Invertebrate Genomes assembly hubs

Assemblies from NCBI/Genbank/Refseq sources, subset of invertebrate only.

How to view the hub

Options:

  1. The links to the genome browser in the table below will attach that one specific assembly to the genome browser. This is most likely what you want. Alternatively, the entire set of assemblies can be attached as one group to the genome browser with the following links depending upon which of our mirror site browsers you prefer to use:
    attach all assemblies to selected site:   genome.ucsc.edu   genome-euro.ucsc.edu   genome-asia.ucsc.edu
  2. To manually attach all the assemblies in this hub to genome browsers that are not one of the three UCSC mirror sites:
    1. From the blue navigation bar, go to My Data -> Track Hubs
    2. Then select the My Hubs tab and enter this URL into the textbox:
      https://hgdownload.soe.ucsc.edu/hubs/invertebrate/hub.txt
    3. Once you have added the URL to the entry form, press the Add Hub button to add the hub.

After adding the hub, you will be redirected to the gateway page. The genome assemblies can be selected from the Invertebrate Hub Assembly dropdown menu. Instead of adding all the assemblies in one collected group, use the individual view in browser in the table below.

See also: assembly statisticstrack statistics <== additional information for these assemblies.


Data resource links

NOTE: Click on the column headers to sort the table by that column

The common name and view in browser will attach only that single assembly to the genome browser.
The scientific name and data download link provides access to the files for that one assembly hub.
The other links provide access to NCBI resources for these assemblies.
count common name and
view in browser
scientific name
and data download
NCBI assembly BioSampleBioProject assembly date,
source link
1 Adonis blue Lysandra bellargus GCA_905333045.1_ilLysBell1.1 SAMEA7523471 PRJEB43476 2021-03-19
2 African malaria mosquito Anopheles gambiae str. PEST GCF_000005575.2_AgamP3 SAMN02952903 PRJNA1438 2006-10-16
3 alfalfa leafcutting bee Megachile rotundata GCF_000220905.1_MROT_1.0 SAMN02953795 PRJNA66515 2011-07-19
4 Alkali bee Nomia melanderi GCF_003710045.1_USU_Nmel_1.2 SAMN10185933 PRJNA494873 2018-11-02
5 American grasshopper (TAMUIC-IGC-003095 2022) Schistocerca americana GCF_021461395.2_iqSchAmer2.1 SAMN18214781 PRJNA772266 2022-02-14
6 American house dust mite (JKM2019 2021) Dermatophagoides farinae GCF_020809275.1_ASM2080927v1 SAMN10743607 PRJNA512594 2021-11-09
7 American lobster Homarus americanus GCF_018991925.1_GMGI_Hamer_2.0 SAMN16248921 PRJNA655509 2021-06-23
8 amphipods H.azteca (HAZT.00-mixed v2.0.2 2019) Hyalella azteca GCF_000764305.2_Hazt_2.0.2 SAMN02978968 PRJNA243935 2019-09-09
9 ant A.cephalotes Atta cephalotes GCF_000143395.1_Attacep1.0 SAMN02953774 PRJNA48091 2010-07-06
10 ant A.colombica Atta colombica GCF_001594045.1_Acol1.0 SAMN03982875 PRJNA292624 2016-03-25
11 ant C.costatus Cyphomyrmex costatus GCF_001594065.1_Ccosl1.0 SAMN03982885 PRJNA292630 2016-03-25
12 ant D.quadriceps Dinoponera quadriceps GCF_001313825.1_ASM131382v1 SAMN02869781 PRJNA253275 2015-10-13
13 ant F.exsecta Formica exsecta GCF_003651465.1_ASM365146v1 SAMN07344805 PRJNA393850 2018-10-15
14 ant N.fulva (TAMU-Nful-2015 v1.1 2019) Nylanderia fulva GCF_005281655.2_TAMU_Nfulva_1.1 SAMN10848236 PRJNA517949 2019-05-13
15 ant O.brunneus Odontomachus brunneus GCF_010583005.1_Obru_v1 SAMN08712586 PRJNA432980 2020-02-13
16 ant P.gracilis Pseudomyrmex gracilis GCF_002006095.1_ASM200609v1 SAMN03219222 PRJNA268384 2017-02-23
17 ant T.cornetzi Trachymyrmex cornetzi GCF_001594075.1_Tcor1.0 SAMN03982882 PRJNA292627 2016-03-25
18 ant T.curvispinosus Temnothorax curvispinosus GCF_003070985.1_ASM307098v1 SAMN08906336 PRJNA449537 2018-04-24
19 ant T.septentrionalis Trachymyrmex septentrionalis GCF_001594115.1_Tsep1.0 SAMN03982881 PRJNA292625 2016-03-25
20 ant T.zeteki Trachymyrmex zeteki GCF_001594055.1_Tzet1.0 SAMN03982884 PRJNA292628 2016-03-31
21 ant V.emeryi Vollenhovia emeryi GCF_000949405.1_V.emery_V1.0 SAMD00026325 PRJDB3517 2015-03-06
22 aphids (Langfang-1 2019) Sitobion miscanthi GCA_008086715.1_ASM808671v1 SAMN11401706 PRJNA532495 2019-08-28
23 aphids M.sacchari Melanaphis sacchari GCF_002803265.2_SCAv2.0 SAMN07757676 PRJNA413550 2018-06-22
24 apple maggot Rhagoletis pomonella GCF_013731165.1_Rhpom_1.0 SAMN05388941 PRJNA328976 2020-06-18
25 Argentine ant Linepithema humile GCF_000217595.1_Lhum_UMD_V04 SAMN02767796 PRJNA45799 2011-06-10
26 Asian citrus psyllid Diaphorina citri GCF_000475195.1_Diaci_psyllid_genome_assembly_version_1.1 SAMN00100712 PRJNA29447 2013-10-22
27 Asian corn borer Ostrinia furnacalis GCF_004193835.1_ASM419383v1 SAMN08335163 PRJNA429307 2019-02-13
28 Asian giant hornet Vespa mandarinia GCF_014083535.2_V.mandarinia_Nanaimo_p1.0 SAMN15675875 PRJNA649644 2020-08-06
29 Asian longhorned beetle Anoplophora glabripennis GCF_000390285.2_Agla_2.0 SAMN02222868 PRJNA167479 2017-12-12
30 Asian malaria mosquito Anopheles stephensi GCF_013141755.1_UCI_ANSTEP_V1.0 SAMN14792744 PRJNA629843 2020-06-09
31 Asian swallowtail Papilio xuthus GCF_000836235.1_Pxut_1.0 SAMD00018698 PRJDB2956 2015-02-02
32 Asian tiger mosquito Aedes albopictus GCF_006496715.1_Aalbo_primary.1 SAMN11317331 PRJNA530512 2019-06-28
33 Asiatic honeybee Apis cerana GCF_001442555.1_ACSNU-2.0 SAMN02592885 PRJNA235974 2015-11-12
34 Atlantic horseshoe crab Limulus polyphemus GCF_000517525.1_Limulus_polyphemus-2.1.2 SAMN02953878 PRJNA20489 2014-01-03
35 Australian red waratah sea anemone Actinia tenebrosa GCF_009602425.1_ASM960242v1 SAMN10439458 PRJNA505921 2019-11-06
36 Australian sheep blowfly Lucilia cuprina GCF_000699065.1_Lcup_2.0 SAMN02422564 PRJNA203545 2017-12-15
37 Australian sheep blowfly (Lc7/37 2022) Lucilia cuprina GCF_022045245.1_ASM2204524v1 SAMN23894005 PRJNA787202 2022-02-08
38 B.malayi (v4 2019 agent of lymphatic filariasis) Brugia malayi GCF_000002995.4_B_malayi-4.0 SAMEA3146321 PRJNA10729 2019-06-02
39 bark scorpion Centruroides sculpturatus GCF_000671375.1_Cexi_2.0 SAMN02617800 PRJNA168116 2017-12-12
