| 1 |
Abyssinian ground-hornbill (alternate hap 2019)[IGV] |
Bucorvus abyssinicus |
GCA_009769595.1_bBucAby1.alt |
SAMN12614799 |
PRJNA561886 |
2019-12-19 |
birds
|
| 2 |
adder (hap2 2024)[IGV] |
Vipera berus |
GCA_964194405.1_rVipBer3.hap2.1 |
SAMEA114293681 |
PRJEB76965 |
2024-06-27 |
reptiles
|
| 3 |
Aeolian wall lizard (La Canna islet alternate hap 2022)[IGV] |
Podarcis raffonei |
GCA_027172095.1_rPodRaf1.alt |
SAMN28455423 |
PRJNA839508 |
2022-12-21 |
reptiles
|
| 4 |
African hunting dog (LycPic1hap1 2024)[IGV] |
Lycaon pictus |
GCA_040955645.1_LycPic1.final.hap1 |
SAMN36939365 |
PRJNA1099603 |
2024-08-01 |
mammals
|
| 5 |
African ostrich (bStrCam1hap2 2024)[IGV] |
Struthio camelus |
GCA_040807015.1_bStrCam1.hap2 |
SAMN42123890 |
PRJNA1129092 |
2024-07-22 |
birds
|
| 6 |
African savanna elephant (hap1 mLoxAfr1 2023)[IGV] |
Loxodonta africana |
GCA_030020305.1_mLoxAfr1.hap1 |
SAMN32756554 |
PRJNA924321 |
2023-05-15 |
mammals
|
| 7 |
Alvarez's mastiff bat (hap2 2024)[IGV] |
Molossus alvarezi |
GCA_037176705.1_mMolAlv2.hap2 |
SAMN40002245 |
PRJNA1080660 |
2024-03-15 |
mammals
|
| 8 |
American alligator (2023 genbank)[IGV] |
Alligator mississippiensis |
GCA_030867065.1_rAllMis1 |
SAMN37045233 |
PRJNA1006700 |
2023-08-22 |
reptiles
|
| 9 |
American flamingo (alternate hap 2019)[IGV] |
Phoenicopterus ruber ruber |
GCA_009819805.1_bPhoRub2.alt |
SAMN12614931 |
PRJNA561889 |
2019-12-23 |
birds
|
| 10 |
American mink (hap2 2024)[IGV] |
Neogale vison |
GCA_964106205.1_mNeoVis2.hap2.1 |
SAMEA112468126 |
PRJEB76008 |
2024-06-06 |
mammals
|
| 11 |
American pika (hap2 2023)[IGV] |
Ochotona princeps |
GCA_030435715.1_mOchPri1.hap2 |
SAMN35822658 |
PRJNA986274 |
2023-07-13 |
mammals
|
| 12 |
American shad (fAloSap1 alternate hap 2021)[IGV] |
Alosa sapidissima |
GCA_018492705.1_fAloSap1.alt |
SAMN18857608 |
PRJNA728146 |
2021-05-24 |
fish
|
| 13 |
amphioxus (hap1 2024)[IGV] |
Branchiostoma lanceolatum |
GCA_035149815.1_klBraLanc5.hap1 |
SAMN38372375 |
PRJNA1044121 |
2024-01-05 |
invertebrate
|
| 14 |
Anna's hummingbird (alternate hap BGI_N300 2018)[IGV] |
Calypte anna |
GCA_003957575.1_bCalAnn1_v1.h |
SAMN02265252 |
PRJNA489140 |
2018-12-20 |
birds
|
| 15 |
Antarctic lanternfish (alternate hap 2023)[IGV] |
Electrona antarctica |
GCA_951214905.1_fEleAnt2.1_alternate_haplotype |
SAMEA8748807 |
PRJEB61833 |
2023-05-08 |
fish
|
| 16 |
Arabian camel (hap2 2024)[IGV] |
Camelus dromedarius |
GCA_036321565.1_mCamDro1.hap2 |
SAMN39296380 |
PRJNA1064427 |
2024-01-31 |
mammals
|
| 17 |
Aristotle's catfish (alternate hap 2022)[IGV] |
Silurus aristotelis |
GCA_946807865.1_fSilAri3.1_alternate_haplotype |
SAMEA12595289 |
PRJEB55687 |
2022-09-16 |
fish
|
| 18 |
Asian bonytongue (alternate hap)[IGV] |
Scleropages formosus |
GCA_900964985.2_fSclFor1.1_alternate_haplotype |
SAMEA4872123 |
PRJEB31996 |
2019-04-11 |
fish
|
| 19 |
Asiatic elephant (mEleMax1 alternate hap 2022)[IGV] |
Elephas maximus indicus |
GCA_024166345.1_mEleMax1_alternate_haplotype |
SAMN29174328 |
PRJNA850270 |
2022-07-05 |
mammals
|
| 20 |
Asiatic tapir (hap1 2023)[IGV] |
Tapirus indicus |
GCA_031878655.1_mTapInd1.hap1 |
SAMN37096863 |
PRJNA1010471 |
2023-09-25 |
mammals
|
| 21 |
Atlantic cod (alternate hap)[IGV] |
Gadus morhua |
GCA_902167395.1_gadMor3.0_alternate_haplotype |
SAMEA5574046 |
PRJEB33454 |
2019-07-16 |
fish
|
| 22 |
Atlantic hagfish (MG_SS 2024)[IGV] |
Myxine glutinosa |
GCF_040869285.1_UKY_Mglu_1.0 |
SAMN41069696 |
PRJNA1104135 |
2024-07-30 |
otherChordates
|
| 23 |
Atlantic halibut (alternate hap 2019)[IGV] |
Hippoglossus hippoglossus |
GCA_009819745.1_fHipHip1.alt |
SAMN12629501 |
PRJNA562002 |
2019-12-27 |
fish
|
| 24 |
Atlantic horse mackerel (alternate hap 2021)[IGV] |
Trachurus trachurus |
GCA_905171655.2_fTraTra1.2_alternate_haplotype |
SAMEA7524396 |
PRJEB42173 |
2021-11-26 |
fish
|
| 25 |
Atlantic stingray (hap2 2023)[IGV] |
Hypanus sabinus |
GCA_030144785.1_sHypSab1.hap2 |
SAMN32745077 |
PRJNA924071 |
2023-06-05 |
sharks
|
| 26 |
Atlantic white-sided dolphin (mLagAcu1.hap2.1 2024)[IGV] |
Lagenorhynchus acutus |
GCA_964270935.1_mLagAcu1.hap2.1 |
SAMEA114493133 |
PRJEB80627 |
2024-09-30 |
mammals
|
| 27 |
Australian echidna (mTacAcu1 alternate hap 2020)[IGV] |
Tachyglossus aculeatus |
GCA_015852515.1_mTacAcu1.alt |
SAMN12634963 |
PRJNA607238 |
2020-12-08 |
mammals
|
| 28 |
axolotl (DD151 2021)[IGV] |
Ambystoma mexicanum |
GCA_002915635.3_AmbMex60DD |
SAMN06554622 |
PRJNA378970 |
2021-04-01 |
amphibians
|
| 29 |
banded archerfish (alternate hap 2021)[IGV] |
Toxotes jaculatrix |
GCA_017976295.1_fToxJac2.alt |
SAMN18445299 |
PRJNA717045 |
2021-04-15 |
fish
|
| 30 |
banded killifish (hap2 2024)[IGV] |
Fundulus diaphanus |
GCA_037038625.1_fFunDia1.hap2 |
SAMN39736529 |
PRJNA1072163 |
2024-03-06 |
fish
|
| 31 |
barbel (alternate hap 2022)[IGV] |
Barbus barbus |
GCA_936446605.1_fBarBab1.1_alternate_haplotype |
SAMEA13335783 |
PRJEB52076 |
2022-04-16 |
fish
|
| 32 |
Barn swallow (bHirRus1 v3 alternate hap 2021)[IGV] |
Hirundo rustica |
GCA_015227815.3_bHirRus1.alt.v3 |
SAMN14675488 |
PRJNA636191 |
2021-11-24 |
birds
|
| 33 |
basking shark (sCetMax3.hap2.1 2024)[IGV] |
Cetorhinus maximus |
GCA_964194165.1_sCetMax3.hap2.1 |
SAMEA113902670 |
PRJEB76904 |
2024-06-27 |
sharks
|
| 34 |
bats A.intermedius (hap2 2024)[IGV] |
Artibeus intermedius |
GCA_038363225.1_mArtInt1.hap2 |
SAMN40002248 |
PRJNA1080655 |
2024-04-22 |
mammals
|
| 35 |
bird A.albertisi (hap2 2024)[IGV] |
Aegotheles albertisi |
GCA_039906465.1_bAegAlb1.hap2 |
SAMN41085506 |
PRJNA1104700 |
2024-05-30 |
birds
|
| 36 |
bird E.chinensis (hap1 2024)[IGV] |
Excalfactoria chinensis |
GCA_039878515.1_bCotChi1.hap1 |
SAMN41253798 |
PRJNA1108769 |
2024-05-29 |
birds
|
| 37 |
black and rufous elephant shrew (mRhyPet1hap2 2024)[IGV] |
Rhynchocyon petersi |
GCA_043290065.1_mRhyPet1.hap2 |
SAMN43274963 |
PRJNA1150233 |
2024-10-17 |
mammals
|
| 38 |
black rhinoceros (alternate hap 2021)[IGV] |
Diceros bicornis minor |
GCA_020826835.1_mDicBic1.pat.decon |
SAMN22047685 |
PRJNA773943 |
2021-11-10 |
mammals
|
| 39 |
black-capped chickadee (hap2 2023)[IGV] |
Poecile atricapillus |
GCA_030490855.1_bPoeAtr1.hap2 |
SAMN35074507 |
PRJNA972430 |
2023-07-18 |
birds
|
| 40 |
black-headed gull (Kunming 2023)[IGV] |
Chroicocephalus ridibundus |
GCA_030820635.1_KIZ_Lrid_1.0 |
SAMN36812646 |
PRJNA1001583 |
2023-08-18 |
birds
|
| 41 |
black-legged kittiwake (bRisTri1.mat 2023)[IGV] |
Rissa tridactyla |
GCA_028501385.1_bRisTri1.mat.cur.20221130 |
SAMN32104255 |
PRJNA909854 |
2023-02-10 |
birds
|
| 42 |
blackbelly eelpout (fLycPai1 haplotype 1 2023)[IGV] |
Lycodopsis pacificus |
GCA_028021495.1_fLycPai1.hap1 |
SAMN32629383 |
PRJNA921713 |
2023-01-26 |
fish
|
| 43 |
blackcap (alternate hap 2019)[IGV] |
Sylvia atricapilla |
GCA_009819715.1_bSylAtr1.alt |
SAMN12369542 |
PRJNA558065 |
2019-12-23 |
birds
|
| 44 |
blacktail shiner (hap1 2024)[IGV] |
Cyprinella venusta |
GCA_038021265.1_fCypVen1.hap1 |
SAMN40647018 |
PRJNA1093101 |
2024-04-08 |
fish
|
| 45 |
Blainville's beaked whale (alternate hap 2022)[IGV] |
Mesoplodon densirostris |
GCA_025094165.1_mMesDen1_alternate_haplotype |
SAMN29828597 |
PRJNA873679 |
2022-09-08 |
mammals
|
| 46 |
Blue whale (JJ_BM4_2016_0621 v2 alternate hap 2020)[IGV] |
Balaenoptera musculus |
GCA_008658375.2_mBalMus1.alt.v2 |
SAMN12287136 |
PRJNA554523 |
2020-09-30 |
mammals
|
| 47 |
blue-and-yellow macaw (hap2 2023)[IGV] |
Ara ararauna |
GCA_028858555.1_bAraAra1.hap2 |
SAMN33059336 |
PRJNA931363 |
2023-02-24 |
birds
|
| 48 |
blunt-snouted clingfish (alternate hap)[IGV] |
Gouania willdenowi |
GCA_900650505.1_fGouWil2.1_alternate_haplotype |
SAMEA104026382 |
PRJEB30360 |
2019-02-07 |
fish
|
| 49 |
Boeseman's rainbowfish (fMelBoe1 alternate hap 2021)[IGV] |
Melanotaenia boesemani |
GCA_017639755.1_fMelBoe1.alt |
SAMN12623618 |
PRJNA561966 |
2021-03-30 |
fish
|
| 50 |
bonti-bonti (fTelBon1 alternate hap 2022)[IGV] |
Telmatherina bonti |
GCA_933228925.1_fTelBon1.1_alternate_haplotype |
SAMEA8592627 |
PRJEB51591 |
2022-03-23 |
fish
|
