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Assemblies from NCBI/Genbank/Refseq sources, subset of legacy only.
count | common name link to genome browser |
ncbiRefSeq | xenoRefGene | augustus genes |
Ensembl genes |
gc5 base | gaps | assembly sequences |
Repeat Masker |
TRF simpleRepeat |
window Masker |
cpg islands |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aardvark (BS58 2019 Broad) GCA_004365145.1 |
n/a | 22,095 (0.63 %) |
44,942 (0.68 %) |
n/a | 40.25 (99.86 %) |
15,429 (0.03 %) |
2,690,873 (99.97 %) |
8,755,250 (34.47 %) |
869,360 (1.26 %) |
22,002,517 (59.65 %) |
39,239 (0.49 %) |
2 | African clawed frog (2016) GCF_001663975.1 |
61,172 (41.31 %) |
23,407 (1.77 %) |
47,466 (1.76 %) |
n/a | 38.98 (88.63 %) |
216,028 (11.39 %) |
324,061 (88.61 %) |
3,739,339 (33.13 %) |
680,419 (2.28 %) |
13,887,586 (35.94 %) |
85,680 (0.94 %) |
3 | African savanna elephant (2009 genbank) GCA_000001905.1 |
n/a | 19,181 (1.25 %) |
19,665 (1.10 %) |
n/a | 40.76 (97.57 %) |
93,514 (2.45 %) |
95,866 (97.55 %) |
6,337,637 (57.82 %) |
365,796 (0.88 %) |
16,073,052 (44.89 %) |
33,513 (0.68 %) |
4 | alpaca (2015 BGI) GCA_000767525.1 |
n/a | 18,513 (1.97 %) |
19,112 (1.70 %) |
n/a | 41.46 (99.38 %) |
23,458 (0.62 %) |
75,733 (99.38 %) |
3,095,742 (36.41 %) |
314,508 (1.07 %) |
12,365,152 (25.46 %) |
53,956 (1.50 %) |
5 | alpaca (v3.1 Carlotta AHFN-0088 2019 Deakin U) GCF_000164845.3 |
55,014 (3.56 %) |
18,451 (1.93 %) |
18,474 (1.64 %) |
n/a | 41.40 (95.85 %) |
166,280 (4.17 %) |
77,390 (100.00 %) |
3,071,384 (35.75 %) |
315,108 (1.36 %) |
12,461,739 (24.88 %) |
54,502 (1.38 %) |
6 | American beaver (US014 2019 Broad) GCA_004027675.1 |
n/a | 22,515 (1.25 %) |
34,527 (1.17 %) |
n/a | 39.58 (99.92 %) |
5,769 (0.02 %) |
837,916 (99.98 %) |
5,101,904 (34.46 %) |
552,100 (1.02 %) |
15,150,706 (34.57 %) |
24,558 (0.63 %) |
7 | American bison (2014 genbank) GCA_000754665.1 |
n/a | 20,215 (1.44 %) |
20,845 (1.20 %) |
n/a | 41.99 (93.39 %) |
341,984 (6.63 %) |
792,165 (93.37 %) |
6,006,931 (47.67 %) |
495,106 (1.11 %) |
13,902,115 (39.01 %) |
90,767 (1.29 %) |
8 | American pika 3.0 (2012 Broad genbank) GCA_000292845.1 |
n/a | 17,569 (1.60 %) |
20,092 (1.69 %) |
n/a | 43.35 (87.20 %) |
122,542 (12.82 %) |
132,961 (87.18 %) |
2,829,934 (29.80 %) |
414,895 (1.07 %) |
10,968,663 (26.71 %) |
44,651 (1.14 %) |
9 | Amur tiger (TaeGuk 2013 genbank) GCA_000464555.1 |
n/a | 18,213 (1.58 %) |
15,093 (1.29 %) |
n/a | 41.40 (97.59 %) |
155,553 (2.44 %) |
157,031 (97.56 %) |
4,832,679 (42.49 %) |
831,134 (1.67 %) |
13,654,373 (31.78 %) |
65,229 (1.60 %) |
10 | Arabian camel (2014 genbank) GCA_000767585.1 |
n/a | 18,452 (1.96 %) |
16,975 (1.61 %) |
n/a | 41.29 (98.88 %) |
72,775 (1.13 %) |
105,347 (98.87 %) |
3,079,920 (34.79 %) |
319,928 (0.96 %) |
12,281,845 (25.28 %) |
48,638 (1.17 %) |
11 | Arctic fox (US066 2019 Broad) GCA_004023825.1 |
n/a | 22,910 (1.42 %) |
31,985 (1.20 %) |
n/a | 41.93 (99.87 %) |
9,604 (0.04 %) |
1,272,949 (99.96 %) |
6,096,013 (44.89 %) |
1,265,350 (2.67 %) |
14,617,986 (39.29 %) |
64,716 (1.93 %) |
12 | ass (Maral har 2015 genbank) GCA_001305755.1 |
n/a | 18,884 (1.76 %) |
19,296 (1.44 %) |
n/a | 41.28 (98.63 %) |
69,593 (1.38 %) |
2,166 (100.00 %) |
3,855,699 (41.69 %) |
289,735 (0.96 %) |
14,695,257 (28.58 %) |
40,025 (1.06 %) |
13 | Atlantic herring (v1) GCF_900700415.1 |
46,216 (9.88 %) |
15,254 (2.65 %) |
55,365 (7.12 %) |
67,663 (8.92 %) |
44.24 (99.88 %) |
1,963 (0.12 %) |
1,990 (99.88 %) |
1,192,612 (11.90 %) |
1,231,613 (13.39 %) |
3,511,276 (32.20 %) |
33,465 (1.97 %) |
14 | B.malayi (v3 2008 agent of lymphatic filariasis) GCF_000002995.3 |
11,472 (14.88 %) |
2,843 (2.29 %) |
3,797 (4.95 %) |
n/a | 30.21 (92.98 %) |
58,744 (7.04 %) |
26,881 (93.03 %) |
147,614 (11.55 %) |
54,885 (7.91 %) |
647,155 (33.62 %) |
509 (0.15 %) |
15 | Bactrian camel (Alxa 2014 genbank) GCA_000767855.1 |
n/a | 18,330 (1.96 %) |
17,094 (1.64 %) |
n/a | 41.32 (99.32 %) |
31,980 (0.69 %) |
67,434 (99.31 %) |
3,072,373 (34.88 %) |
306,996 (0.95 %) |
12,209,895 (25.43 %) |
49,789 (1.25 %) |