40 bat star Patiria miniata GCF_015706575.1_ASM1570657v1 SAMN13694171 PRJNA597964 2020-12-01
41 bed bug Cimex lectularius GCF_000648675.2_Clec_2.1 SAMN02649412 PRJNA167477 2017-12-12
42 bee B.bifarius Bombus bifarius GCF_011952205.1_Bbif_JDL3187 SAMN13353518 PRJNA591177 2020-04-03
43 bee B.pyrosoma Bombus pyrosoma GCF_014825855.1_ASM1482585v1 SAMN15897728 PRJNA659133 2020-10-02
44 bee B.vancouverensis nearcticus Bombus vancouverensis nearcticus GCF_011952275.1_Bvanc_JDL1245 SAMN14341632 PRJNA611633 2020-04-03
45 bee B.vosnesenskii Bombus vosnesenskii GCF_011952255.1_Bvos_JDL3184-5_v1.1 SAMN14404301 PRJNA611634 2020-04-03
46 bee C.calcarata Ceratina calcarata GCF_001652005.1_ASM165200v1 SAMN04252592 PRJNA299559 2016-05-25
47 bee C.gigas Colletes gigas GCF_013123115.1_ASM1312311v1 SAMN13678811 PRJNA597580 2020-05-19
48 bee D.novaeangliae Dufourea novaeangliae GCF_001272555.1_ASM127255v1 SAMN03837760 PRJNA279825 2015-08-21
49 bee E.mexicana Eufriesea mexicana GCF_001483705.1_ASM148370v1 SAMN03801430 PRJNA279814 2016-05-09
50 bee F.varia Frieseomelitta varia GCF_011392965.1_Fvar_1.2 SAMN11115949 PRJNA528016 2020-03-17
51 bee H.laboriosa Habropoda laboriosa GCF_001263275.1_ASM126327v1 SAMN03462987 PRJNA279436 2015-08-13
52 bee M.genalis Megalopta genalis GCF_011865705.1_USU_MGEN_1.2 SAMN10185932 PRJNA494872 2020-04-01
53 beet armyworm Spodoptera exigua GCA_011316535.1_NJAU_Sexi_v1 SAMN13242354 PRJNA588360 2020-03-17
54 beetle H.axyridis Harmonia axyridis GCF_914767665.1_icHarAxyr1.1 SAMEA7520208 PRJEB47373 2021-09-16
55 beetle N.vespilloides Nicrophorus vespilloides GCF_001412225.1_Nicve_v1.0 SAMN03733533 PRJNA284849 2015-10-23
56 beetle O.taurus Onthophagus taurus GCF_000648695.1_Otau_2.0 SAMN02628949 PRJNA167478 2017-10-31
57 Belcher's lancelet Branchiostoma belcheri GCF_001625305.1_Haploidv18h27 SAMN04869859 PRJNA214454 2016-04-21
58 bivalves P.maximus Pecten maximus GCF_902652985.1_xPecMax1.1 SAMEA994736 PRJEB35330 2019-11-26
59 black flour beetle Tribolium madens GCF_015345945.1_Tmad_KSU_1.1 SAMN16398860 PRJNA668153 2020-11-10
60 black tiger shrimp Penaeus monodon GCF_015228065.1_NSTDA_Pmon_1 SAMN14330694 PRJNA611030 2020-11-05
61 black-arched tussock moth Lymantria monacha GCA_905163515.1_ilLymMona1.1 SAMEA7519912 PRJEB42031 2021-01-28
62 black-legged tick (JCVI 2018) Ixodes scapularis GCF_002892825.2_ISE6_asm2.2_deduplicated SAMN06329993 PRJNA345486 2018-09-28
63 black-legged tick (U.Maryland v2 2021) Ixodes scapularis GCF_016920785.2_ASM1692078v2 SAMN16793453 PRJNA678334 2021-06-23
64 blackleg tortoiseshell Nymphalis polychloros GCA_905220585.1_ilNymPoly1.1 SAMEA7523477 PRJEB42893 2021-02-16
65 blacklip abalone Haliotis rubra GCF_003918875.1_ASM391887v1 SAMN09981888 PRJNA489521 2018-12-07
66 bloodfluke planorb Biomphalaria glabrata GCF_000457365.1_ASM45736v1 SAMN02953846 PRJNA12879 2013-09-06
67 brachiopods L.anatina Lingula anatina GCF_001039355.2_LinAna2.0 SAMN03770811 PRJNA286275 2018-01-26
68 brown argus (refseq 2021) Aricia agestis GCF_905147365.1_ilAriAges1.1 SAMEA7523300 PRJEB41901 2021-01-28
69 brown dog tick Rhipicephalus sanguineus GCF_013339695.1_ASM1333969v1 SAMN14941062 PRJNA633311 2020-06-16
70 brown marmorated stink bug Halyomorpha halys GCF_000696795.2_Hhal_2.0 SAMN02737379 PRJNA168118 2017-12-15
71 brown planthopper (BPH 2020) Nilaparvata lugens GCF_014356525.1_ASM1435652v1 SAMN13382557 PRJNA591478 2020-09-09
72 brown planthopper (NLH13 2014) Nilaparvata lugens GCF_000757685.1_NilLug1.0 SAMN03077662 PRJNA177647 2014-09-24
73 buff-tailed bumblebee Bombus terrestris GCF_000214255.1_Bter_1.0 SAMN00009041 PRJNA45869 2011-06-03
74 butterflies V.tameamea Vanessa tameamea GCF_002938995.1_ASM293899v1 SAMN07695352 PRJNA412104 2018-02-23
75 butterfly C.semiargus Cyaniris semiargus GCA_905187585.1_ilCyaSemi1.1 SAMEA7523311 PRJEB41908 2021-02-02
76 butterfly E.isabella Eueides isabella GCA_019049475.1_ASM1904947v1 SAMN17088387 PRJNA685624 2021-06-29
77 butterfly L.camilla Limenitis camilla GCA_905147385.1_ilLimCami1.1 SAMEA7523310 PRJEB41923 2021-01-28
78 butterfly L.sinapis Leptidea sinapis GCA_905404315.1_ilLepSina1.1 SAMEA7523467 PRJEB43998 2021-04-15
79 butterfly M.athalia Mellicta athalia GCA_905220545.1_ilMelAtha1.1 SAMEA7523312 PRJEB42889 2021-02-16
80 butterfly P.argus Plebejus argus GCA_905404155.1_ilPleArgu1.1 SAMEA7523294 PRJEB44005 2021-04-15
81 butterfly P.napi (v1.2 refseq 2022) Pieris napi GCF_905475465.1_ilPieNapi1.2 SAMEA7523287 PRJEB44052 2022-01-30
82 cabbage looper Trichoplusia ni GCF_003590095.1_tn1 SAMN07304761 PRJNA336361 2018-09-24
83 cabbage moth Mamestra brassicae GCA_905163435.1_ilMamBras1.1 SAMEA7524129 PRJEB42032 2021-01-28
84 cabbage white Pieris rapae GCF_001856805.1_P_rapae_3842_assembly_v2 SAMN04866668 PRJNA318727 2016-10-16
85 cabbage white (refseq 2021) Pieris rapae GCF_905147795.1_ilPieRapa1.1 SAMEA7523164 PRJEB41952 2021-01-28
86 California sea hare Aplysia californica GCF_000002075.1_AplCal3.0 SAMN02953658 PRJNA13635 2013-05-15
87 cat flea Ctenocephalides felis GCF_003426905.1_ASM342690v1 SAMN09779028 PRJNA484943 2018-08-24
88 Central American locust (TAMUIC-IGC-003096 2022) Schistocerca piceifrons GCF_021461385.2_iqSchPice1.1 SAMN18214782 PRJNA772266 2022-02-14
89 cephalopods Octopus bimaculoides GCF_001194135.1_Octopus_bimaculoides_v2_0 SAMN03271701 PRJNA270931 2015-08-18
90 clonal raider ant Ooceraea biroi GCF_003672135.1_Obir_v5.4 SAMN09281275 PRJNA420369 2018-10-23
91 clouded yellow (refseq 2021) Colias croceus GCF_905220415.1_ilColCroc2.1 SAMEA7523360 PRJEB42878 2021-02-16
92 coleseed sawfly Athalia rosae GCF_000344095.2_Aros_2.0 SAMN02953829 PRJNA167403 2018-01-03
93 Colorado potato beetle Leptinotarsa decemlineata GCF_000500325.1_Ldec_2.0 SAMN02376991 PRJNA171749 2017-10-31
94 common branded skipper Hesperia comma GCA_905404135.1_ilHesComm1.1 SAMEA7523119 PRJEB43996 2021-04-15
95 common copper Lycaena phlaeas GCA_905333005.1_ilLycPhla1.1 SAMEA7523293 PRJEB43473 2021-03-11
96 common eastern bumble bee Bombus impatiens GCF_000188095.3_BIMP_2.2 SAMN02953787 PRJNA61101 2011-09-22