| 51 |
rough bullseye (RE-2024b hap2 2024)[IGV] |
Pempheris klunzingeri |
GCA_042242125.1_fPemKlu1.hap2 |
SAMN40589649 |
PRJNA1090819 |
2024-09-25 |
fish
|
| 52 |
Bornean orangutan (v2 AG05252 alternate hap 2024)[IGV] |
Pongo pygmaeus |
GCA_028885525.2_NHGRI_mPonPyg2-v2.0_alt |
SAMN10521809 |
PRJNA916740 |
2024-01-08 |
primates
|
| 53 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 primary hap 2022)[IGV] |
Thomomys bottae |
GCA_024803745.1_mThoBot1.0.p |
SAMN29044214 |
PRJNA851166 |
2022-09-01 |
mammals
|
| 54 |
Botta's pocket gopher (hap2 2023)[IGV] |
Thomomys bottae |
GCA_031878665.1_mThoBot2.hap2 |
SAMN37300244 |
PRJNA1013537 |
2023-09-25 |
mammals
|
| 55 |
boutu (hap2 2024)[IGV] |
Inia geoffrensis |
GCA_036417475.1_mIniGeo1.hap2 |
SAMN32797734 |
PRJNA925498 |
2024-02-06 |
mammals
|
| 56 |
bowfin (hap2 2024)[IGV] |
Amia calva |
GCA_036365475.1_fAmiCal2.hap2 |
SAMN39643085 |
PRJNA1070664 |
2024-02-06 |
fish
|
| 57 |
Brauer's lanternfish (alternate hap 2023)[IGV] |
Gymnoscopelus braueri |
GCA_963281105.1_fGymBra2.1_alternate_haplotype |
SAMEA12815494 |
PRJEB65069 |
2023-08-20 |
fish
|
| 58 |
Brazilian merganser (hap2 2024)[IGV] |
Mergus octosetaceus |
GCA_036850655.1_bMerOct1.hap2 |
SAMN39710078 |
PRJNA1072165 |
2024-02-26 |
birds
|
| 59 |
Brown anole (rAnoSag1 2024)[IGV] |
Anolis sagrei |
GCA_037176775.1_rAnoSag1.pat |
SAMN40144551 |
PRJNA1080664 |
2024-03-15 |
reptiles
|
| 60 |
budgerigar (paternal hap 2020)[IGV] |
Melopsittacus undulatus |
GCA_012275275.1_bMelUnd1.pat |
SAMN12623090 |
PRJNA561963 |
2020-04-13 |
birds
|
| 61 |
butterfish (fScaArg1 alternate hap 2021)[IGV] |
Scatophagus argus |
GCA_020382915.1_fScaArg1.alt |
SAMN12623616 |
PRJNA749580 |
2021-10-07 |
fish
|
| 62 |
California sea lion (mZalCal1 alternate hap 2020)[IGV] |
Zalophus californianus |
GCA_009762295.2_mZalCal1.alt.v2 |
SAMN12368149 |
PRJNA559674 |
2020-06-12 |
mammals
|
| 63 |
Canada lynx (LIC74 v2 alternate hap 2020)[IGV] |
Lynx canadensis |
GCA_007474575.2_mLynCan4.alt.v2 |
SAMN09948483 |
PRJNA489108 |
2020-06-12 |
mammals
|
| 64 |
Caribbean electric ray (hap1 2024 genbank)[IGV] |
Narcine bancroftii |
GCA_036971445.1_sNarBan1.hap1 |
SAMN39325148 |
PRJNA1063320 |
2024-03-06 |
sharks
|
| 65 |
carmine bee-eater (alternate hap 2019)[IGV] |
Merops nubicus |
GCA_009819585.1_bMerNub1.alt |
SAMN12621035 |
PRJNA561895 |
2019-12-23 |
birds
|
| 66 |
channel bull blenny (alternate hap 2019)[IGV] |
Cottoperca gobio |
GCA_900634435.1_fCotGob3.1_alternate_haplotype |
SAMEA104242975 |
PRJEB30256 |
2019-02-07 |
fish
|
| 67 |
chevron butterflyfish (hap2 2024)[IGV] |
Chaetodon trifascialis |
GCA_039877575.1_fChaTrf1.hap2 |
SAMN41253346 |
PRJNA1108765 |
2024-05-29 |
fish
|
| 68 |
chicken (Cobb bGalGal5 alternate hap 2022)[IGV] |
Gallus gallus |
GCA_027408205.1_bGalGal5.alt |
SAMN28017485 |
PRJNA838371 |
2022-12-27 |
birds
|
| 69 |
chicken (Cobb bGalGal5 primary hap 2022)[IGV] |
Gallus gallus |
GCA_027408225.1_bGalGal5.pri |
SAMN28017485 |
PRJNA838370 |
2022-12-28 |
birds
|
| 70 |
chicken (Huxu 2023)[IGV] |
Gallus gallus |
GCA_024206055.2_GGswu |
SAMN20717417 |
PRJNA693184 |
2023-02-09 |
birds
|
| 71 |
chicken white leghorn layer X broiler (v2 broiler haplotype 2021 2021)[IGV] |
Gallus gallus |
GCF_016699485.2_bGalGal1.mat.broiler.GRCg7b |
SAMN15960293 |
PRJNA660757 |
2021-01-19 |
birds
|
| 72 |
chicken (Ross bGalGal4 alternate hap 2022)[IGV] |
Gallus gallus |
GCA_027408255.1_bGalGal4.alt |
SAMN28017486 |
PRJNA838368 |
2022-12-27 |
birds
|
| 73 |
chicken (Ross bGalGal4 primary hap 2023)[IGV] |
Gallus gallus |
GCA_027557775.1_bGalGal4.pri |
SAMN28017486 |
PRJNA838369 |
2023-01-03 |
birds
|
| 74 |
chimpanzee (v2 AG18354 alternate hap 2024)[IGV] |
Pan troglodytes |
GCA_028858805.2_NHGRI_mPanTro3-v2.0_alt |
SAMN30216104 |
PRJNA916737 |
2024-01-08 |
primates
|
| 75 |
Chinese pangolin (hap2 mManPen7 2023)[IGV] |
Manis pentadactyla |
GCA_030020945.1_mManPen7.hap2 |
SAMN32757332 |
PRJNA924340 |
2023-05-16 |
mammals
|
| 76 |
chub mackerel (fScoJap1 alternate hap 2022)[IGV] |
Scomber japonicus |
GCA_027409835.1_fScoJap1.alt |
SAMN32224830 |
PRJNA912109 |
2022-12-27 |
fish
|
| 77 |
climbing perch (alternate hap 2019)[IGV] |
Anabas testudineus |
GCA_900650485.1_fAnaTes1.2_alternate_haplotype |
SAMEA104026376 |
PRJEB30391 |
2019-02-07 |
fish
|
| 78 |
clouded leopard (mNeoNeb1 alternate hap 2023)[IGV] |
Neofelis nebulosa |
GCA_028018655.1_mNeoNeb1.alt |
SAMN31801981 |
PRJNA915743 |
2023-01-26 |
mammals
|
| 79 |
common blue-tongued skink (hap1 2024)[IGV] |
Tiliqua scincoides |
GCA_035046495.1_rTilSci1.hap1 |
SAMN37319749 |
PRJNA1014189 |
2024-01-04 |
reptiles
|
| 80 |
common bottlenose dolphin (paternal 2020)[IGV] |
Tursiops truncatus |
GCA_011762515.1_mTurTru1.pat |
SAMN12326775 |
PRJNA561884 |
2020-03-25 |
mammals
|
| 81 |
common brushtail (alternate hap 2020)[IGV] |
Trichosurus vulpecula |
GCA_011100645.1_mTriVul1.alt |
SAMN12629507 |
PRJNA562013 |
2020-03-09 |
mammals
|
| 82 |
common buzzard (bButBut1.hap2.1 2024)[IGV] |
Buteo buteo |
GCA_964188375.1_bButBut1.hap2.1 |
SAMEA114594453 |
PRJEB76732 |
2024-06-19 |
birds
|
| 83 |
common cuckoo (bCucCan1 alternate hap 2021)[IGV] |
Cuculus canorus |
GCA_017976305.1_bCucCan1.alt |
SAMN12629508 |
PRJNA562016 |
2021-04-15 |
birds
|
| 84 |
common frog (alternate hap 2021)[IGV] |
Rana temporaria |
GCA_905171725.1_aRanTem1.1_alternate_haplotype |
SAMEA7521635 |
PRJEB42170 |
2021-01-28 |
amphibians
|
| 85 |
common moorhen (bGalChl1.hap2.1 2024)[IGV] |
Gallinula chloropus |
GCA_964237395.1_bGalChl1.hap2.1 |
SAMEA113398958 |
PRJEB79219 |
2024-08-29 |
birds
|
| 86 |
common myna (bArcTri1 alternate hap 2023)[IGV] |
Acridotheres tristis |
GCA_027559525.1_bAcrTri1.alt |
SAMN28454388 |
PRJNA839506 |
2023-01-03 |
birds
|
| 87 |
common pipistrelle (alternate hap 2020)[IGV] |
Pipistrellus pipistrellus |
GCA_903992515.1_mPipPip1.1_alternate_haplotype |
SAMEA994724 |
PRJEB39565 |
2020-08-04 |
mammals
|
| 88 |
common pochard (bAytFer1.hap2.1 2024)[IGV] |
Aythya ferina |
GCA_964211795.1_bAytFer1.hap2.1 |
SAMEA112468034 |
PRJEB78493 |
2024-07-30 |
birds
|
| 89 |
common sole (alternate hap 2023)[IGV] |
Solea solea |
GCA_958295035.1_fSolSol10.1_alternate_haplotype |
SAMEA10984647 |
PRJEB63670 |
2023-07-06 |
fish
|
| 90 |
common swift (bApuApu2 alternate hap 2021)[IGV] |
Apus apus |
GCA_020740585.1_bApuApu2.alt.cur |
SAMN22785356 |
PRJNA776337 |
2021-11-03 |
birds
|
| 91 |
common tern (alternate hap 2019)[IGV] |
Sterna hirundo |
GCA_009819645.1_bSteHir1.alt |
SAMN12369541 |
PRJNA558063 |
2019-12-23 |
birds
|
| 92 |
common toad (alternate hap 2021)[IGV] |
Bufo bufo |
GCA_905171715.1_aBufBuf1.1_alternate_haplotype |
SAMEA7521636 |
PRJEB42169 |
2021-01-28 |
amphibians
|
| 93 |
common vampire bat (HL8 alternate hap 2022)[IGV] |
Desmodus rotundus |
GCA_022682395.1_HLdesRot8B |
SAMN24116476 |
PRJNA789527 |
2022-03-24 |
mammals
|
| 94 |
common vampire bat (HL8 alternate hap 2022)[IGV] |
Desmodus rotundus |
GCA_022682395.2_HLdesRot8B.1 |
SAMN24116476 |
PRJNA789527 |
2022-03-24 |
mammals
|
| 95 |
common wall lizard (hap2 2024)[IGV] |
Podarcis muralis |
GCA_964188365.1_rPodMur119.hap2.1 |
SAMEA115336776 |
PRJEB76736 |
2024-06-19 |
reptiles
|
| 96 |
common whitefish (fCorLav1.hap2.1 2024)[IGV] |
Coregonus lavaretus |
GCA_964263835.1_fCorLav1.hap2.1 |
SAMEA111528661 |
PRJEB80006 |
2024-09-15 |
fish
|
| 97 |
common yellowthroat (alternate hap 2019)[IGV] |
Geothlypis trichas |
GCA_009764545.1_bGeoTri1.alt |
SAMN12631222 |
PRJNA589704 |
2019-12-18 |
birds
|
| 98 |
convict blenny (fPhoLeu1 alternate hap 2021)[IGV] |
Pholidichthys leucotaenia |
GCA_020510965.1_fPhoLeu1.alt |
SAMN12623617 |
PRJNA749576 |
2021-10-15 |
fish
|
| 99 |
copperband butterflyfish (fCheRos1 alternate hap 2021)[IGV] |
Chelmon rostratus |
GCA_017976315.1_fCheRos1.alt |
SAMN12623620 |
PRJNA561970 |
2021-04-15 |
fish
|
| 100 |
corroboree frog (hap1 2023)[IGV] |
Pseudophryne corroboree |
GCA_028390055.1_aPseCor3.hap1 |
SAMN32631236 |
PRJNA921727 |
2023-02-01 |
amphibians
|
| 101 |
Cory's shearwater (bCalBor7.hap2.1 2024)[IGV] |
