Primates Genomes assembly hubs

Assemblies from NCBI/Genbank/Refseq sources, subset of primates only.

How to view the hub

Options:

  1. The links to the genome browser in the table below will attach that one specific assembly to the genome browser. This is most likely what you want. Alternatively, the entire set of assemblies can be attached as one group to the genome browser with the following links depending upon which of our mirror site browsers you prefer to use:
    attach all assemblies to selected site:   genome.ucsc.edu   genome-euro.ucsc.edu   genome-asia.ucsc.edu
  2. To manually attach all the assemblies in this hub to genome browsers that are not one of the three UCSC mirror sites:
    1. From the blue navigation bar, go to My Data -> Track Hubs
    2. Then select the My Hubs tab and enter this URL into the textbox:
      https://hgdownload.soe.ucsc.edu/hubs/primates/hub.txt
    3. Once you have added the URL to the entry form, press the Add Hub button to add the hub.

After adding the hub, you will be redirected to the gateway page. The genome assemblies can be selected from the Primates Hub Assembly dropdown menu. Instead of adding all the assemblies in one collected group, use the individual view in browser in the table below.

See also: assembly statistics, track statistics <== additional information for these assemblies.


Data resource links

NOTE: Click on the column headers to sort the table by that column

The common name and view in browser will attach only that single assembly to the genome browser.
The scientific name and data download link provides access to the files for that one assembly hub.
The other links provide access to NCBI resources for these assemblies.
count common name and
view in browser		 scientific name
and data download		 NCBI assembly BioSample BioProject assembly date,
source link
1 Angolan colobus Colobus angolensis palliatus GCF_000951035.1_Cang.pa_1.0 SAMN03121814 PRJNA251421 2015-03-12
2 aye-aye Daubentonia madagascariensis GCA_004027145.1_DauMad_v1_BIUU SAMN07678077 PRJNA399387 2019-01-16
3 babakoto Indri indri GCA_004363605.1_IndInd_v1_BIUU SAMN07678091 PRJNA399458 2019-03-22
4 black snub-nosed monkey (Rb0 v2 refseq 2016) Rhinopithecus bieti GCF_001698545.2_ASM169854v2 SAMN02786331 PRJNA315476 2016-08-03
5 black-handed spider monkey Ateles geoffroyi GCA_004024785.1_AteGeo_v1_BIUU SAMN07678064 PRJNA399374 2019-01-15
6 Bolivian titi Plecturocebus donacophilus GCA_004027715.1_CalDon_v1_BIUU SAMN07678140 PRJNA399376 2019-01-16
7 Bolivian squirrel monkey (100643 v2.1 BCM 2021) Saimiri boliviensis boliviensis GCF_016699345.2_BCM_Sbol_2.1 SAMN16846876 PRJNA679316 2021-01-12
8 Bornean orangutan (AG05252 primary hap 2023) Pongo pygmaeus GCF_028885625.1_NHGRI_mPonPyg2-v1.1-hic.freeze_pri SAMN10521809 PRJNA916742 2023-02-28
9 brown lemur Eulemur fulvus GCA_004027275.1_EulFul_v1_BIUU SAMN07678083 PRJNA399393 2019-01-16
10 chimpanzee (Clint C0471 2018) Pan troglodytes GCF_002880755.1_Clint_PTRv2 SAMN06272697 PRJNA369439 2018-01-19
