 20 5,952 36.16
74 Brazilian merganser (hap1 2024) Mergus octosetaceus GCA_036873955.1_bMerOct1.hap1 569 1,245,791,205 327 56,959 28.52
75 Brown anole (maternal hap 2024 refseq) Anolis sagrei GCF_037176765.1_rAnoSag1.mat 29 1,950,830,970 191 38,200 46.73
76 brown argus butterfly (refseq 2021) Aricia agestis GCF_905147365.1_ilAriAges1.1 25 435,265,205 4 734 48.47
77 brown big-eared bat (primary hap 2023) Plecotus auritus GCA_963455305.1_mPleAur1.1 65 2,163,221,563 1,237 247,441 39.67
78 budgerigar (maternal Z 2020 refseq) Melopsittacus undulatus GCF_012275295.1_bMelUnd1.mat.Z 864 1,171,617,451 284 3,236,129 22.13
79 butterfish (primary hap 2021) Scatophagus argus GCF_020382885.2_fScaArg1.pri 48 570,802,272 77 1,711,559 21.27
80 butterfly blenny (primary hap 2023) Blennius ocellaris GCA_963422515.1_fBleOce1.1 525 728,745,255 1,625 325,000 32.58
81 California sea lion (v2 primary hap 2020) Zalophus californianus GCF_009762305.2_mZalCal1.pri.v2 47 2,409,685,272 185 18,537,776 43.36
82 Canada lynx (LIC74 v2 primary hap 2020) Lynx canadensis GCF_007474595.2_mLynCan4.pri.v2 54 2,407,810,255 842 2,779,346 43.72
83 Caribbean electric ray (hap1 2024 refseq) Narcine bancroftii GCF_036971445.1_sNarBan1.hap1 595 3,328,432,768 1,443 277,765 54.80
84 Caribbean electric ray (hap2 2024) Narcine bancroftii GCA_036971175.1_sNarBan1.hap2 445 3,110,263,114 1,507 286,941 52.51
85 carmine bee-eater (primary hap 2019) Merops nubicus GCA_009819595.1_bMerNub1.pri 109 1,149,356,202 269 6,055,062 21.59
86 chaffinch (primary hap 2023) Fringilla coelebs GCA_963513975.1_bFriCoe1.1 460 1,209,243,761 573 114,600 28.43
87 channel bull blenny (2019 refseq) Cottoperca gobio GCF_900634415.1_fCotGob3.1 322 609,391,784 445 2,553,975 28.72
88 chevron butterflyfish (hap1 2024) Chaetodon trifascialis GCA_039877785.1_fChaTrf1.hap1 37 662,505,520 49 9,600 23.31
89 chimpanzee (v2 AG18354 primary hap 2024 refseq) Pan troglodytes GCF_028858775.2_NHGRI_mPanTro3-v2.0_pri 26 3,177,756,316 5 5,000,000 49.97
90 Chinese pangolin (hap1 2023) Manis pentadactyla GCF_030020395.1_mManPen7.hap1 661 2,840,164,579 383 6,563,020 39.02
91 chub mackerel (primary hap 2022 refseq) Scomber japonicus GCF_027409825.1_fScoJap1.pri 360 828,681,152 1,572 647,100 32.44
92 climbing perch (v1.3 2021) Anabas testudineus GCA_900324465.3_fAnaTes1.3 51 555,658,509 266 3,606,496 21.33
93 clouded leopard (mNeoNeb1 primary hap 2023 refseq) Neofelis nebulosa GCF_028018385.1_mNeoNeb1.pri 33 2,468,345,093 181 1,363,852 34.87
94 coelacanth (fLatCha1 primary hap 2024) Latimeria chalumnae GCF_037176945.1_fLatCha1.pri 197 2,947,609,019 154 30,632 54.45
95 common blue-tongued skink (hap2 2024) Tiliqua scincoides GCA_035046505.1_rTilSci1.hap2 350 1,623,332,312 372 74,400 37.07
96 common bottlenose dolphin (maternal Y refseq 2020) Tursiops truncatus GCF_011762595.1_mTurTru1.mat.Y 362 2,378,522,213 674 6,222,516 46.09
97 common bream (primary hap 2024) Abramis brama GCA_963993115.1_fAbrBra2.1 208 1,108,218,292 685 137,000 48.57
98 common brushtail (refseq 2020) Trichosurus vulpecula GCF_011100635.1_mTriVul1.pri 212 3,359,347,707 1,796 18,696,463 40.57
99 common buzzard (bButBut1.hap1.1 2024) Buteo buteo GCA_964188355.1_bButBut1.hap1.1 544 1,303,700,921 471 94,200 23.96
100 common cuckoo (bCucCan1 primary hap 2021 refseq) Cuculus canorus GCF_017976375.1_bCucCan1.pri 150 1,180,136,575 296 4,922,315 21.81
101 common dab (primary hap 2023) Limanda limanda GCF_963576545.1_fLimLim1.1 338 717,580,706 275 55,000 35.04
102 common goldeneye (primary hap 2024) Bucephala clangula GCA_964059595.1_bBucCla1.1 538 1,190,938,797 454 90,625 25.01
103 common lizard Z.vivipara (primary hap 2023) Zootoca vivipara GCF_963506605.1_rZooViv1.1 48 1,440,239,386 683 136,600 45.64
104 common moorhen (bGalChl1.hap1.1 2024) Gallinula chloropus GCA_964237585.1_bGalChl1.hap1.1 818 1,282,411,533 603 120,600 25.71
105 common myna (bArcTri1 primary hap 2023) Acridotheres tristis GCA_027559615.1_bAcrTri1.pri 455 1,193,419,045 435 2,422,523 28.14
106 common newt (primary hap 2024) Lissotriton vulgaris GCA_964263255.1_aLisVul1.1 15,265 24,226,223,864 4,030 805,825 1.87
107 common pipistrelle (2020) Pipistrellus pipistrellus GCA_903992545.1_mPipPip1.1 323 1,763,439,233 1,546 469,367 34.71
108 common pochard (bAytFer1.hap1.1 2024) Aythya ferina GCA_964211825.1_bAytFer1.hap1.1 862 1,252,319,576 474 94,800 27.88
109 common sole (primary hap 2023 refseq) Solea solea GCF_958295425.1_fSolSol10.1 242 643,757,955 373 74,600 32.91
110 common spadefoot toad (primary hap 2024 refseq) Pelobates fuscus GCF_036172605.1_aPelFus1.pri 159 3,606,456,729 349 69,626 51.45
111 common swift (primary hap 2021 refseq) Apus apus GCF_020740795.1_bApuApu2.pri.cur 110 1,100,378,261 256 1,747,529 21.21
112 common tern (primary hap 2019) Sterna hirundo GCA_009819605.1_bSteHir1.pri 123 1,229,972,541 205 10,364,610 21.00
113 common toad (primary hap 2021) Bufo bufo GCF_905171765.1_aBufBuf1.1 1,306 5,044,744,194 4,199 9,878,258 62.71
114 common vampire bat (v2 HL8 primary hap 2022) Desmodus rotundus GCA_022682495.2_HLdesRot8A.1 573 2,119,704,833 615 257,063 32.64
115 common wall lizard (hap1 2024) Podarcis muralis GCA_964188315.1_rPodMur119.hap1.1 185 1,522,641,370 827 165,400 38.70
116 common whitefish (fCorLav1.hap1.1 2024) Coregonus lavaretus GCA_964263955.1_fCorLav1.hap1.1 11,150 2,842,862,595 5,995 1,199,000 61.61
117 common yellowthroat (primary hap 2019) Geothlypis trichas GCA_009764595.1_bGeoTri1.pri 278 1,078,128,490 1,479 13,697,790 20.48
118 convict blenny (primary hap 2021) Pholidichthys leucotaenia GCA_020510985.1_fPhoLeu1.pri 512 6,032,307,556 2,580 52,780,824 48.95
119 copperband butterflyfish (primary hap 2021) Chelmon rostratus GCF_017976325.1_fCheRos1.pri 29 644,208,431 60 11,380 21.59
120 corkwing wrasse (primary hap 2022) Symphodus melops GCA_947650265.1_fSymMel2.1 395 636,368,453 1,379 275,800 28.78
121 corroboree frog (hap2 2023 refseq) Pseudophryne corroboree GCF_028390025.1_aPseCor3.hap2 3,127 8,872,758,793 2,699 21,212,457 74.73
122 Cory's shearwater (bCalBor7.hap1.1 2024) Calonectris borealis GCA_964195595.1_bCalBor7.hap1.1 355 1,366,205,003 525 105,015 24.91
123 Cretan wall lizard (primary hap 2023) Podarcis cretensis GCA_951804945.1_rPodCre2.1 51 1,507,627,055 47 9,400 38.66
124 crucian carp (primary hap 2023 refseq) Carassius carassius GCF_963082965.1_fCarCar2.1 277 1,684,296,438 832 166,400 45.86
125 cuckoo roller (hap2 2023) Leptosomus discolor GCA_034619465.1_bLepDis1.hap2 278 1,332,047,658 271 54,200 25.12
126 cuckoo wrasse (primary hap 2023) Labrus mixtus GCF_963584025.1_fLabMix1.1 324 740,563,171 570 114,014 33.86
127 cunner (primary hap 2021) Tautogolabrus adspersus GCA_020745685.1_fTauAds1.pri.cur 64 723,582,185 283 4,256,220 30.38
128 Dalmatian pelican (primary hap 2023) Pelecanus crispus GCA_030463565.1_bPelCri1.pri 311 1,314,587,946 390 78,000 24.65