Calonectris borealis |
GCA_964196065.1_bCalBor7.hap2.1 |
SAMEA114294356 |
PRJEB77029 |
2024-06-30 |
birds
|
| 102 |
Cretan wall lizard (alternate hap 2023)[IGV] |
Podarcis cretensis |
GCA_951804955.1_rPodCre2.1_alternate_haplotype |
SAMEA12110019 |
PRJEB62766 |
2023-06-02 |
reptiles
|
| 103 |
crucian carp (alternate hap 2023)[IGV] |
Carassius carassius |
GCA_963082795.1_fCarCar2.1_alternate_haplotype |
SAMEA11296534 |
PRJEB64836 |
2023-08-08 |
fish
|
| 104 |
cuckoo roller (hap1 2023)[IGV] |
Leptosomus discolor |
GCA_034619455.1_bLepDis1.hap1 |
SAMN37284216 |
PRJNA1013356 |
2023-12-27 |
birds
|
| 105 |
cunner (fTauAds1 alternate hap 2021)[IGV] |
Tautogolabrus adspersus |
GCA_020745675.1_fTauAds1.alt.cur |
SAMN22589422 |
PRJNA774879 |
2021-11-05 |
fish
|
| 106 |
Dalmatian pelican (alternate hap 2023)[IGV] |
Pelecanus crispus |
GCA_030449815.1_bPelCri1.alt |
SAMN35784560 |
PRJNA984932 |
2023-07-13 |
birds
|
| 107 |
Daubenton's bat (alternate hap 2023)[IGV] |
Myotis daubentonii |
GCA_963242275.1_mMyoDau2.1_alternate_haplotype |
SAMEA9921455 |
PRJEB65247 |
2023-08-20 |
mammals
|
| 108 |
denticle herring (alternate hap 2019)[IGV] |
Denticeps clupeoides |
GCA_900700345.2_fDenClu1.1_alternate_haplotype |
SAMEA104129917 |
PRJEB31546 |
2019-03-27 |
fish
|
| 109 |
diamondback terrapin (hap2 rMalTer1 2023)[IGV] |
Malaclemys terrapin pileata |
GCA_027887205.1_rMalTer1.hap2 |
SAMN31394215 |
PRJNA895897 |
2023-01-18 |
reptiles
|
| 110 |
Domestic goose (bAnsAns1.hap2.1 2024)[IGV] |
Anser anser |
GCA_964211785.1_bAnsAns1.hap2.1 |
SAMEA113398854 |
PRJEB78492 |
2024-07-31 |
birds
|
| 111 |
dorado (hap1 2023)[IGV] |
Salminus brasiliensis |
GCA_030448965.1_fSalBra1.hap1 |
SAMN35075251 |
PRJNA972454 |
2023-07-13 |
fish
|
| 112 |
Downy woodpecker (alternate hap 2020)[IGV] |
Dryobates pubescens |
GCA_014839825.1_bDryPub1.alt |
SAMN12629497 |
PRJNA561992 |
2020-09-30 |
birds
|
| 113 |
dugong (hap2 mDugDug1 2023)[IGV] |
Dugong dugon |
GCA_030020955.1_mDugDug1.hap2 |
SAMN33212336 |
PRJNA932821 |
2023-05-16 |
mammals
|
| 114 |
East African grey crowned-crane (alternate hap 2020)[IGV] |
Balearica regulorum gibbericeps |
GCA_011004865.1_bBalReg1.alt |
SAMN12615749 |
PRJNA561891 |
2020-02-24 |
birds
|
| 115 |
eastern narrow-mouthed toad (hap2 2023)[IGV] |
Gastrophryne carolinensis |
GCA_027917415.1_aGasCar1.hap2 |
SAMN31805274 |
PRJNA916749 |
2023-01-18 |
amphibians
|
| 116 |
electric eel (fEleEle1 alternate hap 2020)[IGV] |
Electrophorus electricus |
GCA_013347915.1_fEleEle1.alt |
SAMN12623625 |
PRJNA561982 |
2020-06-12 |
fish
|
| 117 |
emu (hap2 2024)[IGV] |
Dromaius novaehollandiae |
GCA_036417515.1_bDroNov1.hap2 |
SAMN39262816 |
PRJNA1061217 |
2024-02-26 |
birds
|
| 118 |
epaulette shark (alternate hap sHemOce1 2021)[IGV] |
Hemiscyllium ocellatum |
GCA_020745765.1_sHemOce1.mat.decon |
SAMN22550098 |
PRJNA774309 |
2021-11-05 |
sharks
|
| 119 |
ermine (alternate hap 2020)[IGV] |
Mustela erminea |
GCA_009829165.1_mMusErm1.alt |
SAMN12611999 |
PRJNA561930 |
2020-01-03 |
mammals
|
| 120 |
Eurasian badger (2021)[IGV] |
Meles meles |
GCA_922990625.1_mMelMel3.1_maternal_haplotype_uncurated |
SAMEA7524400 |
PRJEB49352 |
2021-12-18 |
mammals
|
| 121 |
Eurasian badger (v3.2 2022)[IGV] |
Meles meles |
GCA_922984935.2_mMelMel3.2_paternal_haplotype |
SAMEA7524400 |
PRJEB49353 |
2022-03-23 |
mammals
|
| 122 |
Eurasian collared-dove (bStrDea1.hap2.1 2024)[IGV] |
Streptopelia decaocto |
GCA_964273585.1_bStrDea1.hap2.1 |
SAMEA113398962 |
PRJEB80768 |
2024-10-04 |
birds
|
| 123 |
Eurasian curlew (hap2 2024)[IGV] |
Numenius arquata |
GCA_964059295.1_bNumArq3.hap2.1 |
SAMEA112693994 |
PRJEB75988 |
2024-05-29 |
birds
|
| 124 |
Eurasian minnow (alternate hap 2023)[IGV] |
Phoxinus phoxinus |
GCA_949152275.1_fPhoPho1.1_alternate_haplotype |
SAMEA11296539 |
PRJEB59821 |
2023-04-09 |
fish
|
| 125 |
Eurasian nightjar (alternate hap 2021)[IGV] |
Caprimulgus europaeus |
GCA_907165095.1_bCapEur3.1_alternate_haplotype |
SAMEA7524394 |
PRJEB44541 |
2021-05-15 |
birds
|
| 126 |
Eurasian red squirrel (alternate hap 2019)[IGV] |
Sciurus vulgaris |
GCA_902685485.1_mSciVul1.1_alternate_haplotype |
SAMEA994733 |
PRJEB35379 |
2019-11-26 |
mammals
|
| 127 |
Eurasian river otter (alternate hap 2019)[IGV] |
Lutra lutra |
GCA_902653095.1_mLutLut1.1_alternate_haplotype |
SAMEA994731 |
PRJEB35338 |
2019-12-09 |
mammals
|
| 128 |
Eurasian water vole (alternate hap 2020)[IGV] |
Arvicola amphibius |
GCA_903992525.1_mArvAmp1.1_alternate_haplotype |
SAMEA994740 |
PRJEB39549 |
2020-08-04 |
mammals
|
| 129 |
European chub (alternate hap 2023)[IGV] |
Squalius cephalus |
GCA_949319155.1_fSquCep2.1_alternate_haplotype |
SAMEA11296547 |
PRJEB60238 |
2023-04-09 |
fish
|
| 130 |
European flounder (alternate hap 2023)[IGV] |
Platichthys flesus |
GCA_949316195.1_fPlaFle2.1_alternate_haplotype |
SAMEA110026475 |
PRJEB60140 |
2023-04-08 |
fish
|
| 131 |
European leaf-toed gecko (hap2 2023)[IGV] |
Euleptes europaea |
GCA_029931755.1_rEulEur1.hap2 |
SAMN32622440 |
PRJNA919167 |
2023-05-03 |
reptiles
|
| 132 |
European mink (alternate hap 2023)[IGV] |
Mustela lutreola |
GCA_030435785.1_mMusLut2.alt |
SAMN35784236 |
PRJNA984927 |
2023-07-11 |
mammals
|
| 133 |
European mole (hap2 2024)[IGV] |
Talpa europaea |
GCA_964194205.1_mTalEur1.hap2.1 |
SAMEA112468127 |
PRJEB76906 |
2024-06-27 |
mammals
|
| 134 |
European plaice (alternate hap 2022)[IGV] |
Pleuronectes platessa |
GCA_947347695.1_fPlePla1.1_alternate_haplotype |
SAMEA13853390 |
PRJEB57576 |
2022-11-27 |
fish
|
| 135 |
European pond turtle (hap2 rEmyOrb1 2023)[IGV] |
Emys orbicularis |
GCA_028017845.1_rEmyOrb1.hap2 |
SAMN31805221 |
PRJNA919101 |
2023-01-26 |
reptiles
|
| 136 |
European robin (alternate hap 2021)[IGV] |
Erithacus rubecula |
GCA_903797565.2_bEriRub2.2_alternate_haplotype |
SAMEA4760689 |
PRJEB38657 |
2021-03-21 |
birds
|
| 137 |
European shag (alternate hap 2023)[IGV] |
Phalacrocorax aristotelis |
GCA_949628205.1_bGulAri2.1_alternate_haplotype |
SAMEA10059652 |
PRJEB60538 |
2023-04-09 |
birds
|
| 138 |
European shrew (alternate hap 2023)[IGV] |
Sorex araneus |
GCA_027595995.1_mSorAra2.alt |
SAMN32477717 |
PRJNA916524 |
2023-01-06 |
mammals
|
| 139 |
European snow vole (alternate hap 2023)[IGV] |
Chionomys nivalis |
GCA_950005115.1_mChiNiv1.1_alternate_haplotype |
SAMEA13217622 |
PRJEB61597 |
2023-04-29 |
mammals
|
| 140 |
European starfish (alternate hap 2019)[IGV] |
Asterias rubens |
GCA_902459445.1_eAstRub1.2_alternate_haplotype |
SAMEA994741 |
PRJEB33973 |
2019-08-16 |
echinoderm
|
| 141 |
European turtle dove (v1.2 alternate hap 2021)[IGV] |
Streptopelia turtur |
GCA_901699165.2_bStrTur1.2_alternate_haplotype |
SAMEA994735 |
PRJEB32725 |
2021-04-15 |
birds
|
| 142 |
European woodmouse (alternate hap 2022)[IGV] |
Apodemus sylvaticus |
GCA_947179525.1_mApoSyl1.1_alternate_haplotype |
SAMEA7702024 |
PRJEB56947 |
2022-11-01 |
mammals
|
| 143 |
Eurpoean golden plover (bPluApr1 alternate hap 2021)[IGV] |
Pluvialis apricaria |
GCA_017639475.1_bPluApr1.alt |
SAMN18353970 |
PRJNA715923 |
2021-03-30 |
birds
|
| 144 |
false killer whale (hap2 2024)[IGV] |
Pseudorca crassidens |
GCA_039906525.1_mPseCra1.hap2 |
SAMN41253811 |
PRJNA1108772 |
2024-05-31 |
mammals
|
| 145 |
Filfola wall lizard (rPodFil1.hap2.1 2024)[IGV] |
Podarcis filfolensis |
GCA_964270875.1_rPodFil1.hap2.1 |
SAMEA113403362 |
PRJEB80629 |
2024-09-30 |
reptiles
|
| 146 |
fire-bellied toad (alternate hap 2023)[IGV] |
Bombina bombina |
GCA_027579415.1_aBomBom1.alt |
SAMN32378350 |
PRJNA915413 |
2023-01-06 |
amphibians
|
| 147 |
Fleay's barred frog (hap2 2024)[IGV] |
Mixophyes fleayi |
GCA_038048865.1_aMixFle1.hap2 |
SAMN39657083 |
PRJNA1071268 |
2024-04-17 |
amphibians
|
| 148 |
flier cichlid (alternate hap MPI-CPG 2019)[IGV] |
Archocentrus centrarchus |
GCA_007364235.1_fArcCen1_v1.h |
SAMN09948522 |
PRJNA489130 |
2019-07-24 |
fish
|
| 149 |
Florida worm lizard (hap1 rRhiFlo1 2023)[IGV] |
Rhineura floridana |
GCA_030035715.1_rRhiFlo1.hap1 |
SAMN34105704 |
PRJNA953089 |
2023-05-16 |