97 common eastern firefly Photinus pyralis GCF_008802855.1_Ppyr1.3 SAMN08132578 PRJNA378805 2019-10-02
98 common green bottle fly Lucilia sericata GCF_015586225.1_ASM1558622v1 SAMN13896454 PRJNA602506 2020-11-18
99 common house spider (v3 2019) Parasteatoda tepidariorum GCF_000365465.3_Ptep_3.0 SAMN02364452 PRJNA167405 2019-06-14
100 common Mormon Papilio polytes GCF_000836215.1_Ppol_1.0 SAMD00018697 PRJDB2954 2015-02-02
101 common paper wasp Polistes fuscatus GCF_010416935.1_CU_Pfus_HIC SAMN09724720 PRJNA482994 2020-02-11
102 common water flea (KAP4 2021) Daphnia pulex GCF_021134715.1_ASM2113471v1 SAMN22866247 PRJNA777597 2021-12-09
103 common yellow swallowtail (Sanger 2021) Papilio machaon GCF_912999745.1_ilPapMach1.1 SAMEA7523121 PRJEB47027 2021-08-18
104 common yellow swallowtail (ya'a_city_454_Pm BGI 2015) Papilio machaon GCF_001298355.1_Pap_ma_1.0 SAMN03290678 PRJNA270386 2015-09-28
105 corn earworm (HzStark_Cry1AcR 2022) Helicoverpa zea GCF_022581195.2_ilHelZeax1.1 SAMN25818888 PRJNA807638 2022-03-18
106 corn leaf aphid Rhopalosiphum maidis GCF_003676215.2_ASM367621v3 SAMN09625554 PRJNA480062 2019-02-06
107 cotton aphid Aphis gossypii GCF_004010815.1_ASM401081v1 SAMN08384359 PRJNA431119 2019-01-10
108 cotton bollworm Helicoverpa armigera GCF_002156985.1_Harm_1.0 SAMN06608624 PRJNA378437 2017-05-22
109 crinoids A.japonica Anneissia japonica GCF_011630105.1_ASM1163010v1 SAMN12241982 PRJNA553656 2020-03-23
110 crown-of-thorns starfish Acanthaster planci GCF_001949145.1_OKI-Apl_1.0 SAMD00054104 PRJDB3175 2016-12-20
111 crustacean A.amphitrite Amphibalanus amphitrite GCF_019059575.1_NRLGWU_Aamphi_draft SAMN19549327 PRJNA734913 2021-06-29
112 crustacean D.magna (NIES Sungkyunkwan U. 2021) Daphnia magna GCF_020631705.1_ASM2063170v1.1 SAMN19716601 PRJNA738190 2021-10-27
113 crustacean D.magna (SK Sungkyunkwan U. 2019) Daphnia magna GCF_003990815.1_ASM399081v1 SAMN10036042 PRJNA490418 2019-01-07
114 crustacean E.affinis Eurytemora affinis GCF_000591075.1_Eaff_2.0 SAMN02302763 PRJNA203087 2017-12-12
115 crustacean P.japonicus Penaeus japonicus GCF_017312705.1_Mj_TUMSAT_v1.0 SAMD00276454 PRJDB11151 2021-02-12
116 crustacean P.pollicipes Pollicipes pollicipes GCF_011947565.2_Ppol_2 SAMN14444043 PRJNA614970 2020-10-27
117 crustaceans (SC F1-1A 2022) Daphnia pulicaria GCF_021234035.1_SC_F0-13Bv2 SAMN21387128 PRJNA762352 2022-01-11
118 damselflies Ischnura elegans GCF_921293095.1_ioIscEleg1.1 SAMEA7521125 PRJEB49079 2021-12-05
119 diamondback moth (LV U. Adelaide 2021) Plutella xylostella GCA_019096205.1_PxLV.1 SAMN18055545 PRJNA704777 2021-07-02
120 diamondback moth (U. Liverpool 2020) Plutella xylostella GCF_905116875.1_Haplomerged_assembly SAMEA5988831 PRJEB34571 2020-11-22
121 dogface butterfly Zerene cesonia GCF_012273895.1_Zerene_cesonia_1.1 SAMN13981747 PRJNA587792 2020-10-02
122 domestic silkworm (refseq 2020) Bombyx mori GCF_014905235.1_Bmori_2016v1.0 SAMD00054089 PRJDB4947 2020-10-13
123 dun-bar pinion Cosmia trapezina GCA_905163495.1_ilCosTrap1.1 SAMEA7519851 PRJEB42026 2021-01-28
124 dusky thorn Ennomos fuscantarius GCA_905220475.1_ilEnnFusc2.1 SAMEA7520185 PRJEB42882 2021-02-16
125 East Asian common octopus Octopus sinensis GCF_006345805.1_ASM634580v1 SAMN11633729 PRJNA541812 2019-06-17
126 eastern oyster Crassostrea virginica GCF_002022765.2_C_virginica-3.0 SAMN06349363 PRJNA376014 2017-09-01
127 emerald ash borer Agrilus planipennis GCF_000699045.2_Apla_2.0 SAMN02439909 PRJNA230921 2018-01-03
128 European hornet Vespa crabro GCF_910589235.1_iyVesCrab1.2 SAMEA7520500 PRJEB45335 2022-02-09
129 European house dust mite Dermatophagoides pteronyssinus GCF_001901225.1_ASM190122v2 SAMN06062376 PRJNA353927 2017-06-21
130 European paper wasp Polistes dominula GCF_001465965.1_Pdom_r1.2 SAMN02584905 PRJNA234105 2015-12-14
131 European peacock Nymphalis io GCA_905147045.1_ilAglIoxx1.1 SAMEA7523149 PRJEB41894 2021-01-28
132 eye worm Loa loa GCF_000183805.2_Loa_loa_V3.1 SAMN00103043 PRJNA37757 2012-07-06
133 fall armyworm (Faw-zju v1.1 refseq 2020) Spodoptera frugiperda GCF_011064685.2_ZJU_Sfru_1.1 SAMN13324450 PRJNA590312 2020-03-05
134 flatworm E.granulosus Echinococcus granulosus GCF_000524195.1_ASM52419v1 SAMN01914755 PRJEB121 2014-01-28
135 flatworm S.haematobium Schistosoma haematobium GCF_000699445.2_SchHae_2.0 SAMN11431408 PRJNA78265 2020-01-28
136 flatworm S.mansoni Schistosoma mansoni GCF_000237925.1_ASM23792v2 SAMEA2272516 PRJEA36577 2011-12-13
137 fleshy prawn (Huanghai No. 1 2021) Penaeus chinensis GCF_019202785.1_ASM1920278v2 SAMN17293200 PRJNA691453 2021-07-13
138 flies (14030-0811.24 2021) Drosophila willistoni GCF_018902025.1_UCI_dwil_1.1 SAMN16513131 PRJNA670571 2021-06-16
139 Florida carpenter ant Camponotus floridanus GCF_003227725.1_Cflo_v7.5 SAMN08810141 PRJNA445978 2018-06-14
140 Florida lancelet Branchiostoma floridae GCF_000003815.2_Bfl_VNyyK SAMN02953694 PRJNA20249 2020-04-29
141 fly B.coprophila Bradysia coprophila GCF_014529535.1_BU_Bcop_v1 SAMN12533751 PRJNA291918 2020-09-11
142 fly B.latifrons Bactrocera latifrons GCF_001853355.1_ASM185335v1 SAMN05727007 PRJNA338810 2016-10-25
143 fly D.albomicans Drosophila albomicans GCF_009650485.1_drosAlbom15112-1751.03v1 SAMN12703415 PRJNA554139 2019-11-14
144 fly D.ananassae (14024-0371.13 U. Maryland 2021) Drosophila ananassae GCF_017639315.1_ASM1763931v2 SAMN13901672 PRJNA602597 2021-07-16
145 fly D.ananassae (14024-0371.16-18 U. Chicago 2018) Drosophila ananassae GCF_003285975.2_DanaRS2.1 SAMN09383008 PRJNA475270 2018-10-23
146 fly D.arizonae Drosophila arizonae GCF_001654025.1_ASM165402v1 SAMN04440796 PRJNA309836 2016-05-09
147 fly D.biarmipes (BCM 2013) Drosophila biarmipes GCF_000233415.1_Dbia_2.0 SAMN00714466 PRJNA62307 2013-03-04
148 fly D.biarmipes (Stanford 2021) Drosophila biarmipes GCF_018148935.1_ASM1814893v1 SAMN16729608 PRJNA675888 2021-04-28
149 fly D.bipectinata (BCM 2013) Drosophila bipectinata GCF_000236285.1_Dbip_2.0 SAMN00714473 PRJNA62313 2013-03-04
150 fly D.bipectinata (Stanford 2021) Drosophila bipectinata GCF_018153845.1_ASM1815384v1 SAMN16729609 PRJNA675888 2021-04-28