11 chimpanzee (AG18354 primary hap 2023) Pan troglodytes GCF_028858775.1_NHGRI_mPanTro3-v1.1-hic.freeze_pri SAMN30216104 PRJNA916736 2023-02-27
12 Coquerel's mouse lemur Mirza coquereli GCA_004024645.1_MizCoq_v1_BIUU SAMN07678095 PRJNA399404 2019-01-15
13 Coquerel's sifaka 6110/Marcella (2015 refseq) Propithecus coquereli GCF_000956105.1_Pcoq_1.0 SAMN03121823 PRJNA251429 2015-03-23
14 crab-eating macaque (2020 cy0333) Macaca fascicularis GCA_011100615.1_Macaca_fascicularis_6.0 SAMN14146612 PRJNA607781 2020-03-10
15 crab-eating macaque CE1976F Keio U/RIKEN 2021 Macaca fascicularis GCF_012559485.2_MFA1912RKSv2 SAMD00204697 PRJDB9269 2021-10-26
16 De Brazza's monkey Cercopithecus neglectus GCA_004027615.1_CertNeg_v1_BIUU SAMN07678070 PRJNA399380 2019-01-16
17 drill Mandrillus leucophaeus GCF_000951045.1_Mleu.le_1.0 SAMN03121813 PRJNA251423 2015-03-12
18 Francois's langur Trachypithecus francoisi GCF_009764315.1_Tfra_2.0 SAMN12630612 PRJNA488530 2019-12-18
19 gelada Theropithecus gelada GCF_003255815.1_Tgel_1.0 SAMN09197221 PRJNA470999 2018-06-19
20 golden snub-nosed monkey (2019 Northwest U) Rhinopithecus roxellana GCF_007565055.1_ASM756505v1 SAMN11039125 PRJNA524949 2019-07-29
21 gray mouse lemur Microcebus murinus GCF_000165445.2_Mmur_3.0 SAMN06275470 PRJNA19967 2017-02-06
22 green monkey 1994-021 (2014 refseq) Chlorocebus sabaeus GCF_000409795.2_Chlorocebus_sabeus_1.1 SAMN01760484 PRJNA168621 2014-03-25
23 green monkey WHO RCB 10-87 Chlorocebus sabaeus GCF_015252025.1_Vero_WHO_p1.0 SAMN15458746 PRJNA644395 2020-11-06
24 Hanuman langur Semnopithecus entellus GCA_004025065.1_SemEnt_v1_BIUU SAMN07678111 PRJNA399419 2019-01-15
25 human (HG00438.mat 2021) Homo sapiens GCA_018471515.1_HG00438.pri.mat.f1_v2 SAMN17861652 PRJNA726273 2021-05-24
26 human (HG00438.pat 2021) Homo sapiens GCA_018472595.1_HG00438.alt.pat.f1_v2 SAMN17861652 PRJNA726272 2021-05-24
27 human (HG00621.mat 2021) Homo sapiens GCA_018472605.1_HG00621.pri.mat.f1_v2 SAMN17861653 PRJNA726275 2021-05-24
28 human (HG00621.pat 2021) Homo sapiens GCA_018472575.1_HG00621.alt.pat.f1_v2 SAMN17861653 PRJNA726274 2021-05-24
29 human (HG00673.mat 2021) Homo sapiens GCA_018472565.1_HG00673.pri.mat.f1_v2 SAMN17861654 PRJNA726271 2021-05-24
30 human (HG00673.pat 2021) Homo sapiens GCA_018472585.1_HG00673.alt.pat.f1_v2 SAMN17861654 PRJNA726270 2021-05-24
31 human (HG00733.mat 2021) Homo sapiens GCA_018506975.1_HG00733.pri.mat.f1_v2 SAMN00006581 PRJNA727433 2021-05-26
32 human (HG00733.pat 2021) Homo sapiens GCA_018506955.1_HG00733.alt.pat.f1_v2 SAMN00006581 PRJNA727432 2021-05-26
33 human (HG00735.pat 2021) Homo sapiens GCA_018472715.1_HG00735.alt.pat.f1_v2 SAMN17861655 PRJNA726278 2021-05-24
34 human (HG00735.mat 2021) Homo sapiens GCA_018472765.1_HG00735.pri.mat.f1_v2 SAMN17861655 PRJNA726279 2021-05-24
35 human (HG00741.mat 2021) Homo sapiens GCA_018471095.1_HG00741.pri.mat.f1_v2 SAMN17861656 PRJNA726225 2021-05-24
36 human (HG00741.pat 2021) Homo sapiens GCA_018471105.1_HG00741.alt.pat.f1_v2 SAMN17861656 PRJNA726224 2021-05-24