16 | barn owl BGI_N341 (2014) GCF_000687205.1 |
15,006 (2.07 %) |
11,130 (1.43 %) |
23,939 (1.67 %) |
n/a | 40.21 (99.24 %) |
109,223 (0.79 %) |
171,345 (99.21 %) |
495,502 (5.00 %) |
181,353 (0.91 %) |
6,776,326 (18.43 %) |
10,575 (0.29 %) |
17 | barn owl (2020) GCF_902150015.1 |
37,361 (4.54 %) |
12,958 (1.72 %) |
22,922 (1.99 %) |
n/a | 41.55 (99.23 %) |
177,340 (0.79 %) |
21,504 (100.00 %) |
585,627 (5.48 %) |
367,764 (2.44 %) |
7,399,161 (19.58 %) |
47,061 (3.25 %) |
18 | black-legged tick (U.Maryland v1 2021) GCF_016920785.1 |
41,018 (2.61 %) |
4,064 (0.14 %) |
135,587 (7.67 %) |
n/a | 46.27 (100.00 %) |
n/a | 2,977 (100.00 %) |
1,153,773 (4.93 %) |
754,711 (7.52 %) |
10,964,182 (43.13 %) |
138,831 (8.38 %) |
19 | black snub-nosed monkey genbank GCA_001698545.1 |
n/a | 21,244 (1.88 %) |
23,681 (1.25 %) |
n/a | 40.94 (94.13 %) |
149,843 (5.88 %) |
105,030 (100.00 %) |
5,600,915 (50.57 %) |
991,762 (2.45 %) |
16,353,992 (34.26 %) |
81,205 (1.19 %) |
20 | Bolivian squirrel monkey (2011) GCF_000235385.1 |
39,820 (2.33 %) |
20,222 (2.04 %) |
18,404 (1.34 %) |
49,071 (2.26 %) |
40.77 (94.98 %) |
148,728 (5.04 %) |
151,414 (94.96 %) |
4,710,420 (46.30 %) |
767,602 (1.48 %) |
14,489,703 (32.96 %) |
32,474 (0.75 %) |
21 | brown bear (GAN/ISIS:MIG12 v1 2018) GCF_003584765.1 |
54,006 (3.19 %) |
18,821 (1.77 %) |
21,060 (1.52 %) |
n/a | 41.84 (99.31 %) |
17,380 (0.70 %) |
21,814 (99.30 %) |
4,201,047 (40.86 %) |
567,588 (1.23 %) |
13,807,277 (30.86 %) |
62,126 (1.80 %) |
22 | California sea lion (BS06 2019 Broad) GCA_004024565.1 |
n/a | 23,668 (1.61 %) |
29,709 (1.32 %) |
n/a | 41.56 (99.92 %) |
10,276 (0.04 %) |
582,272 (99.96 %) |
4,952,087 (44.00 %) |
651,744 (1.26 %) |
13,644,805 (35.79 %) |
62,245 (1.50 %) |
23 | Cape golden mole (BS56 2019 Broad) GCA_004027935.1 |
n/a | 25,543 (0.55 %) |
52,506 (0.63 %) |
n/a | 40.04 (99.84 %) |
4,876 (0.01 %) |
3,432,954 (99.99 %) |
7,363,240 (21.82 %) |
876,677 (2.53 %) |
25,446,677 (58.18 %) |
25,319 (0.31 %) |
24 | cassava (v6 AM560-2 2016 DOE) GCF_001659605.1 |
48,199 (10.95 %) |
18,537 (3.62 %) |
45,536 (13.17 %) |
n/a | 35.94 (85.14 %) |
37,896 (14.88 %) |
39,916 (85.12 %) |
295,656 (2.88 %) |
266,527 (3.40 %) |
2,434,269 (42.34 %) |
30,963 (1.41 %) |
25 | cattle (Hereford 2015) GCA_000003205.6 |
n/a | 19,803 (1.54 %) |
21,001 (1.30 %) |
n/a | 41.83 (99.57 %) |
41,517 (0.44 %) |
42,578 (99.56 %) |
5,725,274 (49.24 %) |
459,535 (1.33 %) |
12,905,109 (41.11 %) |
43,324 (1.28 %) |
26 | cheetah (AJU 981 2015) GCA_001443585.1 |
n/a | 18,264 (1.57 %) |
14,665 (1.26 %) |
n/a | 41.30 (98.26 %) |
183,260 (1.77 %) |
14,382 (100.00 %) |
4,777,041 (42.51 %) |
784,368 (1.53 %) |
13,503,827 (31.65 %) |
57,657 (1.31 %) |
27 | chimpanzee genbank GCA_002880755.3 |
n/a | 20,378 (1.83 %) |
21,427 (1.19 %) |
n/a | 40.71 (98.98 %) |
693 (1.02 %) |
5,037 (98.98 %) |
5,409,980 (53.76 %) |
984,231 (7.31 %) |
15,896,744 (39.56 %) |
45,870 (0.97 %) |
28 | China rose (Old Blush v1 2018) GCF_002994745.1 |
60,293 (11.65 %) |
15,433 (2.84 %) |
67,310 (21.70 %) |
n/a | 38.83 (100.00 %) |
33 (0.00 %) |
45 (100.00 %) |
273,992 (2.25 %) |
228,466 (3.97 %) |
2,261,888 (35.14 %) |
37,317 (4.18 %) |
29 | Chinese hamster (17A/GY CHO 2018) GCF_003668045.1 |
55,529 (3.00 %) |
20,195 (1.84 %) |
20,021 (1.50 %) |
46,526 (2.01 %) |
41.51 (99.88 %) |
4,356 (0.12 %) |
1,830 (100.00 %) |
4,431,956 (32.72 %) |
1,095,407 (2.92 %) |
12,942,232 (32.27 %) |
19,343 (0.58 %) |
30 | Chinese pangolin (MPE899 2014 WashU) GCA_000738955.1 |
n/a | 18,749 (1.63 %) |
22,506 (1.40 %) |
n/a | 40.93 (90.69 %) |
257,424 (9.33 %) |
230,927 (90.67 %) |
2,691,116 (34.48 %) |
316,518 (1.96 %) |
11,538,086 (25.40 %) |
30,693 (0.58 %) |
31 | common bottlenose dolphin (MMES2002162SC 2016 genbank) GCA_001922835.1 |
n/a | 17,254 (1.68 %) |
17,112 (1.34 %) |
n/a | 40.85 (99.45 %) |
114,003 (0.57 %) |
2,647 (100.00 %) |
3,845,214 (43.88 %) |
514,631 (1.06 %) |
12,317,013 (32.18 %) |
48,030 (1.35 %) |
32 | common carp (2014) GCF_000951615.1 |
75,427 (5.81 %) |
27,639 (2.17 %) |
100,641 (5.02 %) |
106,504 (5.94 %) |
37.00 (97.48 %) |
57,940 (2.53 %) |
