| 1 |
Abyssinian ground-hornbill[IGV] |
Bucorvus abyssinicus |
GCA_009769595.1_bBucAby1.alt |
SAMN12614799 |
PRJNA561886 |
2019-12-19 |
birds
|
| 2 |
Aeolian wall lizard (La Canna islet rPodRaf1 alternate hap 2022)[IGV] |
Podarcis raffonei |
GCA_027172095.1_rPodRaf1.alt |
SAMN28455423 |
PRJNA839508 |
2022-12-21 |
reptiles
|
| 3 |
African savanna elephant (hap1 mLoxAfr1 2023)[IGV] |
Loxodonta africana |
GCA_030020305.1_mLoxAfr1.hap1 |
SAMN32756554 |
PRJNA924321 |
2023-05-15 |
mammals
|
| 4 |
American flamingo[IGV] |
Phoenicopterus ruber ruber |
GCA_009819805.1_bPhoRub2.alt |
SAMN12614931 |
PRJNA561889 |
2019-12-23 |
birds
|
| 5 |
American shad (fAloSap1 alternate hap 2021)[IGV] |
Alosa sapidissima |
GCA_018492705.1_fAloSap1.alt |
SAMN18857608 |
PRJNA728146 |
2021-05-24 |
fish
|
| 6 |
American pika (hap2 mOchPri1 2023)[IGV] |
Ochotona princeps |
GCA_030435715.1_mOchPri1.hap2 |
SAMN35822658 |
PRJNA986274 |
2023-07-13 |
mammals
|
| 7 |
American alligator (2023 genbank)[IGV] |
Alligator mississippiensis |
GCA_030867065.1_rAllMis1 |
SAMN37045233 |
PRJNA1006700 |
2023-08-22 |
reptiles
|
| 8 |
Anna's hummingbird[IGV] |
Calypte anna |
GCA_003957575.1_bCalAnn1_v1.h |
SAMN02265252 |
PRJNA489140 |
2018-12-20 |
birds
|
| 9 |
Antarctic lanternfish (alternate hap 2023)[IGV] |
Electrona antarctica |
GCA_951214905.1_fEleAnt2.1_alternate_haplotype |
SAMEA8748807 |
PRJEB61833 |
2023-05-08 |
fish
|
| 10 |
Aristotle's catfish (alternate hap 2022)[IGV] |
Silurus aristotelis |
GCA_946807865.1_fSilAri3.1_alternate_haplotype |
SAMEA12595289 |
PRJEB55687 |
2022-09-16 |
fish
|
| 11 |
Asian bonytongue[IGV] |
Scleropages formosus |
GCA_900964985.2_fSclFor1.1_alternate_haplotype |
SAMEA4872123 |
PRJEB31996 |
2019-04-11 |
fish
|
| 12 |
Asiatic elephant (mEleMax1 alternate hap 2022)[IGV] |
Elephas maximus indicus |
GCA_024166345.1_mEleMax1_alternate_haplotype |
SAMN29174328 |
PRJNA850270 |
2022-07-05 |
mammals
|
| 13 |
Asiatic tapir (hap1 2023)[IGV] |
Tapirus indicus |
GCA_031878655.1_mTapInd1.hap1 |
SAMN37096863 |
PRJNA1010471 |
2023-09-25 |
mammals
|
| 14 |
Atlantic halibut[IGV] |
Hippoglossus hippoglossus |
GCA_009819745.1_fHipHip1.alt |
SAMN12629501 |
PRJNA562002 |
2019-12-27 |
fish
|
| 15 |
Atlantic stingray (hap2 2023)[IGV] |
Hypanus sabinus |
GCA_030144785.1_sHypSab1.hap2 |
SAMN32745077 |
PRJNA924071 |
2023-06-05 |
sharks
|
| 16 |
Atlantic cod[IGV] |
Gadus morhua |
GCA_902167395.1_gadMor3.0_alternate_haplotype |
SAMEA5574046 |
PRJEB33454 |
2019-07-16 |
fish
|
| 17 |
Atlantic horse mackerel (alternate hap 2021)[IGV] |
Trachurus trachurus |
GCA_905171655.2_fTraTra1.2_alternate_haplotype |
SAMEA7524396 |
PRJEB42173 |
2021-11-26 |
fish
|
| 18 |
Australian echidna (mTacAcu1 alternate hap 2020)[IGV] |
Tachyglossus aculeatus |
GCA_015852515.1_mTacAcu1.alt |
SAMN12634963 |
PRJNA607238 |
2020-12-08 |
mammals
|
| 19 |
banded archerfish (fToxJac2 alternate hap 2021)[IGV] |
Toxotes jaculatrix |
GCA_017976295.1_fToxJac2.alt |
SAMN18445299 |
PRJNA717045 |
2021-04-15 |
fish
|
| 20 |
barbel (alternate hap 2022)[IGV] |
Barbus barbus |
GCA_936446605.1_fBarBab1.1_alternate_haplotype |
SAMEA13335783 |
PRJEB52076 |
2022-04-16 |
fish
|
| 21 |
Barn swallow (bHirRus1 v3 alternate hap 2021)[IGV] |
Hirundo rustica |
GCA_015227815.3_bHirRus1.alt.v3 |
SAMN14675488 |
PRJNA636191 |
2021-11-24 |
birds
|
| 22 |
black rhinoceros (alternate hap 2021)[IGV] |
Diceros bicornis minor |
GCA_020826835.1_mDicBic1.pat.decon |
SAMN22047685 |
PRJNA773943 |
2021-11-10 |
mammals
|
| 23 |
black-capped chickadee (hap2 2023)[IGV] |
Poecile atricapillus |
GCA_030490855.1_bPoeAtr1.hap2 |
SAMN35074507 |
PRJNA972430 |
2023-07-18 |
birds
|
| 24 |
black-legged kittiwake (bRisTri1.mat 2023)[IGV] |
Rissa tridactyla |
GCA_028501385.1_bRisTri1.mat.cur.20221130 |
SAMN32104255 |
PRJNA909854 |
2023-02-10 |
birds
|
| 25 |
blackbelly eelpout (fLycPai1 haplotype 1 2023)[IGV] |
Lycodopsis pacificus |
GCA_028021495.1_fLycPai1.hap1 |
SAMN32629383 |
PRJNA921713 |
2023-01-26 |
fish
|
| 26 |
blackcap[IGV] |
Sylvia atricapilla |
GCA_009819715.1_bSylAtr1.alt |
SAMN12369542 |
PRJNA558065 |
2019-12-23 |
birds
|
| 27 |
Blainville's beaked whale (mMesDen1 alternate hap 2022)[IGV] |
Mesoplodon densirostris |
GCA_025094165.1_mMesDen1_alternate_haplotype |
SAMN29828597 |
PRJNA873679 |
2022-09-08 |
mammals
|
| 28 |
Blue whale (JJ_BM4_2016_0621 v2 alternate hap 2020)[IGV] |
Balaenoptera musculus |
GCA_008658375.2_mBalMus1.alt.v2 |
SAMN12287136 |
PRJNA554523 |
2020-09-30 |
mammals
|
| 29 |
blue-and-yellow macaw (hap2 2023)[IGV] |
Ara ararauna |
GCA_028858555.1_bAraAra1.hap2 |
SAMN33059336 |
PRJNA931363 |
2023-02-24 |
birds
|
| 30 |
blunt-snouted clingfish[IGV] |
Gouania willdenowi |
GCA_900650505.1_fGouWil2.1_alternate_haplotype |
SAMEA104026382 |
PRJEB30360 |
2019-02-07 |
fish
|
| 31 |
Boeseman's rainbowfish (fMelBoe1 alternate hap 2021)[IGV] |
Melanotaenia boesemani |
GCA_017639755.1_fMelBoe1.alt |
SAMN12623618 |
PRJNA561966 |
2021-03-30 |
fish
|
| 32 |
bonti-bonti (fTelBon1 alternate hap 2022)[IGV] |
Telmatherina bonti |
GCA_933228925.1_fTelBon1.1_alternate_haplotype |
SAMEA8592627 |
PRJEB51591 |
2022-03-23 |
fish
|
| 33 |
Bornean orangutan (AG05252 alternate hap 2023)[IGV] |
Pongo pygmaeus |
GCA_028885525.1_NHGRI_mPonPyg2-v1.1-hic.freeze_alt |
SAMN10521809 |
PRJNA916740 |
2023-02-28 |
primates
|
| 34 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 primary hap 2022)[IGV] |
Thomomys bottae |
GCA_024803745.1_mThoBot1.0.p |
SAMN29044214 |
PRJNA851166 |
2022-09-01 |
mammals
|
| 35 |
Botta's pocket gopher (hap2 2023)[IGV] |
Thomomys bottae |
GCA_031878665.1_mThoBot2.hap2 |
SAMN37300244 |
PRJNA1013537 |
2023-09-25 |
mammals
|
| 36 |
Brauer's lanternfish (alternate hap 2023)[IGV] |
Gymnoscopelus braueri |
GCA_963281105.1_fGymBra2.1_alternate_haplotype |