151 fly D.busckii Drosophila busckii GCF_011750605.1_ASM1175060v1 SAMN13899428 PRJNA450810 2020-03-26
152 fly D.elegans (Baylor 2013) Drosophila elegans GCF_000224195.1_Dele_2.0 SAMN00715014 PRJNA62315 2013-03-04
153 fly D.elegans (Stanford 2021) Drosophila elegans GCF_018152505.1_ASM1815250v1 SAMN16729630 PRJNA675888 2021-04-28
154 fly D.erecta Drosophila erecta GCF_003286155.1_DereRS2 SAMN09383010 PRJNA475270 2018-10-23
155 fly D.eugracilis (modENCODE 2013) Drosophila eugracilis GCF_000236325.1_Deug_2.0 SAMN00715289 PRJNA67709 2013-03-04
156 fly D.eugracilis (Stanford 2021) Drosophila eugracilis GCF_018153835.1_ASM1815383v1 SAMN16729698 PRJNA675888 2021-04-28
157 fly D.ficusphila (BCM 2013) Drosophila ficusphila GCF_000220665.1_Dfic_2.0 SAMN00715126 PRJNA62317 2013-03-04
158 fly D.ficusphila (Stanford 2021) Drosophila ficusphila GCF_018152265.1_ASM1815226v1 SAMN16729631 PRJNA675888 2021-04-28
159 fly D.grimshawi (Agencourt 2006) Drosophila grimshawi GCF_000005155.2_dgri_caf1 SAMN02953650 PRJNA12678 2006-06-30
160 fly D.grimshawi (Stanford 2021) Drosophila grimshawi GCF_018153295.1_ASM1815329v1 SAMN16729613 PRJNA675888 2021-04-28
161 fly D.guanche Drosophila guanche GCF_900245975.1_DGUA_6 SAMEA104164776 PRJEB21790 2018-09-20
162 fly D.hydei Drosophila hydei GCF_003285905.1_DhydRS2 SAMN09383128 PRJNA475270 2019-05-29
163 fly D.innubila Drosophila innubila GCF_004354385.1_UK_Dinn_1.0 SAMN11037163 PRJNA524688 2019-03-19
164 fly D.kikkawai (Baylor 2013) Drosophila kikkawai GCF_000224215.1_Dkik_2.0 SAMN00715127 PRJNA62319 2013-03-04
165 fly D.kikkawai (Stanford 2021) Drosophila kikkawai GCF_018152535.1_ASM1815253v1 SAMN16729629 PRJNA675888 2021-04-28
166 fly D.mauritiana Drosophila mauritiana GCF_004382145.1_ASM438214v1 SAMN06827991 PRJNA383250 2019-04-16
167 fly D.melanogaster Drosophila melanogaster GCF_000001215.4_Release_6_plus_ISO1_MT SAMN02803731 PRJNA13812 2014-08-01
168 fly D.miranda Drosophila miranda GCF_003369915.1_D.miranda_PacBio2.1 SAMN09375764 PRJNA474939 2019-09-23
169 fly D.mojavensis (Agencourt 2006) Drosophila mojavensis GCF_000005175.2_dmoj_caf1 SAMN02953651 PRJNA12682 2006-06-30
170 fly D.mojavensis (Stanford 2021) Drosophila mojavensis GCF_018153725.1_ASM1815372v1 SAMN16729700 PRJNA675888 2021-04-28
171 fly D.navojoa Drosophila navojoa GCF_001654015.2_UFRJ_Dnav_4.2 SAMN04440794 PRJNA309833 2019-03-18
172 fly D.novamexicana Drosophila novamexicana GCF_003285875.2_DnovRS2.1 SAMN09383009 PRJNA475270 2018-10-23
173 fly D.obscura (Stanford 2021) Drosophila obscura GCF_018151105.1_ASM1815110v1 SAMN16729671 PRJNA675888 2021-04-28
174 fly D.obscura 14011-0151.01 Drosophila obscura GCF_002217835.1_Dobs_1.0 SAMD00047210 PRJDB4578 2017-07-01
175 fly D.persimilis Drosophila persimilis GCF_003286085.1_DperRS2 SAMN09383163 PRJNA475270 2018-10-23
176 fly D.pseudoobscura Drosophila pseudoobscura GCF_009870125.1_UCI_Dpse_MV25 SAMN13616452 PRJNA596268 2020-03-03
177 fly D.rhopaloa (modENCODE 2013) Drosophila rhopaloa GCF_000236305.1_Drho_2.0 SAMN00715129 PRJNA67665 2013-02-22
178 fly D.rhopaloa (Stanford 2021) Drosophila rhopaloa GCF_018152115.1_ASM1815211v1 SAMN16729633 PRJNA675888 2021-04-28
179 fly D.santomea (v1.1 2021) Drosophila santomea GCF_016746245.2_Prin_Dsan_1.1 SAMN15573959 PRJNA647033 2021-07-30
180 fly D.sechellia (sech25 v2 2019 UC Irvine) Drosophila sechellia GCF_004382195.2_ASM438219v2 SAMN06827992 PRJNA383250 2019-04-16
181 fly D.serrata Drosophila serrata GCF_002093755.1_Dser1.0 SAMN06092698 PRJNA355616 2017-04-14
182 fly D.simulans (w501 v3.1 2021) Drosophila simulans GCF_016746395.2_Prin_Dsim_3.1 SAMN06473875 PRJNA377886 2021-10-05
183 fly D.subobscura Drosophila subobscura GCF_008121235.1_UCBerk_Dsub_1.0 SAMN11963385 PRJNA545704 2019-08-28
184 fly D.subpulchrella Drosophila subpulchrella GCF_014743375.2_RU_Dsub_v1.1 SAMN15820779 PRJNA557422 2020-10-02
185 fly D.suzukii Drosophila suzukii GCF_013340165.1_LBDM_Dsuz_2.1.pri SAMN13521054 PRJNA594550 2020-06-15
186 fly D.takahashii (BCM 2013) Drosophila takahashii GCF_000224235.1_Dtak_2.0 SAMN00715130 PRJNA62321 2013-03-04
187 fly D.takahashii (Stanford 2021) Drosophila takahashii GCF_018152695.1_ASM1815269v1 SAMN16729628 PRJNA675888 2021-04-28
188 fly D.teissieri Drosophila teissieri GCF_016746235.2_Prin_Dtei_1.1 SAMN15594708 PRJNA647698 2021-08-03
189 fly D.virilis Drosophila virilis GCF_003285735.1_DvirRS2 SAMN09383168 PRJNA475270 2018-10-23
190 fly D.virilis (160 2020) Drosophila virilis GCA_007989325.2_ASM798932v2 SAMN12237241 PRJNA553533 2020-02-04
191 fly D.willistoni Drosophila willistoni GCF_000005925.1_dwil_caf1 SAMN02953653 PRJNA12664 2006-08-03
192 fly D.yakuba (v2 2021) Drosophila yakuba GCF_016746365.2_Prin_Dyak_Tai18E2_2.1 SAMN15573791 PRJNA647028 2021-07-30
193 fly H.illucens Hermetia illucens GCF_905115235.1_iHerIll2.2.curated.20191125 SAMEA6847289 PRJEB37575 2020-11-21
194 fly S.lebanonensis Scaptodrosophila lebanonensis GCF_003285725.1_SlebRS2 SAMN09383169 PRJNA475270 2019-05-29
195 fly T.dalmanni Teleopsis dalmanni GCF_002237135.1_ASM223713v2 SAMN07271145 PRJNA391339 2020-11-06
196 gastropods G.aegis Gigantopelta aegis GCF_016097555.1_Gae_host_genome SAMN16968444 PRJNA612619 2020-12-17
197 gastropods P.canaliculata Pomacea canaliculata GCF_003073045.1_ASM307304v1 SAMN08443704 PRJNA427478 2018-05-11
198 giant honeybee Apis dorsata GCF_000469605.1_Apis_dorsata_1.3 SAMN02954476 PRJNA174631 2013-09-24
199 Glanville fritillary (refseq 2021) Melitaea cinxia GCF_905220565.1_ilMelCinx1.1 SAMN01932438 PRJEB42891 2021-02-16
200 glassy-winged sharpshooter (AUS2020 2022) Homalodisca vitripennis GCF_021130785.1_UT_GWSS_2.1 SAMN22783162 PRJNA776266 2022-01-26
201 greater wax moth Galleria mellonella GCF_003640425.2_ASM364042v2 SAMN10148411 PRJNA494147 2019-11-06
202 green peach aphid Myzus persicae GCF_001856785.1_MPER_G0061.0 SAMN04909046 PRJNA319804 2016-09-19
203 green sea urchin Lytechinus variegatus GCF_018143015.1_Lvar_3.0 SAMN15823010 PRJNA657258 2021-04-29
204 green-underside blue Glaucopsyche alexis GCA_905404095.1_ilGlaAlex1.1 SAMEA7524616 PRJEB43992 2021-04-15