129 dark-edged splitfin (DD_20200921_A 2022 refseq) Girardinichthys multiradiatus GCF_021462225.1_DD_fGirMul_XY1 72 1,150,004,004 409 6,172,100 38.37
130 Daubenton's bat (primary hap 2023 refseq) Myotis daubentonii GCF_963259705.1_mMyoDau2.1 121 2,127,807,131 1,099 219,800 38.85
131 denticle herring (v2 2020) Denticeps clupeoides GCA_900700375.2_fDenClu1.2 461 567,417,970 464 4,648,387 28.83
132 diamondback terrapin (hap1 2023 refseq) Malaclemys terrapin pileata GCF_027887155.1_rMalTer1.hap1 76 2,211,221,380 141 1,749,567 46.30
133 dog (German shepard Mischka 2020) Canis lupus familiaris GCF_011100685.1_UU_Cfam_GSD_1.0 2,197 2,481,983,352 585 58,500 43.95
134 Domestic goose (bAnsAns1.hap1.1 2024) Anser anser GCA_964211835.1_bAnsAns1.hap1.1 819 1,313,455,045 930 186,000 28.50
135 dorado (hap2 2023) Salminus brasiliensis GCA_030463535.1_fSalBra1.hap2 104 1,066,501,646 726 9,072,217 36.78
136 downy woodpecker (primary hap 2020) Dryobates pubescens GCF_014839835.1_bDryPub1.pri 180 1,187,939,694 187 4,003,130 32.06
137 dugong (hap1 mDugDug1 2023) Dugong dugon GCA_030035585.1_mDugDug1.hap1 198 3,158,488,110 96 19,200 47.43
138 East African grey crowned-crane (primary hap 2020) Balearica regulorum gibbericeps GCA_011004875.1_bBalReg1.pri 105 1,221,051,782 144 4,796,037 21.20
139 Eastern black-eared wheatear (GR-GAL-2019-014 2023) Oenanthe melanoleuca GCF_029582105.1_OMel1.0 587 1,036,256,795 582 58,200 20.82
140 eastern cottontail (primary hap 2023) Sylvilagus floridanus GCA_949820135.1_mSylFlo1.10 99 2,848,420,111 316 31,600 44.09
141 eastern happy (v3 2021) Astatotilapia calliptera GCA_900246225.5_fAstCal1.3 249 880,445,568 490 1,186,663 35.92
142 eastern musk turtle (primary hap 2023) Sternotherus odoratus GCA_032164245.1_rSteOdo2_p1.0 218 1,759,411,633 553 110,600 30.45
143 eastern narrow-mouthed toad (primary haplotype 2023) Gastrophryne carolinensis GCA_027917425.1_aGasCar1.pri 1,002 4,336,248,441 1,745 349,000 60.57
144 Egyptian rousette (v1 2020 refseq) Rousettus aegyptiacus GCF_014176215.1_mRouAeg1.p 29 1,893,602,072 242 26,674,495 32.62
145 electric eel (fEleEle1 primary hap 2020) Electrophorus electricus GCF_013358815.1_fEleEle1.pri 89 589,358,956 227 10,599,768 24.89
146 emu (hap1 2024) Dromaius novaehollandiae GCF_036370855.1_bDroNov1.hap1 271 1,468,706,110 129 25,800 24.07
147 emu (v2 ZJU1.0 2023) Dromaius novaehollandiae GCA_016128335.2_ZJU2.0 767 1,247,435,561 539 72,443 19.18
148 epaulette shark (primary hap 2021 refseq) Hemiscyllium ocellatum GCF_020745735.1_sHemOce1.pat.X.cur. 1,962 3,983,466,396 3,716 77,564,682 62.70
149 ermine (2020) Mustela erminea GCF_009829155.1_mMusErm1.Pri 94 2,445,217,270 199 21,483,976 41.13
150 Eurasian badger (v3.1 2021) Meles meles GCF_922984935.1_mMelMel3.1_paternal_haplotype 538 2,738,694,446 101 23,800 38.09
151 Eurasian collared-dove (bStrDea1.hap1.1 2024) Streptopelia decaocto GCA_964273445.1_bStrDea1.hap1.1 2,451 1,290,957,608 696 139,200 30.01
152 Eurasian crane (hap1 2024) Grus grus GCA_964106855.1_bGruGru1.hap1.1 754 1,352,282,554 593 118,600 26.80
153 Eurasian curlew (hap1 2024) Numenius arquata GCA_964106895.1_bNumArq3.hap1.1 1,819 1,348,876,333 785 157,000 28.37
154 Eurasian minnow (primary hap 2023) Phoxinus phoxinus GCA_949152265.1_fPhoPho1.1 125 950,498,056 881 176,200 44.44
155 Eurasian nightjar (primary hap 2021) Caprimulgus europaeus GCA_907165065.1_bCapEur3.1 121 1,177,791,212 153 25,835 22.20
156 Eurasian red squirrel (v1.2 2020) Sciurus vulgaris GCA_902686455.2_mSciVul1.2 639 2,878,607,543 1,177 163,358,994 33.75
157 Eurasian river otter (2020) Lutra lutra GCF_902655055.1_mLutLut1.2 44 2,438,458,878 185 90,271 34.39
158 Eurasian water vole (v2 2021) Arvicola amphibius GCF_903992535.2_mArvAmp1.2 215 2,297,766,297 873 6,026,960 32.43
159 European chub (primary hap 2023) Squalius cephalus GCA_949319135.1_fSquCep2.1 106 1,101,930,522 588 117,600 49.02
160 European common frog (2021) Rana temporaria GCF_905171775.1_aRanTem1.1 554 4,111,422,596 1,860 26,194,034 55.46
161 European conger (primary hap 2023 refseq) Conger conger GCF_963514075.1_fConCon1.1 380 1,136,402,888 1,009 201,800 35.55
162 European eel (primary hap 2020 refseq) Anguilla anguilla GCF_013347855.1_fAngAng1.pri 54 979,045,926 640 3,868,499 27.45
163 European flounder (primary hap 2023 refseq) Platichthys flesus GCF_949316205.1_fPlaFle2.1 108 597,120,941 482 96,400 27.16
164 European golden plover (primary hap 2021) Pluvialis apricaria GCA_017639485.1_bPluApr1.pri 107 1,247,767,512 268 12,294,737 21.20
165 European harvest mouse (primary hap 2024) Micromys minutus GCA_963924665.1_mMicMin1.1 894 2,651,787,409 2,020 404,000 42.52
166 European mink (primary hap 2023 refseq) Mustela lutreola GCF_030435805.1_mMusLut2.pri 25 2,586,268,927 39 7,800 36.60
167 European mole (hap1 2024) Talpa europaea GCA_964194135.1_mTalEur1.hap1.1 464 2,061,000,977 1,056 211,200 33.70
168 European pine marten (primary hap 2023) Martes martes GCA_963455335.1_mMarMar1.1 477 2,484,650,161 2,250 450,000 34.75
169 European plaice (primary hap 2022 refseq) Pleuronectes platessa GCF_947347685.1_fPlePla1.1 355 687,388,084 1,072 214,400 33.59
170 European pond turtle (hap1 2023 refseq) Emys orbicularis GCF_028017835.1_rEmyOrb1.hap1 106 2,309,740,635 148 3,324,230 35.43
171 European river lamprey (primary hap 2024) Lampetra fluviatilis GCA_964198595.1_kcLamFluv1.1 1,497 1,042,475,189 1,795 359,000 50.86
172 European robin (primary hap 2021) Erithacus rubecula GCA_903797595.2_bEriRub2.2 1,119 1,086,738,418 990 287,644 21.47
173 European shag (primary hap 2023) Phalacrocorax aristotelis GCA_949628215.1_bGulAri2.1 353 1,279,134,750 222 44,217 22.81
174 European shrew (primary hap 2023) Sorex araneus GCF_027595985.1_mSorAra2.pri 65 2,405,993,548 1,427 12,943,964 41.75
175 European smelt (primary hap 2023 refseq) Osmerus eperlanus GCF_963692335.1_fOsmEpe2.1 1,007 508,721,272 2,462 492,400 35.92
176 European snow vole (primary hap 2023 refseq) Chionomys nivalis GCF_950005125.1_mChiNiv1.1 160 2,393,390,621 197 39,400 44.15
177 European sprat (primary hap 2023) Sprattus sprattus GCA_963457725.1_fSprSpr1.1 387 840,332,306 1,501 300,226 35.52
178 European starfish (2020) Asterias rubens GCF_902459465.1_eAstRub1.3 150 417,601,740 471 148,140 37.45
179 European suslik (primary hap 2024) Spermophilus citellus GCA_964194105.1_mSpeCit3.1 498 3,090,049,053 1,436 287,200 41.68
180 European turtle dove (v1.2 2021) Streptopelia turtur GCA_901699155.2_bStrTur1.2 311 1,178,816,852 940 3,880,574 21.07
181 European woodmouse (2022 refseq) Apodemus sylvaticus GCF_947179515.1_mApoSyl1.1 497 2,889,785,202 1,129 225,617 40.60
182 false killer whale (hap1 2024 refseq) Pseudorca crassidens GCF_039906515.1_mPseCra1.hap1 438 2,674,592,094 123 2,797,992 41.86
183 Filfola wall lizard (rPodFil1.hap1.1 2024) Podarcis filfolensis GCA_964270895.1_rPodFil1.hap1.1 349 1,506,966,124 872 174,400 37.95