9,378 (100.00 %) |
1,476,046 (5.19 %) |
987,356 (7.88 %) |
9,900,821 (37.41 %) |
48,702 (1.38 %) |
33 | common cuckoo (BGI 2014) GCF_000709325.1 |
16,827 (2.53 %) |
12,605 (1.80 %) |
21,017 (2.12 %) |
n/a | 41.52 (97.64 %) |
56,977 (2.38 %) |
71,907 (97.62 %) |
484,145 (8.81 %) |
192,437 (2.08 %) |
6,576,259 (19.85 %) |
18,002 (0.74 %) |
34 | common house spider (v2 2017) GCF_000365465.2 |
30,064 (3.79 %) |
3,347 (0.23 %) |
7,571 (1.48 %) |
n/a | 29.46 (81.63 %) |
247,378 (18.44 %) |
263,908 (81.56 %) |
587,943 (2.23 %) |
464,643 (2.90 %) |
10,795,253 (40.31 %) |
10,480 (0.23 %) |
35 | common vampire bat (DRU21DN04 2018 genbank) GCA_002940915.2 |
n/a | 18,511 (1.87 %) |
18,170 (1.68 %) |
n/a | 42.15 (97.78 %) |
54,308 (2.23 %) |
84,108 (97.77 %) |
2,860,991 (29.93 %) |
275,245 (1.03 %) |
11,798,152 (28.19 %) |
51,833 (1.38 %) |
36 | Coquerel's sifaka 6110/Marcella (2015 genbank) GCA_000956105.1 |
n/a | 19,335 (2.10 %) |
21,769 (1.63 %) |
n/a | 41.24 (74.51 %) |
276,544 (25.53 %) |
299,069 (74.47 %) |
3,513,698 (39.82 %) |
304,033 (0.59 %) |
13,333,842 (21.06 %) |
56,694 (1.59 %) |
37 | crab-eating macaque WashU 2013 genbank GCA_000364345.1 |
n/a | 20,283 (1.90 %) |
20,544 (1.22 %) |
n/a | 40.90 (95.16 %) |
80,474 (4.85 %) |
87,763 (95.15 %) |
5,351,207 (51.35 %) |
941,514 (3.24 %) |
15,778,449 (35.74 %) |
76,963 (1.14 %) |
38 | crab-eating macaque WashU 2013 refseq GCF_000364345.1 |
76,196 (3.30 %) |
20,279 (1.90 %) |
53,364 (7.19 %) |
54,367 (2.24 %) |
40.90 (95.16 %) |
80,474 (4.85 %) |
87,764 (95.15 %) |
5,274,951 (51.20 %) |
941,514 (3.24 %) |
15,778,510 (35.74 %) |
76,963 (1.14 %) |
39 | degu (3935 2012 genbank) GCA_000260255.1 |
n/a | 22,240 (1.40 %) |
22,108 (1.46 %) |
n/a | 41.38 (84.36 %) |
252,770 (15.68 %) |
259,903 (84.32 %) |
4,890,270 (27.82 %) |
898,943 (1.50 %) |
14,281,942 (29.30 %) |
40,135 (0.82 %) |
40 | dog (BS72 2019 Broad) GCA_004027395.1 |
n/a | 22,343 (1.53 %) |
28,525 (1.27 %) |
n/a | 41.66 (99.91 %) |
10,428 (0.04 %) |
667,170 (99.96 %) |
5,598,608 (45.38 %) |
1,220,686 (2.58 %) |
14,079,363 (36.37 %) |
62,881 (2.13 %) |
41 | domestic ferret (Sable ID 1420 FGSC 2011) GCF_000215625.1 |
55,980 (3.39 %) |
18,624 (1.69 %) |
19,480 (1.48 %) |
33,567 (2.63 %) |
41.47 (94.51 %) |
109,700 (5.51 %) |
117,442 (94.49 %) |
4,309,890 (39.11 %) |
606,818 (1.04 %) |
13,503,550 (29.63 %) |
53,375 (1.90 %) |
42 | domestic guinea pig (2N 2008 genbank) GCA_000151735.1 |
n/a | 18,297 (1.33 %) |
20,107 (1.34 %) |
n/a | 39.95 (97.81 %) |
58,460 (2.20 %) |
61,603 (97.80 %) |
4,257,412 (38.85 %) |
658,532 (1.25 %) |
14,547,631 (34.19 %) |
37,092 (0.85 %) |
43 | downy woodpecker (BGI 2014) GCF_000699005.1 |
15,850 (2.33 %) |
11,863 (1.67 %) |
19,887 (1.96 %) |
n/a | 44.51 (96.31 %) |
96,471 (3.72 %) |
127,725 (96.28 %) |
985,101 (19.79 %) |
310,018 (2.09 %) |
5,822,687 (27.83 %) |
17,379 (0.69 %) |
44 | Egyptian rousette (US006 2019 Broad) GCA_004024865.1 |
n/a | 20,133 (1.87 %) |
36,361 (1.80 %) |
n/a | 40.23 (99.96 %) |
4,332 (0.02 %) |
226,086 (99.98 %) |
2,985,622 (32.66 %) |
475,311 (1.11 %) |
12,612,081 (27.34 %) |
81,930 (5.75 %) |
45 | elephant shark (2013) GCF_000165045.1 |
30,695 (52.05 %) |
11,646 (1.60 %) |
28,786 (2.60 %) |
49,990 (4.61 %) |
42.34 (96.16 %) |
46,232 (3.85 %) |
67,421 (96.15 %) |
1,926,864 (38.18 %) |
330,698 (2.60 %) |
5,549,534 (36.65 %) |
35,561 (2.16 %) |
46 | Eurasian water vole (v1 2020) GCF_903992535.1 |
45,658 (2.52 %) |
19,724 (1.77 %) |
19,069 (1.47 %) |
n/a | 42.15 (99.74 %) |
872 (0.26 %) |
216 (100.00 %) |
4,098,151 (26.75 %) |
1,088,237 (2.91 %) |
12,853,776 (32.42 %) |
19,000 (0.58 %) |
47 | Florida manatee (Lorelei 2012 genbank) GCA_000243295.1 |
n/a | 18,302 (1.36 %) |
20,592 (1.23 %) |
n/a | 40.73 (89.24 %) |
160,167 (10.78 %) |
166,489 (89.22 %) |
5,109,822 (37.03 %) |
389,314 (0.74 %) |
14,633,007 (38.46 %) |
27,461 (0.64 %) |
48 | fly D.yakuba (2018) GCF_000005975.2 |
5,444 (4.10 %) |
13,713 (15.95 %) |
22,613 (16.71 %) |
n/a | 42.28 (98.12 %) |
5,400 (1.88 %) |
13,440 (98.12 %) |
180,908 (22.48 %) |
68,911 (3.75 %) |
897,353 (23.94 %) |