205 H.dujardini (Z151 2017 tardigrades) Hypsibius dujardini GCA_002082055.1_nHd_3.1 SAMN06212344 PRJNA360553 2017-04-07
206 hemichordates S.kowalevskii Saccoglossus kowalevskii GCF_000003605.2_Skow_1.1 SAMN00102747 PRJNA12887 2009-09-09
207 high brown fritillary Fabriciana adippe GCA_905404265.1_ilFabAdip1.1 SAMEA7523308 PRJEB43990 2021-04-15
208 Himalayan honeybee Apis laboriosa GCF_014066325.1_ASM1406632v1 SAMN15599769 PRJNA647849 2020-08-05
209 holly blue Celastrina argiolus GCA_905187575.1_ilCelArgi3.1 SAMEA7523268 PRJEB41907 2021-02-02
210 honey bee Apis mellifera GCF_003254395.2_Amel_HAv3.1 SAMN09259743 PRJNA471592 2018-09-10
211 honeybee mite Varroa destructor GCF_002443255.1_Vdes_3.0 SAMD00093521 PRJDB6279 2017-09-27
212 horned gall aphid (SC2021 2021) Schlechtendalia chinensis GCA_019022885.1_Schi1.0 SAMN17839241 PRJNA700780 2021-06-24
213 house fly Musca domestica GCF_000371365.1_Musca_domestica-2.0.2 SAMN02953849 PRJNA176013 2013-04-22
214 human body louse Pediculus humanus corporis GCF_000006295.1_JCVI_LOUSE_1.0 SAMN02953682 PRJNA16223 2007-04-23
215 hydrozoans H.vulgaris Hydra vulgaris GCF_000004095.1_Hydra_RP_1.0 SAMN00000081 PRJNA12876 2009-10-30
216 hymenopterans (iyDipSimi1 2021) Diprion similis GCF_021155765.1_iyDipSimi1.1 SAMN23497078 PRJNA784632 2021-12-10
217 hymenopterans (iyNeoFabr1 2021) Neodiprion fabricii GCF_021155785.1_iyNeoFabr1.1 SAMN23497077 PRJNA784631 2021-12-10
218 hymenopterans (iyNeoVirg1 2022) Neodiprion virginiana GCF_021901495.1_iyNeoVirg1.1 SAMN23497075 PRJNA784629 2022-02-03
219 hymenopterans O.abietinus Orussus abietinus GCF_000612105.2_Oabi_2.0 SAMN02225314 PRJNA171756 2017-12-15
220 insects Chrysoperla carnea GCF_905475395.1_inChrCarn1.1 SAMEA7520372 PRJEB44056 2021-04-15
221 Jerdon's jumping ant Harpegnathos saltator GCF_003227715.1_Hsal_v8.5 SAMN08810140 PRJNA445978 2018-06-14
222 jewel wasp Nasonia vitripennis GCF_009193385.2_Nvit_psr_1.1 SAMN12877551 PRJNA575073 2020-01-30
223 julia butterfly Dryas iulia moderata GCA_019049465.1_Diul.assembly.v1.1 SAMN19308684 PRJNA691346 2021-06-29
224 large cabbage white (refseq 2021) Pieris brassicae GCF_905147105.1_ilPieBrab1.1 SAMEA7532735 PRJEB41887 2021-01-28
225 large yellow underwing Noctua pronuba GCA_905220335.1_ilNocPron1.1 SAMEA7519837 PRJEB42860 2021-02-16
226 Leishmania braziliensis (MHOM/BR/75/M2903 2016 kinetoplastids) Leishmania braziliensis MHOM/BR/75/M2903 GCA_000340355.2_Leishmania_braziliensis_M2903-1.0.6 SAMN04576869 PRJNA165955 2016-09-30
227 Leishmania braziliensis (MHOM/BR/75/M2904 2011 kinetoplastids) Leishmania braziliensis MHOM/BR/75/M2904 GCF_000002845.2_ASM284v2 SAMEA2272271 PRJEA18663 2011-11-07
228 Leishmania donovani (BPK282A1 2011 kinetoplastids) Leishmania donovani GCF_000227135.1_ASM22713v2 SAMEA2271930 PRJEA61817 2011-12-13
229 Leishmania infantum (JPCM5 2011 kinetoplastids) Leishmania infantum JPCM5 GCF_000002875.2_ASM287v2 SAMEA3138175 PRJNA12658 2011-11-08
230 Leishmania major (Friedlin 2011 kinetoplastids) Leishmania major strain Friedlin GCF_000002725.2_ASM272v2 SAMEA3138173 PRJNA10724 2011-02-14
231 Leishmania mexicana (MHOM/GT/2001/U1103 2011 kinetoplastids) Leishmania mexicana MHOM/GT/2001/U1103 GCF_000234665.1_ASM23466v4 SAMEA2272796 PRJEA60403 2011-11-08
232 Leishmania panamensis (MHOM/PA/94/PSC-1 2014 kinetoplastids) Leishmania panamensis GCF_000755165.1_ASM75516v1 SAMN02991529 PRJNA235344 2014-09-16
233 Leptomonas pyrrhocoris (H10 2015 kinetoplastids) Leptomonas pyrrhocoris GCF_001293395.1_ASM129339v1 SAMN03702862 PRJNA284491 2015-09-17
234 little fire ant Wasmannia auropunctata GCF_000956235.1_wasmannia.A_1.0 SAMD00024919 PRJDB3443 2015-03-17
235 little honeybee Apis florea GCF_000184785.3_Aflo_1.1 SAMN00009081 PRJNA45871 2012-12-07
236 masson pine moth Dendrolimus punctatus GCA_012273795.1_ASM1227379v1 SAMN13088937 PRJNA578599 2020-04-13
237 meadow brown (refseq 2021) Maniola jurtina GCF_905333055.1_ilManJurt1.1 SAMEA7523158 PRJEB43489 2021-03-19
238 Mediterranean fruit fly Ceratitis capitata GCF_000347755.3_Ccap_2.1 SAMN02953830 PRJNA168120 2017-11-06
239 melon fly Zeugodacus cucurbitae GCF_000806345.1_ASM80634v1 SAMN03083541 PRJNA259565 2014-12-23
240 mite V.jacobsoni Varroa jacobsoni GCF_002532875.1_vjacob_1.0 SAMN07256664 PRJNA391052 2017-10-10
241 monarch butterfly Danaus plexippus plexippus GCF_009731565.1_Dplex_v4 SAMN01758044 PRJNA564985 2019-12-11
242 mosquito A.albimanus Anopheles albimanus GCF_013758885.1_VT_AalbS3_pri_1.0 SAMN14582895 PRJNA622927 2020-08-06
243 mosquito A.arabiensis Anopheles arabiensis GCF_016920715.1_AaraD3 SAMN14999448 PRJNA634549 2021-03-10
244 mosquito A.coluzzi Anopheles coluzzii GCF_016920705.1_AcolMOP1 SAMN14999449 PRJNA634549 2021-03-10
245 mosquito A.merus MAF Anopheles merus GCF_017562075.2_AmerM5.1 SAMN14825642 PRJNA660041 2021-03-24
246 moth A.aceris Acronicta aceris GCA_910591435.1_ilAcrAcer1.1 SAMEA7701532 PRJEB45450 2021-07-06
247 moth A.berbera Amphipyra berbera GCA_910594945.1_ilAmpBerb1.1 SAMEA7701493 PRJEB45915 2021-07-07
248 moth A.centrago Atethmia centrago GCA_905333075.2_ilAteCent1.2 SAMEA7520177 PRJEB43486 2021-03-26
249 moth A.pulchrina Autographa pulchrina GCA_905475315.1_ilAutPulc1.1 SAMEA7520527 PRJEB44048 2021-04-15
250 moth A.tragopoginis Amphipyra tragopoginis GCA_905220435.1_ilAmpTrag2.1 SAMEA7520175 PRJEB42877 2021-02-16
251 moth A.transitella Amyelois transitella GCF_001186105.1_ASM118610v1 SAMN03009087 PRJNA254820 2015-07-22
252 moth A.tripartita Abrostola tripartita GCA_905340225.1_ilAbrTrip1.1 SAMEA7520667 PRJEB43728 2021-03-25
253 moth A.turbidana Apotomis turbidana GCA_905147355.1_ilApoTurb1.1 SAMEA7520681 PRJEB41899 2021-01-28
254 moth B.adustella Blastobasis adustella GCA_907269095.1_ilBlaAdus2.1 SAMEA7520179 PRJEB44953 2021-05-19
255 moth B.lacticolella Blastobasis lacticolella GCA_905147135.1_ilBlaLact1.1 SAMEA7519826 PRJEB41904 2021-01-28
256 moth C.culmella Chrysoteuchia culmella GCA_910589605.1_ilChrCulm1.1 SAMEA7701502 PRJEB45323 2021-07-07
257 moth C.curtula Clostera curtula GCA_905475355.1_ilCloCurt1.1 SAMEA7520526 PRJEB43986 2021-04-07
258 moth C.elinguaria Crocallis elinguaria GCA_907269065.1_ilCroElin1.1 SAMEA7701527 PRJEB44955 2021-05-19