184 fire-bellied toad (primary hap 2023 refseq) Bombina bombina GCF_027579735.1_aBomBom1.pri 2,467 10,019,663,791 7,009 198,898,177 69.42
185 Fleay's barred frog (hap1 2024) Mixophyes fleayi GCA_038048845.1_aMixFle1.hap1 2,806 2,969,628,263 1,421 3,802,133 46.39
186 flier cichlid (MPI-CPG 2019 refseq) Archocentrus centrarchus GCF_007364275.1_fArcCen1 188 932,930,362 744 16,903,477 30.69
187 Florida worm lizard (hap2 2023 refseq) Rhineura floridana GCF_030035675.1_rRhiFlo1.hap2 76 2,307,419,594 242 6,466,284 45.32
188 freshwater garfish (primary hap 2020) Xenentodon cancila GCA_014839995.1_fXenCan1.pri 410 736,214,936 1,373 7,503,584 27.54
189 Gaboon caecilian (v1.1 2019 refseq) Geotrypetes seraphini GCF_902459505.1_aGeoSer1.1 164 3,779,430,019 433 5,502,713 52.86
190 Gaboon caecilian (v1.2 2021 genbank) Geotrypetes seraphini GCA_902459505.2_aGeoSer1.2 164 3,779,430,017 433 5,502,713 52.86
191 garden warbler (primary hap 2020) Sylvia borin GCA_014839755.1_bSylBor1.pri 176 1,045,652,180 134 1,835,448 20.28
192 gharial (hap2 2023) Gavialis gangeticus GCA_030020295.1_rGavGan2.hap2 160 2,328,538,659 118 1,108,111 32.92
193 giant manta (hap1 2023) Mobula birostris GCA_030028105.1_sMobBir1.hap1 4,715 4,014,635,230 1,810 30,852,630 54.43
194 gilthead seabream (v2 2021) Sparus aurata GCA_900880675.2_fSpaAur1.2 176 833,595,063 1,050 342,268 29.60
195 golden eagle (v1.4 2021) Aquila chrysaetos chrysaetos GCF_900496995.4_bAquChr1.4 144 1,233,704,830 228 5,201,260 20.02
196 golden spiny mouse (2020) Acomys russatus GCF_903995435.1_mAcoRus1.1 623 2,301,522,284 880 7,954,169 32.57
197 Goodes thornscrub tortoise (Sinaloan 2019) Gopherus evgoodei GCF_007399415.2_rGopEvg1_v1.p 383 2,298,564,209 562 29,560,319 33.37
198 Grand Cayman blue iguana (hap1 2023) Cyclura pinguis GCA_030412105.1_rCycPin1.hap1 30 1,983,631,412 28 1,082,164 32.57
199 gray short-tailed opossum (mMonDom1 primary hap 2023 refseq) Monodelphis domestica GCF_027887165.1_mMonDom1.pri 13 3,586,166,573 2,255 31,907,317 43.38
200 gray squirrel (2020) Sciurus carolinensis GCF_902686445.1_mSciCar1.2 752 2,815,397,268 1,824 604,531 34.56
201 gray wolf (2021) Canis lupus GCA_905319855.2_mCanLor1.2 82 2,447,463,909 166 45,800 34.76
202 great cormorant (primary hap 2024 refseq) Phalacrocorax carbo GCF_963921805.1_bPhaCar2.1 350 1,283,623,959 493 98,600 22.67
203 great fruit-eating bat (v2 hap1 2024) Artibeus lituratus GCA_038363095.2_mArtLit.hap1 487 2,311,617,438 45 7,300 35.13
204 great potoo (primary hap 2020 refseq) Nyctibius grandis GCF_013368605.1_bNycGra1.pri 190 1,256,393,467 243 6,139,133 23.97
205 great scallop (2019) Pecten maximus GCF_902652985.1_xPecMax1.1 3,983 918,306,378 1,827 691,874 32.72
206 great white shark (primary hap 2021) Carcharodon carcharias GCF_017639515.1_sCarCar2.pri 719 4,286,311,191 2,645 19,150,268 52.46
207 greater argentine (primary hap 2023) Argentina silus GCA_951799395.1_fArgSil1.1 1,024 670,765,936 1,752 350,400 39.30
208 greater horseshoe bat (mRhiFer1 2020) Rhinolophus ferrumequinum GCA_014108255.1_mRhiFer1.p 50 2,072,561,339 292 16,878,831 34.75
209 greater horseshoe bat (v2 MPI-CBG 2019) Rhinolophus ferrumequinum GCF_004115265.2_mRhiFer1_v1.p 134 2,075,768,562 158 7,546,098 34.43
210 greater mouse-eared bat (2020 Bat1K) Myotis myotis GCF_014108235.1_mMyoMyo1.p 93 2,002,797,769 538 28,953,405 35.85
211 greater pipefish (v1.2 2020 refseq) Syngnathus acus GCF_901709675.1_fSynAcu1.2 87 324,331,233 43 13,700 25.95
212 greater sac-winged bat (primary hap 2024 refseq) Saccopteryx bilineata GCF_036850765.1_mSacBil1_pri_phased_curated 256 2,612,309,609 468 33,092,045 43.31
213 greater sand-eel (primary hap 2023) Hyperoplus immaculatus GCA_949357725.1_fHypImm3.1 1,568 797,804,280 1,188 237,600 40.07
214 green sea turtle (v2 primary hap 2021) Chelonia mydas GCF_015237465.2_rCheMyd1.pri.v2 93 2,134,375,114 298 11,960,176 31.96
215 grey gurnard (primary hap 2023) Eutrigla gurnardus GCA_963514095.1_fEutGur1.1 319 680,483,561 553 110,600 35.71
216 grey whale (primary hap 2023 refseq) Eschrichtius robustus GCF_028021215.1_mEscRob2.pri 703 2,982,418,581 279 55,800 46.40
217 gudgeon (primary hap 2023) Gobio gobio GCA_949357685.1_fGobGob1.1 231 1,460,679,231 1,046 209,200 68.84
218 gyrfalcon (primary hap 2020) Falco rusticolus GCF_015220075.1_bFalRus1.pri 133 1,195,847,496 635 5,345,814 18.84
219 harbor porpoise (primary hap 2024 refseq) Phocoena phocoena GCF_963924675.1_mPhoPho1.1 439 2,512,713,112 966 193,200 39.05
220 Harpy eagle (primary hap 2022 refseq) Harpia harpyja GCF_026419915.1_bHarHar1_primary_haplotype 322 1,351,447,071 342 2,651,394 24.82
221 Hawaiian crow (primary hap 2021 refseq) Corvus hawaiiensis GCF_020740725.1_bCorHaw1.pri.cur 188 1,151,611,379 294 1,813,227 23.63
222 hazel dormouse (primary hap 2023) Muscardinus avellanarius GCA_963383645.1_mMusAve1.1 213 2,497,520,702 1,805 361,000 43.99
223 hemichordates Saccoglossus (HW-2024a hap1 2024) Saccoglossus sp. HW-2024a GCA_040954625.1_ASM4095462v1 77 328,607,491 254 127,000 29.41
224 hippopotamus (v2 hap2 2023 refseq) Hippopotamus amphibius kiboko GCF_030028045.1_mHipAmp2.hap2 357 2,538,259,262 226 45,200 35.48
225 hoatzin (hap1 2023) Opisthocomus hoazin GCA_030867145.1_bOpiHoa1.hap1 415 1,482,459,898 268 53,600 31.68
226 honeycomb rockfish (primary hap 2020) Sebastes umbrosus GCF_015220745.1_fSebUmb1.pri 138 800,904,020 215 1,393,892 36.28
227 horn shark (hap2 2024) Heterodontus francisci GCA_036365495.1_sHetFra1.hap2 1,496 5,196,885,747 2,790 29,620,202 62.99
228 horn shark (sHetFra1hap1 2024) Heterodontus francisci GCF_036365525.1_sHetFra1.hap1 2,306 6,013,048,672 2,781 28,369,521 6.74
229 horse (paternal hap 2024) Equus caballus GCA_036426135.1_mEquCab1.pat 602 2,596,737,506 114 22,800 35.42
230 hourglass treefrog (paternal 2023 refseq) Dendropsophus ebraccatus GCF_027789765.1_aDenEbr1.pat 2,200 2,214,937,069 804 6,692,944 51.44
231 house finch (primary hap 2022 refseq) Haemorhous mexicanus GCF_027477595.1_bHaeMex1.pri 184 1,148,233,018 296 11,207,146 23.53
232 house mouse (primary hap 2023) Mus musculus GCA_949316315.1_mMusMuc1.1 179 2,770,968,735 101 20,200 45.38
233 house sparrow (hap1 2024 refseq) Passer domesticus GCF_036417665.1_bPasDom1.hap1 335 1,310,131,054 204 40,402 30.41
234 Humboldt's penguin (bSphHub1 primary hap 2022) Spheniscus humboldti GCA_027474245.1_bSphHub1.pri 136 1,358,357,718 253 1,055,061 25.75
235 humpback whale (KW2013002 2024) Megaptera novaeangliae GCA_041834305.1_ASM4183430v1 1,355 3,146,604,256 88 8,800 48.29
236 hybrid cattle (Angus x Brahman F1 Brahman haplotype 2018) Bos indicus x Bos taurus GCF_003369695.1_UOA_Brahman_1 1,250 2,680,953,056 302 1,636,497 47.57
237 Iberian parsley frog (aPelIbe1 2024) Pelodytes ibericus GCA_036172795.1_aPelIbe1.pri 99 2,077,659,799 262 52,400 49.33