31,387 (14.91 %) |
49 | fly D.yakuba (v1 2021) GCF_016746365.1 |
27,938 (24.60 %) |
13,343 (17.86 %) |
20,029 (17.64 %) |
n/a | 42.55 (100.00 %) |
11 (0.00 %) |
54 (100.00 %) |
169,559 (23.47 %) |
60,591 (3.64 %) |
837,616 (23.40 %) |
28,204 (16.22 %) |
50 | giant panda GCF_000004335.2 |
40,432 (2.55 %) |
18,906 (1.75 %) |
18,924 (1.46 %) |
n/a | 41.60 (97.66 %) |
119,126 (2.36 %) |
200,593 (97.64 %) |
4,143,948 (40.06 %) |
503,179 (1.10 %) |
13,781,487 (28.85 %) |
53,461 (1.34 %) |
51 | goat (San Clemente 2016 USDA genbank) GCA_001704415.1 |
n/a | 19,842 (1.43 %) |
22,426 (1.24 %) |
n/a | 43.16 (100.00 %) |
790 (0.00 %) |
29,906 (100.00 %) |
5,669,868 (50.59 %) |
760,836 (7.07 %) |
13,024,386 (44.85 %) |
125,682 (4.01 %) |
52 | golden hamster (Baylor 2013 genbank) GCA_000349665.1 |
n/a | 18,965 (1.82 %) |
19,339 (1.52 %) |
n/a | 42.01 (82.92 %) |
216,216 (17.12 %) |
237,699 (82.88 %) |
3,724,142 (27.19 %) |
790,256 (1.69 %) |
12,003,866 (24.29 %) |
18,591 (0.51 %) |
53 | golden snub-nosed monkey (2014 Novogene) GCA_000769185.1 |
n/a | 21,341 (1.86 %) |
22,492 (1.24 %) |
n/a | 40.87 (98.50 %) |
61,291 (1.50 %) |
196,804 (98.50 %) |
5,673,299 (51.36 %) |
1,080,627 (3.06 %) |
16,205,827 (36.77 %) |
79,387 (1.14 %) |
54 | gray mouse lemur genbank GCA_000165445.3 |
n/a | 20,031 (1.89 %) |
22,619 (1.50 %) |
n/a | 40.98 (95.94 %) |
43,363 (4.06 %) |
50,982 (95.94 %) |
4,082,873 (41.60 %) |
582,430 (1.47 %) |
14,808,558 (30.05 %) |
74,772 (2.61 %) |
55 | great roundleaf bat (ML-2016 2016 genbank) GCA_001890085.1 |
n/a | 19,011 (2.00 %) |
19,882 (1.66 %) |
n/a | 41.11 (87.42 %) |
172,751 (12.60 %) |
7,570 (100.00 %) |
3,078,210 (32.07 %) |
495,290 (1.05 %) |
11,588,202 (25.43 %) |
33,101 (0.97 %) |
56 | greater mouse-eared bat (2019 Broad) GCA_004026985.1 |
n/a | 23,153 (1.31 %) |
51,642 (1.43 %) |
n/a | 43.16 (99.88 %) |
8,133 (0.04 %) |
1,053,330 (99.96 %) |
3,675,075 (25.48 %) |
938,700 (2.73 %) |
12,027,923 (39.01 %) |
80,955 (2.31 %) |
57 | green algae C.reinhardtii CC-503 cw92 (v1 2007) GCF_000002595.1 |
14,484 (22.24 %) |
987 (0.55 %) |
11,299 (59.37 %) |
n/a | 63.87 (87.58 %) |
10,425 (12.45 %) |
11,385 (87.55 %) |
167,652 (16.23 %) |
100,391 (4.60 %) |
734,057 (30.38 %) |
3,154 (63.45 %) |
58 | green monkey 1994-021 (2014 genbank) GCA_000409795.2 |
n/a | 20,079 (1.94 %) |
20,246 (1.25 %) |
n/a | 40.81 (98.67 %) |
178,925 (1.35 %) |
163,017 (98.65 %) |
5,382,039 (50.20 %) |
980,479 (2.63 %) |
16,076,172 (35.62 %) |
50,033 (1.04 %) |
59 | green sea turtle (BGI 2013) GCF_000344595.1 |
31,786 (42.84 %) |
14,569 (1.02 %) |
77,496 (2.26 %) |
n/a | 43.49 (95.57 %) |
134,344 (4.44 %) |
274,367 (95.56 %) |
1,713,239 (14.26 %) |
317,642 (2.08 %) |
11,732,990 (28.32 %) |
36,782 (0.70 %) |
60 | green sea turtle (v1 2020) GCF_015237465.1 |
56,917 (3.63 %) |
14,729 (1.06 %) |
17,439 (1.56 %) |
n/a | 44.01 (99.44 %) |
294 (0.56 %) |
99 (100.00 %) |
1,641,730 (15.08 %) |
304,356 (1.25 %) |
11,136,918 (31.96 %) |
49,035 (1.44 %) |
61 | Hawaiian monk seal (2017 Johns Hopkins U) GCF_002201575.1 |
29,897 (1.95 %) |
19,404 (1.74 %) |
20,264 (1.41 %) |
n/a | 41.41 (97.77 %) |
38,833 (2.24 %) |
7,872 (100.00 %) |
4,547,865 (43.29 %) |
573,335 (1.09 %) |
13,374,928 (33.10 %) |
50,380 (1.45 %) |
62 | hooded crow (2017) GCF_000738735.2 |
35,874 (6.47 %) |
11,298 (1.84 %) |
17,627 (2.12 %) |
n/a | 41.48 (97.07 %) |
27,795 (2.94 %) |
113 (100.00 %) |
392,199 (5.95 %) |
139,126 (0.76 %) |
6,141,002 (18.21 %) |
12,943 (0.48 %) |
63 | horse (Twilight 2007 genbank) GCA_000002305.1 |
n/a | 18,575 (1.67 %) |
17,121 (1.34 %) |
n/a | 41.50 (98.14 %) |
45,680 (1.86 %) |
55,316 (98.14 %) |
3,941,878 (45.17 %) |
381,229 (1.99 %) |
14,674,265 (29.80 %) |
45,521 (1.52 %) |
64 | house mouse GCF_000001635.26 |
124,364 (4.53 %) |
23,962 (2.07 %) |
23,974 (1.75 %) |
n/a | 41.73 (97.18 %) |
904 (2.82 %) |
21,179 (97.18 %) |
5,418,774 (44.61 %) |
1,695,255 (3.40 %) |
13,041,229 (35.91 %) |
25,014 (0.54 %) |
65 | Indian medaka GCF_002922805.1 |
47,300 (9.26 %) |
14,575 (2.49 %) |
52,989 (6.38 %) |
36,821 (8.90 %) |
39.04 (94.73 %) |