259 moth C.exigua Marasmia exigua GCA_019059595.1_ASM1905959v1 SAMN16434404 PRJNA669107 2021-06-29
260 moth C.ligustri Craniophora ligustri GCA_905163465.1_ilCraLigu1.1 SAMEA7519852 PRJEB42029 2021-01-27
261 moth C.quercana Carcina quercana GCA_910589575.1_ilCarQuer1.1 SAMEA7519850 PRJEB45321 2021-07-07
262 moth C.sasakii Carposina sasakii GCA_014607495.2_ASM1460749v2 SAMN14693731 PRJNA627116 2020-09-16
263 moth C.splendana Cydia splendana GCA_910591565.1_ilCydSple1.1 SAMEA7701547 PRJEB45453 2021-07-07
264 moth D.porcellus Deilephila porcellus GCA_905220455.1_ilDeiPorc1.1 SAMEA7520522 PRJEB42881 2021-02-16
265 moth E.flammealis Endotricha flammealis GCA_905163395.1_ilEndFlam1.1 SAMEA7519855 PRJEB42005 2021-01-28
266 moth E.grisescens Ectropis grisescens GCA_017562165.1_ASM1756216v1 SAMN15962381 PRJNA660825 2021-03-24
267 moth E.quercinarius Ennomos quercinarius GCA_910589525.1_ilEnnQuei1.1 SAMEA7701560 PRJEB45324 2021-07-07
268 moth E.similis Euproctis similis GCA_905147225.1_ilEupSimi1.1 SAMEA7519909 PRJEB41916 2021-01-28
269 moth E.tages Erynnis tages GCA_905147235.1_ilEryTage1.1 SAMEA7523299 PRJEB41912 2021-01-28
270 moth H.dysodea Hecatera dysodea GCA_905332915.1_ilHecDyso1.1 SAMEA7521514 PRJEB43487 2021-03-19
271 moth H.fasciaria Hylaea fasciaria GCA_905147375.1_ilHylFasc1.1 SAMEA7520684 PRJEB41918 2021-01-28
272 moth H.fuciformis Hemaris fuciformis GCA_907164795.1_iHemFuc1.1 SAMEA5248724 PRJEB44424 2021-05-17
273 moth H.kahamanoa Hyposmocoma kahamanoa GCF_003589595.1_ASM358959v1 SAMN09932754 PRJNA488386 2018-09-21
274 moth H.proboscidalis Hypena proboscidalis GCA_905147285.1_ilHypProb1.1 SAMEA7520188 PRJEB41920 2021-01-28
275 moth H.pyritoides Habrosyne pyritoides GCA_907165245.1_ilHabPyri1.1 SAMEA7701298 PRJEB44631 2021-05-17
276 moth H.salicella Hedya salicella GCA_905404275.1_ilHedSali1.1 SAMEA7520688 PRJEB43994 2021-04-15
277 moth L.flexula Laspeyria flexula GCA_905147015.1_ilLasFlex1.1 SAMEA7519836 PRJEB41886 2021-01-28
278 moth L.populi Laothoe populi GCA_905220505.1_ilLaoPopu1.1 SAMEA7520519 PRJEB42885 2021-02-16
279 moth M.ferrago Mythimna ferrago GCA_910589285.1_ilMytFerr1.1 SAMEA7701536 PRJEB45327 2021-07-07
280 moth M.impura Mythimna impura GCA_905147345.1_ilMytImpu1.1 SAMEA7519913 PRJEB41924 2021-01-28
281 moth M.tiliae Mimas tiliae GCA_905332985.1_ilMimTili1.1 SAMEA7520521 PRJEB43491 2021-03-11
282 moth N.dromedarius Notodonta dromedarius GCA_905147325.1_ilNotDrom1.1 SAMEA7520190 PRJEB41926 2021-01-28
283 moth N.fimbriata Noctua fimbriata GCA_905163415.1_ilNocFimb1.1 SAMEA7519914 PRJEB42035 2021-01-28
284 moth N.janthe Noctua janthe GCA_910589295.1_ilNocJant1.1 SAMEA7701537 PRJEB45329 2021-07-07
285 moth N.uddmanniana Notocelia uddmanniana GCA_905163555.1_ilNotUddm1.1 SAMEA7519916 PRJEB42037 2021-01-28
286 moth O.plecta Ochropleura plecta GCA_905475445.1_ilOchPlec1.1 SAMEA7520524 PRJEB44051 2021-04-15
287 moth O.sylvanus Ochlodes sylvanus GCA_905404295.1_ilOchSylv3.1 SAMEA7523138 PRJEB44002 2021-04-15
288 moth P.bucephala Phalera bucephala GCA_905147815.2_ilPhaBuce1.2 SAMEA7519921 PRJEB41948 2021-08-16
289 moth P.meticulosa Phlogophora meticulosa GCA_905147745.1_ilPhlMeti2.1 SAMEA7520192 PRJEB41949 2021-01-28
290 moth P.stratiotata Parapoynx stratiotata GCA_910589355.1_ilParStra1.1 SAMEA7519920 PRJEB45330 2021-07-07
291 moth P.tremula Pheosia tremula GCA_905333125.1_ilPheTrem1.1 SAMEA7520523 PRJEB43493 2021-03-19
292 moth S.litura (Ishihara v3 2017) Spodoptera litura GCF_002706865.2_ASM270686v3 SAMN05845584 PRJNA344815 2017-10-25
293 moth S.lubricipeda Spilosoma lubricipeda GCA_905220595.1_ilSpiLubr1.1 SAMEA7520525 PRJEB42894 2021-02-16
294 moth T.batis Thyatira batis GCA_905147785.1_ilThyBati1.1 SAMEA7519923 PRJEB41953 2021-01-28
295 moth T.semifulvella Tinea semifulvella GCA_910589645.1_ilTinSemi1.1 SAMEA7520371 PRJEB45332 2021-07-06
296 moth T.trinotella Tinea trinotella GCA_905220615.1_ilTinTrin1.1 SAMEA7519924 PRJEB42896 2021-02-16
297 moth X.xanthographa Xestia xanthographa GCA_905147715.2_ilXesXant1.2 SAMEA7520195 PRJEB41957 2021-10-15
298 moth Y.scabrella Ypsolopha scabrella GCA_910592155.1_ilYpsScab1.1 SAMEA7701504 PRJEB45691 2021-07-07
299 moth Z.filipendulae Zygaena filipendulae GCA_907165275.1_ilZygFili1.1 SAMEA7519846 PRJEB44634 2021-05-17
300 moth Z.pyrina Zeuzera pyrina GCA_907165235.1_ilZeuPyri1.1 SAMEA7701286 PRJEB44632 2021-05-17
301 moths (SPB_JAAS2020 2022) Leguminivora glycinivorella GCF_023078275.1_LegGlyc_1.1 SAMN21160035 PRJNA759210 2022-04-22
302 mottled umber moth Erannis defoliaria GCA_905404285.1_ilEraDefo1.1 SAMEA7520367 PRJEB43988 2021-04-15
303 mountain pine beetle Dendroctonus ponderosae GCF_000355655.1_DendPond_male_1.0 SAMN01121785 PRJNA162621 2013-04-10
304 nematode C.briggsae (AF16 CB4 2014) Caenorhabditis briggsae GCF_000004555.2_CB4 SAMEA3138181 PRJNA10731 2014-07-02
305 nematode C.inopinata Caenorhabditis inopinata GCA_003052745.1_Sp34_v7 SAMD00080818 PRJDB5687 2017-06-22
306 nematode C.remanei Caenorhabditis remanei GCF_000149515.1_ASM14951v1 SAMN00627085 PRJNA12588 2007-07-19
307 nematode N.americanus Necator americanus GCF_000507365.1_N_americanus_v1 SAMN02953824 PRJNA72135 2013-12-20
308 nematode S.ratti Strongyloides ratti GCF_001040885.1_S_ratti_ED321 SAMEA1682816 PRJEB125 2014-09-18
309 nematode T.spiralis Trichinella spiralis GCF_000181795.1_Trichinella_spiralis-3.7.1 SAMN02953711 PRJNA12603 2011-01-11
310 northern house mosquito Culex pipiens pallens GCF_016801865.1_TS_Cpip_V1 SAMN16414976 PRJNA668557 2021-02-02
311 northern quahog Mercenaria mercenaria GCF_014805675.1_ASM1480567v1.1 SAMN13611631 PRJNA596049 2020-10-02
312 olive fruit fly Bactrocera oleae GCF_001188975.3_MU_Boleae_v2 SAMN03840585 PRJNA288990 2019-04-30
313 orange tip Anthocharis cardamines GCA_905404175.1_ilAntCard3.1 SAMEA7523110 PRJEB43982 2021-04-15
314 orchard mason bee Osmia lignaria GCF_012274295.1_USDA_OLig_1.0 SAMN14365276 PRJNA553797 2020-04-13
315 oriental fruit fly Bactrocera dorsalis GCF_000789215.1_ASM78921v2 SAMN02203716 PRJNA208413 2014-12-03