37 human (HG01071.mat 2021) Homo sapiens GCA_018472685.1_HG01071.pri.mat.f1_v2 SAMN17861657 PRJNA726277 2021-05-24
38 human (HG01071.pat 2021) Homo sapiens GCA_018472725.1_HG01071.alt.pat.f1_v2 SAMN17861657 PRJNA726276 2021-05-24
39 human (HG01106.mat 2021) Homo sapiens GCA_018471345.1_HG01106.pri.mat.f1_v2 SAMN17861658 PRJNA726229 2021-05-24
40 human (HG01106.pat 2021) Homo sapiens GCA_018471075.1_HG01106.alt.pat.f1_v2 SAMN17861658 PRJNA726228 2021-05-24
41 human (HG01109.mat 2021) Homo sapiens GCA_018504365.1_HG01109.pri.mat.f1_v2 SAMN12162846 PRJNA727363 2021-05-26
42 human (HG01109.pat 2021) Homo sapiens GCA_018504645.1_HG01109.alt.pat.f1_v2 SAMN12162846 PRJNA727362 2021-05-26
43 human (HG01123.mat 2021) Homo sapiens GCA_018469665.1_HG01123.pri.mat.f1_v2.1 SAMN17861232 PRJNA725610 2021-05-24
44 human (HG01123.pat 2021) Homo sapiens GCA_018469695.1_HG01123.alt.pat.f1_v2.1 SAMN17861232 PRJNA725609 2021-05-24
45 human (HG01175.mat 2021) Homo sapiens GCA_018471085.1_HG01175.pri.mat.f1_v2 SAMN17861659 PRJNA726227 2021-05-24
46 human (HG01175.pat 2021) Homo sapiens GCA_018471065.1_HG01175.alt.pat.f1_v2 SAMN17861659 PRJNA726226 2021-05-24
47 human (HG01243.mat 2021) Homo sapiens GCA_018504375.1_HG01243.pri.mat.f1_v2 SAMN13957917 PRJNA727361 2021-05-26
48 human (HG01243.pat 2021) Homo sapiens GCA_018504045.1_HG01243.alt.pat.f1_v2 SAMN13957917 PRJNA727360 2021-05-26
49 human (HG01258.mat 2021) Homo sapiens GCA_018469405.1_HG01258.pri.mat.f1_v2 SAMN17861233 PRJNA725606 2021-05-24
50 human (HG01258.pat 2021) Homo sapiens GCA_018469675.1_HG01258.alt.pat.f1_v2 SAMN17861233 PRJNA725605 2021-05-24
51 human (HG01358.mat 2021) Homo sapiens GCA_018469865.1_HG01358.pri.mat.f1_v2.1 SAMN17861234 PRJNA725612 2021-05-24
52 human (HG01358.pat 2021) Homo sapiens GCA_018469965.1_HG01358.alt.pat.f1_v2.1 SAMN17861234 PRJNA725611 2021-05-24
53 human (HG01361.mat 2021) Homo sapiens GCA_018469685.1_HG01361.pri.mat.f1_v2 SAMN17861235 PRJNA725608 2021-05-24
54 human (HG01361.pat 2021) Homo sapiens GCA_018469705.1_HG01361.alt.pat.f1_v2 SAMN17861235 PRJNA725607 2021-05-24
55 human (HG01891.mat 2021) Homo sapiens GCA_018467155.1_HG01891.pri.mat.f1_v2 SAMN17861236 PRJNA723023 2021-05-24
56 human (HG01891.pat 2021) Homo sapiens GCA_018467165.1_HG01891.alt.pat.f1_v2 SAMN17861236 PRJNA723022 2021-05-24
57 human (HG01928.mat 2021) Homo sapiens GCA_018472695.1_HG01928.pri.mat.f1_v2 SAMN17861660 PRJNA726174 2021-05-24
58 human (HG01928.pat 2021) Homo sapiens GCA_018472705.1_HG01928.alt.pat.f1_v2 SAMN17861660 PRJNA726173 2021-05-24
59 human (HG01952.mat 2021) Homo sapiens GCA_018471545.1_HG01952.pri.mat.f1_v2 SAMN17861661 PRJNA726231 2021-05-24
60 human (HG01952.pat 2021) Homo sapiens GCA_018471555.1_HG01952.alt.pat.f1_v2 SAMN17861661 PRJNA726230 2021-05-24
61 human (HG01978.mat 2021) Homo sapiens GCA_018472865.1_HG01978.pri.mat.f1_v2 SAMN17861662 PRJNA726176 2021-05-24
62 human (HG01978.pat 2021) Homo sapiens GCA_018472845.1_HG01978.alt.pat.f1_v2 SAMN17861662 PRJNA726175 2021-05-24