SAMEA12815494 |
PRJEB65069 |
2023-08-20 |
fish
|
| 37 |
butterfish (fScaArg1 alternate hap 2021)[IGV] |
Scatophagus argus |
GCA_020382915.1_fScaArg1.alt |
SAMN12623616 |
PRJNA749580 |
2021-10-07 |
fish
|
| 38 |
California sea lion (mZalCal1 alternate hap 2020)[IGV] |
Zalophus californianus |
GCA_009762295.2_mZalCal1.alt.v2 |
SAMN12368149 |
PRJNA559674 |
2020-06-12 |
mammals
|
| 39 |
Canada lynx (LIC74 v2 alternate hap 2020)[IGV] |
Lynx canadensis |
GCA_007474575.2_mLynCan4.alt.v2 |
SAMN09948483 |
PRJNA489108 |
2020-06-12 |
mammals
|
| 40 |
carmine bee-eater[IGV] |
Merops nubicus |
GCA_009819585.1_bMerNub1.alt |
SAMN12621035 |
PRJNA561895 |
2019-12-23 |
birds
|
| 41 |
channel bull blenny[IGV] |
Cottoperca gobio |
GCA_900634435.1_fCotGob3.1_alternate_haplotype |
SAMEA104242975 |
PRJEB30256 |
2019-02-07 |
fish
|
| 42 |
chicken (Huxu 2023)[IGV] |
Gallus gallus |
GCA_024206055.2_ASM2420605v2 |
SAMN20717417 |
PRJNA693184 |
2023-02-09 |
birds
|
| 43 |
chicken (Cobb bGalGal5 alternate hap 2022)[IGV] |
Gallus gallus |
GCA_027408205.1_bGalGal5.alt |
SAMN28017485 |
PRJNA838371 |
2022-12-27 |
birds
|
| 44 |
chicken (Cobb bGalGal5 primary hap 2022)[IGV] |
Gallus gallus |
GCA_027408225.1_bGalGal5.pri |
SAMN28017485 |
PRJNA838370 |
2022-12-28 |
birds
|
| 45 |
chicken (Ross bGalGal4 alternate hap 2022)[IGV] |
Gallus gallus |
GCA_027408255.1_bGalGal4.alt |
SAMN28017486 |
PRJNA838368 |
2022-12-27 |
birds
|
| 46 |
chicken (Ross bGalGal4 primary hap 2023)[IGV] |
Gallus gallus |
GCA_027557775.1_bGalGal4.pri |
SAMN28017486 |
PRJNA838369 |
2023-01-03 |
birds
|
| 47 |
chicken (matHap)[IGV] |
Gallus gallus |
GCF_016699485.2_bGalGal1.mat.broiler.GRCg7b |
SAMN15960293 |
PRJNA660757 |
2021-01-19 |
birds
|
| 48 |
chicken (patHap)[IGV] |
Gallus gallus |
GCF_016700215.1_bGalGal1.pat.whiteleghornlayer.GRCg7w |
SAMN15960293 |
PRJNA660758 |
2021-01-19 |
birds
|
| 49 |
chimpanzee (AG18354 alternate hap 2023)[IGV] |
Pan troglodytes |
GCA_028858805.1_NHGRI_mPanTro3-v1.1-hic.freeze_alt |
SAMN30216104 |
PRJNA916737 |
2023-02-27 |
primates
|
| 50 |
Chinese pangolin (hap2 mManPen7 2023)[IGV] |
Manis pentadactyla |
GCA_030020945.1_mManPen7.hap2 |
SAMN32757332 |
PRJNA924340 |
2023-05-16 |
mammals
|
| 51 |
chub mackerel (fScoJap1 alternate hap 2022)[IGV] |
Scomber japonicus |
GCA_027409835.1_fScoJap1.alt |
SAMN32224830 |
PRJNA912109 |
2022-12-27 |
fish
|
| 52 |
climbing perch[IGV] |
Anabas testudineus |
GCA_900650485.1_fAnaTes1.2_alternate_haplotype |
SAMEA104026376 |
PRJEB30391 |
2019-02-07 |
fish
|
| 53 |
clouded leopard (mNeoNeb1 alternate hap 2023)[IGV] |
Neofelis nebulosa |
GCA_028018655.1_mNeoNeb1.alt |
SAMN31801981 |
PRJNA915743 |
2023-01-26 |
mammals
|
| 54 |
common yellowthroat[IGV] |
Geothlypis trichas |
GCA_009764545.1_bGeoTri1.alt |
SAMN12631222 |
PRJNA589704 |
2019-12-18 |
birds
|
| 55 |
common tern[IGV] |
Sterna hirundo |
GCA_009819645.1_bSteHir1.alt |
SAMN12369541 |
PRJNA558063 |
2019-12-23 |
birds
|
| 56 |
common brushtail (alternate hap 2020)[IGV] |
Trichosurus vulpecula |
GCA_011100645.1_mTriVul1.alt |
SAMN12629507 |
PRJNA562013 |
2020-03-09 |
mammals
|
| 57 |
common cuckoo (bCucCan1 alternate hap 2021)[IGV] |
Cuculus canorus |
GCA_017976305.1_bCucCan1.alt |
SAMN12629508 |
PRJNA562016 |
2021-04-15 |
birds
|
| 58 |
common swift (bApuApu2 alternate hap 2021)[IGV] |
Apus apus |
GCA_020740585.1_bApuApu2.alt.cur |
SAMN22785356 |
PRJNA776337 |
2021-11-03 |
birds
|
| 59 |
common myna (bArcTri1 alternate hap 2023)[IGV] |
Acridotheres tristis |
GCA_027559525.1_bAcrTri1.alt |
SAMN28454388 |
PRJNA839506 |
2023-01-03 |
birds
|
| 60 |
common pipistrelle (alternate hap 2020)[IGV] |
Pipistrellus pipistrellus |
GCA_903992515.1_mPipPip1.1_alternate_haplotype |
SAMEA994724 |
PRJEB39565 |
2020-08-04 |
mammals
|
| 61 |
common toad (alternate hap 2021)[IGV] |
Bufo bufo |
GCA_905171715.1_aBufBuf1.1_alternate_haplotype |
SAMEA7521636 |
PRJEB42169 |
2021-01-28 |
amphibians
|
| 62 |
common frog (alternate hap 2021)[IGV] |
Rana temporaria |
GCA_905171725.1_aRanTem1.1_alternate_haplotype |
SAMEA7521635 |
PRJEB42170 |
2021-01-28 |
amphibians
|
| 63 |
common sole (alternate hap 2023)[IGV] |
Solea solea |
GCA_958295035.1_fSolSol10.1_alternate_haplotype |
SAMEA10984647 |
PRJEB63670 |
2023-07-06 |
fish
|
| 64 |
convict blenny (fPhoLeu1 alternate hap 2021)[IGV] |
Pholidichthys leucotaenia |
GCA_020510965.1_fPhoLeu1.alt |
SAMN12623617 |
PRJNA749576 |
2021-10-15 |
fish
|
| 65 |
copperband butterflyfish (fCheRos1 alternate hap 2021)[IGV] |
Chelmon rostratus |
GCA_017976315.1_fCheRos1.alt |
SAMN12623620 |
PRJNA561970 |
2021-04-15 |
fish
|
| 66 |
Cretan wall lizard (alternate hap 2023)[IGV] |
Podarcis cretensis |
GCA_951804955.1_rPodCre2.1_alternate_haplotype |
SAMEA12110019 |
PRJEB62766 |
2023-06-02 |
reptiles
|
| 67 |
crucian carp (alternate hap 2023)[IGV] |
Carassius carassius |
GCA_963082795.1_fCarCar2.1_alternate_haplotype |
SAMEA11296534 |
PRJEB64836 |
2023-08-08 |
fish
|
| 68 |
cunner (fTauAds1 alternate hap 2021)[IGV] |
Tautogolabrus adspersus |
GCA_020745675.1_fTauAds1.alt.cur |
SAMN22589422 |
PRJNA774879 |
2021-11-05 |
fish
|
| 69 |
Dalmatian pelican (alternate hap 2023)[IGV] |
Pelecanus crispus |
GCA_030449815.1_bPelCri1.alt |
SAMN35784560 |
PRJNA984932 |
2023-07-13 |
birds
|
| 70 |
Daubenton's bat (alternate hap 2023)[IGV] |
Myotis daubentonii |
GCA_963242275.1_mMyoDau2.1_alternate_haplotype |
SAMEA9921455 |
PRJEB65247 |
2023-08-20 |
mammals
|
| 71 |
denticle herring[IGV] |
Denticeps clupeoides |
GCA_900700345.2_fDenClu1.1_alternate_haplotype |
SAMEA104129917 |
PRJEB31546 |
2019-03-27 |
fish
|
| 72 |
diamondback terrapin (hap2 rMalTer1 2023)[IGV] |
Malaclemys terrapin pileata |
GCA_027887205.1_rMalTer1.hap2 |
SAMN31394215 |
PRJNA895897 |
2023-01-18 |
reptiles
|
| 73 |
dorado (hap1 2023)[IGV] |
Salminus brasiliensis |