316 owl limpet Lottia gigantea GCF_000327385.1_Helro1 SAMN02769626 PRJNA175706 2012-12-20
317 Pacific oyster (BGI 05x7-T-G4-1.051 20 2019) Crassostrea gigas GCA_000297895.2_ASM29789v2 SAMN00690713 PRJNA70283 2019-08-08
318 Pacific oyster (Roslin 2020) Crassostrea gigas GCF_902806645.1_cgigas_uk_roslin_v1 SAMEA6259236 PRJEB35351 2020-02-19
319 Pacific white shrimp Penaeus vannamei GCF_003789085.1_ASM378908v1 SAMN08721527 PRJNA438564 2018-11-16
320 painted lady (refseq 2021) Vanessa cardui GCF_905220365.1_ilVanCard2.1 SAMEA7523147 PRJEB42869 2021-02-16
321 Panamanian leafcutter ant Acromyrmex echinatior GCF_000204515.1_Aech_3.9 SAMN02953789 PRJNA62733 2011-05-03
322 Paramecium tetraurelia (d4-2 2017) Paramecium tetraurelia strain d4-2 GCF_000165425.1_ASM16542v1 SAMEA3138302 PRJNA18363 2007-02-02
323 pea aphid (AL4f v2 2019) Acyrthosiphon pisum GCF_005508785.2_pea_aphid_22Mar2018_4r6ur_v2 SAMN10253041 PRJNA496478 2019-05-20
324 pepper-and-salt moth Biston betularia GCA_905404145.1_ilBisBetu1.1 SAMEA7520512 PRJEB43984 2021-04-15
325 pharaoh ant Monomorium pharaonis GCF_013373865.1_ASM1337386v2 SAMN15097795 PRJNA634441 2020-08-14
326 pinion-streaked snout moth Schrankia costaestrigalis GCA_905475405.1_ilSchCost1.1 SAMEA7520193 PRJEB44055 2021-04-15
327 placozoans T.adhaerens Trichoplax adhaerens GCF_000150275.1_v1.0 SAMN02953699 PRJNA12874 2008-06-17
328 priapulids P.caudatus Priapulus caudatus GCF_000485595.1_Priapulus_caudatus-5.0.1 SAMN02953874 PRJNA20497 2015-11-19
329 purple sea urchin Strongylocentrotus purpuratus GCF_000002235.5_Spur_5.0 SAMN00829422 PRJNA10736 2019-09-06
330 Queensland fruit fly Bactrocera tryoni GCF_016617805.1_CSIRO_BtryS06_freeze2 SAMN12586630 PRJNA560467 2021-01-19
331 R.varieornatus (YOKOZUNA-1 2016 tardigrades) Ramazzottius varieornatus GCA_001949185.1_Rvar_4.0 SAMD00054187 PRJDB4588 2016-11-09
332 red abalone (Redab-CP-2226-F 2018) Haliotis rufescens GCF_003343065.1_H.ruf_v1.0 SAMN08558906 PRJNA434455 2018-07-26
333 red admiral (refseq 2021) Vanessa atalanta GCF_905147765.1_ilVanAtal1.2 SAMEA7523145 PRJEB41956 2021-09-28
334 red fire ant (2018) Solenopsis invicta GCF_000188075.2_Si_gnH SAMN02953778 PRJNA49629 2018-08-01
335 red fire ant (2021) Solenopsis invicta GCF_016802725.1_UNIL_Sinv_3.0 SAMN17294113 PRJNA691522 2021-02-03
336 red flour beetle Tribolium castaneum GCF_000002335.3_Tcas5.2 SAMN02953634 PRJNA12540 2016-03-10
337 red harvester ant Pogonomyrmex barbatus GCF_000187915.1_Pbar_UMD_V03 SAMN02953770 PRJNA45797 2011-02-04
338 red mason bee (2021) Osmia bicornis bicornis GCF_907164935.1_iOsmBic2.1 SAMEA5248723 PRJEB44455 2021-05-17
339 red paper wasp Polistes canadensis GCF_001313835.1_ASM131383v1 SAMN02869711 PRJNA253269 2015-10-13
340 red swamp crayfish (Jiangsu 2021) Procambarus clarkii GCF_020424385.1_ASM2042438v2 SAMN19018814 PRJNA727411 2021-10-12
341 redheaded pine sawfly Neodiprion lecontei GCF_001263575.1_Nlec1.0 SAMN03462046 PRJNA280451 2015-08-10
342 redheaded pine sawfly (iyNeoLeco1 2022) Neodiprion lecontei GCF_021901455.1_iyNeoLeco1.1 SAMN23497074 PRJNA784628 2022-02-03
343 Riband wave Idaea aversata GCA_907269075.1_ilIdaAver1.1 SAMEA7519834 PRJEB44947 2021-05-19
344 rice weevil Sitophilus oryzae GCF_002938485.1_Soryzae_2.0 SAMN08382431 PRJNA431034 2019-09-09
345 ringlet Maniola hyperantus GCF_902806685.1_iAphHyp1.1 SAMEA994723 PRJEB36756 2020-02-22
346 roundworm Caenorhabditis elegans GCF_000002985.6_WBcel235 n/a PRJNA13758 2013-02-07
347 Russian wheat aphid Diuraphis noxia GCF_001186385.1_Dnoxia_1.0 SAMN02693874 PRJNA233413 2015-07-23
348 salmon louse (v1.2 2020) Lepeophtheirus salmonis GCF_016086655.3_UVic_Lsal_1.2 SAMN16628719 PRJNA673901 2020-12-16
349 sea anemones Exaiptasia pallida GCF_001417965.1_Aiptasia_genome_1.1 SAMN03839803 PRJNA261862 2015-10-28
350 segmented worms Helobdella robusta GCF_000326865.1_Helobdella_robusta_v1.0 SAMN02769625 PRJNA175704 2012-12-20
351 seven-spotted ladybird Coccinella septempunctata GCF_907165205.1_icCocSept1.1 SAMEA7520205 PRJEB44629 2021-05-17
352 silver meadow fritillary Boloria selene GCA_905231865.2_ilBolSele5.2 SAMEA7523131 PRJEB43009 2021-03-24
353 silver Y moth Autographa gamma GCA_905146925.1_ilAutGamm1.1 SAMEA7519848 PRJEB41840 2021-01-28
354 six-belted clearwing Bembecia ichneumoniformis GCA_910589475.1_ilBemIchn1.1 SAMEA7701282 PRJEB45319 2021-07-07
355 small hive beetle Aethina tumida GCF_001937115.1_Atum_1.0 SAMN06036204 PRJNA256171 2017-01-05
356 small tortoiseshell Nymphalis urticae GCA_905147175.1_ilAglUrti1.1 SAMEA7523286 PRJEB41896 2021-01-28
357 snowberry fruit fly (East Lansing v1.1 2016) Rhagoletis zephyria GCF_001687245.2_Rhagoletis_zephyria_1.1 SAMN04977950 PRJNA321204 2016-07-19
358 soft corals D.gigantea (DGI-Jeju-01 2019) Dendronephthya gigantea GCF_004324835.1_DenGig_1.0 SAMN10516674 PRJNA507923 2019-03-04
359 soft corals Xenia (Carnegie-2017 2022) Xenia sp. Carnegie-2017 GCF_021976095.1_XeniaSp_v1 SAMN23741995 PRJNA548325 2022-02-04
360 Southeast Asian liver fluke Opisthorchis viverrini GCF_000715545.1_OpiViv1.0 SAMN00996407 PRJNA222628 2014-07-09
361 southern cattle tick Rhipicephalus microplus GCF_013339725.1_ASM1333972v1 SAMN14941061 PRJNA633311 2020-06-16
362 southern house mosquito Culex quinquefasciatus GCF_015732765.1_VPISU_Cqui_1.0_pri_paternal SAMN15480861 PRJNA644878 2020-12-04
363 speckled wood butterfly (refseq 2021) Pararge aegeria GCF_905163445.1_ilParAegt1.1 SAMEA7532732 PRJEB42039 2021-01-28
364 spiders S.dumicola Stegodyphus dumicola GCF_010614865.1_ASM1061486v1 SAMN13619660 PRJNA510316 2020-02-14
365 sponges A.queenslandica Amphimedon queenslandica GCF_000090795.1_v1.0 SAMN02743868 PRJNA39517 2010-05-28
366 springtails F.candida Folsomia candida GCF_002217175.1_ASM221717v1 SAMN04196550 PRJNA299291 2017-07-12
367 squinting bush brown Bicyclus anynana GCF_900239965.1_Bicyclus_anynana_v1.2 SAMEA3639938 PRJEB8426 2018-01-02
368 stable fly Stomoxys calcitrans GCF_001015335.1_Stomoxys_calcitrans-1.0.1 SAMN03486548 PRJNA188117 2015-05-31
369 stalked seq squirt Styela clava GCF_013122585.1_ASM1312258v2 SAMN10977492 PRJNA523448 2021-02-02