63 human (HG02055.mat 2021) Homo sapiens GCA_018506125.1_HG02055.pri.mat.f1_v2 SAMN12162856 PRJNA727422 2021-05-26
64 human (HG02055.pat 2021) Homo sapiens GCA_018505855.1_HG02055.alt.pat.f1_v2 SAMN12162856 PRJNA727421 2021-05-26
65 human (HG02080.mat 2021) Homo sapiens GCA_018504085.1_HG02080.pri.mat.f1_v2 SAMN13957942 PRJNA727359 2021-05-26
66 human (HG02080.pat 2021) Homo sapiens GCA_018504055.1_HG02080.alt.pat.f1_v2 SAMN13957942 PRJNA727358 2021-05-26
67 human (HG02109.mat 2021) Homo sapiens GCA_018505825.1_HG02109.pri.mat.f1_v2 SAMN13958415 PRJNA727418 2021-05-26
68 human (HG02109.pat 2021) Homo sapiens GCA_018505865.1_HG02109.alt.pat.f1_v2 SAMN13958415 PRJNA727417 2021-05-26
69 human (HG02145.mat 2021) Homo sapiens GCA_018852585.1_HG02145.pri.mat.f1_v2 SAMN13961514 PRJNA727416 2021-06-11
70 human (HG02145.pat 2021) Homo sapiens GCA_018852595.1_HG02145.alt.pat.f1_v2 SAMN13961514 PRJNA727415 2021-06-11
71 human (HG02148.pat 2021) Homo sapiens GCA_018471525.1_HG02148.alt.pat.f1_v2 SAMN17861663 PRJNA726232 2021-05-24
72 human (HG02148.mat 2021) Homo sapiens GCA_018471535.1_HG02148.pri.mat.f1_v2 SAMN17861663 PRJNA726233 2021-05-24
73 human (HG02257.mat 2021) Homo sapiens GCA_018466845.1_HG02257.pri.mat.f1_v2 SAMN17861237 PRJNA723017 2021-05-24
74 human (HG02257.pat 2021) Homo sapiens GCA_018466835.1_HG02257.alt.pat.f1_v2 SAMN17861237 PRJNA723016 2021-05-24
75 human (HG02486.mat 2021) Homo sapiens GCA_018467015.1_HG02486.pri.mat.f1_v2 SAMN17861238 PRJNA723021 2021-05-24
76 human (HG02486.pat 2021) Homo sapiens GCA_018467005.1_HG02486.alt.pat.f1_v2 SAMN17861238 PRJNA723020 2021-05-24
77 human (HG02559.mat 2021) Homo sapiens GCA_018466985.1_HG02559.pri.mat.f1_v2 SAMN17861239 PRJNA723019 2021-05-24
78 human (HG02559.pat 2021) Homo sapiens GCA_018466855.1_HG02559.alt.pat.f1_v2 SAMN17861239 PRJNA723018 2021-05-24
79 human (HG02572.mat 2021) Homo sapiens GCA_018470445.1_HG02572.pri.mat.f1_v2 SAMN17861240 PRJNA725863 2021-05-24
80 human (HG02572.pat 2021) Homo sapiens GCA_018470435.1_HG02572.alt.pat.f1_v2 SAMN17861240 PRJNA725862 2021-05-24
81 human (HG02622.mat 2021) Homo sapiens GCA_018469875.1_HG02622.pri.mat.f1_v2 SAMN17861664 PRJNA725855 2021-05-24
82 human (HG02622.pat 2021) Homo sapiens GCA_018469925.1_HG02622.alt.pat.f1_v2 SAMN17861664 PRJNA725854 2021-05-24
83 human (HG02630.pat 2021) Homo sapiens GCA_018469945.1_HG02630.alt.pat.f1_v2 SAMN17861665 PRJNA725856 2021-05-24
84 human (HG02630.mat 2021) Homo sapiens GCA_018469955.1_HG02630.pri.mat.f1_v2 SAMN17861665 PRJNA725857 2021-05-24
85 human (HG02717.mat 2021) Homo sapiens GCA_018469935.1_HG02717.pri.mat.f1_v2 SAMN17861666 PRJNA725859 2021-05-24
86 human (HG02717.pat 2021) Homo sapiens GCA_018470425.1_HG02717.alt.pat.f1_v2 SAMN17861666 PRJNA725858 2021-05-24
87 human (HG02723.mat 2021) Homo sapiens GCA_018504065.1_HG02723.pri.mat.f1_v2 SAMN13958364 PRJNA727349 2021-05-26
88 human (HG02723.pat 2021) Homo sapiens GCA_018504075.1_HG02723.alt.pat.f1_v2 SAMN13958364 PRJNA727348 2021-05-26