51,440 (5.29 %) |
8,603 (100.00 %) |
321,738 (2.19 %) |
208,749 (2.67 %) |
5,412,794 (33.26 %) |
40,721 (2.36 %) |
66 | Jamaican fruit-eating bat (US092 2019 Broad) GCA_004027435.1 |
n/a | 21,188 (1.26 %) |
41,550 (1.34 %) |
n/a | 42.19 (99.92 %) |
4,324 (0.02 %) |
798,700 (99.98 %) |
3,297,388 (28.66 %) |
476,792 (1.23 %) |
13,144,912 (34.13 %) |
81,685 (1.86 %) |
67 | Japanese quail GCF_001577835.1 |
47,008 (7.38 %) |
12,866 (2.54 %) |
31,341 (3.50 %) |
37,604 (4.36 %) |
41.28 (98.88 %) |
11,601 (1.12 %) |
9,642 (98.88 %) |
573,609 (7.86 %) |
321,128 (2.22 %) |
5,497,911 (19.81 %) |
17,977 (1.86 %) |
68 | leatherback sea turtle (v3 2020) GCF_009764565.2 |
62,576 (3.50 %) |
14,610 (1.03 %) |
16,359 (1.45 %) |
n/a | 43.35 (99.74 %) |
667 (0.26 %) |
40 (100.00 %) |
1,637,236 (15.13 %) |
304,730 (1.14 %) |
11,121,967 (34.21 %) |
35,485 (1.36 %) |
69 | lesser Egyptian jerboa (JJ0015 2012 genbank) GCA_000280705.1 |
n/a | 19,393 (1.38 %) |
20,311 (1.35 %) |
n/a | 41.87 (87.17 %) |
326,464 (12.87 %) |
337,359 (87.13 %) |
6,205,858 (38.76 %) |
832,823 (1.53 %) |
13,661,563 (33.98 %) |
26,669 (0.59 %) |
70 | lettuce (Salinas v1 2018) GCF_002870075.1 |
60,760 (2.83 %) |
16,272 (0.65 %) |
109,234 (6.86 %) |
n/a | 37.79 (92.71 %) |
350,251 (7.33 %) |
11,453 (100.00 %) |
946,986 (1.96 %) |
983,572 (3.65 %) |
12,334,735 (53.11 %) |
117,678 (2.02 %) |
71 | leopard (Maewha 2016 genbank) GCA_001857705.1 |
n/a | 18,874 (1.62 %) |
21,014 (1.44 %) |
n/a | 41.71 (96.17 %) |
214,953 (3.85 %) |
265,329 (96.15 %) |
5,246,283 (42.87 %) |
1,059,443 (5.13 %) |
14,265,514 (32.20 %) |
77,000 (2.45 %) |
72 | Ma's night monkey genbank GCA_000952055.2 |
n/a | 21,084 (1.92 %) |
22,287 (1.31 %) |
n/a | 40.74 (94.86 %) |
83,929 (5.15 %) |
112,850 (94.85 %) |
5,109,404 (47.71 %) |
734,754 (2.02 %) |
15,854,134 (33.62 %) |
36,070 (0.90 %) |
73 | Malayan pangolin (MP_PG03-UM 2016 genbank) GCA_001685135.1 |
n/a | 19,449 (1.56 %) |
24,645 (1.37 %) |
n/a | 40.78 (92.27 %) |
984,656 (7.81 %) |
80,669 (100.00 %) |
3,063,619 (35.20 %) |
866,306 (3.08 %) |
13,310,826 (28.76 %) |
35,558 (0.84 %) |
74 | malo sina (v1 2012) GCF_000231095.1 |
29,549 (16.44 %) |
15,120 (6.45 %) |
49,515 (30.69 %) |
n/a | 40.48 (93.32 %) |
20,693 (6.71 %) |
23,184 (93.29 %) |
115,049 (2.29 %) |
51,516 (1.90 %) |
1,488,940 (24.12 %) |
42,077 (12.05 %) |
75 | mangrove rivulus GCF_001649575.1 |
45,306 (11.02 %) |
14,523 (2.83 %) |
47,746 (6.85 %) |
30,573 (9.35 %) |
40.03 (94.35 %) |
29,388 (5.66 %) |
3,073 (100.00 %) |
345,782 (2.29 %) |
146,268 (1.33 %) |
4,717,260 (27.31 %) |
39,557 (2.69 %) |
76 | meerkat (BS45 2019 Broad) GCA_004023905.1 |
n/a | 21,726 (1.54 %) |
31,908 (1.39 %) |
n/a | 41.89 (99.96 %) |
4,153 (0.02 %) |
354,021 (99.98 %) |
4,835,157 (40.73 %) |
693,037 (1.32 %) |
13,779,279 (33.49 %) |
76,740 (2.37 %) |
77 | minke whale (2013 genbank) GCA_000493695.1 |
n/a | 19,298 (1.81 %) |
18,661 (1.42 %) |
n/a | 40.94 (94.06 %) |
173,296 (5.96 %) |
184,071 (94.04 %) |
4,041,828 (42.24 %) |
573,950 (1.48 %) |
13,504,295 (30.96 %) |
65,448 (1.38 %) |
78 | Mongolian gerbil (US013 2019 Broad) GCA_004026785.1 |
n/a | 21,302 (1.57 %) |
27,162 (1.27 %) |
n/a | 41.88 (99.90 %) |
11,139 (0.04 %) |
796,326 (99.96 %) |
5,253,752 (39.29 %) |
1,211,658 (3.13 %) |
13,894,596 (38.35 %) |
24,829 (0.69 %) |
79 | naked mole-rat (NMR 29 2012 genbank) GCA_000247695.1 |
n/a | 21,317 (1.73 %) |
20,856 (1.51 %) |
n/a | 40.21 (88.43 %) |
110,424 (11.59 %) |
114,652 (88.41 %) |
4,162,977 (32.77 %) |
484,933 (0.92 %) |
13,672,503 (27.63 %) |
31,950 (0.88 %) |
80 | narwhal (BS41 2019 Broad) GCA_004026685.1 |
n/a | 21,418 (1.52 %) |
34,189 (1.28 %) |
n/a | 41.35 (99.92 %) |
8,600 (0.03 %) |
653,473 (99.97 %) |
4,512,168 (44.82 %) |
592,047 (1.17 %) |
13,009,453 (37.18 %) |
63,033 (1.47 %) |
81 | New South Wales waratah (AGSP 2013) GCF_000471905.2 |
36,251 (5.66 %) |
10,150 (1.34 %) |
42,117 (8.90 %) |
n/a | 37.47 (94.63 %) |
39,556 (5.39 %) |
45,302 (94.61 %) |
396,916 (3.25 %) |
506,716 (6.41 %) |
4,768,175 (36.07 %) |
17,009 (0.90 %) |
82 | nine-banded armadillo (3-136 2012 Baylor genbank) GCA_000208655.2 |