GCA_030448965.1_fSalBra1.hap1 |
SAMN35075251 |
PRJNA972454 |
2023-07-13 |
fish
|
| 74 |
Downy woodpecker (bDryPub1 alternate hap 2020)[IGV] |
Dryobates pubescens |
GCA_014839825.1_bDryPub1.alt |
SAMN12629497 |
PRJNA561992 |
2020-09-30 |
birds
|
| 75 |
dugong (hap2 mDugDug1 2023)[IGV] |
Dugong dugon |
GCA_030020955.1_mDugDug1.hap2 |
SAMN33212336 |
PRJNA932821 |
2023-05-16 |
mammals
|
| 76 |
East African grey crowned-crane[IGV] |
Balearica regulorum gibbericeps |
GCA_011004865.1_bBalReg1.alt |
SAMN12615749 |
PRJNA561891 |
2020-02-24 |
birds
|
| 77 |
eastern narrow-mouthed toad (hap2 2023)[IGV] |
Gastrophryne carolinensis |
GCA_027917415.1_aGasCar1.hap2 |
SAMN31805274 |
PRJNA916749 |
2023-01-18 |
amphibians
|
| 78 |
electric eel (fEleEle1 alternate hap 2020)[IGV] |
Electrophorus electricus |
GCA_013347915.1_fEleEle1.alt |
SAMN12623625 |
PRJNA561982 |
2020-06-12 |
fish
|
| 79 |
epaulette shark (alternate hap sHemOce1 2021)[IGV] |
Hemiscyllium ocellatum |
GCA_020745765.1_sHemOce1.mat.decon |
SAMN22550098 |
PRJNA774309 |
2021-11-05 |
sharks
|
| 80 |
ermine (alternate hap 2020)[IGV] |
Mustela erminea |
GCA_009829165.1_mMusErm1.alt |
SAMN12611999 |
PRJNA561930 |
2020-01-03 |
mammals
|
| 81 |
Eurasian river otter (alternate hap 2019)[IGV] |
Lutra lutra |
GCA_902653095.1_mLutLut1.1_alternate_haplotype |
SAMEA994731 |
PRJEB35338 |
2019-12-09 |
mammals
|
| 82 |
Eurasian red squirrel (alternate hap 2019)[IGV] |
Sciurus vulgaris |
GCA_902685485.1_mSciVul1.1_alternate_haplotype |
SAMEA994733 |
PRJEB35379 |
2019-11-26 |
mammals
|
| 83 |
Eurasian water vole (alternate hap 2020)[IGV] |
Arvicola amphibius |
GCA_903992525.1_mArvAmp1.1_alternate_haplotype |
SAMEA994740 |
PRJEB39549 |
2020-08-04 |
mammals
|
| 84 |
Eurasian nightjar (alternate hap 2021)[IGV] |
Caprimulgus europaeus |
GCA_907165095.1_bCapEur3.1_alternate_haplotype |
SAMEA7524394 |
PRJEB44541 |
2021-05-15 |
birds
|
| 85 |
Eurasian badger (v3.2 2022)[IGV] |
Meles meles |
GCA_922984935.2_mMelMel3.2_paternal_haplotype |
SAMEA7524400 |
PRJEB49353 |
2022-03-23 |
mammals
|
| 86 |
Eurasian badger (2021)[IGV] |
Meles meles |
GCA_922990625.1_mMelMel3.1_maternal_haplotype_uncurated |
SAMEA7524400 |
PRJEB49352 |
2021-12-18 |
mammals
|
| 87 |
Eurasian minnow (alternate hap 2023)[IGV] |
Phoxinus phoxinus |
GCA_949152275.1_fPhoPho1.1_alternate_haplotype |
SAMEA11296539 |
PRJEB59821 |
2023-04-09 |
fish
|
| 88 |
European shrew (alternate hap 2023)[IGV] |
Sorex araneus |
GCA_027595995.1_mSorAra2.alt |
SAMN32477717 |
PRJNA916524 |
2023-01-06 |
mammals
|
| 89 |
European pond turtle (hap2 rEmyOrb1 2023)[IGV] |
Emys orbicularis |
GCA_028017845.1_rEmyOrb1.hap2 |
SAMN31805221 |
PRJNA919101 |
2023-01-26 |
reptiles
|
| 90 |
European leaf-toed gecko (hap2 2023)[IGV] |
Euleptes europaea |
GCA_029931755.1_rEulEur1.hap2 |
SAMN32622440 |
PRJNA919167 |
2023-05-03 |
reptiles
|
| 91 |
European mink (alternate hap 2023)[IGV] |
Mustela lutreola |
GCA_030435785.1_mMusLut2.alt |
SAMN35784236 |
PRJNA984927 |
2023-07-11 |
mammals
|
| 92 |
European turtle dove (v1.2 alternate hap 2021)[IGV] |
Streptopelia turtur |
GCA_901699165.2_bStrTur1.2_alternate_haplotype |
SAMEA994735 |
PRJEB32725 |
2021-04-15 |
birds
|
| 93 |
European starfish[IGV] |
Asterias rubens |
GCA_902459445.1_eAstRub1.2_alternate_haplotype |
SAMEA994741 |
PRJEB33973 |
2019-08-16 |
echinoderm
|
| 94 |
European robin (alternate hap 2021)[IGV] |
Erithacus rubecula |
GCA_903797565.2_bEriRub2.2_alternate_haplotype |
SAMEA4760689 |
PRJEB38657 |
2021-03-21 |
birds
|
| 95 |
European woodmouse (alternate hap 2022)[IGV] |
Apodemus sylvaticus |
GCA_947179525.1_mApoSyl1.1_alternate_haplotype |
SAMEA7702024 |
PRJEB56947 |
2022-11-01 |
mammals
|
| 96 |
European plaice (alternate hap 2022)[IGV] |
Pleuronectes platessa |
GCA_947347695.1_fPlePla1.1_alternate_haplotype |
SAMEA13853390 |
PRJEB57576 |
2022-11-27 |
fish
|
| 97 |
European flounder (alternate hap 2023)[IGV] |
Platichthys flesus |
GCA_949316195.1_fPlaFle2.1_alternate_haplotype |
SAMEA110026475 |
PRJEB60140 |
2023-04-08 |
fish
|
| 98 |
European chub (alternate hap 2023)[IGV] |
Squalius cephalus |
GCA_949319155.1_fSquCep2.1_alternate_haplotype |
SAMEA11296547 |
PRJEB60238 |
2023-04-09 |
fish
|
| 99 |
European shag (alternate hap 2023)[IGV] |
Phalacrocorax aristotelis |
GCA_949628205.1_bGulAri2.1_alternate_haplotype |
SAMEA10059652 |
PRJEB60538 |
2023-04-09 |
birds
|
| 100 |
European snow vole (alternate hap 2023)[IGV] |
Chionomys nivalis |
GCA_950005115.1_mChiNiv1.1_alternate_haplotype |
SAMEA13217622 |
PRJEB61597 |
2023-04-29 |
mammals
|
| 101 |
Eurpoean golden plover (bPluApr1 alternate hap 2021)[IGV] |
Pluvialis apricaria |
GCA_017639475.1_bPluApr1.alt |
SAMN18353970 |
PRJNA715923 |
2021-03-30 |
birds
|
| 102 |
fire-bellied toad (aBomBom1 alternate hap 2023)[IGV] |
Bombina bombina |
GCA_027579415.1_aBomBom1.alt |
SAMN32378350 |
PRJNA915413 |
2023-01-06 |
amphibians
|
| 103 |
flier cichlid[IGV] |
Archocentrus centrarchus |
GCA_007364235.1_fArcCen1_v1.h |
SAMN09948522 |
PRJNA489130 |
2019-07-24 |
fish
|
| 104 |
Florida worm lizard (hap1 rRhiFlo1 2023)[IGV] |
Rhineura floridana |
GCA_030035715.1_rRhiFlo1.hap1 |
SAMN34105704 |
PRJNA953089 |
2023-05-16 |
reptiles
|
| 105 |
freshwater garfish (fXenCan1 alternate hap 2020)[IGV] |
Xenentodon cancila |
GCA_014839645.1_fXenCan1.alt |
SAMN12623622 |
PRJNA561974 |
2020-09-30 |
fish
|
| 106 |
Gaboon caecilian[IGV] |
Geotrypetes seraphini |
GCA_902459495.1_aGeoSer1.1_alternate_haplotype |
SAMEA104387963 |
PRJEB33991 |
2019-08-18 |
amphibians
|
| 107 |
garden warbler (bSylBor1 alternate hap 2020)[IGV] |
Sylvia borin |
GCA_014839765.1_bSylBor1.alt |
SAMN12618613 |
PRJNA561946 |
2020-09-30 |
birds
|
| 108 |
Gharial (hap1 2023)[IGV] |
Gavialis gangeticus |
GCA_030020385.1_rGavGan2.hap1 |
SAMN34116453 |