89 human (HG02818.mat 2021) Homo sapiens GCA_018503585.1_HG02818.pri.mat.f1_v2 SAMN05603745 PRJNA727347 2021-05-26
90 human (HG02818.pat 2021) Homo sapiens GCA_018503575.1_HG02818.alt.pat.f1_v2 SAMN05603745 PRJNA727346 2021-05-26
91 human (HG02886.mat 2021) Homo sapiens GCA_018470455.1_HG02886.pri.mat.f1_v2 SAMN17861667 PRJNA725861 2021-05-24
92 human (HG02886.pat 2021) Homo sapiens GCA_018470465.1_HG02886.alt.pat.f1_v2 SAMN17861667 PRJNA725860 2021-05-24
93 human (HG03098.pat 2021) Homo sapiens GCA_018506155.1_HG03098.alt.pat.f1_v2 SAMN13957944 PRJNA727423 2021-05-26
94 human (HG03098.mat 2021) Homo sapiens GCA_018506165.1_HG03098.pri.mat.f1_v2 SAMN13957944 PRJNA727424 2021-05-26
95 human (HG03453.mat 2021) Homo sapiens GCA_018472855.1_HG03453.pri.mat.f1_v2 SAMN17861668 PRJNA726180 2021-05-24
96 human (HG03453.pat 2021) Homo sapiens GCA_018473305.1_HG03453.alt.pat.f1_v2 SAMN17861668 PRJNA726179 2021-05-24
97 human (HG03486.mat 2021) Homo sapiens GCA_018503525.1_HG03486.pri.mat.f1_v2 SAMN08723473 PRJNA727345 2021-05-26
98 human (HG03486.pat 2021) Homo sapiens GCA_018503245.1_HG03486.alt.pat.f1_v2 SAMN08723473 PRJNA727344 2021-05-26
99 human (HG03492.mat 2021) Homo sapiens GCA_018505845.1_HG03492.pri.mat.f1_v2 SAMN13958363 PRJNA727420 2021-05-26
100 human (HG03492.pat 2021) Homo sapiens GCA_018505835.1_HG03492.alt.pat.f1_v2 SAMN13958363 PRJNA727419 2021-05-26
101 human (HG03516.mat 2021) Homo sapiens GCA_018469425.1_HG03516.pri.mat.f1_v2 SAMN17861241 PRJNA725604 2021-05-24
102 human (HG03516.pat 2021) Homo sapiens GCA_018469415.1_HG03516.alt.pat.f1_v2 SAMN17861241 PRJNA725603 2021-05-24
103 human (HG03540.mat 2021) Homo sapiens GCA_018473295.1_HG03540.pri.mat.f1_v2 SAMN17861670 PRJNA726182 2021-05-24
104 human (HG03540.pat 2021) Homo sapiens GCA_018473315.1_HG03540.alt.pat.f1_v2 SAMN17861670 PRJNA726181 2021-05-24
105 human (HG03579.mat 2021) Homo sapiens GCA_018472825.1_HG03579.pri.mat.f1_v2 SAMN17861671 PRJNA726178 2021-05-24
106 human (HG03579.pat 2021) Homo sapiens GCA_018472835.1_HG03579.alt.pat.f1_v2 SAMN17861671 PRJNA726177 2021-05-24
107 human (NA24385.mat 2022) Homo sapiens GCA_021951015.1_HG002.mat.cur.20211005 SAMN03283347 PRJNA794175 2022-02-04
108 human (NA24385.pat 2022) Homo sapiens GCA_021950905.1_HG002.pat.cur.20211005 SAMN03283347 PRJNA794172 2022-02-04
109 human (NA24385.mat 2021) Homo sapiens GCA_018852615.1_HG002.pri.mat.f1_v2 SAMN03283347 PRJNA727431 2021-06-11
110 human (NA24385.pat 2021) Homo sapiens GCA_018852605.1_HG002.alt.pat.f1_v2 SAMN03283347 PRJNA727430 2021-06-11
111 human (NA24631.mat 2021) Homo sapiens GCA_018506965.1_HG005.pri.mat.f1_v2 SAMN03283350 PRJNA727429 2021-05-26
112 human (NA24631.pat 2021) Homo sapiens GCA_018506945.1_HG005.alt.pat.f1_v2 SAMN03283350 PRJNA727428 2021-05-26
113 human (NA18906.mat 2021) Homo sapiens GCA_018503255.1_NA18906.pri.mat.f1_v2 SAMN13957875 PRJNA727343 2021-05-26
114 human (NA18906.pat 2021) Homo sapiens GCA_018503285.1_NA18906.alt.pat.f1_v2 SAMN13957875 PRJNA727342 2021-05-26