reptiles
|
| 150 |
freshwater garfish (fXenCan1 alternate hap 2020)[IGV] |
Xenentodon cancila |
GCA_014839645.1_fXenCan1.alt |
SAMN12623622 |
PRJNA561974 |
2020-09-30 |
fish
|
| 151 |
Gaboon caecilian (alternate hap 2019)[IGV] |
Geotrypetes seraphini |
GCA_902459495.1_aGeoSer1.1_alternate_haplotype |
SAMEA104387963 |
PRJEB33991 |
2019-08-18 |
amphibians
|
| 152 |
garden warbler (bSylBor1 alternate hap 2020)[IGV] |
Sylvia borin |
GCA_014839765.1_bSylBor1.alt |
SAMN12618613 |
PRJNA561946 |
2020-09-30 |
birds
|
| 153 |
gharial (hap1 2023)[IGV] |
Gavialis gangeticus |
GCA_030020385.1_rGavGan2.hap1 |
SAMN34116453 |
PRJNA953441 |
2023-05-16 |
reptiles
|
| 154 |
giant manta (hap2 2023)[IGV] |
Mobula birostris |
GCA_030035685.1_sMobBir1.hap2 |
SAMN32746370 |
PRJNA924118 |
2023-05-22 |
sharks
|
| 155 |
gilthead seabream (alternate hap 2019)[IGV] |
Sparus aurata |
GCA_900880695.1_fSpaAur1.1_alternate_haplotype |
SAMEA104384835 |
PRJEB31902 |
2019-07-11 |
fish
|
| 156 |
golden eagle (v1.4 alternate hap 2021)[IGV] |
Aquila chrysaetos chrysaetos |
GCA_902153765.2_bAquChr1.4_alternate_haplotype |
SAMEA994725 |
PRJEB33298 |
2021-03-26 |
birds
|
| 157 |
Goodes thornscrub tortoise (Sinaloan alternate hap 2019)[IGV] |
Gopherus evgoodei |
GCA_007399395.1_rGopEvg1_v1.alt |
SAMN03496275 |
PRJNA489104 |
2019-07-24 |
reptiles
|
| 158 |
Grand Cayman blue iguana (hap2 2023)[IGV] |
Cyclura pinguis |
GCA_030412085.1_rCycPin1.hap2 |
SAMN35151422 |
PRJNA973804 |
2023-07-05 |
reptiles
|
| 159 |
gray short-tailed opossum (mMonDom1 alternate hap 2023)[IGV] |
Monodelphis domestica |
GCA_027917375.1_mMonDom1.alt |
SAMN31801966 |
PRJNA915591 |
2023-01-17 |
mammals
|
| 160 |
gray squirrel (alternate hap 2019)[IGV] |
Sciurus carolinensis |
GCA_902685475.1_mSciCar1.1_alternate_haplotype |
SAMEA994726 |
PRJEB35385 |
2019-11-26 |
mammals
|
| 161 |
gray wolf (alternate hap 2021)[IGV] |
Canis lupus |
GCA_905319845.1_mCanLor1.1_alternate_haplotype |
SAMEA7532739 |
PRJEB43199 |
2021-03-21 |
mammals
|
| 162 |
great fruit-eating bat (mArtLit1hap2 2024)[IGV] |
Artibeus lituratus |
GCA_038363175.2_mArtLit1.hap2 |
SAMN40002247 |
PRJNA1080657 |
2024-05-17 |
mammals
|
| 163 |
great potoo (bNycGra1 alternate hap 2020)[IGV] |
Nyctibius grandis |
GCA_013368595.1_bNycGra1.alt |
SAMN12622411 |
PRJNA562021 |
2020-06-23 |
birds
|
| 164 |
great white shark (alternate hap 2021)[IGV] |
Carcharodon carcharias |
GCA_017639455.1_sCarCar2.alt |
SAMN12629504 |
PRJNA562008 |
2021-03-30 |
sharks
|
| 165 |
greater argentine (alternate hap 2023)[IGV] |
Argentina silus |
GCA_951799415.1_fArgSil1.1_alternate_haplotype |
SAMEA110137623 |
PRJEB62528 |
2023-05-27 |
fish
|
| 166 |
greater horseshoe bat (MPI-CBG alternate hap 2019)[IGV] |
Rhinolophus ferrumequinum |
GCA_004115295.1_mRhiFer1_v1.h |
SAMN09948510 |
PRJNA489105 |
2019-01-28 |
mammals
|
| 167 |
greater pipefish (v1 alternate hap 2019)[IGV] |
Syngnathus acus |
GCA_901709685.1_fSynAcu1.1_alternate_haplotype |
SAMEA104381750 |
PRJEB32742 |
2019-06-02 |
fish
|
| 168 |
greater pipefish (v2 2023 genbank)[IGV] |
Syngnathus acus |
GCA_948146105.1_fSynAcu2.1 |
SAMEA13854528 |
PRJEB58844 |
2023-01-18 |
fish
|
| 169 |
greater pipefish (v2 alternate haplotype 2023)[IGV] |
Syngnathus acus |
GCA_948146095.1_fSynAcu2.1_alternate_haplotype |
SAMEA13854528 |
PRJEB58843 |
2023-01-18 |
fish
|
| 170 |
greater sand-eel (alternate hap 2023)[IGV] |
Hyperoplus immaculatus |
GCA_949358355.1_fHypImm3.1_alternate_haplotype |
SAMEA13854416 |
PRJEB60327 |
2023-04-09 |
fish
|
| 171 |
green sea turtle (v2 alternate hap 2021)[IGV] |
Chelonia mydas |
GCA_015220195.2_rCheMyd1.alt.v2 |
SAMN12612360 |
PRJNA561942 |
2021-07-15 |
reptiles
|
| 172 |
grey whale (mEscRob2 alternate hap 2023)[IGV] |
Eschrichtius robustus |
GCA_028021475.1_mEscRob2.alt |
SAMN32629250 |
PRJNA921703 |
2023-01-26 |
mammals
|
| 173 |
gudgeon (alternate hap 2023)[IGV] |
Gobio gobio |
GCA_949357705.1_fGobGob1.1_alternate_haplotype |
SAMEA11296538 |
PRJEB60323 |
2023-04-09 |
fish
|
| 174 |
gyrfalcon (bFalRus1 alternate hap 2020)[IGV] |
Falco rusticolus |
GCA_015220155.1_bFalRus1.alt |
SAMN12629496 |
PRJNA561989 |
2020-11-02 |
birds
|
| 175 |
Harpy eagle (bHarHar1 alternate hap 2022)[IGV] |
Harpia harpyja |
GCA_026419925.1_bHarHar1 |
SAMN31530492 |
PRJNA896140 |
2022-11-25 |
birds
|
| 176 |
Hawaiian crow (bCorHaw1 alternate hap 2021)[IGV] |
Corvus hawaiiensis |
GCA_020740675.1_bCorHaw1.alt.cur |
SAMN22550278 |
PRJNA774316 |
2021-11-03 |
birds
|
| 177 |
hazel dormouse (alternate hap 2023)[IGV] |
Muscardinus avellanarius |
GCA_963383665.1_mMusAve1.1_alternate_haplotype |
SAMEA110180654 |
PRJEB65339 |
2023-08-27 |
mammals
|
| 178 |
hemichordates Saccoglossus (HW-2024a hap2 2024)[IGV] |
Saccoglossus sp. HW-2024a |
GCA_040954595.1_ASM4095459v1 |
SAMN40579982 |
PRJNA1090635 |
2024-08-01 |
invertebrate
|
| 179 |
hippopotamus (mHipAmp2 hap1 2023)[IGV] |
Hippopotamus amphibius kiboko |
GCA_030028035.1_mHipAmp2.hap1 |
SAMN33342074 |
PRJNA936167 |
2023-05-17 |
mammals
|
| 180 |
hoatzin (hap2 2023)[IGV] |
Opisthocomus hoazin |
GCA_030867165.1_bOpiHoa1.hap2 |
SAMN37055462 |
PRJNA1007257 |
2023-08-24 |
birds
|
| 181 |
honeycomb rockfish (fSebUmb1 alternate hap 2020)[IGV] |
Sebastes umbrosus |
GCA_015220095.1_fSebUmb1.alt |
SAMN12629503 |
PRJNA562006 |
2020-11-02 |
fish
|
| 182 |
horn shark (hap1 2024)[IGV] |
Heterodontus francisci |
GCA_036365525.1_sHetFra1.hap1 |
SAMN39432692 |
PRJNA1064416 |
2024-02-06 |
sharks
|
| 183 |
horse (maternal 2024)[IGV] |
Equus caballus |
GCA_036418255.1_mEquCab1.mat |
SAMN39296386 |
PRJNA1064425 |
2024-02-07 |
mammals
|
| 184 |
hourglass treefrog (maternal 2023 genbank)[IGV] |
Dendropsophus ebraccatus |
GCA_027789725.1_aDenEbr1.mat |
SAMN32145295 |
PRJNA910818 |
2023-01-13 |
amphibians
|
| 185 |
house finch (bHaeMex1 alternate hap 2022)[IGV] |
Haemorhous mexicanus |
GCA_027406555.1_bHaeMex1.alt |
SAMN28453576 |
PRJNA839498 |
2022-12-27 |
birds
|
| 186 |
house mouse (alternate hap 2023)[IGV] |
Mus musculus |
GCA_949316305.1_mMusMuc1.1_alternate_haplotype |
SAMEA112251260 |
PRJEB60145 |
2023-04-08 |
mammals
|
| 187 |
house sparrow (hap2 2024)[IGV] |
Passer domesticus |
GCA_036417895.1_bPasDom1.hap2 |
SAMN39255856 |
PRJNA1064420 |
2024-02-07 |
birds
|
| 188 |
human (mHomSap3 WGS:JACSEX01 2021)[IGV] |
Homo sapiens |
GCA_016695395.2_mHomSap3.mat |
SAMN12568975 |
PRJNA562023 |
2021-01-19 |
primates
|
| 189 |
human (WGS:JACSEW01 2021 alternate hap)[IGV] |
Homo sapiens |
GCA_016700455.2_mHomSap3.pat |
SAMN12568975 |
PRJNA562022 |
2021-01-19 |
primates
|
| 190 |
Humboldt's penguin (bSphHub1 alternate hap 2022)[IGV] |
Spheniscus humboldti |
GCA_027474345.1_bSphHub1.alt |
SAMN28408465 |
PRJNA838344 |
2022-12-27 |
birds
|
| 191 |
hybrid cattle (Angus x Brahman F1 Angus haplotype 2018)[IGV] |
Bos indicus x Bos taurus |
GCA_003369685.2_UOA_Angus_1 |
SAMN08473802 |
PRJNA432857 |
2018-11-30 |
mammals
|
| 192 |
Indian glassy fish (alternate hap 2019)[IGV] |
Parambassis ranga |
GCA_900651595.1_fParRan2.1_alternate_haplotype |
SAMEA4675621 |
PRJEB30258 |
2019-02-12 |
fish
|
| 193 |
Indo-Pacific tarpon (alternate hap 2020)[IGV] |
Megalops cyprinoides |
GCA_013368575.1_fMegCyp1.alt |
SAMN12623619 |
PRJNA561968 |
2020-06-23 |
fish
|
| 194 |
Italian wall lizard (rPodSic1.hap2.1 2024)[IGV] |
Podarcis siculus |
GCA_964188395.1_rPodSic1.hap2.1 |
SAMEA115336774 |
PRJEB76731 |
2024-06-19 |
reptiles
|
| 195 |
Japanese sawshark (hap2 2024)[IGV] |
Pristiophorus japonicus |
GCA_044704965.1_sPriJap1.hap2 |
SAMN44116980 |
PRJNA1170978 |
2024-11-13 |
sharks
|
| 196 |
jewelled blenny (alternate hap 2019)[IGV] |
Salarias fasciatus |
GCA_902148835.1_fSalaFa1.1_alternate_haplotype |
SAMEA4966329 |
PRJEB33183 |
2019-07-03 |
fish
|
| 197 |
John dory (alternate hap 2023)[IGV] |
Zeus faber |
GCA_960530785.1_fZeuFab8.1_alternate_haplotype |
SAMEA111562156 |
PRJEB64532 |
2023-07-26 |
fish
|
| 198 |
kagu (bRhyJub1 alternate hap 2023)[IGV] |
Rhynochetos jubatus |
GCA_027595965.1_bRhyJub1.alt |
SAMN31802033 |
PRJNA916496 |
2023-01-06 |
birds
|
| 199 |