PRJNA953441 |
2023-05-16 |
reptiles
|
| 109 |
giant manta (sMobBir1 2023)[IGV] |
Mobula birostris |
GCA_030035685.1_sMobBir1.hap2 |
SAMN32746370 |
PRJNA924118 |
2023-05-22 |
sharks
|
| 110 |
gilthead seabream[IGV] |
Sparus aurata |
GCA_900880695.1_fSpaAur1.1_alternate_haplotype |
SAMEA104384835 |
PRJEB31902 |
2019-07-11 |
fish
|
| 111 |
golden eagle (v1.4 alternate hap 2021)[IGV] |
Aquila chrysaetos chrysaetos |
GCA_902153765.2_bAquChr1.4_alternate_haplotype |
SAMEA994725 |
PRJEB33298 |
2021-03-26 |
birds
|
| 112 |
Goodes thornscrub tortoise[IGV] |
Gopherus evgoodei |
GCA_007399395.1_rGopEvg1_v1.alt |
SAMN03496275 |
PRJNA489104 |
2019-07-24 |
reptiles
|
| 113 |
Grand Cayman blue iguana (hap2 2023)[IGV] |
Cyclura pinguis |
GCA_030412085.1_rCycPin1.hap2 |
SAMN35151422 |
PRJNA973804 |
2023-07-05 |
reptiles
|
| 114 |
gray short-tailed opossum (mMonDom1 alternate hap 2023)[IGV] |
Monodelphis domestica |
GCA_027917375.1_mMonDom1.alt |
SAMN31801966 |
PRJNA915591 |
2023-01-17 |
mammals
|
| 115 |
gray squirrel (alternate hap 2019)[IGV] |
Sciurus carolinensis |
GCA_902685475.1_mSciCar1.1_alternate_haplotype |
SAMEA994726 |
PRJEB35385 |
2019-11-26 |
mammals
|
| 116 |
gray wolf (alternate hap 2021)[IGV] |
Canis lupus |
GCA_905319845.1_mCanLor1.1_alternate_haplotype |
SAMEA7532739 |
PRJEB43199 |
2021-03-21 |
mammals
|
| 117 |
great potoo (bNycGra1 alternate hap 2020)[IGV] |
Nyctibius grandis |
GCA_013368595.1_bNycGra1.alt |
SAMN12622411 |
PRJNA562021 |
2020-06-23 |
birds
|
| 118 |
great white shark (alternate hap 2021)[IGV] |
Carcharodon carcharias |
GCA_017639455.1_sCarCar2.alt |
SAMN12629504 |
PRJNA562008 |
2021-03-30 |
sharks
|
| 119 |
greater horseshoe bat (MPI-CBG alternate hap 2019)[IGV] |
Rhinolophus ferrumequinum |
GCA_004115295.1_mRhiFer1_v1.h |
SAMN09948510 |
PRJNA489105 |
2019-01-28 |
mammals
|
| 120 |
greater pipefish[IGV] |
Syngnathus acus |
GCA_901709685.1_fSynAcu1.1_alternate_haplotype |
SAMEA104381750 |
PRJEB32742 |
2019-06-02 |
fish
|
| 121 |
greater pipefish (v2 alternate haplotype 2023)[IGV] |
Syngnathus acus |
GCA_948146095.1_fSynAcu2.1_alternate_haplotype |
SAMEA13854528 |
PRJEB58843 |
2023-01-18 |
fish
|
| 122 |
greater pipefish (v2 2023 genbank)[IGV] |
Syngnathus acus |
GCA_948146105.1_fSynAcu2.1 |
SAMEA13854528 |
PRJEB58844 |
2023-01-18 |
fish
|
| 123 |
greater sand-eel (alternate hap 2023)[IGV] |
Hyperoplus immaculatus |
GCA_949358355.1_fHypImm3.1_alternate_haplotype |
SAMEA13854416 |
PRJEB60327 |
2023-04-09 |
fish
|
| 124 |
greater argentine (alternate hap 2023)[IGV] |
Argentina silus |
GCA_951799415.1_fArgSil1.1_alternate_haplotype |
SAMEA110137623 |
PRJEB62528 |
2023-05-27 |
fish
|
| 125 |
green sea turtle (v2 alternate hap 2021)[IGV] |
Chelonia mydas |
GCA_015220195.2_rCheMyd1.alt.v2 |
SAMN12612360 |
PRJNA561942 |
2021-07-15 |
reptiles
|
| 126 |
grey whale (mEscRob2 alternate hap 2023)[IGV] |
Eschrichtius robustus |
GCA_028021475.1_mEscRob2.alt |
SAMN32629250 |
PRJNA921703 |
2023-01-26 |
mammals
|
| 127 |
gudgeon (alternate hap 2023)[IGV] |
Gobio gobio |
GCA_949357705.1_fGobGob1.1_alternate_haplotype |
SAMEA11296538 |
PRJEB60323 |
2023-04-09 |
fish
|
| 128 |
gyrfalcon (bFalRus1 alternate hap 2020)[IGV] |
Falco rusticolus |
GCA_015220155.1_bFalRus1.alt |
SAMN12629496 |
PRJNA561989 |
2020-11-02 |
birds
|
| 129 |
Harpy eagle (bHarHar1 alternate hap 2022)[IGV] |
Harpia harpyja |
GCA_026419925.1_bHarHar1 |
SAMN31530492 |
PRJNA896140 |
2022-11-25 |
birds
|
| 130 |
Hawaiian crow (bCorHaw1 alternate hap 2021)[IGV] |
Corvus hawaiiensis |
GCA_020740675.1_bCorHaw1.alt.cur |
SAMN22550278 |
PRJNA774316 |
2021-11-03 |
birds
|
| 131 |
hazel dormouse (alternate hap 2023)[IGV] |
Muscardinus avellanarius |
GCA_963383665.1_mMusAve1.1_alternate_haplotype |
SAMEA110180654 |
PRJEB65339 |
2023-08-27 |
mammals
|
| 132 |
hippopotamus (mHipAmp2 hap1 2023)[IGV] |
Hippopotamus amphibius kiboko |
GCA_030028035.1_mHipAmp2.hap1 |
SAMN33342074 |
PRJNA936167 |
2023-05-17 |
mammals
|
| 133 |
hoatzin (hap2 2023)[IGV] |
Opisthocomus hoazin |
GCA_030867165.1_bOpiHoa1.hap2 |
SAMN37055462 |
PRJNA1007257 |
2023-08-24 |
birds
|
| 134 |
honeycomb rockfish (fSebUmb1 alternate hap 2020)[IGV] |
Sebastes umbrosus |
GCA_015220095.1_fSebUmb1.alt |
SAMN12629503 |
PRJNA562006 |
2020-11-02 |
fish
|
| 135 |
hourglass treefrog (maternal 2023)[IGV] |
Dendropsophus ebraccatus |
GCA_027789725.1_aDenEbr1.mat |
SAMN32145295 |
PRJNA910818 |
2023-01-13 |
amphibians
|
| 136 |
house finch (bHaeMex1 alternate hap 2022)[IGV] |
Haemorhous mexicanus |
GCA_027406555.1_bHaeMex1.alt |
SAMN28453576 |
PRJNA839498 |
2022-12-27 |
birds
|
| 137 |
house mouse (alternate hap 2023)[IGV] |
Mus musculus |
GCA_949316305.1_mMusMuc1.1_alternate_haplotype |
SAMEA112251260 |
PRJEB60145 |
2023-04-08 |
mammals
|
| 138 |
human (mHomSap3 WGS:JACSEX01 2021)[IGV] |
Homo sapiens |
GCA_016695395.2_mHomSap3.mat |
SAMN12568975 |
PRJNA562023 |
2021-01-19 |
primates
|
| 139 |
human (WGS:JACSEW01 2021 alternate hap)[IGV] |
Homo sapiens |
GCA_016700455.2_mHomSap3.pat |
SAMN12568975 |
PRJNA562022 |
2021-01-19 |
primates
|
| 140 |
Humboldt's penguin (bSphHub1 alternate hap 2022)[IGV] |
Spheniscus humboldti |
GCA_027474345.1_bSphHub1.alt |
SAMN28408465 |
PRJNA838344 |
2022-12-27 |
birds
|
| 141 |
hybrid cattle (Angus x Brahman F1 Angus haplotype 2018)[IGV] |
Bos indicus x Bos taurus |
GCA_003369685.2_UOA_Angus_1 |
SAMN08473802 |
PRJNA432857 |
2018-11-30 |
mammals
|
| 142 |
Indian glassy fish[IGV] |
Parambassis ranga |
GCA_900651595.1_fParRan2.1_alternate_haplotype |
SAMEA4675621 |
PRJEB30258 |
2019-02-12 |
fish
|
| 143 |
Indo-Pacific tarpon (alternate hap 2020)[IGV] |
Megalops cyprinoides |
GCA_013368575.1_fMegCyp1.alt |
SAMN12623619 |
PRJNA561968 |
2020-06-23 |
fish
|
| 144 |
jewelled blenny[IGV] |
Salarias fasciatus |