238 Iberian ribbed newt (20211129_DDA 2022 genbank) Pleurodeles waltl GCA_026652325.1_ASM2665232v1 267 20,300,798,037 922 333,042 71.01
239 Indian glassy fish (v2 2020) Parambassis ranga GCA_900634625.2_fParRan2.2 157 551,029,983 1,523 10,561,548 25.10
240 Indo-Pacific tarpon (2020) Megalops cyprinoides GCF_013368585.1_fMegCyp1.pri 207 959,258,046 63 283,098 22.11
241 intermediate roundleaf bat (primary hap 2023) Hipposideros larvatus GCA_031876335.1_mHipLar1.pri 69 2,338,923,724 119 33,404 35.41
242 Italian wall lizard (rPodSic1.hap1.1 2024) Podarcis siculus GCA_964188175.1_rPodSic1.hap1.1 294 1,571,381,643 762 152,400 40.39
243 Japanese sawshark (hap1 2024) Pristiophorus japonicus GCA_044704955.1_sPriJap1.hap1 4,317 5,923,050,865 5,985 1,196,474 4.54
244 jewelled blenny (2019) Salarias fasciatus GCF_902148845.1_fSalaFa1.1 203 797,507,141 602 10,447,897 26.61
245 John dory (primary hap 2023) Zeus faber GCA_960531495.1_fZeuFab8.1 191 804,731,948 887 177,400 39.97
246 kagu (bRhyJub1 primary hap 2023) Rhynochetos jubatus GCA_027574665.1_bRhyJub1.pri 148 1,331,454,348 300 525,241 28.26
247 kakapo (v2 Jane 2020 refseq) Strigops habroptila GCF_004027225.2_bStrHab1.2.pri 89 1,148,597,545 373 10,544,081 20.53
248 killer whale (2022) Orcinus orca GCF_937001465.1_mOrcOrc1.1 448 2,647,351,467 123 24,436 41.64
249 king vulture (hap1 2024) Sarcoramphus papa GCA_037962945.1_bSarPap1.hap1 124 1,543,950,730 154 30,800 32.53
250 koala (Bilbo 61053 2022) Phascolarctos cinereus GCA_003287225.2_phaCin_HiC 1,246 3,192,631,935 669 66,801 39.25
251 Korean giant-fin mudskipper (v1.2 primary hap 2023) Periophthalmus magnuspinnatus GCF_009829125.3_fPerMag1.2.pri 122 752,605,561 701 7,178,761 43.07
252 Kuhl's pipistrelle (2020) Pipistrellus kuhlii GCF_014108245.1_mPipKuh1.p 202 1,775,688,541 394 12,201,491 34.57
253 lammergeier (bGypBar2 primary hap 2023) Gypaetus barbatus GCA_028022735.1_bGypBar2.pri 232 1,365,299,843 259 2,000,432 26.52
254 lance-tailed manakin (2020) Chiroxiphia lanceolata GCF_009829145.1_bChiLan1.pri 93 1,089,631,598 206 3,303,511 20.07
255 lancelets B.floridae x B.belcheri (bbbf 2021) Branchiostoma floridae x Branchiostoma belcheri GCA_019207075.1_Bb-hap 79 405,532,174 108 492,029 28.95
256 lancelets B.floridae x B.japonicum (bjbf 2020) Branchiostoma floridae x Branchiostoma japonicum GCA_015852565.1_bf_hap-2 341 490,782,628 168 84,000 27.78
257 lanner falcon (bFalBia1 primary hap 2022 refseq) Falco biarmicus GCF_023638135.1_bFalBia1.pri 397 1,285,492,283 158 2,152,808 23.59
258 lantern fish (primary hap 2024) Nannobrachium achirus GCA_963921795.1_fNanAch1.1 673 1,658,848,640 2,397 479,400 54.08
259 large tree shrew (BS70 2022) Tupaia tana GCA_026018925.1_mTupTan1 1,198 2,948,294,157 1,188 115,755 46.11
260 large-eye snaggletooth (primary hap 2023) Borostomias antarcticus GCA_949987555.1_fBorAnt1.1 1,378 909,249,001 2,631 526,200 46.88
261 largemouth bass (2-A1 2021) Micropterus salmoides GCA_019677235.1_HNU_Msal_1.0 202 877,669,248 672 335,002 29.68
262 largescale foureyes (primary hap 2020) Anableps anableps GCA_014839685.1_fAnaAna1.pri 33 867,632,993 107 306,559 29.88
263 Lataste's viper (primary hap 2022) Vipera latastei GCA_024294585.1_rVipLat1.pri 56 1,631,568,913 769 3,547,667 44.82
264 leatherback sea turtle (v4 primary hap 2021 refseq) Dermochelys coriacea GCF_009764565.3_rDerCor1.pri.v4 40 2,164,762,090 668 5,594,612 34.21
265 lemon sole (primary hap 2024) Microstomus kitt GCA_964266715.1_fMicKit1.1 1,581 752,333,918 409 81,800 39.40
266 lesser black-backed gull (primary hap 2024) Larus fuscus GCA_963932225.1_bLarFus1.1 1,367 1,324,286,540 537 107,415 27.18
267 lesser Egyptian jerboa (2021) Jaculus jaculus GCF_020740685.1_mJacJac1.mat.Y.cur 160 2,863,865,261 561 13,702,780 44.14
268 lesser horseshoe bat (hap1 2024) Rhinolophus hipposideros GCA_964194185.1_mRhiHip2.hap1.1 723 2,171,328,640 1,627 325,400 33.62
269 lesser kestrel (v2 2021) Falco naumanni GCF_017639655.2_bFalNau1.pat 291 1,215,719,661 298 4,077,287 19.20
270 lesser noctule (mNycLei1.hap1.1 2024) Nyctalus leisleri GCA_964264875.1_mNycLei1.hap1.1 1,281 2,233,532,335 1,662 332,400 42.92
271 lesser rhea (bPtePen1 primary hap 2023 refseq) Rhea pennata GCF_028389875.1_bPtePen1.pri 180 1,269,016,774 128 1,451,673 22.80
272 lesser sac-winged bat (primary hap 2024 refseq) Saccopteryx leptura GCF_036850995.1_mSacLep1_pri_phased_curated 168 2,576,513,769 573 19,614,433 42.31
273 lesser salmon catfish (primary hap 2023 refseq) Neoarius graeffei GCF_027579695.1_fNeoGra1.pri 38 2,341,916,362 334 13,260,140 71.56
274 lesser sand-eel (primary hap 2023) Ammodytes marinus GCA_949987685.1_fAmmMar1.1 617 777,835,610 1,017 203,400 39.22
275 lesser weever (primary hap 2023) Echiichthys vipera GCA_963691815.1_fEchVip8.1 133 800,398,249 606 121,200 33.26
276 light-bulb sea squirt (2022) Clavelina lepadiformis GCA_947623445.1_kaClaLepa1.1 103 210,089,204 58 11,600 33.50
277 limp eelpout (primary hap 2023) Melanostigma gelatinosum GCA_949748355.1_fMelGel1.1 534 661,975,483 589 119,200 33.26
278 live sharksucker (v2 2021) Echeneis naucrates GCA_900963305.2_fEcheNa1.2 38 544,229,243 140 599,356 21.82
279 lizards B.pumilum (Western Cape Province JTBG20231 2024) Bradypodion pumilum GCA_035047305.1_BraPum1.0 21 2,486,266,449 18 1,777 56.83
280 lizards F.pardalis (Fpa_1 2023) Furcifer pardalis GCA_030440675.1_ASM3044067v1 11 1,609,777,135 12 11,023 42.07
281 lizards P.bocagei (rPodBoc1.hap1.1 2024) Podarcis bocagei GCA_964188305.1_rPodBoc1.hap1.1 507 1,615,206,822 1,005 201,015 41.41
282 lizards P.erhardii (rPodErh1.hap1.1 2024) Podarcis erhardii GCA_964252035.1_rPodErh1.hap1.1 326 1,495,994,634 836 167,200 38.58
283 lizards P.melisellensis (rPodMel1.hap1.1 2024) Podarcis melisellensis GCA_964234715.1_rPodMel1.hap1.1 386 1,574,923,724 823 164,600 40.21
284 lizards P.pityusensis (rPodPit1.hap1.2 2024) Podarcis pityusensis GCA_964106645.2_rPodPit1.hap1.2 336 1,515,373,509 1,506 301,200 38.22
285 long-finned pilot whale (primary hap 2023) Globicephala melas GCF_963455315.1_mGloMel1.1 993 2,651,292,441 1,084 216,617 42.02
286 long-finned pilot whale (primary hap 2024) Globicephala melas GCA_963455315.2_mGloMel1.2 993 2,651,292,441 1,084 216,617 42.02
287 long-tailed duck (primary hap 2024) Clangula hyemalis GCA_963989345.1_bClaHye2.1 272 1,206,104,048 544 108,625 26.17
288 long-tailed hermit (PSU5 primary hap 2022) Phaethornis superciliosus GCA_023637945.1_DD_ASM_B1 70 1,020,112,811 141 3,809,484 20.12
289 longspined bullhead (.1 primary hap 2021) Taurulus bubalis GCA_910589615.1_fTauBub2.1 27 615,153,901 242 77,100 28.62
290 lumpfish (v1 primary hap 2019 refseq) Cyclopterus lumpus GCF_009769545.1_fCycLum1.pri 48 572,885,595 347 10,182,204 28.09
291 Macqueen's bustard (maternal hap 2024) Chlamydotis macqueenii GCA_036417535.1_bChlMac1.mat 329 1,273,933,319 100 20,000 27.09