kakapo (Jane alternate hap 2019)[IGV] |
Strigops habroptila |
GCA_004011185.1_bStrHab1_v1.h |
SAMN09948751 |
PRJNA489134 |
2019-01-10 |
birds
|
| 200 |
killer whale (alternate hap 2022)[IGV] |
Orcinus orca |
GCA_937001455.1_mOrcOrc1.1_alternate_haplotype |
SAMEA8800229 |
PRJEB52132 |
2022-05-01 |
mammals
|
| 201 |
king vulture (hap2 2024)[IGV] |
Sarcoramphus papa |
GCA_037950955.1_bSarPap1.hap2 |
SAMN40647026 |
PRJNA1093107 |
2024-04-04 |
birds
|
| 202 |
Korean giant-fin mudskipper (v1 alternate hap 2020 genbank)[IGV] |
Periophthalmus magnuspinnatus |
GCA_009829135.1_fPerMag1.alt |
SAMN12629500 |
PRJNA561999 |
2020-01-03 |
fish
|
| 203 |
lammergeier (bGypBar2 alternate hap 2023)[IGV] |
Gypaetus barbatus |
GCA_028017155.1_bGypBar2.alt |
SAMN32256411 |
PRJNA912842 |
2023-01-26 |
birds
|
| 204 |
lance-tailed manakin (alternate hap 2020)[IGV] |
Chiroxiphia lanceolata |
GCA_009829205.1_bChiLan1.alt |
SAMN12620979 |
PRJNA561944 |
2020-01-03 |
birds
|
| 205 |
lanner falcon (bFalBia1 alternate hap 2022)[IGV] |
Falco biarmicus |
GCA_023634305.1_bFalBia1.alt |
SAMN28688289 |
PRJNA842827 |
2022-06-01 |
birds
|
| 206 |
large-eye snaggletooth (alternate hap 2023)[IGV] |
Borostomias antarcticus |
GCA_949987545.1_fBorAnt1.1_alternate_haplotype |
SAMEA8748812 |
PRJEB61590 |
2023-04-29 |
fish
|
| 207 |
largescale foureyes (fAnaAna1 alternate hap 2020)[IGV] |
Anableps anableps |
GCA_014839705.1_fAnaAna1.alt |
SAMN12623628 |
PRJNA561986 |
2020-09-30 |
fish
|
| 208 |
Lataste's viper (alternate hap 2022)[IGV] |
Vipera latastei |
GCA_024294605.1_rVipLat1.alt |
SAMN28408464 |
PRJNA838199 |
2022-07-16 |
reptiles
|
| 209 |
leatherback sea turtle (v2 alternate hap 2020)[IGV] |
Dermochelys coriacea |
GCA_009762595.2_rDerCor1.alt.v2 |
SAMN12629498 |
PRJNA561994 |
2020-12-08 |
reptiles
|
| 210 |
lesser Egyptian jerboa (alternate hap 2021)[IGV] |
Jaculus jaculus |
GCA_020740715.1_mJacJac1.pat.decon |
SAMN20391724 |
PRJNA773798 |
2021-11-03 |
mammals
|
| 211 |
lesser horseshoe bat (hap2 2024)[IGV] |
Rhinolophus hipposideros |
GCA_964194215.1_mRhiHip2.hap2.1 |
SAMEA113980802 |
PRJEB76909 |
2024-06-27 |
mammals
|
| 212 |
lesser kestrel (alternate hap 2021)[IGV] |
Falco naumanni |
GCA_017639645.1_bFalNau1.mat |
SAMN16870685 |
PRJNA702665 |
2021-03-30 |
birds
|
| 213 |
lesser noctule (mNycLei1.hap2.1 2024)[IGV] |
Nyctalus leisleri |
GCA_964264895.1_mNycLei1.hap2.1 |
SAMEA114250308 |
PRJEB80300 |
2024-09-21 |
mammals
|
| 214 |
lesser rhea (bPtePen1 alternate hap 2023)[IGV] |
Rhea pennata |
GCA_028389885.1_bPtePen1.alt |
SAMN32606345 |
PRJNA918802 |
2023-02-01 |
birds
|
| 215 |
lesser salmon catfish (fNeoGra1 alternate hap 2023)[IGV] |
Neoarius graeffei |
GCA_027579805.1_fNeoGra1.alt |
SAMN28453209 |
PRJNA839495 |
2023-01-06 |
fish
|
| 216 |
lesser sand-eel (alternate hap 2023)[IGV] |
Ammodytes marinus |
GCA_950004245.1_fAmmMar1.1_alternate_haplotype |
SAMEA110137622 |
PRJEB61583 |
2023-04-29 |
fish
|
| 217 |
limp eelpout (alternate hap 2023)[IGV] |
Melanostigma gelatinosum |
GCA_949748265.1_fMelGel1.1_alternate_haplotype |
SAMEA12815492 |
PRJEB60806 |
2023-04-08 |
fish
|
| 218 |
live sharksucker (alternate hap 2019)[IGV] |
Echeneis naucrates |
GCA_900963505.1_fEcheNa1.1_alternate_haplotype |
SAMEA4966390 |
PRJEB31993 |
2019-04-11 |
fish
|
| 219 |
lizards P.bocagei (rPodBoc1.hap2.1 2024)[IGV] |
Podarcis bocagei |
GCA_964188325.1_rPodBoc1.hap2.1 |
SAMEA115336769 |
PRJEB76739 |
2024-06-21 |
reptiles
|
| 220 |
lizards P.erhardii (rPodErh1.hap2.1 2024)[IGV] |
Podarcis erhardii |
GCA_964251985.1_rPodErh1.hap2.1 |
SAMEA115336771 |
PRJEB79340 |
2024-08-29 |
reptiles
|
| 221 |
lizards P.melisellensis (rPodMel1.hap2.1 2024)[IGV] |
Podarcis melisellensis |
GCA_964234825.1_rPodMel1.hap2.1 |
SAMEA115336775 |
PRJEB79072 |
2024-08-31 |
reptiles
|
| 222 |
lizards P.pityusensis (rPodPit1.hap2.2 2024)[IGV] |
Podarcis pityusensis |
GCA_964106635.2_rPodPit1.hap2.2 |
SAMEA114217797 |
PRJEB76013 |
2024-07-05 |
reptiles
|
| 223 |
long-tailed hermit (PSU5 alternate hap 2022)[IGV] |
Phaethornis superciliosus |
GCA_023637925.1_DD_ASM_B1a |
SAMN23532249 |
PRJNA785156 |
2022-06-01 |
birds
|
| 224 |
longspined bullhead (fTauBub2.1 alternate hap 2021)[IGV] |
Taurulus bubalis |
GCA_910589325.1_fTauBub2.1_alternate_haplotype |
SAMEA7522994 |
PRJEB45316 |
2021-07-07 |
fish
|
| 225 |
lumpfish (alternate hap 2019)[IGV] |
Cyclopterus lumpus |
GCA_009769515.1_fCycLum1.alt |
SAMN12629502 |
PRJNA562004 |
2019-12-19 |
fish
|
| 226 |
lumpfish (primary hap v2.1 2023 genbank)[IGV] |
Cyclopterus lumpus |
GCA_963457625.1_fCycLum2.1 |
SAMEA112789128 |
PRJEB66140 |
2023-09-20 |
fish
|
| 227 |
Macqueen's bustard (paternal 2024)[IGV] |
Chlamydotis macqueenii |
GCA_036418225.1_bChlMac1.pat |
SAMN39296383 |
PRJNA1064423 |
2024-02-07 |
birds
|
| 228 |
maguari stork (bCicMag1 alternate hap 2021)[IGV] |
Ciconia maguari |
GCA_017639665.1_bCicMag1.alt |
SAMN18353822 |
PRJNA715732 |
2021-03-30 |
birds
|
| 229 |
mallard (hap2 2024)[IGV] |
Anas platyrhynchos |
GCA_964188335.1_bAnaPla2.hap2.1 |
SAMEA113398833 |
PRJEB76741 |
2024-06-19 |
birds
|
| 230 |
marbled rockcod (alternate hap 2023)[IGV] |
Notothenia rossii |
GCA_949606865.1_fNotRos5.1_alternate_haplotype |
SAMEA12815441 |
PRJEB60488 |
2023-04-09 |
fish
|
| 231 |
Mauritius kestrel (alternate hap 2023)[IGV] |
Falco punctatus |
GCA_963210275.1_bFalPun1.1_alternate_haplotype |
SAMEA14356472 |
PRJEB65027 |
2023-08-19 |
birds
|
| 232 |
Mauritius parakeet (alternate hap 2023)[IGV] |
Psittacula echo |
GCA_963243765.1_bPsiEch3.1_alternate_haplotype |
SAMEA12361725 |
PRJEB65272 |
2023-08-20 |
birds
|
| 233 |
meadow viper (alternate hap 2022)[IGV] |
Vipera ursinii |
GCA_947247025.1_rVipUrs1.1_alternate_haplotype |
SAMEA12832258 |
PRJEB57182 |
2022-10-30 |
reptiles
|
| 234 |
meadow vole (hap2 2024)[IGV] |
Microtus pennsylvanicus |
GCA_037039175.1_mMicPen1.hap2 |
SAMN39894136 |
PRJNA1074850 |
2024-03-06 |
mammals
|
| 235 |
Merriam's long-tongued bat (hap2 2024)[IGV] |
Glossophaga mutica |
GCA_039656995.1_mGloMut1.hap2 |
SAMN40946060 |
PRJNA1099663 |
2024-05-17 |
mammals
|
| 236 |
Mexican burrowing toad (hap2 2024)[IGV] |
Rhinophrynus dorsalis |
GCA_037306015.1_aRhiDor1.hap2 |
SAMN40302865 |
PRJNA1085475 |
2024-03-20 |
amphibians
|
| 237 |
Mexican gopher tortoise (WGS:JAMKFD01 2022)[IGV] |
Gopherus flavomarginatus |
GCA_025201965.1_rGopFla2.pat.asm |
SAMN24199108 |
PRJNA794189 |
2022-09-08 |
reptiles
|
| 238 |
milkfish (alternate hap 2019)[IGV] |
Chanos chanos |
GCA_902362175.1_fChaCha1.1_alternate_haplotype |
SAMEA5159473 |
PRJEB33881 |
2019-08-16 |
fish
|
| 239 |
minke whale (alternate hap 2023)[IGV] |
Balaenoptera acutorostrata |
GCA_950005055.1_mBalAcu1.1_alternate_haplotype |
SAMEA111380540 |
PRJEB61580 |
2023-04-29 |
mammals
|
| 240 |
monito del monte (mDroGli1 alternate hap 2021)[IGV] |
Dromiciops gliroides |
GCA_019395325.1_mDroGli1.alt |
SAMN18857598 |
PRJNA728142 |
2021-07-29 |
mammals
|
| 241 |
mute swan (bCygOlo1 v2 alternate hap 2021)[IGV] |
Cygnus olor |
GCA_009769485.2_bCygOlo1.alt.v2 |
SAMN12621369 |
PRJNA561961 |
2021-03-30 |
birds
|
| 242 |
Natterer's bat (mMyoNat1.hap2.1 2024)[IGV] |
Myotis nattereri |
GCA_964212025.1_mMyoNat1.hap2.1 |
SAMEA114614248 |
PRJEB78591 |
2024-08-02 |
mammals
|
| 243 |
Nelson's sparrow (bAmmNel1 alternate hap 2023)[IGV] |
Ammospiza nelsoni |
GCA_027579665.1_bAmmNel1.alt |
SAMN28421656 |
PRJNA839457 |
2023-01-06 |
birds
|
| 244 |
New Caledonian crow (alternate hap 2019)[IGV] |
Corvus moneduloides |
GCA_009651025.1_bCorMon1.alt |
SAMN12368441 |
PRJNA560982 |
2019-11-12 |
birds
|
| 245 |
New Zealand spotty (alternate hap 2019 genbank)[IGV] |
Notolabrus celidotus |
GCA_009762545.1_fNotCel1.alt |
SAMN12623201 |
PRJNA561957 |
2019-12-17 |
fish
|
| 246 |
Nicobar pigeon (hap2 2024)[IGV] |
Caloenas nicobarica |
GCA_036010745.1_bCalNic1.hap2 |
SAMN39256628 |
PRJNA1061159 |
2024-01-24 |
birds
|
| 247 |
nine-banded armadillo (mDasNov1 hap1 2023)[IGV] |
Dasypus novemcinctus |
GCA_030445055.1_mDasNov1.hap1 |
SAMN32738980 |
PRJNA923799 |
2023-07-13 |