GCA_902148835.1_fSalaFa1.1_alternate_haplotype |
SAMEA4966329 |
PRJEB33183 |
2019-07-03 |
fish
|
| 145 |
John dory (alternate hap 2023)[IGV] |
Zeus faber |
GCA_960530785.1_fZeuFab8.1_alternate_haplotype |
SAMEA111562156 |
PRJEB64532 |
2023-07-26 |
fish
|
| 146 |
kagu (bRhyJub1 alternate hap 2023)[IGV] |
Rhynochetos jubatus |
GCA_027595965.1_bRhyJub1.alt |
SAMN31802033 |
PRJNA916496 |
2023-01-06 |
birds
|
| 147 |
kakapo (Jane alternate hap 2019)[IGV] |
Strigops habroptila |
GCA_004011185.1_bStrHab1_v1.h |
SAMN09948751 |
PRJNA489134 |
2019-01-10 |
birds
|
| 148 |
killer whale (alternate hap 2022)[IGV] |
Orcinus orca |
GCA_937001455.1_mOrcOrc1.1_alternate_haplotype |
SAMEA8800229 |
PRJEB52132 |
2022-05-01 |
mammals
|
| 149 |
Korean giant-fin mudskipper[IGV] |
Periophthalmus magnuspinnatus |
GCA_009829135.1_fPerMag1.alt |
SAMN12629500 |
PRJNA561999 |
2020-01-03 |
fish
|
| 150 |
lammergeier (bGypBar2 alternate hap 2023)[IGV] |
Gypaetus barbatus |
GCA_028017155.1_bGypBar2.alt |
SAMN32256411 |
PRJNA912842 |
2023-01-26 |
birds
|
| 151 |
lance-tailed manakin[IGV] |
Chiroxiphia lanceolata |
GCA_009829205.1_bChiLan1.alt |
SAMN12620979 |
PRJNA561944 |
2020-01-03 |
birds
|
| 152 |
lanner falcon (bFalBia1 alternate hap 2022)[IGV] |
Falco biarmicus |
GCA_023634305.1_bFalBia1.alt |
SAMN28688289 |
PRJNA842827 |
2022-06-01 |
birds
|
| 153 |
large-eye snaggletooth (alternate hap 2023)[IGV] |
Borostomias antarcticus |
GCA_949987545.1_fBorAnt1.1_alternate_haplotype |
SAMEA8748812 |
PRJEB61590 |
2023-04-29 |
fish
|
| 154 |
largescale foureyes (fAnaAna1 alternate hap 2020)[IGV] |
Anableps anableps |
GCA_014839705.1_fAnaAna1.alt |
SAMN12623628 |
PRJNA561986 |
2020-09-30 |
fish
|
| 155 |
Lataste's viper (alternate hap 2022)[IGV] |
Vipera latastei |
GCA_024294605.1_rVipLat1.alt |
SAMN28408464 |
PRJNA838199 |
2022-07-16 |
reptiles
|
| 156 |
leatherback sea turtle[IGV] |
Dermochelys coriacea |
GCA_009762595.1_rDerCor1.alt |
SAMN12629498 |
PRJNA561994 |
2019-12-18 |
reptiles
|
| 157 |
leatherback sea turtle (v2 alternate hap 2020)[IGV] |
Dermochelys coriacea |
GCA_009762595.2_rDerCor1.alt.v2 |
SAMN12629498 |
PRJNA561994 |
2020-12-08 |
reptiles
|
| 158 |
lesser kestrel (alternate hap 2021)[IGV] |
Falco naumanni |
GCA_017639645.1_bFalNau1.mat |
SAMN16870685 |
PRJNA702665 |
2021-03-30 |
birds
|
| 159 |
lesser Egyptian jerboa (alternate hap 2021)[IGV] |
Jaculus jaculus |
GCA_020740715.1_mJacJac1.pat.decon |
SAMN20391724 |
PRJNA773798 |
2021-11-03 |
mammals
|
| 160 |
lesser salmon catfish (fNeoGra1 alternate hap 2023)[IGV] |
Neoarius graeffei |
GCA_027579805.1_fNeoGra1.alt |
SAMN28453209 |
PRJNA839495 |
2023-01-06 |
fish
|
| 161 |
lesser rhea (bPtePen1 alternate hap 2023)[IGV] |
Rhea pennata |
GCA_028389885.1_bPtePen1.alt |
SAMN32606345 |
PRJNA918802 |
2023-02-01 |
birds
|
| 162 |
lesser sand-eel (alternate hap 2023)[IGV] |
Ammodytes marinus |
GCA_950004245.1_fAmmMar1.1_alternate_haplotype |
SAMEA110137622 |
PRJEB61583 |
2023-04-29 |
fish
|
| 163 |
limp eelpout (alternate hap 2023)[IGV] |
Melanostigma gelatinosum |
GCA_949748265.1_fMelGel1.1_alternate_haplotype |
SAMEA12815492 |
PRJEB60806 |
2023-04-08 |
fish
|
| 164 |
live sharksucker[IGV] |
Echeneis naucrates |
GCA_900963505.1_fEcheNa1.1_alternate_haplotype |
SAMEA4966390 |
PRJEB31993 |
2019-04-11 |
fish
|
| 165 |
long-tailed hermit (PSU5 alternate hap 2022)[IGV] |
Phaethornis superciliosus |
GCA_023637925.1_DD_ASM_B1a |
SAMN23532249 |
PRJNA785156 |
2022-06-01 |
birds
|
| 166 |
longspined bullhead (fTauBub2.1 alternate hap 2021)[IGV] |
Taurulus bubalis |
GCA_910589325.1_fTauBub2.1_alternate_haplotype |
SAMEA7522994 |
PRJEB45316 |
2021-07-07 |
fish
|
| 167 |
lumpfish[IGV] |
Cyclopterus lumpus |
GCA_009769515.1_fCycLum1.alt |
SAMN12629502 |
PRJNA562004 |
2019-12-19 |
fish
|
| 168 |
lumpfish (primary hap v2.1 2023 genbank)[IGV] |
Cyclopterus lumpus |
GCA_963457625.1_fCycLum2.1 |
SAMEA112789128 |
PRJEB66140 |
2023-09-20 |
fish
|
| 169 |
maguari stork (bCicMag1 alternate hap 2021)[IGV] |
Ciconia maguari |
GCA_017639665.1_bCicMag1.alt |
SAMN18353822 |
PRJNA715732 |
2021-03-30 |
birds
|
| 170 |
marbled rockcod (alternate hap 2023)[IGV] |
Notothenia rossii |
GCA_949606865.1_fNotRos5.1_alternate_haplotype |
SAMEA12815441 |
PRJEB60488 |
2023-04-09 |
fish
|
| 171 |
Mauritius kestrel (alternate hap 2023)[IGV] |
Falco punctatus |
GCA_963210275.1_bFalPun1.1_alternate_haplotype |
SAMEA14356472 |
PRJEB65027 |
2023-08-19 |
birds
|
| 172 |
Mauritius parakeet (alternate hap 2023)[IGV] |
Psittacula echo |
GCA_963243765.1_bPsiEch3.1_alternate_haplotype |
SAMEA12361725 |
PRJEB65272 |
2023-08-20 |
birds
|
| 173 |
meadow viper (alternate hap 2022)[IGV] |
Vipera ursinii |
GCA_947247025.1_rVipUrs1.1_alternate_haplotype |
SAMEA12832258 |
PRJEB57182 |
2022-10-30 |
reptiles
|
| 174 |
Mexican gopher tortoise (WGS:JAMKFD01 2022)[IGV] |
Gopherus flavomarginatus |
GCA_025201965.1_rGopFla2.pat.asm |
SAMN24199108 |
PRJNA794189 |
2022-09-08 |
reptiles
|
| 175 |
milkfish[IGV] |
Chanos chanos |
GCA_902362175.1_fChaCha1.1_alternate_haplotype |
SAMEA5159473 |
PRJEB33881 |
2019-08-16 |
fish
|
| 176 |
minke whale (alternate hap 2023)[IGV] |
Balaenoptera acutorostrata |
GCA_950005055.1_mBalAcu1.1_alternate_haplotype |
SAMEA111380540 |
PRJEB61580 |
2023-04-29 |
mammals
|
| 177 |
monito del monte (mDroGli1 alternate hap 2021)[IGV] |
Dromiciops gliroides |
GCA_019395325.1_mDroGli1.alt |
SAMN18857598 |
PRJNA728142 |
2021-07-29 |
mammals
|
| 178 |
mute swan (bCygOlo1 v2 alternate hap 2021)[IGV] |
Cygnus olor |
GCA_009769485.2_bCygOlo1.alt.v2 |
SAMN12621369 |
PRJNA561961 |
2021-03-30 |
birds
|
| 179 |
Nelson's sparrow (bAmmNel1 alternate hap 2023)[IGV] |
Ammospiza nelsoni |
GCA_027579665.1_bAmmNel1.alt |
SAMN28421656 |
PRJNA839457 |
2023-01-06 |
birds
|
| 180 |
New Caledonian crow[IGV] |