292 maguari stork (primary hap 2021) Ciconia maguari GCA_017639555.1_bCicMag1.pri 153 1,239,437,416 232 22,209,791 19.58
293 Malawi cichlid R.sp.'chilingali' (2024) Rhamphochromis sp. 'chilingali' GCA_963969265.1_fRhaChi2.1 82 921,184,210 422 84,400 38.20
294 mallard (hap1 2024) Anas platyrhynchos GCA_964188345.1_bAnaPla2.hap1.1 936 1,300,248,985 571 114,200 28.71
295 mallard (Pekin duck Z2 2020 Zhejiang U) Anas platyrhynchos GCF_015476345.1_ZJU1.0 756 1,188,533,289 905 4,230,438 24.63
296 marbled rockcod (primary hap 2023) Notothenia rossii GCA_949606895.1_fNotRos5.1 943 1,042,906,029 4,157 831,400 44.98
297 Mauritius kestrel (primary hap 2023) Falco punctatus GCA_963210335.1_bFalPun1.1 316 1,279,277,844 407 81,600 22.85
298 Mauritius parakeet (primary hap 2023) Psittacula echo GCA_963264785.1_bPsiEch3.1 172 1,203,831,919 358 71,432 25.22
299 meadow viper (primary hap 2022) Vipera ursinii GCA_947247035.1_rVipUrs1.1 384 1,625,023,540 1,819 363,800 45.37
300 meadow vole (hap1 2024) Microtus pennsylvanicus GCA_037038515.1_mMicPen1.hap1 181 2,369,135,991 60 11,000 41.94
301 Merriam's long-tongued bat (hap1 2024) Glossophaga mutica GCA_039655065.1_mGloMut1.hap1 82 2,159,908,085 47 8,300 32.97
302 Mexican burrowing toad (hap1 2024) Rhinophrynus dorsalis GCA_037306005.1_aRhiDor1.hap1 464 4,745,569,335 2,032 406,419 53.56
303 Mexican gopher tortoise (WGS:JAMKFC01 2022) Gopherus flavomarginatus GCF_025201925.1_rGopFla2.mat.asm 621 2,460,542,086 1,866 89,638,462 34.69
304 milkfish (2019) Chanos chanos GCF_902362185.1_fChaCha1.1 31 656,929,047 112 4,230,332 26.35
305 mimic poison frog (primary hap 2023 refseq) Ranitomeya imitator GCF_032444005.1_aRanImi1.pri 1,672 5,956,610,564 765 80,159 2.40
306 minispotted lanternfish (primary hap 2023) Gymnoscopelus microlampas GCA_963454915.1_fGymMic1.1 374 1,318,656,016 1,398 279,600 47.09
307 minke whale (primary hap 2023 refseq) Balaenoptera acutorostrata GCF_949987535.1_mBalAcu1.1 1,374 2,772,885,358 1,177 235,400 42.67
308 monito del monte (primary hap 2021 refseq) Dromiciops gliroides GCF_019393635.1_mDroGli1.pri 17 3,303,199,800 260 2,929,889 42.81
309 mute swan (v2 primary hap 2021) Cygnus olor GCF_009769625.2_bCygOlo1.pri.v2 171 1,134,186,642 451 9,922,725 21.32
310 narwhal (Baffin Bay Population NGI 2022) Monodon monoceros GCA_005190385.3_NGI_Narwhal_2 101 2,341,954,608 313 31,300 37.30
311 Natterer's bat (mMyoNat1.hap1.1 2024) Myotis nattereri GCA_964212035.1_mMyoNat1.hap1.1 343 2,124,021,592 1,620 324,000 38.31
312 Nelson's sparrow (bAmmNel1 primary hap 2023 refseq) Ammospiza nelsoni GCF_027579445.1_bAmmNel1.pri 77 1,185,463,352 215 5,092,979 25.88
313 New Caledonian crow (primary hap 2019) Corvus moneduloides GCF_009650955.1_bCorMon1.pri 105 1,112,734,094 289 28,870,195 19.58
314 New Zealand spotty (primary hap refseq) Notolabrus celidotus GCF_009762535.1_fNotCel1.pri 467 846,744,125 1,135 14,268,481 33.39
315 Nicobar pigeon (hap1 2024 refseq) Caloenas nicobarica GCF_036013445.1_bCalNic1.hap1 806 1,285,834,579 117 20,400 28.09
316 nine-banded armadillo (hap2 2023) Dasypus novemcinctus GCF_030445035.1_mDasNov1.hap2 539 3,570,966,115 771 11,475,092 43.66
317 ninespine stickleback (primary hap 2023 refseq) Pungitius pungitius GCF_949316345.1_fPunPun2.1 174 480,434,100 738 147,600 28.40
318 North American deer mouse (MVZ:Mamm:240117 primary hap 2022) Peromyscus maniculatus sonoriensis GCA_026229955.1_mPerMan1.0.p 1,838 2,847,741,276 244 24,400 48.05
319 North American porcupine (mEreDor1 primary hap 2023) Erethizon dorsatum GCA_028451465.1_mEreDor1.pri 116 2,432,147,792 277 68,864 41.67
320 North Atlantic right whale (hap2 + XY 2023 refseq) Eubalaena glacialis GCF_028564815.1_mEubGla1.1.hap2._XY 789 2,843,691,573 367 4,958,084 43.93
321 North Island brown kiwi (hap1 2024 refseq) Apteryx mantelli GCF_036417845.1_bAptMan1.hap1 408 1,504,396,159 170 34,000 27.67
322 northern bat (primary hap 2023) Eptesicus nilssonii GCA_951640355.1_mEptNil1.1 207 2,064,119,045 1,423 284,600 38.22
323 northern black mastiff bat (mMolNig1 2022) Molossus nigricans GCA_026936385.1_BBF_mMolNig1_v1 146 2,407,891,554 199 99,500 39.26
324 northern black mastiff bat (mMolNig1hap1 2024) Molossus nigricans GCA_039880945.1_mMolNig1.hap1 366 2,567,103,348 113 17,300 41.59
325 northern bottlenose whale (primary hap 2023) Hyperoodon ampullatus GCA_949752795.1_mHypAmp2.1 757 2,828,760,712 1,098 219,600 44.84
326 northern gannet (hap2 2023) Morus bassanus GCA_031468815.1_bMorBas2.hap2 421 1,294,804,326 248 49,600 21.09
327 northern goshawk (bAccGen1 primary hap v1 2022 refseq) Accipiter gentilis GCF_929443795.1_bAccGen1.1 454 1,398,011,397 183 36,600 27.31
328 northern goshawk (v2 primary hap 2022 genbank) Accipiter gentilis GCA_929443795.2_bAccGen1.2 455 1,398,030,142 183 36,600 27.31
329 northern pike (primary hap 2020 refseq) Esox lucius GCF_011004845.1_fEsoLuc1.pri 53 918,748,614 112 1,022,735 32.97
330 northern pintail (primary hap 2024 refseq) Anas acuta GCF_963932015.1_bAnaAcu1.1 394 1,189,296,988 631 125,881 25.92
331 Norway rat BN7.2 Rattus norvegicus GCF_015227675.2_mRatBN7.2 176 2,647,915,728 581 21,334,956 45.26
332 Obi paradise-crow (lycPyr6 2020) Lycocorax pyrrhopterus obiensis GCA_014706295.1_ASM1470629v1 1,695 1,107,771,238 1,602 5,759,488 20.21
333 olive python (hap1 2023) Liasis olivaceus GCA_030867105.1_rLiaOli1.hap1 43 1,486,119,866 73 297,716 30.16
334 one-colored caecilian (2021) Microcaecilia unicolor GCA_901765095.2_aMicUni1.2 1,081 4,685,939,421 2,452 47,437,278 52.44
335 orange-tipped seq squirt (primary hap 2023) Corella eumyota GCA_963082875.1_kaCorEumy4.1 105 129,324,498 244 48,800 51.10
336 orbiculate cardinalfish (2019) Sphaeramia orbicularis GCF_902148855.1_fSphaOr1.1 340 1,342,662,642 1,844 3,566,081 48.65
337 painted frog (primary hap 2022) Discoglossus pictus GCA_027410445.1_aDisPic1.pri 1,318 3,872,602,052 3,681 62,395,995 55.23
338 pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 primary hap 2020) Phyllostomus discolor GCF_004126475.2_mPhyDis1.pri.v3 77 2,108,832,841 884 15,088,856 30.59
339 Pallas's mastiff bat Molossus molossus GCF_014108415.1_mMolMol1.p 60 2,315,568,481 349 47,372,874 37.10
340 pallid bat (TK200870 primary hap 2023) Antrozous pallidus GCA_027563665.1_DD_ASM_mAP_20210503 93 2,126,460,045 234 5,884,678 39.43
341 palmate newt (primary hap 2024) Lissotriton helveticus GCA_964261635.1_aLisHel1.1 448 23,170,028,842 5,245 1,049,000 1.90
342 parallel lanternfish (primary hap 2024) Protomyctophum parallelum GCA_964188405.1_fProPar1.1 24 1,235,328,005 2,729 545,800 48.26
343 particolored bat (primary hap 2024) Vespertilio murinus GCA_963924515.1_mVesMur1.1 178 1,925,577,803 980 196,000 37.48
344 pejerrey (fOdoBon6 haplotype 1 2023) Odontesthes bonariensis GCA_027942865.1_fOdoBon6.hap1 189 945,823,896 282 91,800 35.17