115 human (NA19240.mat 2021) Homo sapiens GCA_018503275.1_NA19240.pri.mat.f1_v2 SAMN03838746 PRJNA727341 2021-05-26
116 human (NA19240.pat 2021) Homo sapiens GCA_018503265.1_NA19240.alt.pat.f1_v2 SAMN03838746 PRJNA727340 2021-05-26
117 human (NA20129.mat 2021) Homo sapiens GCA_018504635.1_NA20129.pri.mat.f1_v2 SAMN13207712 PRJNA727367 2021-05-26
118 human (NA20129.pat 2021) Homo sapiens GCA_018504625.1_NA20129.alt.pat.f1_v2 SAMN13207712 PRJNA727366 2021-05-26
119 human (NA21309.mat 2021) Homo sapiens GCA_018504655.1_NA21309.pri.mat.f1_v2 SAMN11308573 PRJNA727365 2021-05-26
120 human (NA21309.pat 2021) Homo sapiens GCA_018504665.1_NA21309.alt.pat.f1_v2 SAMN11308573 PRJNA727364 2021-05-26
121 human (WGS:JACSEW01 2021 alternate hap) Homo sapiens GCA_016700455.2_mHomSap3.pat SAMN12568975 PRJNA562022 2021-01-19
122 human (mHomSap3 WGS:JACSEX01 2021) Homo sapiens GCA_016695395.2_mHomSap3.mat SAMN12568975 PRJNA562023 2021-01-19
123 lesser dwarf lemur Cheirogaleus medius GCA_004024725.1_CheMed_v1_BIUU SAMN07678072 PRJNA399382 2019-01-15
124 Ma's night monkey Aotus nancymaae GCF_000952055.2_Anan_2.0 SAMN03121886 PRJNA251539 2017-06-09
125 mantled howler monkey Alouatta palliata GCA_004027835.1_AloPal_v1_BIUU SAMN07678036 PRJNA399372 2019-01-16
126 northern white-cheeked gibbon (2019 U. Washington) Nomascus leucogenys GCF_006542625.1_Asia_NLE_v1 SAMN11124083 PRJNA369439 2019-07-02
127 olive baboon (2019 UCSF) Papio anubis GCF_008728515.1_Panubis1.0 SAMN11179045 PRJNA527874 2019-10-02
128 Panamanian white-faced capuchin Cebus imitator GCF_001604975.1_Cebus_imitator-1.0 SAMN04522148 PRJNA298580 2016-04-04
129 Pere David's macaque Macaca thibetana thibetana GCF_024542745.1_ASM2454274v1 SAMN27068423 PRJNA821381 2022-08-09
130 Philippine tarsier Carlito syrichta GCF_000164805.1_Tarsius_syrichta-2.0.1 SAMN02445010 PRJNA20339 2013-09-18
131 pig-tailed macaque Macaca nemestrina GCF_000956065.1_Mnem_1.0 SAMN03121842 PRJNA251427 2015-03-19
132 proboscis monkey Nasalis larvatus GCA_004027105.1_NasLar_v1_BIUU SAMN07678099 PRJNA399408 2019-01-16
133 pygmy chimpanzee (Ulindi refseq 2015) Pan paniscus GCF_000258655.2_panpan1.1 SAMEA1029457 PRJNA49285 2015-08-18
134 pygmy chimpanzee (Mhudiblu Carbone 601152 2020) Pan paniscus GCF_013052645.1_Mhudiblu_PPA_v0 SAMN11123633 PRJNA526933 2020-05-15
135 pygmy chimpanzee (NHGRI 2023) Pan paniscus GCF_029289425.1_NHGRI_mPanPan1-v1.1-0.1.freeze_pri SAMN13935689 PRJNA942951 2023-03-20
136 red guenon Erythrocebus patas GCA_004027335.1_EryPat_v1_BIUU SAMN07678082 PRJNA399392 2019-01-16
137 red shanked douc langur Pygathrix nemaeus GCA_004024825.1_PygNem_v1_BIUU SAMN07678108 PRJNA399415 2019-01-15
138 Rhesus monkey (2019 U. Washington) Macaca mulatta GCF_003339765.1_Mmul_10 SAMN09435472 PRJNA476474 2019-02-13
139 ring-tailed lemur (2021) Lemur catta GCF_020740605.2_mLemCat1.pri SAMN12621102 PRJNA561949 2021-11-04
140 siamang (Jambi primary hap 2023) Symphalangus syndactylus GCF_028878055.1_NHGRI_mSymSyn1-v1.1-hic.freeze_pri SAMN30216103 PRJNA916729 2023-02-28