Corvus moneduloides |
GCA_009651025.1_bCorMon1.alt |
SAMN12368441 |
PRJNA560982 |
2019-11-12 |
birds
|
| 181 |
New Zealand spotty[IGV] |
Notolabrus celidotus |
GCA_009762545.1_fNotCel1.alt |
SAMN12623201 |
PRJNA561957 |
2019-12-17 |
fish
|
| 182 |
nine-banded armadillo (mDasNov1 hap1 2023)[IGV] |
Dasypus novemcinctus |
GCA_030445055.1_mDasNov1.hap1 |
SAMN32738980 |
PRJNA923799 |
2023-07-13 |
mammals
|
| 183 |
ninespine stickleback (alternate hap 2023)[IGV] |
Pungitius pungitius |
GCA_949316245.1_fPunPun2.1_alternate_haplotype |
SAMEA11296545 |
PRJEB60135 |
2023-04-08 |
fish
|
| 184 |
North American porcupine (mEreDor1 alternate hap 2023)[IGV] |
Erethizon dorsatum |
GCA_028500835.1_mEreDor1.alt |
SAMN32359106 |
PRJNA915122 |
2023-02-03 |
mammals
|
| 185 |
North Atlantic right whale (mEubGla1 hap2 2023)[IGV] |
Eubalaena glacialis |
GCA_028564815.1_mEubGla1.hap2 |
SAMN32746534 |
PRJNA924128 |
2023-02-09 |
mammals
|
| 186 |
North Atlantic right whale (hap1 2023)[IGV] |
Eubalaena glacialis |
GCA_028571275.1_mEubGla1.hap1 |
SAMN32746534 |
PRJNA924127 |
2023-02-09 |
mammals
|
| 187 |
northern pike[IGV] |
Esox lucius |
GCA_011004835.1_fEsoLuc1.alt |
SAMN12623624 |
PRJNA561978 |
2020-02-24 |
fish
|
| 188 |
northern gannet (hap1 2023)[IGV] |
Morus bassanus |
GCA_031468805.1_bMorBas2.hap1 |
SAMN37096299 |
PRJNA1009680 |
2023-09-15 |
birds
|
| 189 |
northern goshawk (bAccGen1 v1 alternate hap 2022)[IGV] |
Accipiter gentilis |
GCA_929447715.1_bAccGen1.1_alternate_haplotype |
SAMEA8235650 |
PRJEB50703 |
2022-02-13 |
birds
|
| 190 |
northern bottlenose whale (alternate hap 2023)[IGV] |
Hyperoodon ampullatus |
GCA_949752845.1_mHypAmp2.1_alternate_haplotype |
SAMEA10839125 |
PRJEB60894 |
2023-04-09 |
mammals
|
| 191 |
northern bat (alternate hap 2023)[IGV] |
Eptesicus nilssonii |
GCA_951640545.1_mEptNil1.1_alternate_haplotype |
SAMEA14098186 |
PRJEB62201 |
2023-05-18 |
mammals
|
| 192 |
Norway rat BN7 haplotype[IGV] |
Rattus norvegicus |
GCA_015244455.1_mRatBN7.1_alternate_haplotype |
SAMN16261960 |
PRJNA663241 |
2020-11-04 |
mammals
|
| 193 |
olive python (hap2 2023)[IGV] |
Liasis olivaceus |
GCA_030867085.1_rLiaOli1.hap2 |
SAMN32739907 |
PRJNA923813 |
2023-08-24 |
reptiles
|
| 194 |
orange-tipped seq squirt (alternate hap 2023)[IGV] |
Corella eumyota |
GCA_963082865.1_kaCorEumy4.1_alternate_haplotype |
SAMEA7536466 |
PRJEB64847 |
2023-08-08 |
otherChordates
|
| 195 |
orbiculate cardinalfish[IGV] |
Sphaeramia orbicularis |
GCA_902148825.1_fSphaOr1.1_alternate_haplotype |
SAMEA4966328 |
PRJEB33176 |
2019-07-03 |
fish
|
| 196 |
painted frog (alternate hap 2022)[IGV] |
Discoglossus pictus |
GCA_027410455.1_aDisPic1.alt |
SAMN32227109 |
PRJNA912128 |
2022-12-27 |
amphibians
|
| 197 |
pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 alternate hap 2020)[IGV] |
Phyllostomus discolor |
GCA_004115245.2_mPhyDis1.alti.v3 |
SAMN09948786 |
PRJNA489142 |
2020-05-11 |
mammals
|
| 198 |
peladilla (fAplTae1 alternate hap 2021)[IGV] |
Aplochiton taeniatus |
GCA_017639685.1_fAplTae1.alt |
SAMN12623621 |
PRJNA561972 |
2021-03-30 |
fish
|
| 199 |
peregrine falcon (bFalPer1 alternate hap 2022)[IGV] |
Falco peregrinus |
GCA_023634185.1_bFalPer1.alt |
SAMN28688290 |
PRJNA842833 |
2022-06-01 |
birds
|
| 200 |
Philippine flying lemur (mCynVol1 alternate hap 2022)[IGV] |
Cynocephalus volans |
GCA_027409165.1_mCynVol1.alt |
SAMN32206947 |
PRJNA911845 |
2022-12-27 |
mammals
|
| 201 |
pinecone soldierfish[IGV] |
Myripristis murdjan |
GCA_902148815.1_fMyrMur1.1_alternate_haplotype |
SAMEA4872133 |
PRJEB33187 |
2019-07-03 |
fish
|
| 202 |
pink pigeon (alternate hap 2023)[IGV] |
Nesoenas mayeri |
GCA_963082445.1_bNesMay2.1_alternate_haplotype |
SAMEA12922160 |
PRJEB64782 |
2023-08-08 |
birds
|
| 203 |
plains spadefoot toad (alternate hap 2022)[IGV] |
Spea bombifrons |
GCA_027382365.2_aSpeBom1.2.alt |
SAMN28408467 |
PRJNA838346 |
2022-12-27 |
amphibians
|
| 204 |
platypus (alternate hap Pmale09 2020)[IGV] |
Ornithorhynchus anatinus |
GCA_004115175.2_mOrnAna1.alt.v3 |
SAMN08537700 |
PRJNA489115 |
2020-04-06 |
mammals
|
| 205 |
plumbeous ibis (bTheCae1 alternate hap 2021)[IGV] |
Theristicus caerulescens |
GCA_020745805.1_bTheCae1.alt.cur |
SAMN22550094 |
PRJNA774321 |
2021-11-05 |
birds
|
| 206 |
pollack (alternate hap 2023)[IGV] |
Pollachius pollachius |
GCA_949987605.1_fPolPol2.1_alternate_haplotype |
SAMEA111562038 |
PRJEB61574 |
2023-04-29 |
fish
|
| 207 |
prehistoric monster fish[IGV] |
Thalassophryne amazonica |
GCA_902500245.1_fThaAma1.1_alternate_haplotype |
SAMEA104129913 |
PRJEB34605 |
2019-09-30 |
fish
|
| 208 |
pygmy sperm whale (mKogBre1 haplotype 2 2022)[IGV] |
Kogia breviceps |
GCA_026419985.1_mKogBre1_haplotype_2 |
SAMN31719513 |
PRJNA901931 |
2022-11-27 |
mammals
|
| 209 |
razorbill[IGV] |
Alca torda |
GCA_008658355.1_bAlcTor1_alternate |
SAMN12292087 |
PRJNA554521 |
2019-09-23 |
birds
|
| 210 |
red deer (alternate hap 2021)[IGV] |
Cervus elaphus |
GCA_910593805.1_mCerEla1.1_alternate_haplotype |
SAMEA7523520 |
PRJEB45837 |
2021-07-07 |
mammals
|
| 211 |
red-bellied piranha (fPygNat1 alternate hap 2020)[IGV] |
Pygocentrus nattereri |
GCA_015220065.1_fPygNat1.alt |
SAMN12623623 |
PRJNA561976 |
2020-11-02 |
fish
|
| 212 |
red-crested turaco[IGV] |
Tauraco erythrolophus |
GCA_009764505.1_bTauEry1.alt |
SAMN12621036 |
PRJNA561948 |
2019-12-18 |
birds
|
| 213 |
Red-fronted tinkerbird (bPogPus1 alternate hap 2020)[IGV] |
Pogoniulus pusillus |
GCA_015220175.1_bPogPus1.alt |
SAMN15098508 |
PRJNA637954 |
2020-11-02 |
birds
|
| 214 |
red-legged seriema[IGV] |
Cariama cristata |
GCA_009819485.1_bCarCri1.alt |
SAMN12614807 |
PRJNA561893 |
2019-12-23 |
birds
|
| 215 |
red-throated loon (hap1 2023)[IGV] |
Gavia stellata |
GCA_030936125.1_bGavSte3.hap1 |
SAMN37096312 |
PRJNA1008846 |
2023-08-30 |