345 pejerrey (fOdoBon6 haplotype 2 2023) Odontesthes bonariensis GCA_027942885.1_fOdoBon6.hap2 334 974,945,057 135 67,500 36.86
346 peladilla (primary hap 2021) Aplochiton taeniatus GCA_017639675.1_fAplTae1.pri 41 461,946,147 1,158 8,155,958 27.72
347 pencil smelt N.antarctica (primary hap 2024) Nansenia antarctica GCA_963989245.1_fNanAnt1.1 1,177 1,085,794,659 3,299 659,800 48.79
348 peregrine falcon (bFalPer1 primary hap 2022 refseq) Falco peregrinus GCF_023634155.1_bFalPer1.pri 125 1,311,598,859 241 4,014,394 24.67
349 Peter's clawed frog (aXenPet1 2024) Xenopus petersii GCA_038501925.1_aXenPet1.paternal.cur 888 2,883,796,191 500 100,000 45.47
350 Philippine flying lemur (primary hap 2022 refseq) Cynocephalus volans GCF_027409185.1_mCynVol1.pri 130 2,814,418,120 116 32,500 39.52
351 pig (Bamei 2023) Sus scrofa GCA_030704935.1_ASM3070493v1 379 2,671,498,991 878 439,000 40.58
352 pig-tailed macaque (mMacNem1hap1 2024) Macaca nemestrina GCA_043159975.1_mMacNem.hap1 362 3,116,305,216 260 45,400 53.54
353 pinecone soldierfish (2019) Myripristis murdjan GCF_902150065.1_fMyrMur1.1 87 835,254,674 253 1,865,832 28.16
354 pink pigeon (primary hap 2023) Nesoenas mayeri GCA_963082525.1_bNesMay2.1 143 1,183,271,950 509 101,800 22.92
355 pink sea squirt (2022) Ascidia mentula GCA_947561715.1_kaAscMent1.1 96 196,975,169 32 6,400 26.22
356 pink-footed goose (primary hap 2024) Anser brachyrhynchus GCA_964034855.1_bAnsBra1.1 715 1,287,337,719 1,137 227,400 29.51
357 pitted-shelled turtle (YL-2023 2023) Carettochelys insculpta GCA_033958435.1_ASM3395843v1 134 2,180,317,067 12 2,400 47.95
358 plains spadefoot toad (primary hap 2022) Spea bombifrons GCF_027358695.1_aSpeBom1.2.pri 17 987,655,159 102 3,822,643 36.29
359 platypus (Pmale09 v4 2020) Ornithorhynchus anatinus GCF_004115215.2_mOrnAna1.pri.v4 322 1,859,281,927 515 15,158,118 50.98
360 plumbeous ibis (primary hap 2021) Theristicus caerulescens GCA_020745775.1_bTheCae1.pri.cur 88 1,203,372,763 104 2,268,207 20.10
361 pollack (primary hap 2023) Pollachius pollachius GCA_949987615.1_fPolPol2.1 616 606,767,444 1,810 362,000 33.80
362 prehistoric monster fish (2019 refseq) Thalassophryne amazonica GCF_902500255.1_fThaAma1.1 464 2,446,592,878 2,554 12,594,266 59.92
363 proboscis bat (hap1 2024) Rhynchonycteris naso GCA_037038545.1_mRhyNas2.hap1 41 2,455,066,473 68 10,600 41.49
364 Puerto Rican coqui (hap1 2024) Eleutherodactylus coqui GCA_035609145.1_aEleCoq1.hap1 957 3,371,316,047 659 131,800 54.01
365 pygmy chimpanzee (v2 primary hap 2024 refseq) Pan paniscus GCF_029289425.2_NHGRI_mPanPan1-v2.0_pri 31 3,244,905,271 6 5,035,000 50.67
366 pygmy sperm whale (haplotype 1 2022 refseq) Kogia breviceps GCF_026419965.1_mKogBre1_haplotype_1 581 2,555,855,246 143 4,797,769 39.97
367 rabbit (primary hap 2024) Oryctolagus cuniculus GCA_964237555.1_mOryCun1.1 222 2,804,674,863 2,276 455,200 41.73
368 rainbow smelt (fOsmMor3 primary hap 2024) Osmerus mordax GCA_038355195.1_fOsmMor3.pri 365 497,673,479 1,907 364,200 35.25
369 razorbill (2006_11_07_Graehlm_vinge_78 2019) Alca torda GCA_008658365.1_bAlcTor1_primary 95 1,178,492,568 227 3,561,127 20.12
370 red deer (2021) Cervus elaphus GCF_910594005.1_mCerEla1.1 144 2,886,603,524 40 10,400 44.67
371 red fox (hap1 2024) Vulpes vulpes GCA_964106825.2_mVulVul1.hap1.2 461 2,411,727,275 1,845 369,000 33.01
372 red-bellied piranha (primary hap 2020) Pygocentrus nattereri GCF_015220715.1_fPygNat1.pri 55 1,222,050,449 303 10,159,184 35.79
373 red-billed tropicbird (maternal hap 2024) Phaethon aethereus GCA_964289735.1_bPhaAeh10.maternal.1 657 1,321,027,743 1,269 253,800 25.01
374 red-crested pochard (primary hap 2024) Netta rufina GCA_964035555.1_bNetRuf1.1 141 1,166,978,622 714 142,800 24.55
375 red-crested turaco (primary hap 2019) Tauraco erythrolophus GCA_009769465.1_bTauEry1.pri 140 1,252,271,553 344 26,400,695 22.20
376 red-fronted tinkerbird (primary hap 2020 refseq) Pogoniulus pusillus GCF_015220805.1_bPogPus1.pri 252 1,272,338,968 307 6,012,757 35.91
377 red-legged seriema (primary hap 2019) Cariama cristata GCA_009819825.1_bCarCri1.pri 110 1,215,245,693 194 4,933,338 19.73
378 red-throated loon (hap2 2023 refseq) Gavia stellata GCF_030936135.1_bGavSte3.hap2 1,185 1,321,270,170 249 49,800 23.65
379 red-winged blackbird (BioBank_ID:100140 2023) Agelaius phoeniceus GCF_020745825.1_Agelaius_phoeniceus_1.1 410 1,188,547,179 106 51,600 25.46
380 reedfish (2021) Erpetoichthys calabaricus GCF_900747795.2_fErpCal1.3 169 3,613,551,144 1,431 29,707,657 47.53
381 Reeves' muntjac (alternate hap 2024) Muntiacus reevesi GCA_963930665.1_mMunRee1.1_alternate_haplotype 8,892 2,863,788,737 0 0 48.30
382 Reeves' muntjac (primary hap 2024) Muntiacus reevesi GCF_963930625.1_mMunRee1.1 267 2,656,168,540 682 136,400 39.90
383 Rice's whale (hap2 2023 refseq) Balaenoptera ricei GCF_028023285.1_mBalRic1.hap2 774 2,678,442,663 334 2,621,494 41.09
384 rifleman (primary hap 2021) Acanthisitta chloris GCA_016904835.1_bAcaChl1.pri 206 1,077,387,582 195 4,215,879 19.97
385 Riggenbach's reed frog (aHypRig1 primary hap 2024) Hyperolius riggenbachi GCF_040937935.1_aHypRig1.pri 477 4,915,935,452 3,039 606,696 60.27
386 ring-tailed lemur (primary hap 2021) Lemur catta GCF_020740605.2_mLemCat1.pri 185 2,245,601,549 210 3,641,621 37.86
387 river trout (v2 2021) Salmo trutta GCA_901001165.2_fSalTru1.2 1,441 2,371,880,186 3,941 73,600,705 55.89
388 roach minnow (primary hap 2023) Rutilus rutilus GCA_951802725.1_fRutRut2.1 85 1,100,195,650 471 94,200 49.02
389 rock gunnel (primary hap 2021) Pholis gunnellus GCA_910591455.2_fPhoGun1.2 101 588,696,950 418 137,000 25.63
390 rock pigeon (v2 racing homer 2024 refseq) Columba livia GCF_036013475.1_bColLiv1.pat.W.v2 869 1,325,566,026 249 46,900 29.94
391 rock ptarmigan (primary hap 2022 refseq) Lagopus muta GCF_023343835.1_bLagMut1_primary 165 1,026,771,810 210 71,937 21.77
392 rough bullseye (RE-2024b hap1 2024) Pempheris klunzingeri GCA_042242105.1_fPemKlu1.hap1 441 646,252,061 87 17,200 30.17
393 royal ground snake (hap1 2023) Erythrolamprus reginae GCA_031021105.1_rEryReg1.hap1 400 1,964,049,041 1,391 278,200 53.46
394 rudd (fScaEry2.hap1.1 2024) Scardinius erythrophthalmus GCA_964197995.1_fScaEry2.hap1.1 755 1,229,666,150 836 167,200 51.27
395 rufous frog (hap2 2023) Leptodactylus fuscus GCA_031893055.1_aLepFus1.hap2 1,266 2,197,996,823 976 20,381,759 59.61
396 saddleback dolphin (v2 primary hap 2024 refseq) Delphinus delphis GCF_949987515.2_mDelDel1.2 630 2,663,516,986 968 193,431 42.65
397 Saker falcon (primary hap 2022 refseq) Falco cherrug GCF_023634085.1_bFalChe1.pri 283 1,309,385,023 258 3,961,655 24.96
398 saltmarsh sparrow (bAmmCau1 primary hap 2023 refseq) Ammospiza caudacuta GCF_027887145.1_bAmmCau1.pri 282 1,241,209,685 363 2,919,107 29.04
399 San Diegan legless lizard (HBS135921 primary hap 2023) Anniella stebbinsi GCA_029215775.1_rAnnSte1.0.hap1 134 1,890,507,581 21 2,100 39.04