n/a | 21,293 (1.15 %) |
25,302 (1.09 %) |
n/a | 40.77 (90.89 %) |
268,442 (9.13 %) |
314,971 (90.87 %) |
5,327,246 (49.09 %) |
651,311 (1.26 %) |
19,267,381 (38.27 %) |
139,552 (2.47 %) |
83 | northern white-cheeked gibbon (2012 GGSC) GCA_000146795.3 |
n/a | 20,134 (1.89 %) |
18,568 (1.14 %) |
n/a | 40.76 (93.09 %) |
180,468 (6.94 %) |
197,908 (93.06 %) |
5,169,984 (51.90 %) |
831,865 (4.16 %) |
15,243,657 (35.77 %) |
65,761 (1.00 %) |
84 | Norway rat BN7 genbank GCA_015227675.2 |
n/a | 21,523 (1.86 %) |
19,627 (1.36 %) |
n/a | 41.99 (99.19 %) |
581 (0.81 %) |
757 (99.19 %) |
4,895,563 (44.53 %) |
1,514,974 (3.57 %) |
13,450,428 (35.83 %) |
19,244 (0.46 %) |
85 | olive baboon (2017 HGSC RefSeq) GCF_000264685.3 |
84,433 (3.85 %) |
20,362 (1.83 %) |
21,971 (1.22 %) |
53,493 (1.55 %) |
40.99 (99.25 %) |
58,981 (0.76 %) |
118,811 (99.24 %) |
5,439,424 (52.46 %) |
1,068,912 (5.55 %) |
16,068,088 (38.71 %) |
95,595 (1.41 %) |
86 | olive baboon (2017 HGSC genbank) GCA_000264685.2 |
n/a | 20,319 (1.82 %) |
21,542 (1.19 %) |
n/a | 40.99 (99.25 %) |
58,981 (0.76 %) |
118,810 (99.24 %) |
5,524,514 (52.78 %) |
1,068,912 (5.55 %) |
16,068,031 (38.71 %) |
95,595 (1.41 %) |
87 | pike-perch GCF_008315115.1 |
56,221 (8.23 %) |
15,682 (2.23 %) |
52,929 (5.62 %) |
63,087 (6.22 %) |
40.92 (100.00 %) |
94 (0.00 %) |
1,313 (100.00 %) |
601,762 (5.04 %) |
569,876 (7.39 %) |
4,713,605 (36.32 %) |
39,545 (1.93 %) |
88 | platypus (v1 2019) GCF_004115215.1 |
56,708 (3.09 %) |
14,785 (1.26 %) |
19,402 (1.68 %) |
42,892 (2.60 %) |
46.13 (99.18 %) |
522 (0.82 %) |
305 (100.00 %) |
5,069,299 (51.33 %) |
577,434 (2.88 %) |
9,110,403 (48.91 %) |
87,764 (6.47 %) |
89 | polar bear (Baiyulong BGI 2014 genbank) GCA_000687225.1 |
n/a | 18,495 (1.67 %) |
15,243 (1.37 %) |
n/a | 41.65 (98.35 %) |
110,343 (1.67 %) |
134,161 (98.33 %) |
4,221,025 (40.96 %) |
553,193 (1.29 %) |
13,765,526 (29.91 %) |
54,906 (1.17 %) |
90 | Przewalski's horse (Burgud 2014 genbank) GCA_000696695.1 |
n/a | 19,564 (1.68 %) |
22,124 (1.36 %) |
n/a | 41.27 (99.13 %) |
80,963 (0.88 %) |
134,059 (99.12 %) |
3,917,534 (41.44 %) |
435,606 (1.73 %) |
14,738,354 (28.36 %) |
40,752 (0.94 %) |
91 | puma (SC36_Marlon 2018 genbank) GCA_003327715.1 |
n/a | 17,665 (1.56 %) |
16,565 (1.29 %) |
n/a | 41.36 (95.34 %) |
178,992 (4.69 %) |
2,174 (100.00 %) |
4,884,619 (42.70 %) |
833,136 (1.76 %) |
13,705,706 (31.28 %) |
58,912 (1.65 %) |
92 | pygmy chimpanzee (Ulindi genbank 2015) GCA_000258655.2 |
n/a | 19,951 (1.94 %) |
19,039 (1.18 %) |
n/a | 40.74 (82.95 %) |
156,797 (17.06 %) |
121,337 (82.94 %) |
5,136,492 (50.91 %) |
775,493 (1.63 %) |
15,570,612 (30.28 %) |
43,049 (0.71 %) |
93 | rabbit (Thorbecke 2009 Broad genbank) GCA_000003625.1 |
n/a | 18,676 (1.38 %) |
20,095 (1.24 %) |
n/a | 43.75 (95.14 %) |
80,789 (4.88 %) |
84,024 (95.12 %) |
4,884,561 (44.65 %) |
883,943 (1.73 %) |
13,254,559 (38.27 %) |
110,338 (2.33 %) |
94 | Rhesus monkey (2015 Baylor) GCA_000772875.3 |
n/a | 20,558 (1.71 %) |
22,141 (1.12 %) |
n/a | 40.95 (97.08 %) |
64,538 (2.91 %) |
348,579 (97.09 %) |
5,846,699 (54.61 %) |
1,429,378 (9.24 %) |
16,512,587 (40.26 %) |
98,572 (1.29 %) |
95 | rifleman (BGI 2014) GCF_000695815.1 |
16,166 (2.37 %) |
12,048 (1.64 %) |
27,305 (2.06 %) |
n/a | 41.63 (99.55 %) |
66,437 (0.46 %) |
120,312 (99.54 %) |
458,730 (8.48 %) |
217,040 (2.27 %) |
5,855,355 (18.33 %) |
7,602 (0.24 %) |
96 | ring-tailed lemur BS26 Broad 2019 GCA_004024665.1 |
n/a | 21,125 (1.90 %) |
29,864 (1.51 %) |
n/a | 41.13 (99.93 %) |
4,599 (0.02 %) |
580,026 (99.98 %) |
3,840,645 (39.25 %) |
675,921 (1.83 %) |
13,841,750 (31.45 %) |
59,440 (1.72 %) |
97 | Rio pearlfish (Nwh7 v1 2020) GCF_014905685.1 |
25,353 (3.88 %) |
14,334 (1.56 %) |
58,475 (4.46 %) |
n/a | 41.06 (92.01 %) |
100,521 (8.02 %) |
18,998 (100.00 %) |
642,988 (3.38 %) |
444,158 (3.06 %) |
6,203,124 (42.81 %) |
52,308 (2.11 %) |
98 | Ryukyu mouse (2017 EBI genbank) GCA_900094665.2 |
n/a | 21,304 (2.26 %) |
18,211 (1.40 %) |
n/a | 41.70 (89.05 %) |
306,650 (10.98 %) |
30,919 (92.71 %) |
4,878,260 (40.08 %) |