141 Sclater's lemur (Harlow 2015) Eulemur flavifrons GCA_001262665.1_Eflavifronsk33QCA SAMN03699688 PRJNA284191 2015-08-06
142 silvery gibbon (HMO894 2020 UC Santa Cruz) Hylobates moloch GCF_009828535.2_HMol_V2 SAMN12851060 PRJNA575281 2020-02-13
143 slow loris (mNycCou1 primary hap 2022) Nycticebus coucang GCF_027406575.1_mNycCou1.pri SAMN28408555 PRJNA838348 2022-12-28
144 small-eared galago Otolemur garnettii GCF_000181295.1_OtoGar3 SAMN02981229 PRJNA16955 2011-03-16
145 sooty mangabey Cercocebus atys GCF_000955945.1_Caty_1.0 SAMN03379531 PRJNA157077 2015-03-19
146 Sumatran orangutan (AG06213 primary hap 2023) Pongo abelii GCF_028885655.1_NHGRI_mPonAbe1-v1.1-hic.freeze_pri SAMN10521808 PRJNA916743 2023-02-28
147 Sumatran orangutan (Susie 2018 refseq) Pongo abelii GCF_002880775.1_Susie_PABv2 SAMN06275555 PRJNA369439 2018-01-19
148 tamarin Saguinus imperator GCA_004024885.1_SagImp_v1_BIUU SAMN07678110 PRJNA399417 2019-01-15
149 tufted capuchin Sapajus apella GCF_009761245.1_GSC_monkey_1.0 SAMN13265339 PRJNA588076 2019-12-17
150 Ugandan red Colobus (RC106 v5 2019) Piliocolobus tephrosceles GCF_002776525.5_ASM277652v5 SAMN07735529 PRJNA413051 2019-12-12
151 western lowland gorilla (Kamilah 2019) Gorilla gorilla gorilla GCF_008122165.1_Kamilah_GGO_v0 SAMN11078986 PRJNA369439 2019-08-28
152 western lowland gorilla (KB3781 2023) Gorilla gorilla gorilla GCF_029281585.1_NHGRI_mGorGor1-v1.1-0.2.freeze_pri SAMN04003007 PRJNA942267 2023-03-20
153 white-faced saki Pithecia pithecia GCA_004026645.1_PitPit_v1_BIUU SAMN07678106 PRJNA399413 2019-01-16
154 white-fronted capuchin Cebus albifrons GCA_004027755.1_CebAlb_v1_BIUU SAMN07678068 PRJNA399379 2019-01-16
155 white-tufted-ear marmoset (cj1700 2020) Callithrix jacchus GCF_009663435.1_Callithrix_jacchus_cj1700_1.1 n/a PRJNA566173 2020-05-22
156 white-tufted-ear marmoset (maternal 2020) Callithrix jacchus GCA_011078405.1_mCalJac1.mat SAMN12368443 PRJNA558086 2020-03-10
157 white-tufted-ear marmoset (paternal 2020) Callithrix jacchus GCA_011100535.1_mCalJac1.pat SAMN12368443 PRJNA558087 2020-03-10
158 white-tufted-ear marmoset (paternal X 2020) Callithrix jacchus GCA_011100555.1_mCalJac1.pat.X SAMN12368443 PRJNA597600 2020-03-10
159 white-tufted-ear marmoset (mCalJac1 2021) Callithrix jacchus GCF_011100555.1_mCalJa1.2.pat.X SAMN12368443 PRJNA597600 2021-04-28

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 159 assemblies assembly stats track stats
Mammals 407 assemblies assembly stats track stats
Birds 270 assemblies assembly stats track stats
Fishes 269 assemblies assembly stats track stats
other vertebrates 113 assemblies assembly stats track stats
Invertebrates 533 assemblies assembly stats track stats
Plants 229 assemblies assembly stats track stats
Fungi 544 assemblies assembly stats track stats
Viruses 259 assemblies assembly stats track stats
Bacteria 64 assemblies assembly stats track stats
legacy/superseded 321 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 445 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 96 assemblies assembly stats track stats