370 starlet sea anemone Nematostella vectensis GCF_000209225.1_ASM20922v1 SAMN02953687 PRJNA12581 2007-08-22
371 stony coral A.digitifera Acropora digitifera GCF_000222465.1_Adig_1.1 SAMD00004206 PRJDA67425 2016-01-15
372 stony coral A.millepora (JS-1 2020) Acropora millepora GCF_013753865.1_Amil_v2.1 SAMN14973899 PRJNA633778 2020-07-29
373 stony coral A.millepora (SF001 2019) Acropora millepora GCF_004143615.1_amil_sf_1.1 SAMN09287627 PRJNA473876 2019-02-06
374 stony coral O.faveolata Orbicella faveolata GCF_002042975.1_ofav_dov_v1 SAMN06562666 PRJNA378841 2017-03-20
375 stony coral P.damicornis Pocillopora damicornis GCF_003704095.1_ASM370409v1 SAMN09007954 PRJNA454489 2018-10-31
376 stony coral S.pistillata Stylophora pistillata GCF_002571385.1_Stylophora_pistillata_v1 SAMN03491624 PRJNA281535 2017-10-17
377 swede midge Contarinia nasturtii GCF_009176525.2_AAFC_CNas_1.1 SAMN12743477 PRJNA565389 2019-10-18
378 sweet potato whitefly Bemisia tabaci GCF_001854935.1_ASM185493v1 SAMN04500967 PRJNA312470 2016-10-26
379 swiftwater hydra (105 2022) Hydra vulgaris GCF_022113875.1_Hydra_105_v3 SAMN18321928 PRJNA703404 2022-02-14
380 swimming crab Portunus trituberculatus GCF_017591435.1_ASM1759143v1 SAMN12306490 PRJNA555262 2021-03-30
381 termite C.secundus Cryptotermes secundus GCF_002891405.2_Csec_1.0 SAMN06690155 PRJNA381866 2018-01-17
382 termite Z.nevadensis Zootermopsis nevadensis GCF_000696155.1_ZooNev1.0 SAMN02146280 PRJNA203242 2014-07-22
383 thrips T.palmi Thrips palmi GCF_012932325.1_TpBJ-2018v1 SAMN14133010 PRJNA607431 2020-04-29
384 tick D.silvarum Dermacentor silvarum GCF_013339745.1_ASM1333974v1 SAMN14941059 PRJNA633311 2020-06-16
385 tobacco hornworm Manduca sexta GCF_014839805.1_JHU_Msex_v1.0 SAMN15881793 PRJNA658700 2020-10-02
386 Trypanosoma brucei brucei (927/4 GUTat10.1 2005 kinetoplastids) Trypanosoma brucei brucei TREU927 GCF_000002445.2_ASM244v1 SAMN02953625 PRJNA11756 2005-12-14
387 Trypanosoma brucei gambiense (Dal972 MHOM/CI/86/DAL972 2009 kinetoplastids) Trypanosoma brucei gambiense DAL972 GCF_000210295.1_ASM21029v1 SAMEA2272188 PRJEA40697 2009-10-14
388 Trypanosoma conorhini (025E 2018 kinetoplastids) Trypanosoma conorhini GCF_003719485.1_ASM371948v1 SAMN04565988 PRJNA315397 2018-11-08
389 Trypanosoma cruzi (CL Brener 2005 kinetoplastids) Trypanosoma cruzi strain CL Brener GCF_000209065.1_ASM20906v1 SAMN02953627 PRJNA11755 2005-08-02
390 Trypanosoma grayi (ANR4 2014 kinetoplastids) Trypanosoma grayi GCF_000691245.1_Tgr_V1 SAMN02726834 PRJNA244495 2014-05-15
391 Trypanosoma rangeli (AM80 2018 kinetoplastids) Trypanosoma rangeli GCF_003719475.1_ASM371947v1 SAMN04566061 PRJNA315397 2018-11-08
392 Trypanosoma theileri (Edinburgh 2017 kinetoplastids) Trypanosoma theileri GCF_002087225.1_Tth_v3 SAMN03296061 PRJNA273795 2017-04-12
393 tsetse fly Glossina fuscipes GCF_014805625.1_Yale_Gfus_2 SAMN13613662 PRJNA596165 2020-09-30
394 two-spotted spider mite Tetranychus urticae GCF_000239435.1_ASM23943v1 SAMEA2272276 PRJEA71041 2011-12-20
395 vase tunicate Ciona intestinalis GCF_000224145.3_KH n/a PRJDA65419 2013-09-17
396 wasp A.gifuensis Aphidius gifuensis GCF_014905175.1_ASM1490517v1 SAMN14446980 PRJNA615161 2020-11-16
397 wasp B.treatae Belonocnema treatae GCF_010883055.1_B_treatae_v1 SAMN13905343 PRJNA602724 2020-02-21
398 wasp C.floridanum Copidosoma floridanum GCF_000648655.2_Cflo_2.0 SAMN02265491 PRJNA171748 2017-12-12
399 wasp C.glomerata (CgM1 2021) Cotesia glomerata GCF_020080835.1_MPM_Cglom_v2.3 SAMN18340714 PRJNA715233 2021-09-24
400 wasp C.insularis Chelonus insularis GCF_013357705.1_ASM1335770v1 SAMN14571904 PRJNA624215 2020-06-17
401 wasp C.solmsi marchali Ceratosolen solmsi marchali GCF_000503995.1_CerSol_1.0 SAMN02953852 PRJNA178998 2013-12-04
402 wasp D.alloeum Diachasma alloeum GCF_001412515.2_Dall2.0 SAMN03701895 PRJNA284396 2019-03-06
403 wasp F.arisanus Fopius arisanus GCF_000806365.1_ASM80636v1 SAMN03083650 PRJNA258104 2014-12-23
404 wasp L.heterotoma Leptopilina heterotoma GCF_015476425.1_ASM1547642v1 SAMN14582825 PRJNA624738 2020-11-15
405 wasp M.demolitor Microplitis demolitor GCF_000572035.2_Mdem2 SAMN02708865 PRJNA195937 2015-10-07
406 wasp T.pretiosum Trichogramma pretiosum GCF_000599845.2_Tpre_2.0 SAMN02439301 PRJNA168121 2017-12-15
407 wasp V.canescens Venturia canescens GCF_019457755.1_ASM1945775v1 SAMN19659032 PRJNA736740 2021-08-09
408 wasp V.velutina Vespa velutina GCF_912470025.1_iVesVel2.1 SAMEA5248726 PRJEB46979 2021-08-14
409 western corn rootworm Diabrotica virgifera virgifera GCF_003013835.1_Dvir_v2.0 SAMN08631342 PRJNA432972 2018-10-15
410 western flower thrips Frankliniella occidentalis GCF_000697945.2_Focc_2.1 SAMN02303501 PRJNA203209 2017-12-15
411 western predatory mite Galendromus occidentalis GCF_000255335.1_Mocc_1.0 SAMN00849407 PRJNA62309 2012-03-27
412 western yellowjacket Vespula pensylvanica GCF_014466175.1_ASM1446617v1 SAMN15507680 PRJNA643352 2020-09-09
413 wheat stem sawfly Cephus cinctus GCF_000341935.1_Ccin1 SAMN02905554 PRJNA168335 2014-07-09
414 white pine sawfly (iyNeoPine1 2021) Neodiprion pinetum GCF_021155775.1_iyNeoPine1.1 SAMN21903850 PRJNA767423 2021-12-10
415 wild silkworm Bombyx mandarina GCF_003987935.1_ASM398793v1 SAMN08782053 PRJNA445374 2018-12-31
416 yellow fever mosquito Aedes aegypti GCF_002204515.2_AaegL5.0 SAMN07177802 PRJNA318737 2017-06-22
417 yellow sugarcane aphid Sipha flava GCF_003268045.1_YSA_version1 SAMN09230380 PRJNA472250 2018-06-26
418 Yesso scallop Mizuhopecten yessoensis GCF_002113885.1_ASM211388v2 SAMN03013375 PRJNA259405 2017-06-12

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 52 assemblies assembly stats track stats
Mammals 301 assemblies assembly stats track stats
Birds 123 assemblies assembly stats track stats
Fishes 142 assemblies assembly stats track stats
other vertebrates 51 assemblies assembly stats track stats
Invertebrates 418 assemblies assembly stats track stats
Plants 154 assemblies assembly stats track stats
Fungi 445 assemblies assembly stats track stats
VGP - Vertebrate Genome Project 233 assemblies assembly stats track stats
legacy/superseded 162 assemblies assembly stats track stats