1,351,707 (2.59 %) |
12,965,226 (27.49 %) |
16,050 (0.44 %) |
99 | sea otter (GAN:26980312 2017 genbank) GCA_002288905.2 |
n/a | 18,591 (1.64 %) |
20,913 (1.44 %) |
n/a | 41.56 (98.79 %) |
23,134 (1.21 %) |
29,588 (98.79 %) |
4,702,292 (41.42 %) |
721,749 (1.39 %) |
14,065,592 (32.89 %) |
55,388 (1.87 %) |
100 | Siamese fighting fish (v2 2019) GCF_900634795.2 |
54,389 (16.95 %) |
14,751 (4.20 %) |
56,791 (10.87 %) |
62,753 (13.02 %) |
45.30 (99.99 %) |
328 (0.01 %) |
70 (100.00 %) |
255,553 (3.51 %) |
184,269 (4.62 %) |
2,010,934 (23.88 %) |
72,126 (13.08 %) |
101 | silvery gibbon GCF_009828535.1 |
54,238 (2.74 %) |
17,887 (2.00 %) |
18,517 (1.25 %) |
n/a | 41.17 (98.20 %) |
18,567 (1.80 %) |
18,392 (100.00 %) |
4,399,357 (50.55 %) |
711,948 (2.37 %) |
12,623,705 (36.55 %) |
67,835 (1.30 %) |
102 | southern white rhinoceros (SDZICR_KB13650 2012 genbank) GCA_000283155.1 |
n/a | 18,551 (1.79 %) |
19,747 (1.44 %) |
n/a | 40.90 (96.05 %) |
54,737 (3.96 %) |
57,823 (96.04 %) |
3,824,807 (39.33 %) |
421,693 (0.97 %) |
14,765,476 (28.93 %) |
36,281 (1.02 %) |
103 | soybean (US DOE JGI-PGF v1 2018) GCF_000004515.5 |
85,123 (9.72 %) |
27,647 (3.06 %) |
77,190 (11.83 %) |
n/a | 34.77 (97.65 %) |
15,995 (2.36 %) |
17,187 (97.64 %) |
834,651 (37.35 %) |
436,225 (5.65 %) |
5,341,721 (45.30 %) |
35,897 (1.47 %) |
104 | Sumatran orangutan (2018 genbank) GCA_002880775.3 |
n/a | 20,174 (1.79 %) |
20,994 (1.15 %) |
n/a | 40.80 (99.29 %) |
553 (0.70 %) |
5,813 (99.30 %) |
5,497,148 (54.41 %) |
1,048,361 (8.01 %) |
15,948,575 (40.68 %) |
39,481 (0.87 %) |
105 | Tasmanian devil GCF_000189315.1 |
32,527 (1.79 %) |
16,114 (0.84 %) |
16,157 (0.94 %) |
n/a | 36.05 (92.36 %) |
201,403 (7.66 %) |
237,291 (92.34 %) |
6,635,117 (42.69 %) |
1,240,681 (2.07 %) |
20,998,733 (36.61 %) |
23,155 (0.38 %) |
106 | thirteen-lined ground squirrel (2011) GCF_000236235.1 |
41,886 (2.61 %) |
19,185 (1.69 %) |
18,099 (1.44 %) |
33,336 (2.34 %) |
39.91 (93.27 %) |
141,005 (6.75 %) |
153,488 (93.25 %) |
4,262,694 (35.63 %) |
640,337 (1.64 %) |
14,116,066 (27.91 %) |
28,321 (0.64 %) |
107 | Ugandan red Colobus GCF_002776525.2 |
66,965 (2.69 %) |
21,958 (1.85 %) |
24,388 (1.22 %) |
55,722 (1.95 %) |
40.60 (97.10 %) |
63,620 (2.91 %) |
47,449 (100.00 %) |
5,699,639 (51.61 %) |
1,066,606 (2.87 %) |
16,603,622 (37.49 %) |
71,084 (1.08 %) |
108 | Upper Galilee mountains blind mole rat (#2095 2014 genbank) GCA_000622305.1 |
n/a | 19,685 (1.25 %) |
21,268 (1.20 %) |
n/a | 41.26 (95.18 %) |
201,121 (4.83 %) |
356,096 (95.17 %) |
6,165,270 (34.95 %) |
1,197,778 (2.77 %) |
16,282,333 (36.21 %) |
22,905 (0.49 %) |
109 | valley oak (v3.0 2019) GCF_001633185.1 |
63,555 (8.16 %) |
16,886 (1.90 %) |
72,876 (14.48 %) |
n/a | 35.38 (99.77 %) |
1,674 (0.23 %) |
2,010 (100.00 %) |
800,389 (3.72 %) |
460,244 (7.41 %) |
5,439,256 (37.83 %) |
19,635 (1.10 %) |
110 | water buffalo (Mediterranean 2013) GCA_000471725.1 |
n/a | 20,245 (1.49 %) |
24,230 (1.29 %) |
n/a | 42.11 (97.39 %) |
263,385 (2.62 %) |
630,367 (97.38 %) |
5,997,926 (47.35 %) |
466,019 (1.02 %) |
13,822,739 (40.29 %) |
93,080 (1.71 %) |
111 | Weddell seal (WS11-02 2013 genbank) GCA_000349705.1 |
n/a | 21,044 (1.72 %) |
22,320 (1.43 %) |
n/a | 41.39 (70.44 %) |
152,836 (29.58 %) |
169,546 (70.42 %) |
4,420,479 (41.72 %) |
471,250 (0.66 %) |
13,410,191 (22.09 %) |
48,738 (1.01 %) |
112 | western European hedgehog (2012 genbank) GCA_000296755.1 |
n/a | 18,034 (1.33 %) |
19,779 (1.35 %) |
n/a | 41.54 (85.94 %) |
219,764 (14.09 %) |
225,566 (85.91 %) |
6,527,125 (45.87 %) |
1,271,531 (2.29 %) |
12,374,069 (42.02 %) |
28,528 (0.71 %) |
113 | western lowland gorilla (Susie 2016) GCA_900006655.3 |
n/a | 20,323 (1.77 %) |
22,069 (1.15 %) |
n/a | 40.71 (99.64 %) |
768 (0.36 %) |
16,065 (99.64 %) |
5,373,630 (50.30 %) |
1,025,389 (10.17 %) |
15,954,613 (41.78 %) |
53,557 (1.01 %) |
114 | western painted turtle (v303 2014) GCF_000241765.3 |
51,681 (3.25 %) |
15,203 (1.04 %) |
22,272 (1.67 %) |
46,230 (2.32 %) |
44.19 (91.88 %) |
183,744 (8.14 %) |
262,326 (91.86 %) |
2,767,141 (30.92 %) |