mammals
|
| 248 |
nine-banded armadillo (mDasNov1 hap1 2023)[IGV] |
Dasypus novemcinctus |
GCA_030445055.2_mDasNov1.1.hap1 |
SAMN32738980 |
PRJNA923799 |
2023-07-13 |
mammals
|
| 249 |
ninespine stickleback (alternate hap 2023)[IGV] |
Pungitius pungitius |
GCA_949316245.1_fPunPun2.1_alternate_haplotype |
SAMEA11296545 |
PRJEB60135 |
2023-04-08 |
fish
|
| 250 |
North American porcupine (mEreDor1 alternate hap 2023)[IGV] |
Erethizon dorsatum |
GCA_028500835.1_mEreDor1.alt |
SAMN32359106 |
PRJNA915122 |
2023-02-03 |
mammals
|
| 251 |
North Atlantic right whale (hap1 2023)[IGV] |
Eubalaena glacialis |
GCA_028571275.1_mEubGla1.hap1 |
SAMN32746534 |
PRJNA924127 |
2023-02-09 |
mammals
|
| 252 |
North Atlantic right whale (hap2 2023 genbank)[IGV] |
Eubalaena glacialis |
GCA_028564815.1_mEubGla1.hap2 |
SAMN32746534 |
PRJNA924128 |
2023-02-09 |
mammals
|
| 253 |
North Island brown kiwi (hap2 2024)[IGV] |
Apteryx mantelli |
GCA_036417975.1_bAptMan1.hap2 |
SAMN39257886 |
PRJNA1061175 |
2024-02-06 |
birds
|
| 254 |
northern bat (alternate hap 2023)[IGV] |
Eptesicus nilssonii |
GCA_951640545.1_mEptNil1.1_alternate_haplotype |
SAMEA14098186 |
PRJEB62201 |
2023-05-18 |
mammals
|
| 255 |
northern black mastiff bat (mMolNig1hap2 2024)[IGV] |
Molossus nigricans |
GCA_039880925.1_mMolNig1.hap2 |
SAMN40002246 |
PRJNA1093104 |
2024-05-29 |
mammals
|
| 256 |
northern bottlenose whale (alternate hap 2023)[IGV] |
Hyperoodon ampullatus |
GCA_949752845.1_mHypAmp2.1_alternate_haplotype |
SAMEA10839125 |
PRJEB60894 |
2023-04-09 |
mammals
|
| 257 |
northern gannet (hap1 2023)[IGV] |
Morus bassanus |
GCA_031468805.1_bMorBas2.hap1 |
SAMN37096299 |
PRJNA1009680 |
2023-09-15 |
birds
|
| 258 |
northern goshawk (bAccGen1 v1 alternate hap 2022)[IGV] |
Accipiter gentilis |
GCA_929447715.1_bAccGen1.1_alternate_haplotype |
SAMEA8235650 |
PRJEB50703 |
2022-02-13 |
birds
|
| 259 |
northern pike (alternate hap 2020)[IGV] |
Esox lucius |
GCA_011004835.1_fEsoLuc1.alt |
SAMN12623624 |
PRJNA561978 |
2020-02-24 |
fish
|
| 260 |
Norway rat BN7 haplotype[IGV] |
Rattus norvegicus |
GCA_015244455.1_mRatBN7.1_alternate_haplotype |
SAMN16261960 |
PRJNA663241 |
2020-11-04 |
mammals
|
| 261 |
olive python (hap2 2023)[IGV] |
Liasis olivaceus |
GCA_030867085.1_rLiaOli1.hap2 |
SAMN32739907 |
PRJNA923813 |
2023-08-24 |
reptiles
|
| 262 |
orange-tipped seq squirt (alternate hap 2023)[IGV] |
Corella eumyota |
GCA_963082865.1_kaCorEumy4.1_alternate_haplotype |
SAMEA7536466 |
PRJEB64847 |
2023-08-08 |
otherChordates
|
| 263 |
orbiculate cardinalfish (alternate hap 2019)[IGV] |
Sphaeramia orbicularis |
GCA_902148825.1_fSphaOr1.1_alternate_haplotype |
SAMEA4966328 |
PRJEB33176 |
2019-07-03 |
fish
|
| 264 |
painted frog (alternate hap 2022)[IGV] |
Discoglossus pictus |
GCA_027410455.1_aDisPic1.alt |
SAMN32227109 |
PRJNA912128 |
2022-12-27 |
amphibians
|
| 265 |
pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 alternate hap 2020)[IGV] |
Phyllostomus discolor |
GCA_004115245.2_mPhyDis1.alti.v3 |
SAMN09948786 |
PRJNA489142 |
2020-05-11 |
mammals
|
| 266 |
Papuan ground boa (hap1 2024)[IGV] |
Candoia aspera |
GCA_035125265.1_rCanAsp1.hap1 |
SAMN37159891 |
PRJNA1009781 |
2024-01-05 |
reptiles
|
| 267 |
parallel lanternfish (alternate hap 2024)[IGV] |
Protomyctophum parallelum |
GCA_964188415.1_fProPar1.1_alternate_haplotype |
SAMEA12815440 |
PRJEB76808 |
2024-06-21 |
fish
|
| 268 |
peladilla (fAplTae1 alternate hap 2021)[IGV] |
Aplochiton taeniatus |
GCA_017639685.1_fAplTae1.alt |
SAMN12623621 |
PRJNA561972 |
2021-03-30 |
fish
|
| 269 |
peregrine falcon (bFalPer1 alternate hap 2022)[IGV] |
Falco peregrinus |
GCA_023634185.1_bFalPer1.alt |
SAMN28688290 |
PRJNA842833 |
2022-06-01 |
birds
|
| 270 |
Peter's clawed frog (aXenPet1 2024)[IGV] |
Xenopus petersii |
GCA_038501915.1_aXenPet1.maternal.cur |
SAMN39187339 |
PRJNA1058703 |
2024-04-29 |
amphibians
|
| 271 |
Philippine flying lemur (mCynVol1 alternate hap 2022)[IGV] |
Cynocephalus volans |
GCA_027409165.1_mCynVol1.alt |
SAMN32206947 |
PRJNA911845 |
2022-12-27 |
mammals
|
| 272 |
pig-tailed macaque (mMacNem1hap2 2024)[IGV] |
Macaca nemestrina |
GCA_043161795.1_mMacNem.hap2 |
SAMN41827875 |
PRJNA1123829 |
2024-10-15 |
mammals
|
| 273 |
pinecone soldierfish (alternate hap 2019)[IGV] |
Myripristis murdjan |
GCA_902148815.1_fMyrMur1.1_alternate_haplotype |
SAMEA4872133 |
PRJEB33187 |
2019-07-03 |
fish
|
| 274 |
pink pigeon (alternate hap 2023)[IGV] |
Nesoenas mayeri |
GCA_963082445.1_bNesMay2.1_alternate_haplotype |
SAMEA12922160 |
PRJEB64782 |
2023-08-08 |
birds
|
| 275 |
plains spadefoot toad (alternate hap 2022)[IGV] |
Spea bombifrons |
GCA_027382365.2_aSpeBom1.2.alt |
SAMN28408467 |
PRJNA838346 |
2022-12-27 |
amphibians
|
| 276 |
platypus (alternate hap Pmale09 2020)[IGV] |
Ornithorhynchus anatinus |
GCA_004115175.2_mOrnAna1.alt.v3 |
SAMN08537700 |
PRJNA489115 |
2020-04-06 |
mammals
|
| 277 |
plumbeous ibis (bTheCae1 alternate hap 2021)[IGV] |
Theristicus caerulescens |
GCA_020745805.1_bTheCae1.alt.cur |
SAMN22550094 |
PRJNA774321 |
2021-11-05 |
birds
|
| 278 |
pollack (alternate hap 2023)[IGV] |
Pollachius pollachius |
GCA_949987605.1_fPolPol2.1_alternate_haplotype |
SAMEA111562038 |
PRJEB61574 |
2023-04-29 |
fish
|
| 279 |
prehistoric monster fish (alternate hap 2019)[IGV] |
Thalassophryne amazonica |
GCA_902500245.1_fThaAma1.1_alternate_haplotype |
SAMEA104129913 |
PRJEB34605 |
2019-09-30 |
fish
|
| 280 |
proboscis bat (hap2 2024)[IGV] |
Rhynchonycteris naso |
GCA_037038555.1_mRhyNas2.hap2 |
SAMN39947078 |
PRJNA1076652 |
2024-03-06 |
mammals
|
| 281 |
Puerto Rican coqui (hap2 2024)[IGV] |
Eleutherodactylus coqui |
GCA_035609135.1_aEleCoq1.hap2 |
SAMN39150572 |
PRJNA1057918 |
2024-01-12 |
amphibians
|
| 282 |
pygmy chimpanzee (paternal 2024)[IGV] |
Pan paniscus |
GCA_028858825.2_NHGRI_mPanPan1-v2.0_pat |
SAMN13935689 |
PRJNA916734 |
2024-01-05 |
primates
|
| 283 |
pygmy sperm whale (mKogBre1 haplotype 2 2022)[IGV] |
Kogia breviceps |
GCA_026419985.1_mKogBre1_haplotype_2 |
SAMN31719513 |
PRJNA901931 |
2022-11-27 |
mammals
|
| 284 |
razorbill (alternate hap 2006_11_07_Graehlm_vinge_78 2019)[IGV] |
Alca torda |
GCA_008658355.1_bAlcTor1_alternate |
SAMN12292087 |
PRJNA554521 |
2019-09-23 |
birds
|
| 285 |
red deer (alternate hap 2021)[IGV] |
Cervus elaphus |
GCA_910593805.1_mCerEla1.1_alternate_haplotype |
SAMEA7523520 |
PRJEB45837 |
2021-07-07 |
mammals
|
| 286 |
red fox (hap2 2024)[IGV] |
Vulpes vulpes |
GCA_964106925.2_mVulVul1.hap2.2 |
SAMEA113398840 |
PRJEB75989 |
2024-06-27 |
mammals
|
| 287 |
red-bellied piranha (fPygNat1 alternate hap 2020)[IGV] |
Pygocentrus nattereri |
GCA_015220065.1_fPygNat1.alt |
SAMN12623623 |
PRJNA561976 |
2020-11-02 |
fish
|
| 288 |
red-billed tropicbird (paternal hap 2024)[IGV] |
Phaethon aethereus |
GCA_964289755.1_bPhaAeh10.paternal.1 |
SAMEA8228673 |
PRJEB81453 |
2024-10-25 |
birds
|
| 289 |
red-crested turaco (alternate hap 2019)[IGV] |
Tauraco erythrolophus |
GCA_009764505.1_bTauEry1.alt |
SAMN12621036 |
PRJNA561948 |
2019-12-18 |
birds
|
| 290 |
red-fronted tinkerbird (bPogPus1 alternate hap 2020)[IGV] |
Pogoniulus pusillus |
GCA_015220175.1_bPogPus1.alt |
SAMN15098508 |
PRJNA637954 |
2020-11-02 |
birds
|
| 291 |
red-legged seriema (alternate hap 2019)[IGV] |
Cariama cristata |
GCA_009819485.1_bCarCri1.alt |
SAMN12614807 |
PRJNA561893 |
2019-12-23 |
birds
|
| 292 |
red-throated loon (hap1 2023)[IGV] |
Gavia stellata |
GCA_030936125.1_bGavSte3.hap1 |
SAMN37096312 |
PRJNA1008846 |
2023-08-30 |
birds
|
| 293 |
red-throated loon (hap2 2023 genbank)[IGV] |
Gavia stellata |
GCA_030936135.1_bGavSte3.hap2 |
SAMN37096312 |
PRJNA1008847 |
2023-08-30 |
birds
|
| 294 |
reedfish (v3 alternate hap 2021)[IGV] |
Erpetoichthys calabaricus |
GCA_900700845.3_fErpCal1.3_alternate_haplotype |
SAMEA104026374 |
PRJEB31582 |
2021-07-07 |
fish
|
| 295 |
Rice's whale (hap1 2023)[IGV] |
Balaenoptera ricei |
GCA_028017805.1_mBalRic1.hap1 |
SAMN32629060 |
PRJNA921697 |
2023-01-26 |
mammals
|
| 296 |
Rice's whale (hap2 2023 genbank)[IGV] |