birds
|
| 216 |
red-throated loon (hap2 2023 genbank)[IGV] |
Gavia stellata |
GCA_030936135.1_bGavSte3.hap2 |
SAMN37096312 |
PRJNA1008847 |
2023-08-30 |
birds
|
| 217 |
reedfish[IGV] |
Erpetoichthys calabaricus |
GCA_900700845.2_fErpCal1.1_alternate_haplotype |
SAMEA104026374 |
PRJEB31582 |
2019-03-27 |
fish
|
| 218 |
reedfish (alternate hap 2021)[IGV] |
Erpetoichthys calabaricus |
GCA_900700845.3_fErpCal1.3_alternate_haplotype |
SAMEA104026374 |
PRJEB31582 |
2021-07-07 |
fish
|
| 219 |
Rice's whale (hap1 2023)[IGV] |
Balaenoptera ricei |
GCA_028017805.1_mBalRic1.hap1 |
SAMN32629060 |
PRJNA921697 |
2023-01-26 |
mammals
|
| 220 |
Rice's whale (hap2 2023 genbank)[IGV] |
Balaenoptera ricei |
GCA_028023285.1_mBalRic1.hap2 |
SAMN32629060 |
PRJNA921698 |
2023-01-30 |
mammals
|
| 221 |
rifleman (bAcaChl1 alternate hap 2021)[IGV] |
Acanthisitta chloris |
GCA_016880875.1_bAcaChl1.alt |
SAMN16442762 |
PRJNA561955 |
2021-02-10 |
birds
|
| 222 |
ring-tailed lemur (mLemCat1 alternate hap 2021)[IGV] |
Lemur catta |
GCA_020740595.1_mLemCat1.alt |
SAMN12621102 |
PRJNA561950 |
2021-11-03 |
primates
|
| 223 |
roach minnow (alternate hap 2023)[IGV] |
Rutilus rutilus |
GCA_951802655.1_fRutRut2.1_alternate_haplotype |
SAMEA11296543 |
PRJEB62671 |
2023-05-29 |
fish
|
| 224 |
rock ptarmigan (bLagMut1 alternate hap 2022)[IGV] |
Lagopus muta |
GCA_023344045.1_bLagMut1_alternate |
SAMN25144835 |
PRJNA836585 |
2022-05-12 |
birds
|
| 225 |
rock gunnel (alternate hap 2021)[IGV] |
Pholis gunnellus |
GCA_910591705.2_fPhoGun1.2_alternate_haplotype |
SAMEA7522838 |
PRJEB45448 |
2021-11-18 |
fish
|
| 226 |
Rosablanca catfish (hap2 2023)[IGV] |
Trichomycterus rosablanca |
GCA_030015355.1_fTriRos1.hap2 |
SAMN32755940 |
PRJNA924297 |
2023-05-15 |
fish
|
| 227 |
royal ground snake (hap3 2023)[IGV] |
Erythrolamprus reginae |
GCA_031001685.1_rEryReg1.hap3 |
SAMN32631248 |
PRJNA996865 |
2023-08-30 |
reptiles
|
| 228 |
royal ground snake (hap2 2023)[IGV] |
Erythrolamprus reginae |
GCA_031021085.1_rEryReg1.hap2 |
SAMN32631248 |
PRJNA921729 |
2023-08-30 |
reptiles
|
| 229 |
rufous frog (hap1 2023)[IGV] |
Leptodactylus fuscus |
GCA_031893025.1_aLepFus1.hap1 |
SAMN37055805 |
PRJNA1007263 |
2023-09-26 |
amphibians
|
| 230 |
saddleback dolphin (alternate hap 2023)[IGV] |
Delphinus delphis |
GCA_949987525.1_mDelDel1.1_alternate_haplotype |
SAMEA111380534 |
PRJEB61572 |
2023-04-29 |
mammals
|
| 231 |
Saker falcon (bFalChe1 alternate hap 2022)[IGV] |
Falco cherrug |
GCA_023634115.1_bFalChe1.alt |
SAMN28688204 |
PRJNA842830 |
2022-06-01 |
birds
|
| 232 |
saltmarsh sparrow (bAmmCau1 alternate hap 2023)[IGV] |
Ammospiza caudacuta |
GCA_027887135.1_bAmmCau1.alt |
SAMN28421630 |
PRJNA839451 |
2023-01-17 |
birds
|
| 233 |
sand lizard[IGV] |
Lacerta agilis |
GCA_009819545.1_rLacAgi1.alt |
SAMN12629509 |
PRJNA562019 |
2019-12-23 |
reptiles
|
| 234 |
Sardinian treefrog (hap2 2023)[IGV] |
Hyla sarda |
GCA_029493135.1_aHylSar1.hap2 |
SAMN32629340 |
PRJNA921708 |
2023-03-30 |
amphibians
|
| 235 |
sea lamprey[IGV] |
Petromyzon marinus |
GCA_010993595.1_kPetMar1.alt |
SAMN12629506 |
PRJNA562012 |
2020-02-24 |
otherChordates
|
| 236 |
shanny (alternate hap 2023)[IGV] |
Lipophrys pholis |
GCA_963383635.1_fLipPho2.1_alternate_haplotype |
SAMEA7522844 |
PRJEB65341 |
2023-08-26 |
fish
|
| 237 |
Siamese fighting fish[IGV] |
Betta splendens |
GCA_900651605.1_fBetSpl5.1_alternate_haplotype |
SAMEA104381735 |
PRJEB30366 |
2019-02-07 |
fish
|
| 238 |
Siamese fighting fish (v5.4 alternate hap 2023)[IGV] |
Betta splendens |
GCA_900651605.2_fBetSpl5.4_alternate_haplotype |
SAMEA104381735 |
PRJEB30366 |
2023-04-08 |
fish
|
| 239 |
slow loris (mNycCou1 alternate hap 2022)[IGV] |
Nycticebus coucang |
GCA_027406535.1_mNycCou1.alt |
SAMN28408555 |
PRJNA838347 |
2022-12-27 |
primates
|
| 240 |
smaller spotted catshark (alternate hap 2021)[IGV] |
Scyliorhinus canicula |
GCA_902713625.2_sScyCan1.2_alternate_haplotype |
SAMEA994730 |
PRJEB35944 |
2021-01-28 |
sharks
|
| 241 |
smalleye Pacific opah (hap1 2023)[IGV] |
Lampris incognitus |
GCA_029633845.1_fLamInc1.hap1 |
SAMN34060140 |
PRJNA951789 |
2023-04-07 |
fish
|
| 242 |
smalltooth sawfish[IGV] |
Pristis pectinata |
GCA_009764485.1_sPriPec2.alt |
SAMN12629505 |
PRJNA562010 |
2019-12-18 |
sharks
|
| 243 |
soprano pipistrelle (alternate hap 2023)[IGV] |
Pipistrellus pygmaeus |
GCA_949987765.1_mPipPyg2.1_alternate_haplotype |
SAMEA9921456 |
PRJEB61582 |
2023-04-29 |
mammals
|
| 244 |
South Island takahe (alternate hap 2021)[IGV] |
Porphyrio hochstetteri |
GCA_020801775.1_bPorHoc1.pat.decon |
SAMN22550412 |
PRJNA774332 |
2021-11-08 |
birds
|
| 245 |
southern two-toed sloth (mChoDid1 alternate hap 2020)[IGV] |
Choloepus didactylus |
GCA_015220265.1_mChoDid1.alt |
SAMN12612024 |
PRJNA561938 |
2020-11-02 |
mammals
|
| 246 |
southern tamandua (mTamTet1 alternate hap 2022)[IGV] |
Tamandua tetradactyla |
GCA_023853755.1_mTamTet1.alt |
SAMN12612337 |
PRJNA561940 |
2022-06-22 |
mammals
|
| 247 |
southern bluefin tuna (alternate hap 2021)[IGV] |
Thunnus maccoyii |
GCA_910596085.1_fThuMac1.1_alternate_haplotype |
SAMEA8654747 |
PRJEB46020 |
2021-07-07 |
fish
|
| 248 |
speckled mousebird (hap2 2023)[IGV] |
Colius striatus |
GCA_028858625.1_bColStr4.hap2 |
SAMN33339572 |
PRJNA936150 |
2023-02-24 |
birds
|
| 249 |
sterlet (fAciRut3.2 2022)[IGV] |
Acipenser ruthenus |
GCA_902713435.2_fAciRut3.2_paternal_haplotype |
SAMEA5572864 |
PRJEB35913 |
2022-02-01 |
fish
|
| 250 |
stone loach (alternate hap 2022)[IGV] |
Barbatula barbatula |
GCA_947034905.1_fBarBar1.1_alternate_haplotype |
SAMEA11296540 |
PRJEB56421 |
2022-10-08 |
fish
|
| 251 |
striped catfish (fPanHyp1 alternate hap 2022)[IGV] |
Pangasianodon hypophthalmus |
GCA_027382375.1_fPanHyp1.alt |
SAMN32348883 |
PRJNA914798 |
2022-12-27 |
fish
|
| 252 |