316,971 (0.98 %) |
11,856,824 (28.95 %) |
104,231 (1.84 %) |
115 | white-footed mouse GCF_004664715.1 |
46,167 (2.56 %) |
20,389 (1.72 %) |
20,857 (1.46 %) |
n/a | 42.23 (100.00 %) |
79 (0.00 %) |
1,763 (100.00 %) |
4,919,207 (29.60 %) |
1,258,088 (2.85 %) |
14,005,845 (33.01 %) |
23,475 (0.69 %) |
116 | white-tailed deer (Pink-7 2017 genbank) GCA_002102435.1 |
n/a | 20,653 (1.75 %) |
23,083 (1.50 %) |
n/a | 41.55 (99.10 %) |
107,030 (0.91 %) |
48,652 (99.10 %) |
4,799,958 (41.28 %) |
413,128 (2.59 %) |
13,296,686 (34.22 %) |
44,165 (1.19 %) |
117 | white-tufted-ear marmoset (CJ-08-46 2017) GCA_002754865.1 |
n/a | 21,754 (1.86 %) |
21,668 (1.22 %) |
n/a | 40.77 (99.67 %) |
48,495 (0.33 %) |
88,439 (99.67 %) |
5,195,965 (48.83 %) |
825,714 (3.60 %) |
15,372,168 (38.05 %) |
34,994 (0.85 %) |
118 | white-tufted-ear marmoset (2010 Wash U) GCF_000004665.1 |
58,109 (2.92 %) |
21,732 (1.90 %) |
21,605 (1.29 %) |
n/a | 40.85 (94.45 %) |
187,214 (5.57 %) |
201,523 (94.43 %) |
5,022,252 (48.60 %) |
768,432 (2.30 %) |
15,303,718 (34.75 %) |
35,805 (0.79 %) |
119 | white-tufted-ear marmoset (cj1700 genbank) GCA_009663435.1 |
n/a | 21,762 (1.88 %) |
22,357 (1.36 %) |
n/a | 40.85 (98.70 %) |
370 (1.30 %) |
1,360 (98.70 %) |
5,122,415 (49.40 %) |
818,502 (3.68 %) |
15,232,829 (38.20 %) |
36,656 (0.90 %) |
120 | wild Bactrian camel (CB1 Naran 2013 genbank) GCA_000311805.2 |
n/a | 18,785 (1.94 %) |
17,252 (1.62 %) |
n/a | 41.28 (98.83 %) |
60,971 (1.18 %) |
68,871 (98.82 %) |
3,098,525 (34.75 %) |
353,630 (1.23 %) |
12,349,553 (25.12 %) |
45,436 (1.02 %) |
121 | wire-tailed manakin (2018) GCF_003945595.1 |
50,529 (5.75 %) |
12,929 (1.88 %) |
24,817 (2.40 %) |
n/a | 42.30 (100.00 %) |
102 (0.00 %) |
3,744 (100.00 %) |
510,461 (7.13 %) |
300,638 (2.31 %) |
6,414,267 (20.54 %) |
28,268 (2.21 %) |
122 | woodchuck GCA_901343595.1 |
n/a | 20,813 (1.60 %) |
23,199 (1.43 %) |
n/a | 40.00 (97.18 %) |
57,045 (2.82 %) |
105,556 (97.18 %) |
4,756,333 (33.73 %) |
836,503 (2.41 %) |
14,755,960 (31.13 %) |
34,151 (0.87 %) |
123 | Yangtze finless porpoise (v1 2018) GCF_003031525.1 |
43,312 (2.49 %) |
18,741 (1.80 %) |
19,643 (1.46 %) |
n/a | 41.28 (99.29 %) |
52,647 (0.72 %) |
66,346 (99.28 %) |
3,926,819 (42.04 %) |
540,765 (1.65 %) |
12,691,760 (32.87 %) |
59,052 (1.48 %) |
124 | Yangtze River dolphin (BGI 2013 genbank) GCA_000442215.1 |
n/a | 19,219 (1.73 %) |
27,456 (1.66 %) |
n/a | 41.30 (98.69 %) |
124,797 (1.33 %) |
155,509 (98.67 %) |
4,277,556 (44.10 %) |
690,534 (1.95 %) |
13,025,034 (35.19 %) |
67,035 (1.82 %) |
125 | yellow-bellied marmot GCF_003676075.1 |
41,573 (2.14 %) |
19,863 (1.62 %) |
21,279 (1.39 %) |
n/a | 39.88 (97.82 %) |
38,354 (2.18 %) |
69,503 (97.82 %) |
4,540,536 (33.43 %) |
799,659 (1.95 %) |
14,322,765 (32.58 %) |
34,127 (0.91 %) |
126 | zebra finch (v1 2019) GCF_003957565.1 |
51,472 (7.16 %) |
13,210 (2.01 %) |
25,575 (2.63 %) |
38,869 (7.10 %) |
42.04 (99.78 %) |
312 (0.22 %) |
135 (100.00 %) |
545,004 (8.45 %) |
550,118 (4.01 %) |
6,519,872 (21.47 %) |
30,053 (2.56 %) |
127 | zebu cattle (Nelore 2014 genbank) GCA_000247795.2 |
n/a | 18,599 (1.58 %) |
18,779 (1.29 %) |
n/a | 41.75 (92.62 %) |
6,941,272 (7.66 %) |
253,769 (92.59 %) |
5,118,783 (46.84 %) |
358,908 (0.88 %) |
13,431,620 (36.60 %) |
35,241 (0.84 %) |
TOTALS: | total assembly count 127 |
Additional hubs with collections of assemblies | |||
---|---|---|---|
Collection | Hub index pages: | Assembly statistics: | Track statistics: |
Primates | 52 assemblies | assembly stats | track stats |
Mammals | 291 assemblies | assembly stats | track stats |
Birds | 113 assemblies | assembly stats | track stats |
Fishes | 130 assemblies | assembly stats | track stats |
other vertebrates | 48 assemblies | assembly stats | track stats |
Invertebrates | 399 assemblies | assembly stats | track stats |
Plants | 146 assemblies | assembly stats | track stats |
Fungi | 416 assemblies | assembly stats | track stats |
VGP - Vertebrate Genome Project | 233 assemblies | assembly stats | track stats |
legacy/superseded | 127 assemblies | assembly stats | track stats |