Balaenoptera ricei |
GCA_028023285.1_mBalRic1.hap2 |
SAMN32629060 |
PRJNA921698 |
2023-01-30 |
mammals
|
| 297 |
rifleman (bAcaChl1 alternate hap 2021)[IGV] |
Acanthisitta chloris |
GCA_016880875.1_bAcaChl1.alt |
SAMN16442762 |
PRJNA561955 |
2021-02-10 |
birds
|
| 298 |
Riggenbach's reed frog (aHypRig1 alternate hap 2024)[IGV] |
Hyperolius riggenbachi |
GCA_040937895.1_aHypRig1.alt |
SAMN42123895 |
PRJNA1129094 |
2024-07-25 |
amphibians
|
| 299 |
ring-tailed lemur (mLemCat1 alternate hap 2021)[IGV] |
Lemur catta |
GCA_020740595.1_mLemCat1.alt |
SAMN12621102 |
PRJNA561950 |
2021-11-03 |
primates
|
| 300 |
roach minnow (alternate hap 2023)[IGV] |
Rutilus rutilus |
GCA_951802655.1_fRutRut2.1_alternate_haplotype |
SAMEA11296543 |
PRJEB62671 |
2023-05-29 |
fish
|
| 301 |
rock gunnel (alternate hap 2021)[IGV] |
Pholis gunnellus |
GCA_910591705.2_fPhoGun1.2_alternate_haplotype |
SAMEA7522838 |
PRJEB45448 |
2021-11-18 |
fish
|
| 302 |
rock pigeon (racing homer bColLiv1 2024)[IGV] |
Columba livia |
GCA_036010775.2_bColLiv1.mat.v2 |
SAMN38891892 |
PRJNA1054132 |
2024-04-08 |
birds
|
| 303 |
rock pigeon (racing homer maternal 2024)[IGV] |
Columba livia |
GCA_036010775.1_bColLiv1.mat |
SAMN38891892 |
PRJNA1054132 |
2024-02-06 |
birds
|
| 304 |
rock ptarmigan (bLagMut1 alternate hap 2022)[IGV] |
Lagopus muta |
GCA_023344045.1_bLagMut1_alternate |
SAMN25144835 |
PRJNA836585 |
2022-05-12 |
birds
|
| 305 |
Rosablanca catfish (hap2 2023)[IGV] |
Trichomycterus rosablanca |
GCA_030015355.1_fTriRos1.hap2 |
SAMN32755940 |
PRJNA924297 |
2023-05-15 |
fish
|
| 306 |
royal ground snake (hap2 2023)[IGV] |
Erythrolamprus reginae |
GCA_031021085.1_rEryReg1.hap2 |
SAMN32631248 |
PRJNA921729 |
2023-08-30 |
reptiles
|
| 307 |
royal ground snake (hap3 2023)[IGV] |
Erythrolamprus reginae |
GCA_031001685.1_rEryReg1.hap3 |
SAMN32631248 |
PRJNA996865 |
2023-08-30 |
reptiles
|
| 308 |
rudd (Europe DD20220513a primary hap 2022)[IGV] |
Scardinius erythrophthalmus |
GCA_024453875.1_ASM2445387v1 |
SAMN28618522 |
PRJNA841808 |
2022-07-27 |
fish
|
| 309 |
rufous frog (hap1 2023)[IGV] |
Leptodactylus fuscus |
GCA_031893025.1_aLepFus1.hap1 |
SAMN37055805 |
PRJNA1007263 |
2023-09-26 |
amphibians
|
| 310 |
saddleback dolphin (alternate hap 2023)[IGV] |
Delphinus delphis |
GCA_949987525.1_mDelDel1.1_alternate_haplotype |
SAMEA111380534 |
PRJEB61572 |
2023-04-29 |
mammals
|
| 311 |
Saker falcon (bFalChe1 alternate hap 2022)[IGV] |
Falco cherrug |
GCA_023634115.1_bFalChe1.alt |
SAMN28688204 |
PRJNA842830 |
2022-06-01 |
birds
|
| 312 |
saltmarsh sparrow (bAmmCau1 alternate hap 2023)[IGV] |
Ammospiza caudacuta |
GCA_027887135.1_bAmmCau1.alt |
SAMN28421630 |
PRJNA839451 |
2023-01-17 |
birds
|
| 313 |
San Diegan legless lizard (HBS135921 alternate hap 2023)[IGV] |
Anniella stebbinsi |
GCA_029215795.1_rAnnSte1.0.hap2 |
SAMN33386066 |
PRJNA938518 |
2023-03-14 |
reptiles
|
| 314 |
sand lizard (alternate hap 2019)[IGV] |
Lacerta agilis |
GCA_009819545.1_rLacAgi1.alt |
SAMN12629509 |
PRJNA562019 |
2019-12-23 |
reptiles
|
| 315 |
Sardinian treefrog (hap2 2023)[IGV] |
Hyla sarda |
GCA_029493135.1_aHylSar1.hap2 |
SAMN32629340 |
PRJNA921708 |
2023-03-30 |
amphibians
|
| 316 |
Schreibers' long-fingered bat (hap2 2024)[IGV] |
Miniopterus schreibersii |
GCA_964145185.1_mMinSch1.hap2.1 |
SAMEA113980738 |
PRJEB76207 |
2024-06-04 |
mammals
|
| 317 |
sea lamprey (alternate hap 2020)[IGV] |
Petromyzon marinus |
GCA_010993595.1_kPetMar1.alt |
SAMN12629506 |
PRJNA562012 |
2020-02-24 |
otherChordates
|
| 318 |
shanny (alternate hap 2023)[IGV] |
Lipophrys pholis |
GCA_963383635.1_fLipPho2.1_alternate_haplotype |
SAMEA7522844 |
PRJEB65341 |
2023-08-26 |
fish
|
| 319 |
sharpnose sevengill shark (hap2 2024)[IGV] |
Heptranchias perlo |
GCA_035084135.1_sHepPer1.hap2 |
SAMN38891902 |
PRJNA1054129 |
2024-01-04 |
sharks
|
| 320 |
siamang (Jambi alternate hap 2024)[IGV] |
Symphalangus syndactylus |
GCA_028878085.3_NHGRI_mSymSyn1-v2.0_alt |
SAMN30216103 |
PRJNA916728 |
2024-01-05 |
primates
|
| 321 |
siamang (v2 Jambi alternate hap 2024)[IGV] |
Symphalangus syndactylus |
GCA_028878085.2_NHGRI_mSymSyn1-v2.0_alt |
SAMN30216103 |
PRJNA916728 |
2024-01-05 |
primates
|
| 322 |
Siamese fighting fish (v5.4 alternate hap 2023)[IGV] |
Betta splendens |
GCA_900651605.2_fBetSpl5.4_alternate_haplotype |
SAMEA104381735 |
PRJEB30366 |
2023-04-08 |
fish
|
| 323 |
Skyros wall lizard (rPodGai1.hap2.1 2024)[IGV] |
Podarcis gaigeae |
GCA_964106785.1_rPodGai1.hap2.1 |
SAMEA114217796 |
PRJEB76109 |
2024-06-06 |
reptiles
|
| 324 |
slow loris (alternate hap 2022)[IGV] |
Nycticebus coucang |
GCA_027406535.1_mNycCou1.alt |
SAMN28408555 |
PRJNA838347 |
2022-12-27 |
primates
|
| 325 |
smaller spotted catshark (alternate hap 2021)[IGV] |
Scyliorhinus canicula |
GCA_902713625.2_sScyCan1.2_alternate_haplotype |
SAMEA994730 |
PRJEB35944 |
2021-01-28 |
sharks
|
| 326 |
smalleye Pacific opah (hap1 2023)[IGV] |
Lampris incognitus |
GCA_029633845.1_fLamInc1.hap1 |
SAMN34060140 |
PRJNA951789 |
2023-04-07 |
fish
|
| 327 |
smalltooth sawfish (alternate hap 2019)[IGV] |
Pristis pectinata |
GCA_009764485.1_sPriPec2.alt |
SAMN12629505 |
PRJNA562010 |
2019-12-18 |
sharks
|
| 328 |
snake N.helvetica (rNatHel1.hap2.1 2024)[IGV] |
Natrix helvetica |
GCA_964273795.1_rNatHel1.hap2.1 |
SAMEA114598156 |
PRJEB80795 |
2024-10-04 |
reptiles
|
| 329 |
soprano pipistrelle (alternate hap 2023)[IGV] |
Pipistrellus pygmaeus |
GCA_949987765.1_mPipPyg2.1_alternate_haplotype |
SAMEA9921456 |
PRJEB61582 |
2023-04-29 |
mammals
|
| 330 |
South Island takahe (alternate hap 2021)[IGV] |
Porphyrio hochstetteri |
GCA_020801775.1_bPorHoc1.pat.decon |
SAMN22550412 |
PRJNA774332 |
2021-11-08 |
birds
|
| 331 |
southern bluefin tuna (alternate hap 2021)[IGV] |
Thunnus maccoyii |
GCA_910596085.1_fThuMac1.1_alternate_haplotype |
SAMEA8654747 |
PRJEB46020 |
2021-07-07 |
fish
|
| 332 |
southern tamandua (mTamTet1 alternate hap 2022)[IGV] |
Tamandua tetradactyla |
GCA_023853755.1_mTamTet1.alt |
SAMN12612337 |
PRJNA561940 |
2022-06-22 |
mammals
|
| 333 |
southern two-toed sloth (mChoDid1 alternate hap 2020)[IGV] |
Choloepus didactylus |
GCA_015220265.1_mChoDid1.alt |
SAMN12612024 |
PRJNA561938 |
2020-11-02 |
mammals
|
| 334 |
Sowerby's beaked whale (hap2 2024)[IGV] |
Mesoplodon bidens |
GCA_964148845.1_mMesBid2.hap2.1 |
SAMEA112165298 |
PRJEB76217 |
2024-06-06 |
mammals
|
| 335 |
speckled mousebird (bColStr4 hap2 2023)[IGV] |
Colius striatus |
GCA_028858625.2_bColStr4.1.hap2 |
SAMN33339572 |
PRJNA936150 |
2023-02-24 |
birds
|
| 336 |
speckled mousebird (hap2 2023)[IGV] |
Colius striatus |
GCA_028858625.1_bColStr4.hap2 |
SAMN33339572 |
PRJNA936150 |
2023-02-24 |
birds
|
| 337 |
spotted gar (fLepOcu1hap1 2024)[IGV] |
Lepisosteus oculatus |
GCA_040954845.1_fLepOcu1.hap1 |
SAMN41155427 |
PRJNA1106998 |
2024-08-01 |
fish
|
| 338 |
spotted ratfish (hap1 2024)[IGV] |
Hydrolagus colliei |
GCA_035084065.1_sHydCol1.hap1 |
SAMN39156054 |
PRJNA1058004 |
2024-01-05 |
sharks
|
| 339 |
starry smooth-hound (sMusAst1.hap2.1 2024)[IGV] |
Mustelus asterias |
GCA_964214025.1_sMusAst1.hap2.1 |
SAMEA114298637 |
PRJEB78882 |
2024-08-10 |
sharks
|
| 340 |
sterlet (paternal hap 2022)[IGV] |
Acipenser ruthenus |
GCA_902713435.2_fAciRut3.2_paternal_haplotype |
SAMEA5572864 |
PRJEB35913 |
2022-02-01 |
fish
|
| 341 |
stone loach (alternate hap 2022)[IGV] |
Barbatula barbatula |
GCA_947034905.1_fBarBar1.1_alternate_haplotype |
SAMEA11296540 |
PRJEB56421 |
2022-10-08 |
fish
|
| 342 |
striped catfish (fPanHyp1 alternate hap 2022)[IGV] |
Pangasianodon hypophthalmus |
GCA_027382375.1_fPanHyp1.alt |
SAMN32348883 |
PRJNA914798 |
2022-12-27 |
fish
|
| 343 |
striped dolphin (alternate hap 2023)[IGV] |
Stenella coeruleoalba |
GCA_951394445.1_mSteCoe1.1_alternate_haplotype |
SAMEA111380539 |
PRJEB62075 |
2023-05-13 |
mammals
|
| 344 |
Sumatran orangutan (v2 AG06213 alternate hap 2024)[IGV] |
Pongo abelii |
GCA_028885685.2_NHGRI_mPonAbe1-v2.0_alt |
SAMN10521808 |
PRJNA916741 |
2024-01-05 |
primates
|
| 345 |
Suruca trogon (bTroSur1 alternate hap 2021)[IGV] |