400 San Diegan tiger whiptail (HBS 135688 2022) Aspidoscelis tigris stejnegeri GCA_023333525.1_rAspTig1.0.p 74 1,335,668,279 39 3,900 36.99
401 San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 refseq) Elgaria multicarinata webbii GCF_023053635.1_rElgMul1.1.pri 34 1,790,500,004 73 12,700 40.44
402 sand lizard (primary hap 2019) Lacerta agilis GCF_009819535.1_rLacAgi1.pri 29 1,391,404,169 379 3,491,078 34.50
403 sardine (primary hap 2023 refseq) Sardina pilchardus GCF_963854185.1_fSarPil1.1 240 869,396,467 1,654 330,800 37.59
404 Sardinian treefrog (hap1 2023 refseq) Hyla sarda GCF_029499605.1_aHylSar1.hap1 3,474 4,142,159,359 2,297 459,227 64.33
405 Savannah sparrow (primary hap 2023) Passerculus sandwichensis GCA_031885435.1_bPasSan2.pri 110 1,270,940,266 249 2,812,735 27.00
406 Schreibers' long-fingered bat (hap1 2024) Miniopterus schreibersii GCA_964146895.1_mMinSch1.hap1.1 265 1,852,127,854 1,322 264,400 31.12
407 sea lamprey (primary hap 2020) Petromyzon marinus GCF_010993605.1_kPetMar1.pri 1,434 1,089,050,413 930 15,013,687 50.62
408 seaside sparrow (bAmmMar1 primary hap 2024) Ammospiza maritima maritima GCA_036010785.1_bAmmMar1.pri 501 1,397,856,043 365 2,055,583 34.58
409 shanny (primary hap 2023) Lipophrys pholis GCA_963383615.1_fLipPho2.1 847 768,243,328 598 119,616 29.07
410 sharpnose sevengill shark (hap1 2024 refseq) Heptranchias perlo GCA_035084215.1_sHepPer1.hap1 1,880 3,249,935,392 1,834 366,800 57.50
411 siamang (v2.1 Jambi primary hap 2024 refseq) Symphalangus syndactylus GCF_028878055.3_NHGRI_mSymSyn1-v2.1_pri 27 3,262,904,224 2 1,000,001 55.90
412 Siamese fighting fish (v4 primary hap 2023) Betta splendens GCF_900634795.4_fBetSpl5.4 36 427,001,245 321 31,466 23.21
413 Skyros wall lizard (v2 hap1 2024) Podarcis gaigeae GCA_964106915.2_rPodGai1.hap1.2 211 1,514,643,635 883 176,600 38.22
414 slow loris (primary hap 2022) Nycticebus coucang GCF_027406575.1_mNycCou1.pri 84 2,917,154,053 218 4,119,506 40.79
415 smaller spotted catshark (v1.1 primary hap 2020 refseq) Scyliorhinus canicula GCF_902713615.1_sScyCan1.1 646 4,220,406,627 7,146 64,220,747 51.42
416 smaller spotted catshark (v1.2 primary hap 2021 genbank) Scyliorhinus canicula GCA_902713615.2_sScyCan1.2 645 4,220,389,930 7,146 64,220,747 51.42
417 smalleye Pacific opah (hap2 2023 refseq) Lampris incognitus GCF_029633865.1_fLamInc1.hap2 544 1,482,357,630 3,115 622,730 53.30
418 smalltooth sawfish (v2.1 primary hap 2019 refseq) Pristis pectinata GCF_009764475.1_sPriPec2.1.pri 172 2,267,840,987 698 20,562,876 54.48
419 Papuan ground boa (hap2 2024 refseq) Candoia aspera GCF_035149785.1_rCanAsp1.hap2 149 1,530,810,380 101 20,200 33.56
420 snake N.helvetica (rNatHel1.hap1.1 2024) Natrix helvetica GCA_964273705.1_rNatHel1.hap1.1 487 1,777,516,490 2,010 402,000 46.17
421 song sparrow (primary hap 2024 refseq) Melospiza melodia melodia GCF_035770615.1_bMelMel2.pri 353 1,541,245,192 299 1,079,098 39.28
422 soprano pipistrelle (primary hap 2023) Pipistrellus pygmaeus GCA_949987585.1_mPipPyg2.1 243 1,895,125,685 161 32,017 37.73
423 South Island takahe (primary hap 2021) Porphyrio hochstetteri GCA_020800305.1_bPorHoc1.mat.Z.cur 174 1,270,294,353 327 5,316,249 25.92
424 southern bluefin tuna (primary hap 2021 refseq) Thunnus maccoyii GCF_910596095.1_fThuMac1.1 58 782,423,979 184 31,592 26.89
425 Southern dwarf chameleon (Gauteng JTBG20232 2024) Bradypodion ventrale GCA_035047345.1_BraVen1.1 113 2,373,187,502 22 2,189 54.44
426 southern grasshopper mouse (2020) Onychomys torridus GCF_903995425.1_mOncTor1.1 2,949 2,468,394,440 2,143 26,162,626 32.74
427 southern tamandua (mTamTet1 primary hap 2022) Tamandua tetradactyla GCA_023851605.1_mTamTet1.pri 201 3,205,741,135 961 17,897,414 45.80
428 southern two-toed sloth (mChoDid1 primary hap 2020) Choloepus didactylus GCF_015220235.1_mChoDid1.pri 146 3,214,702,648 1,243 80,992,407 40.51
429 Sowerby's beaked whale (hap1 2024) Mesoplodon bidens GCA_964165515.1_mMesBid2.hap1.1 1,602 2,999,098,505 1,095 219,000 45.32
430 speckled wood butterfly (refseq 2021) Pararge aegeria GCF_905163445.1_ilParAegt1.1 70 516,571,003 11 1,998 44.44
431 speckled mousebird (hap1 2023 refseq) Colius striatus GCF_028858725.1_bColStr4.1.hap1 191 1,212,482,152 161 5,847,728 23.44
432 spotted gar (fLepOcu1hap2 2024) Lepisosteus oculatus GCF_040954835.1_fLepOcu1.hap2 816 1,200,589,847 95 19,000 38.23
433 spotted ratfish (hap2 2024) Hydrolagus colliei GCA_035084275.1_sHydCol1.hap2 532 1,003,172,678 1,952 390,400 44.82
434 starry smooth-hound (sMusAst1.hap1.1 2024) Mustelus asterias GCA_964213995.1_sMusAst1.hap1.1 5,314 3,679,792,345 3,590 718,000 54.95
435 sterlet (maternal hap 2022 refseq) Acipenser ruthenus GCF_902713425.1_fAciRut3.2_maternal_haplotype 1,731 1,899,810,788 433 86,300 43.22
436 stone loach (primary hap 2022) Barbatula barbatula GCA_947034865.1_fBarBar1.1 100 617,663,352 825 165,000 39.89
437 striped catfish (primary hap 2022 refseq) Pangasianodon hypophthalmus GCF_027358585.1_fPanHyp1.pri 58 764,974,446 236 3,879,978 37.93
438 striped dolphin (primary hap 2023) Stenella coeruleoalba GCA_951394435.1_mSteCoe1.1 638 2,691,423,227 993 198,431 43.09
439 Sumatran orangutan (v2 AG06213 primary hap 2024 refseq) Pongo abelii GCF_028885655.2_NHGRI_mPonAbe1-v2.0_pri 30 3,259,870,029 11 8,061,256 54.90
440 Suruca trogon (primary hap 2021) Trogon surrucura GCA_020746105.1_bTroSur1.pri.cur 182 1,165,749,515 253 10,270,755 22.51
441 Suwannee snapping turtle (hap2 2023) Macrochelys suwanniensis GCA_033349115.1_rMacSuw1.hap2 199 1,937,254,095 361 72,200 32.82
442 Swainson's thrush (v2 primary hap 2020) Catharus ustulatus GCF_009819885.2_bCatUst1.pri.v2 160 1,131,616,530 429 12,903,695 22.52
443 swamp sparrow (bMelGeo1 primary hap 2023 refseq) Melospiza georgiana GCF_028018845.1_bMelGeo1.pri 40 1,162,015,399 236 1,233,091 24.53
444 swift parrot (hap1 2024) Lathamus discolor GCF_037157495.1_bLatDis1.hap1 367 1,241,003,407 186 2,209,747 26.11
445 tailed frog (A.truei hap1 2024) Ascaphus truei GCA_040206685.1_aAscTru1.hap1 3,549 3,722,616,900 6,020 1,204,076 55.73
446 tammar wallaby (mMacEug1 primary hap 2023) Notamacropus eugenii GCA_028372415.1_mMacEug1.pri 315 3,448,908,279 515 6,550,697 39.53
447 European leaf-toed gecko (hap1 2023) Euleptes europaea GCF_029931775.1_rEulEur1.hap1 591 1,781,916,107 153 4,045,040 39.82
448 Tasmanian devil Sarcophilus harrisii GCF_902635505.1_mSarHar1.11 106 3,086,674,442 354 46,771 44.34
449 tawny frogmouth (bPodStr1 primary hap 2023) Podargus strigoides GCA_028020825.1_bPodStr1.pri 1,038 1,271,141,449 203 2,167,278 27.67
450 tawny owl (hap1 2023) Strix aluco GCA_031877795.1_bStrAlu1.hap1 203 1,414,802,443 281 4,312,653 27.44
451 thickback sole (primary hap 2023) Microchirus variegatus GCA_963457635.1_fMicVar1.1 188 724,694,306 454 90,800 40.27