striped dolphin (alternate hap 2023)[IGV] |
Stenella coeruleoalba |
GCA_951394445.1_mSteCoe1.1_alternate_haplotype |
SAMEA111380539 |
PRJEB62075 |
2023-05-13 |
mammals
|
| 253 |
Suruca trogon (bTroSur1 alternate hap 2021)[IGV] |
Trogon surrucura |
GCA_020746095.1_bTroSur1.alt.cur |
SAMN22550082 |
PRJNA774296 |
2021-11-05 |
birds
|
| 254 |
Suwannee snapping turtle (hap1 2023)[IGV] |
Macrochelys suwanniensis |
GCA_033296515.1_rMacSuw1.hap1 |
SAMN37052244 |
PRJNA1006848 |
2023-11-06 |
reptiles
|
| 255 |
Swainson's thrush (bCatUst1 v2 alternate hap 2020)[IGV] |
Catharus ustulatus |
GCA_009819505.2_bCatUst1.alt.v2 |
SAMN12618602 |
PRJNA561934 |
2020-11-05 |
birds
|
| 256 |
swamp sparrow (bMelGeo1 alternate hap 2023)[IGV] |
Melospiza georgiana |
GCA_028019105.1_bMelGeo1.alt |
SAMN22787412 |
PRJNA915610 |
2023-01-26 |
birds
|
| 257 |
tammar wallaby (mMacEug1 alternate hap 2023)[IGV] |
Notamacropus eugenii |
GCA_028389975.1_mMacEug1.alt |
SAMN28408687 |
PRJNA838351 |
2023-02-01 |
mammals
|
| 258 |
tawny frogmouth (bPodStr1 alternate hap 2023)[IGV] |
Podargus strigoides |
GCA_028020675.1_bPodStr1.alt |
SAMN31801959 |
PRJNA912328 |
2023-01-26 |
birds
|
| 259 |
tawny owl (hap2 2023)[IGV] |
Strix aluco |
GCA_031877785.1_bStrAlu1.hap2 |
SAMN37055808 |
PRJNA1007266 |
2023-09-25 |
birds
|
| 260 |
thorny skate[IGV] |
Amblyraja radiata |
GCA_010909745.1_sAmbRad1.alt |
SAMN09948523 |
PRJNA591368 |
2020-02-14 |
sharks
|
| 261 |
tiger shark (hap2 2023)[IGV] |
Stegostoma tigrinum |
GCA_030684295.1_sSteTig4.hap2 |
SAMN35823397 |
PRJNA986594 |
2023-08-07 |
sharks
|
| 262 |
tiny Cayenne caecilian[IGV] |
Microcaecilia unicolor |
GCA_901765105.1_aMicUni1.1_alternate_haplotype |
SAMEA104387962 |
PRJEB32738 |
2019-07-08 |
amphibians
|
| 263 |
torafugu[IGV] |
Takifugu rubripes |
GCA_901000745.3_fTakRub1.2_alternate_haplotype |
SAMEA104384834 |
PRJEB31989 |
2019-06-05 |
fish
|
| 264 |
trahira (hap1 2023)[IGV] |
Hoplias malabaricus |
GCA_029633855.1_fHopMal1.hap1 |
SAMN32740525 |
PRJNA923842 |
2023-04-07 |
fish
|
| 265 |
tufted duck[IGV] |
Aythya fuligula |
GCA_009819845.1_bAytFul2.alt |
SAMN12621346 |
PRJNA561953 |
2019-12-23 |
birds
|
| 266 |
two-lined caecilian[IGV] |
Rhinatrema bivittatum |
GCA_901001175.1_aRhiBiv1.1_alternate_haplotype |
SAMEA104387956 |
PRJEB32112 |
2019-06-02 |
amphibians
|
| 267 |
vaquita (alternate hap mPhoSin1 2019)[IGV] |
Phocoena sinus |
GCA_008692045.1_mPhoSin1.alt |
SAMN12325353 |
PRJNA557832 |
2019-09-24 |
mammals
|
| 268 |
warty frogfish (fAntMac1 alternate hap 2020)[IGV] |
Antennarius maculatus |
GCA_013347815.1_fAntMac1.alt |
SAMN12623626 |
PRJNA561980 |
2020-06-12 |
fish
|
| 269 |
Western terrestrial garter snake[IGV] |
Thamnophis elegans |
GCA_009769695.1_rThaEle1.alt |
SAMN12629499 |
PRJNA561997 |
2019-12-19 |
reptiles
|
| 270 |
western European hedgehog (alternate hap 2023)[IGV] |
Erinaceus europaeus |
GCA_950295305.1_mEriEur2.1_alternate_haplotype |
SAMEA13207416 |
PRJEB61757 |
2023-05-01 |
mammals
|
| 271 |
western capercaillie (alternate hap 2023)[IGV] |
Tetrao urogallus |
GCA_951394355.1_bTetUro1.1_alternate_haplotype |
SAMEA9654429 |
PRJEB62069 |
2023-05-13 |
birds
|
| 272 |
whiskered treeswift (bHemCom1 alternate hap 2021)[IGV] |
Hemiprocne comata |
GCA_020745695.1_bHemCom1.alt.cur |
SAMN22588383 |
PRJNA774830 |
2021-11-05 |
birds
|
| 273 |
white-beaked dolphin (alternate hap 2023)[IGV] |
Lagenorhynchus albirostris |
GCA_949774935.1_mLagAlb1.1_alternate_haplotype |
SAMEA111380537 |
PRJEB60993 |
2023-04-09 |
mammals
|
| 274 |
white-tailed eagle (bHalAlb1.1 alternate hap 2022)[IGV] |
Haliaeetus albicilla |
GCA_947461935.1_bHalAlb1.1_alternate_haplotype |
SAMEA12857288 |
PRJEB57864 |
2022-12-02 |
birds
|
| 275 |
white-toothed pygmy shrew (mSunEtr1 alternate hap 2022)[IGV] |
Suncus etruscus |
GCA_024140225.1_mSunEtr1.alt.cur |
SAMN28420931 |
PRJNA839355 |
2022-07-05 |
mammals
|
| 276 |
white-tufted-ear marmoset (v1.2 paternal 2021)[IGV] |
Callithrix jacchus |
GCA_011100535.2_mCalJac1.2.pat |
SAMN12368443 |
PRJNA558087 |
2021-04-28 |
primates
|
| 277 |
whooping crane (paternal hap 2023)[IGV] |
Grus americana |
GCA_028858595.1_bGruAme1.pat |
SAMN32775697 |
PRJNA924954 |
2023-02-24 |
birds
|
| 278 |
yellow-spotted hyrax (mHetBru1 alternate hap 2023)[IGV] |
Heterohyrax brucei |
GCA_028571665.1_mHetBru1.alt |
SAMN33092455 |
PRJNA931598 |
2023-02-08 |
mammals
|
| 279 |
yellow-throated sandgrouse[IGV] |
Pterocles gutturalis |
GCA_009769505.1_bPteGut1.alt |
SAMN12623217 |
PRJNA561959 |
2019-12-19 |
birds
|
| 280 |
yellowfin seabream (v.2019 alternate hap 2020)[IGV] |
Acanthopagrus latus |
GCA_904848175.1_fAcaLat1.1_alternate_haplotype |
SAMN16236878 |
PRJEB40701 |
2020-10-12 |
fish
|
| 281 |
yellowfin tuna (alternate hap 2021)[IGV] |
Thunnus albacares |
GCA_914744365.1_fThuAlb1.1_alternate_haplotype |
SAMEA8654749 |
PRJEB47266 |
2021-09-15 |
fish
|
| 282 |
zebra finch (Black17 v1.4 alternate hap 2021)[IGV] |
Taeniopygia guttata |
GCA_003957525.2_bTaeGut1.4.alt |
SAMN02981239 |
PRJNA489099 |
2021-04-28 |
birds
|
| 283 |
zebra finch (alternate hap Blue55 v1 2020)[IGV] |
Taeniopygia guttata |
GCA_009859025.1_bTaeGut2.p.v1.alt |
SAMN09946140 |
PRJNA489187 |
2020-01-13 |
birds
|
| 284 |
zebrafish (WGS:CAHPTB02 2020)[IGV] |
Danio rerio |
GCA_903684855.2_fDreTuH1.2 |
SAMEA4760849 |
PRJEB38588 |
2020-07-31 |
fish
|
| 285 |
zebrafish (WGS:CAHPTA01 2020)[IGV] |
Danio rerio |
GCA_903684865.1_fDreABH1.1 |
SAMEA4760846 |
PRJEB38589 |
2020-06-28 |
fish
|
| 286 |
zebrafish (fDanRer4 alternate hap 2022)[IGV] |
Danio rerio |
GCA_944039255.1_fDanRer4.1_alternate_haplotype |
SAMEA14088276 |
PRJEB53408 |
2022-06-17 |
fish
|
| 287 |
zig-zag eel[IGV] |
Mastacembelus armatus |
GCA_900700395.1_fMasArm1.2_alternate_haplotype |
SAMEA104026378 |
PRJEB31553 |
2019-04-01 |
fish
|