Trogon surrucura |
GCA_020746095.1_bTroSur1.alt.cur |
SAMN22550082 |
PRJNA774296 |
2021-11-05 |
birds
|
| 346 |
Suwannee snapping turtle (hap1 2023)[IGV] |
Macrochelys suwanniensis |
GCA_033296515.1_rMacSuw1.hap1 |
SAMN37052244 |
PRJNA1006848 |
2023-11-06 |
reptiles
|
| 347 |
Swainson's thrush (bCatUst1 v2 alternate hap 2020)[IGV] |
Catharus ustulatus |
GCA_009819505.2_bCatUst1.alt.v2 |
SAMN12618602 |
PRJNA561934 |
2020-11-05 |
birds
|
| 348 |
swamp sparrow (bMelGeo1 alternate hap 2023)[IGV] |
Melospiza georgiana |
GCA_028019105.1_bMelGeo1.alt |
SAMN22787412 |
PRJNA915610 |
2023-01-26 |
birds
|
| 349 |
Swift parrot (hap2 2024)[IGV] |
Lathamus discolor |
GCA_037157625.1_bLatDis1.hap2 |
SAMN40289871 |
PRJNA1085018 |
2024-03-15 |
birds
|
| 350 |
tailed frog (A.truei hap2 2024)[IGV] |
Ascaphus truei |
GCA_040206675.1_aAscTru1.hap2 |
SAMN41155128 |
PRJNA1106993 |
2024-06-17 |
amphibians
|
| 351 |
tammar wallaby (mMacEug1 alternate hap 2023)[IGV] |
Notamacropus eugenii |
GCA_028389975.1_mMacEug1.alt |
SAMN28408687 |
PRJNA838351 |
2023-02-01 |
mammals
|
| 352 |
tawny frogmouth (bPodStr1 alternate hap 2023)[IGV] |
Podargus strigoides |
GCA_028020675.1_bPodStr1.alt |
SAMN31801959 |
PRJNA912328 |
2023-01-26 |
birds
|
| 353 |
tawny owl (hap2 2023)[IGV] |
Strix aluco |
GCA_031877785.1_bStrAlu1.hap2 |
SAMN37055808 |
PRJNA1007266 |
2023-09-25 |
birds
|
| 354 |
thorny skate (alternate hap CabotCenter1 2020)[IGV] |
Amblyraja radiata |
GCA_010909745.1_sAmbRad1.alt |
SAMN09948523 |
PRJNA591368 |
2020-02-14 |
sharks
|
| 355 |
three-spined stickleback (hap2 2024)[IGV] |
Gasterosteus aculeatus |
GCA_964276385.1_fGasAcu3.hap2.1 |
SAMEA11296546 |
PRJEB81175 |
2024-10-25 |
fish
|
| 356 |
zebra shark (hap2 2023)[IGV] |
Stegostoma tigrinum |
GCA_030684295.1_sSteTig4.hap2 |
SAMN35823397 |
PRJNA986594 |
2023-08-07 |
sharks
|
| 357 |
tiny Cayenne caecilian (alternate hap 2019)[IGV] |
Microcaecilia unicolor |
GCA_901765105.1_aMicUni1.1_alternate_haplotype |
SAMEA104387962 |
PRJEB32738 |
2019-07-08 |
amphibians
|
| 358 |
torafugu (alternate hap 2019)[IGV] |
Takifugu rubripes |
GCA_901000745.3_fTakRub1.2_alternate_haplotype |
SAMEA104384834 |
PRJEB31989 |
2019-06-05 |
fish
|
| 359 |
tourmaline sunangel (hap2 2024)[IGV] |
Heliangelus exortis |
GCA_036172335.1_bHelExo1.hap2 |
SAMN37253778 |
PRJNA1012325 |
2024-01-26 |
birds
|
| 360 |
trahira (v1 hap1 2023)[IGV] |
Hoplias malabaricus |
GCA_029633855.1_fHopMal1.hap1 |
SAMN32740525 |
PRJNA923842 |
2023-04-07 |
fish
|
| 361 |
tufted duck (alternate hap 2019)[IGV] |
Aythya fuligula |
GCA_009819845.1_bAytFul2.alt |
SAMN12621346 |
PRJNA561953 |
2019-12-23 |
birds
|
| 362 |
Tungara frog (aEngPut4 2024)[IGV] |
Engystomops pustulosus |
GCA_040894015.1_aEngPut4.paternal |
SAMN42463661 |
PRJNA1135146 |
2024-07-30 |
amphibians
|
| 363 |
tunicate S.clava (kaStyClav1.hap2.1 2024)[IGV] |
Styela clava |
GCA_964204955.1_kaStyClav1.hap2.1 |
SAMEA7536473 |
PRJEB78413 |
2024-07-27 |
otherChordates
|
| 364 |
two-lined caecilian (alternate hap 2019)[IGV] |
Rhinatrema bivittatum |
GCA_901001175.1_aRhiBiv1.1_alternate_haplotype |
SAMEA104387956 |
PRJEB32112 |
2019-06-02 |
amphibians
|
| 365 |
vaquita (alternate hap mPhoSin1 2019)[IGV] |
Phocoena sinus |
GCA_008692045.1_mPhoSin1.alt |
SAMN12325353 |
PRJNA557832 |
2019-09-24 |
mammals
|
| 366 |
warty frogfish (fAntMac1 alternate hap 2020)[IGV] |
Antennarius maculatus |
GCA_013347815.1_fAntMac1.alt |
SAMN12623626 |
PRJNA561980 |
2020-06-12 |
fish
|
| 367 |
western capercaillie (alternate hap 2023)[IGV] |
Tetrao urogallus |
GCA_951394355.1_bTetUro1.1_alternate_haplotype |
SAMEA9654429 |
PRJEB62069 |
2023-05-13 |
birds
|
| 368 |
western European hedgehog (alternate hap 2023)[IGV] |
Erinaceus europaeus |
GCA_950295305.1_mEriEur2.1_alternate_haplotype |
SAMEA13207416 |
PRJEB61757 |
2023-05-01 |
mammals
|
| 369 |
western lowland gorilla (paternal KB3781 2024)[IGV] |
Gorilla gorilla gorilla |
GCA_028885475.2_NHGRI_mGorGor1-v2.0_pat |
SAMN04003007 |
PRJNA916733 |
2024-01-08 |
primates
|
| 370 |
western terrestrial garter snake (alternate hap 2019)[IGV] |
Thamnophis elegans |
GCA_009769695.1_rThaEle1.alt |
SAMN12629499 |
PRJNA561997 |
2019-12-19 |
reptiles
|
| 371 |
whiskered bat (hap2 2024)[IGV] |
Myotis mystacinus |
GCA_964195625.1_mMyoMys1.hap2.1 |
SAMEA114250307 |
PRJEB76003 |
2024-06-30 |
mammals
|
| 372 |
whiskered treeswift (bHemCom1 alternate hap 2021)[IGV] |
Hemiprocne comata |
GCA_020745695.1_bHemCom1.alt.cur |
SAMN22588383 |
PRJNA774830 |
2021-11-05 |
birds
|
| 373 |
white-beaked dolphin (alternate hap 2023)[IGV] |
Lagenorhynchus albirostris |
GCA_949774935.1_mLagAlb1.1_alternate_haplotype |
SAMEA111380537 |
PRJEB60993 |
2023-04-09 |
mammals
|
| 374 |
white-crowned manakin (hap2 2024)[IGV] |
Pseudopipra pipra |
GCA_036250135.1_bDixPip1.hap2 |
SAMN32739894 |
PRJNA1057370 |
2024-01-31 |
birds
|
| 375 |
white-tailed eagle (bHalAlb1.1 alternate hap 2022)[IGV] |
Haliaeetus albicilla |
GCA_947461935.1_bHalAlb1.1_alternate_haplotype |
SAMEA12857288 |
PRJEB57864 |
2022-12-02 |
birds
|
| 376 |
white-toothed pygmy shrew (mSunEtr1 alternate hap 2022)[IGV] |
Suncus etruscus |
GCA_024140225.1_mSunEtr1.alt.cur |
SAMN28420931 |
PRJNA839355 |
2022-07-05 |
mammals
|
| 377 |
white-tufted-ear marmoset (maternal 2020)[IGV] |
Callithrix jacchus |
GCA_011078405.1_mCalJac1.mat |
SAMN12368443 |
PRJNA558086 |
2020-03-10 |
primates
|
| 378 |
whooping crane (paternal hap 2023)[IGV] |
Grus americana |
GCA_028858595.1_bGruAme1.pat |
SAMN32775697 |
PRJNA924954 |
2023-02-24 |
birds
|
| 379 |
yellow-bellied toad (paternal hap 2024)[IGV] |
Bombina variegata |
GCA_964205305.1_aBomVar4.paternal.1 |
SAMEA112651403 |
PRJEB76885 |
2024-07-29 |
amphibians
|
| 380 |
yellow-crowned parrot (bAmaOch1hap2 2024)[IGV] |
Amazona ochrocephala |
GCA_039720425.1_bAmaOch1.hap2 |
SAMN41018448 |
PRJNA1102368 |
2024-05-24 |
birds
|
| 381 |
yellow-legged gull (bLarMic1.1_alternate_haplotype 2024)[IGV] |
Larus michahellis |
GCA_964199725.1_bLarMic1.1_alternate_haplotype |
SAMEA114211328 |
PRJEB77561 |
2024-07-13 |
birds
|
| 382 |
yellow-spotted hyrax (mHetBru1 alternate hap 2023)[IGV] |
Heterohyrax brucei |
GCA_028571665.1_mHetBru1.alt |
SAMN33092455 |
PRJNA931598 |
2023-02-08 |
mammals
|
| 383 |
yellow-throated sandgrouse (alternate hap 2019)[IGV] |
Pterocles gutturalis |
GCA_009769505.1_bPteGut1.alt |
SAMN12623217 |
PRJNA561959 |
2019-12-19 |
birds
|
| 384 |
yellowfin seabream (v.2019 alternate hap 2020)[IGV] |
Acanthopagrus latus |
GCA_904848175.1_fAcaLat1.1_alternate_haplotype |
SAMN16236878 |
PRJEB40701 |
2020-10-12 |
fish
|
| 385 |
yellowfin tuna (alternate hap 2021)[IGV] |
Thunnus albacares |
GCA_914744365.1_fThuAlb1.1_alternate_haplotype |
SAMEA8654749 |
PRJEB47266 |
2021-09-15 |
fish
|
| 386 |
zebra finch (alternate hap Blue55 v1 2020)[IGV] |
Taeniopygia guttata |
GCA_009859025.1_bTaeGut2.p.v1.alt |
SAMN09946140 |
PRJNA489187 |
2020-01-13 |
birds
|
| 387 |
zebra finch (Black17 v1.4 alternate hap 2021)[IGV] |
Taeniopygia guttata |
GCA_003957525.2_bTaeGut1.4.alt |
SAMN02981239 |
PRJNA489099 |
2021-04-28 |
birds
|
| 388 |
zebra finch (v3 Blue55 maternal 2020)[IGV] |
Taeniopygia guttata |
GCA_008822115.3_bTaeGut2.mat.v3 |
SAMN09946140 |
PRJNA489100 |
2020-02-21 |
birds
|
| 389 |
zebra finch (Blue55 paternal W 2020)[IGV] |
Taeniopygia guttata |
GCF_008822105.2_bTaeGut2.pat.W.v2 |
SAMN09946140 |
PRJNA555095 |
2020-02-12 |
birds
|
| 390 |
zebrafish (fDanRer4 alternate hap 2022)[IGV] |
Danio rerio |
GCA_944039255.1_fDanRer4.1_alternate_haplotype |
SAMEA14088276 |
PRJEB53408 |
2022-06-17 |
fish
|
| 391 |
zebrafish (WGS:CAHPTA01 2020)[IGV] |
Danio rerio |
GCA_903684865.1_fDreABH1.1 |
SAMEA4760846 |
PRJEB38589 |
2020-06-28 |
fish
|
| 392 |
zebrafish (WGS:CAHPTB02 2020)[IGV] |
Danio rerio |
GCA_903684855.2_fDreTuH1.2 |
SAMEA4760849 |
PRJEB38588 |
2020-07-31 |
fish
|
| 393 |
zig-zag eel (alternate hap)[IGV] |
Mastacembelus armatus |
GCA_900700395.1_fMasArm1.2_alternate_haplotype |
SAMEA104026378 |
PRJEB31553 |
2019-04-01 |
fish
|