452 thicklip grey mullet (primary hap 2023) Chelon labrosus GCA_963514085.1_fCheLab1.1 363 717,420,143 610 122,000 27.59
453 thorny skate (v1.1 primary hap CabotCenter1 2020) Amblyraja radiata GCF_010909765.2_sAmbRad1.1.pri 957 2,558,784,953 3,753 190,972,533 52.28
454 three-spined stickleback (hap1 2024) Gasterosteus aculeatus GCA_964276395.1_fGasAcu3.hap1.1 130 511,155,287 331 66,200 27.34
455 tiny Cayenne caecilian Microcaecilia unicolor GCF_901765095.1_aMicUni1.1 1,081 4,685,939,420 2,452 47,437,278 52.44
456 torafugu (fTakRub1.3 2021 genbank) Takifugu rubripes GCA_901000725.3_fTakRub1.3 128 384,126,663 402 3,688,529 20.93
457 tourmaline sunangel (hap1 2024) Heliangelus exortis GCA_036169615.1_bHelExo1.hap1 131 1,049,650,714 437 85,400 21.23
458 Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022) Corynorhinus townsendii GCA_026230045.1_mCorTow1.0.hap2 182 1,961,562,149 217 21,700 36.37
459 trahira (hap2 2023) Hoplias malabaricus GCA_029633875.1_fHopMal1.hap2 452 1,117,251,445 907 44,518,715 39.05
460 trahira (v2 hap1 2024 genbank) Hoplias malabaricus GCA_029633855.2_fHopMal1.hap1 597 1,186,354,877 989 65,101,941 37.57
461 tufted duck (2019) Aythya fuligula GCF_009819795.1_bAytFul2.pri 105 1,127,004,725 163 9,417,397 22.39
462 Tungara frog (aEngPut4 2024) Engystomops pustulosus GCA_040894005.1_aEngPut4.maternal 936 2,158,203,323 436 87,200 52.56
463 tunicate A.aspersa (primary hap 2024) Ascidiella aspersa GCA_963924565.1_kaAscAspe10.1 75 308,571,401 393 73,800 35.09
464 tunicate A.turbinatum (primary hap 2021) Aplidium turbinatum GCA_918807975.1_kaAplTurb1.1 27 605,507,883 53 19,600 42.73
465 tunicate S.clava (kaStyClav1.hap1.1 2024) Styela clava GCA_964204865.1_kaStyClav1.hap1.1 389 377,969,001 34 6,800 38.35
466 turbot (primary hap 2023) Scophthalmus maximus GCA_963854745.1_fScoMax1.1 108 550,297,089 805 161,000 25.96
467 two-lined caecilian (v1.1 2019 refseq) Rhinatrema bivittatum GCF_901001135.1_aRhiBiv1.1 1,330 5,319,239,201 3,573 33,955,840 66.86
468 two-lined caecilian (v1.2 2021 genbank) Rhinatrema bivittatum GCA_901001135.2_aRhiBiv1.2 1,330 5,319,239,186 3,573 33,955,840 44.11
469 vaquita (mPhoSin1 2019) Phocoena sinus GCF_008692025.1_mPhoSin1.pri 64 2,371,524,154 212 8,045,651 44.14
470 village indigobird (merged hap OUT-0048 2022 refseq) Vidua chalybeata GCF_026979565.1_bVidCha1_merged_haplotype 177 1,080,440,577 458 165,531 20.96
471 village indigobird (purged dups hap OUT-0048 2022) Vidua chalybeata GCA_026979555.1_bVidCha1_purged_dups_haplotype 1,939 154,870,056 0 0 34.87
472 warty frogfish (primary hap 2020) Antennarius maculatus GCA_013358685.1_fAntMac1.pri 155 549,949,511 219 733,384 29.79
473 West African lungfish (Aquariam Glaser DD20220218a primary hap 2024) Protopterus annectens GCA_040939525.1_ASM4093952v1 7,125 40,524,173,670 24,438 5,865,120 4.15
474 western capercaillie (primary hap 2023) Tetrao urogallus GCA_951394365.1_bTetUro1.1 318 1,013,184,029 973 194,600 21.16
475 western European hedgehog (primary hap 2023 refseq) Erinaceus europaeus GCF_950295315.1_mEriEur2.1 1,174 2,720,683,831 3,760 752,000 54.51
476 western lowland gorilla (v2 KB3781 2024 refseq) Gorilla gorilla gorilla GCF_029281585.2_NHGRI_mGorGor1-v2.0_pri 26 3,545,850,636 2 2,000,000 50.90
477 western lowland gorilla (v2.1 KB3781 2024 genbank) Gorilla gorilla gorilla GCA_029281585.3_NHGRI_mGorGor1-v2.1_pri 26 3,545,850,631 2 2,000,000 50.90
478 western terrestrial garter snake (primary hap 2019) Thamnophis elegans GCF_009769535.1_rThaEle1.pri 365 1,672,190,305 1,518 38,185,703 42.64
479 whiskered bat (hap1 2024) Myotis mystacinus GCA_964094495.2_mMyoMys1.hap1.1 526 2,081,199,042 1,566 313,200 37.63
480 whiskered treeswift (primary hap 2021) Hemiprocne comata GCA_020745705.1_bHemCom1.pri.cur 146 1,164,813,063 218 10,174,467 21.46
481 white leghorn X broiler chicken (v2 leghorn haplotype 2021) Gallus gallus GCF_016700215.2_bGalGal1.pat.whiteleghornlayer.GRCg7w 276 1,050,511,239 409 4,496,311 20.97
482 white-beaked dolphin (primary hap 2023 refseq) Lagenorhynchus albirostris GCF_949774975.1_mLagAlb1.1 410 2,544,835,795 1,070 214,000 39.75
483 white-crowned manakin (hap1 2024 refseq) Pseudopipra pipra GCF_036250125.1_bDixPip1.hap1 696 1,165,201,947 323 64,600 21.92
484 white-tailed eagle (primary hap 2022 refseq) Haliaeetus albicilla GCF_947461875.1_bHalAlb1.1 189 1,320,315,924 424 84,800 23.68
485 white-throated dipper (primary hap 2023 refseq) Cinclus cinclus GCF_963662255.1_bCinCin1.1 277 1,170,837,027 658 131,600 26.63
486 white-toothed pygmy shrew (mSunEtr1 primary hap 2022) Suncus etruscus GCF_024139225.1_mSunEtr1.pri.cur 147 2,471,666,657 1,010 10,644,072 46.52
487 white-tufted-ear marmoset (v1.2 2021 refseq) Callithrix jacchus GCF_011100555.1_mCalJa1.2.pat.X 1,233 2,874,864,526 1,165 13,690,514 47.55
488 whooping crane (maternal hap 2023 refseq) Grus americana GCF_028858705.1_bGruAme1.mat 930 1,257,837,975 262 4,676,178 22.13
489 yellow-bellied toad (maternal hap 2024) Bombina variegata GCA_964205295.1_aBomVar4.maternal.1 4,757 9,369,791,316 6,671 1,334,200 3.72
490 yellow-crowned parrot (bAmaOch1hap1 2024) Amazona ochrocephala GCA_039720435.1_bAmaOch1.hap1 1,679 1,361,915,838 198 35,700 30.39
491 yellow-legged gull (primary hap 2024) Larus michahellis GCA_964199755.1_bLarMic1.1 618 1,405,581,498 500 100,000 29.78
492 yellow-spotted hyrax (mHetBru1 2023) Heterohyrax brucei GCA_028571685.1_mHetBru1.pri 62 3,488,059,404 276 68,688 45.91
493 yellow-throated sandgrouse (primary hap 2019) Pterocles gutturalis GCA_009769525.1_bPteGut1.pri 89 1,127,422,757 242 4,303,557 21.19
494 yellowfin seabream (v.2019 primary hap 2020) Acanthopagrus latus GCF_904848185.1_fAcaLat1.1 66 685,144,197 149 14,900 22.83
495 yellowfin tuna (primary hap 2021) Thunnus albacares GCF_914725855.1_fThuAlb1.1 68 792,101,331 70 23,300 27.09
496 zebra finch (v1.4 Blue55 female primary hap 2021 refseq) Taeniopygia guttata GCF_003957565.2_bTaeGut1.4.pri 199 1,056,271,262 352 3,634,788 20.99
497 zebra shark (hap1 2023 refseq) Stegostoma tigrinum GCF_030684315.1_sSteTig4.hap1 835 3,198,515,386 1,159 17,106,481 64.64
498 zebrafish (WGS:CALUEM01 primary hap 2022) Danio rerio GCA_944039275.1_fDanRer4.1 73 1,413,675,870 381 122,395 51.91
499 zig-zag eel (v1.3 2021 genbank) Mastacembelus armatus GCA_900324485.3_fMasArm1.3 123 591,951,591 238 13,231,344 23.47
TOTALS:total assembly count 499 308,079 1,058,275,253,603 467,383 3,215,151,720  
count common name
link to genome browser		 scientific name
and data download		 NCBI assembly sequence
count		genome size
nucleotides		 gap
count		unknown bases
(gap size sum)		masking
percent

Alternate sets of VGP assembliesNCBI Refseq
Index pages:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies
Assembly statistics:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies
Track statistics:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies