Legacy Genomes assembly hubs, assembly statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of legacy only.

See also: hub accesstrack statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser
scientific name
and data download
NCBI assembly sequence
count
genome size
nucleotides
gap
count
unknown bases
(gap size sum)
masking
percent
1 aardvark (BS58 2019 Broad) Orycteropus afer GCA_004365145.1_OryAfe_v1_BIUU 2,675,444 4,687,958,587 15,429 1,542,900 59.66
2 African clawed frog (2016) Xenopus laevis GCF_001663975.1_Xenopus_laevis_v2 108,033 2,718,433,805 216,028 309,709,018 35.96
3 African grass rat (paternal X 2020 VGP) Arvicanthis niloticus GCA_011762505.1_mArvNil1.pat.X 1,596 2,496,777,707 1,624 20,289,527 37.17
4 African savanna elephant (2009 genbank) Loxodonta africana GCA_000001905.1_Loxafr3.0 2,352 3,196,738,035 93,514 78,195,493 56.42
5 alkali bee (v1.2 Touchet_males 2018) Nomia melanderi GCF_003710045.1_USU_Nmel_1.2 95,883 325,881,203 14,031 18,226,823 27.52
6 alpaca (2015 BGI) Vicugna pacos huacaya GCA_000767525.1_Vi_pacos_V1.0 52,275 2,013,701,362 23,458 12,540,013 36.21
7 alpaca (v3.1 Carlotta AHFN-0088 2019 Deakin U) Vicugna pacos GCF_000164845.3_VicPac3.1 77,390 2,119,617,549 166,280 88,419,281 34.29
8 Alpine marmot (2015) Marmota marmota marmota GCF_001458135.1_marMar2.1 14,543 2,510,587,379 89,362 98,898,735 31.47
9 American beaver (US014 2019 Broad) Castor canadensis GCA_004027675.1_CasCan_v1_BIUU 832,147 2,761,481,163 5,769 576,900 34.58
10 American bison (2014 genbank) Bison bison bison GCA_000754665.1_Bison_UMD1.0 450,181 2,953,606,000 341,984 195,767,988 44.53
11 American pika 3.0 (2012 Broad genbank) Ochotona princeps GCA_000292845.1_OchPri3.0 10,419 2,229,819,235 122,542 285,847,846 26.73
12 amphipods H.azteca (HAZT.00-mixed v2.0 2016) Hyalella azteca GCF_000764305.1_Hazt_2.0 18,000 550,885,727 23,726 2,638,611 29.03
13 Amur tiger (TaeGuk 2013 genbank) Panthera tigris altaica GCA_000464555.1_PanTig1.0 1,478 2,391,065,193 155,553 58,232,500 41.50
14 Anna's hummingbird (BGI_N300 2019 genbank VGP) Calypte anna GCA_003957555.2_bCalAnn1_v1.p 160 1,059,706,240 429 16,096,788 20.87
15 ant N.fulva (TAMU-Nful-2015 v1.0 2019) Nylanderia fulva GCF_005281655.1_TAMU_Nfulva_1.0 2,869 375,107,333 1,076 1,829,080 43.13
16 ant T.cornetzi (Tcor2-1 v1.0 2016 BGI) Trachymyrmex cornetzi GCF_001594075.1_Tcor1.0 19,761 369,438,293 40,822 30,342,016 34.65
17 Arabian camel (2014 genbank) Camelus dromedarius GCA_000767585.1_PRJNA234474_Ca_dromedarius_V1.0 32,572 2,004,047,047 72,775 22,596,073 34.42
18 Arctic fox (US066 2019 Broad) Vulpes lagopus GCA_004023825.1_VulLag_v1_BIUU 1,263,345 2,688,561,625 9,604 960,400 45.01
19 ascomycetes A.fischeri (v3 NRRL 181 2006) Aspergillus fischeri NRRL 181 GCF_000149645.2_ASM14964v3 376 31,665,876 90 9,000 5.98
20 ass (Maral har 2015 genbank) Equus asinus GCA_001305755.1_ASM130575v1 2,166 2,391,034,547 69,593 33,114,414 41.13
21 Atlantic halibut (2019 genbank VGP) Hippoglossus hippoglossus GCA_009819705.1_fHipHip1.pri 57 596,792,676 290 3,413,390 24.17
22 Atlantic herring (v1) Clupea harengus GCF_900700415.1_Ch_v2.0.2 27 725,686,888 1,963 859,396 32.28
23 Atlantic salmon (genbank 2021) Salmo salar GCA_905237065.2_Ssal_v3.1 4,011 2,756,584,103 211 21,100 59.39
24 B.malayi (v3 2008 agent of lymphatic filariasis) Brugia malayi GCF_000002995.3_ASM299v2 24,286 93,659,149 58,744 6,589,628 33.64
25 Bactrian camel (Alxa 2014 genbank) Camelus bactrianus GCA_000767855.1_Ca_bactrianus_MBC_1.0 35,454 1,992,646,609 31,980 13,666,687 34.66
26 barn owl BGI_N341 (2014) Tyto alba GCF_000687205.1_ASM68720v1 62,122 1,120,143,088 109,223 8,845,233 18.44
27 barn owl (2020) Tyto alba alba GCF_902150015.1_genome_assembly_l500 21,504 1,219,187,741 177,340 9,579,996 19.60
28 basidiomycetes S.commune (v1 H4-8 2010) Schizophyllum commune H4-8 GCF_000143185.1_v1.0 36 38,482,026 316 551,641 11.52
29 beet (2015) Beta vulgaris subsp. vulgaris GCF_000511025.2_RefBeet-1.2.2 40,246 566,550,431 30,962 48,760,827 30.12
30 beluga whale (GAN/ISIS: 26980492/103006 v2 2017) Delphinapterus leucas GCA_002288925.2_ASM228892v2 6,971 2,358,506,062 28,398 31,726,626 43.16
31 black-legged tick (U.Maryland v1 2021) Ixodes scapularis GCF_016920785.1_Ixodes_scapularus_ComboLowHiFi 2,977 2,296,047,215 0 0 43.15
32 black snub-nosed monkey (Rb0 v1 refseq 2016) Rhinopithecus bieti GCF_001698545.1_ASM169854v1 105,031 2,977,074,741 149,843 175,194,759 47.32
33 black snub-nosed monkey (Rb0 v1 genbank 2016) Rhinopithecus bieti GCA_001698545.1_ASM169854v1 105,030 2,977,058,190 149,843 175,194,759 47.65
34 black swan (v1 Queensland, Australia AKBS03 2020) Cygnus atratus GCF_013377495.1_Cygnus_atratus_primary_v1.0 396 1,122,279,392 0 0 21.43
35 blue whale (JJ_BM4_2016_0621 v2 2020 VGP) Balaenoptera musculus GCA_009873245.2_mBalMus1.v2 130 2,380,012,384 936 25,929,252 43.78
36 blunt-snouted clingfish (2019 genbank VGP) Gouania willdenowi GCA_900634775.1_fGouWil2.1 441 937,150,793 1,160 14,353,515 42.93
37 Bolivian squirrel monkey (3227 Broad 2011) Saimiri boliviensis boliviensis GCF_000235385.1_SaiBol1.0 2,686 2,608,588,537 148,728 131,440,969 44.02
38 Bolivian squirrel monkey (100643 v2.0 BCM 2021) Saimiri boliviensis boliviensis GCF_016699345.1_BCM_Sbol_2.0 1,716 2,651,399,628 1,074 11,737,674 47.71
39 brown argus (genbank 2021) Aricia agestis GCA_905147365.1_ilAriAges1.1 26 435,280,672 4 734 48.47
40 brown bear (GAN/ISIS:MIG12 v1 2018) Ursus arctos horribilis GCF_003584765.1_ASM358476v1 6,262 2,327,475,088 17,380 16,213,257 40.61
41 brown dog tick (v1 Rsan-2018 2020) Rhipicephalus sanguineus GCF_013339695.1_ASM1333969v1 2,329 2,365,540,030 10,359 1,036,102 42.80
42 budgerigar (maternal Z 2020 genbank VGP) Melopsittacus undulatus GCA_012275295.1_bMelUnd1.mat.Z 865 1,171,635,651 284 3,236,129 22.13
43 butterfly L.sinapis (2021 genbank) Leptidea sinapis GCA_905404315.1_ilLepSina1.1 50 685,599,024 13 2,302 51.80
44 butterfly P.napi (v1.1 genbank 2021) Pieris napi GCA_905475465.1_ilPieNapi1.1 43 319,202,574 41 4,900 42.56
45 cabbage white (genbank 2021) Pieris rapae GCA_905147795.1_ilPieRapa1.1 40 256,370,197 4 1,000 39.06
46 California sea lion (BS06 2019 Broad) Zalophus californianus GCA_004024565.1_ZalCal_v1_BIUU 571,996 2,519,860,747 10,276 1,027,600 44.02
47 California sea lion (v1 2019 VGP) Zalophus californianus GCA_009762305.1_mZalCal1.pri 43 2,408,658,503 122 17,343,033 43.41
48 Canada lynx (LIC74 v1 2019 VGP) Lynx canadensis GCF_007474595.1_mLynCan4_v1.p 66 2,408,883,772 848 2,778,737 43.35
49 Cape golden mole (BS56 2019 Broad) Chrysochloris asiatica GCA_004027935.1_ChrAsi_v1_BIUU 3,428,078 4,750,461,421 4,876 487,600 58.19
50 carmine bee-eater (2014 BGI) Merops nubicus GCF_000691845.1_ASM69184v1 53,499 1,062,961,556 50,632 4,452,950 19.28
51 cassava (v6 AM560-2 2016 DOE) Manihot esculenta GCF_001659605.1_Manihot_esculenta_v6 2,020 582,278,977 37,896 86,649,479 42.35
52 cattle (Hereford 2015) Bos taurus GCA_000003205.6_Btau_5.0.1 3,143 2,724,980,740 41,517 11,951,885 49.04
53 cattle (Hereford L1 Dominette 01449 42190680 v2 2018 USDA) Bos taurus GCF_002263795.1_ARS-UCD1.2 2,211 2,715,853,792 386 28,162 49.35
54 Chacoan peccary (BS18 v1 2019 Broad) Catagonus wagneri GCA_004024745.1_CatWag_v1_BIUU 1,230,162 2,593,589,281 10,534 1,053,400 43.19
55 channel bull blenny (2019 genbank VGP) Cottoperca gobio GCA_900634415.1_fCotGob3.1 322 609,391,784 445 2,553,975 28.72
56 channel catfish (USDA103 v1 2016) Ictalurus punctatus GCF_001660625.1_IpCoco_1.2 9,341 783,274,721 25,203 11,381,915 33.99
57 cheetah (AJU 981 2015) Acinonyx jubatus GCA_001443585.1_aciJub1 14,382 2,372,536,860 183,260 42,058,837 41.79
58 chimney swift (M959 v1.0 2014) Chaetura pelagica GCF_000747805.1_ChaPel_1.0 19,072 1,119,188,094 65,523 45,064,234 19.72
59 chimpanzee genbank Pan troglodytes GCA_002880755.3_Clint_PTRv2 4,344 3,024,031,013 693 30,871,862 53.31
60 China rose (Old Blush v1 2018) Rosa chinensis GCF_002994745.1_RchiOBHm-V2 45 513,854,168 33 3,300 35.16
61 Chinese hamster (17A/GY CHO 2018) Cricetulus griseus GCF_003668045.1_CriGri-PICR 1,830 2,368,906,908 4,356 2,853,013 32.76
62 chuck-will's-widow (BGI_N321 v1 2014) Antrostomus carolinensis GCF_000700745.1_ASM70074v1 70,122 1,119,683,066 56,667 4,405,452 20.50
63 climbing perch (v1.1 2018 refseq VGP) Anabas testudineus GCF_900324465.1_fAnaTes1.1 70 569,722,067 292 7,669,072 21.87
64 climbing perch (v1.2 2018 genbank VGP) Anabas testudineus GCA_900324465.2_fAnaTes1.2 50 555,641,398 266 3,606,496 21.33
65 clouded yellow (genbank 2021) Colias croceus GCA_905220415.1_ilColCroc2.1 33 324,912,214 9 3,300 42.17
66 common bottlenose dolphin (maternal Y genbank 2020 VGP) Tursiops truncatus GCA_011762595.1_mTurTru1.mat.Y 362 2,378,522,214 674 6,222,516 46.05
67 common bottlenose dolphin (MMES2002162SC 2016 genbank) Tursiops truncatus GCA_001922835.1_NIST_Tur_tru_v1 2,647 2,132,499,883 114,003 12,216,051 43.66
68 common brushtail (genbank 2020 VGP) Trichosurus vulpecula GCA_011100635.1_mTriVul1.pri 212 3,359,347,793 1,796 18,696,463 40.57
69 common carp (2014) Cyprinus carpio GCF_000951615.1_common_carp_genome 9,378 1,713,658,011 57,940 43,277,959 37.43
70 common cuckoo (BGI 2014) Cuculus canorus GCF_000709325.1_ASM70932v1 14,930 1,153,894,225 56,977 27,473,416 19.87
71 common house spider (v2 2017) Parasteatoda tepidariorum GCF_000365465.2_Ptep_2.0 16,533 1,445,396,121 247,378 266,491,055 40.32
72 common swift (bApuApu2 2021 VGP genbank) Apus apus GCA_020740795.1_bApuApu2.pri.cur 109 1,100,361,224 256 1,747,529 21.21
73 common vampire bat (v2 DRU21DN04 2018 genbank) Desmodus rotundus GCA_002940915.2_ASM294091v2 29,800 2,063,791,738 54,308 45,952,385 29.29
74 common vampire bat (v2 DRU21DN04 2018 refseq) Desmodus rotundus GCF_002940915.1_ASM294091v2 29,801 2,063,808,397 54,308 45,952,385 28.84
75 Coquerel's sifaka 6110/Marcella (2015 genbank) Propithecus coquereli GCA_000956105.1_Pcoq_1.0 22,538 2,798,135,037 276,544 714,387,616 29.68
76 cowpea (IT97K-499-35 v1 2019) Vigna unguiculata GCF_004118075.1_ASM411807v1 682 519,066,764 68 2,720,798 41.67
77 crab-eating macaque WashU 2013 genbank Macaca fascicularis GCA_000364345.1_Macaca_fascicularis_5.0 7,600 2,946,827,162 80,474 142,977,352 48.92
78 crab-eating macaque WashU 2013 refseq Macaca fascicularis GCF_000364345.1_Macaca_fascicularis_5.0 7,601 2,946,843,737 80,474 142,977,352 48.77
79 degu (3935 2012 genbank) Octodon degus GCA_000260255.1_OctDeg1.0 7,133 2,995,866,140 252,770 469,628,236 29.31
80 dog (BS72 2019 Broad) Canis lupus familiaris GCA_004027395.1_CanFam_VD_v1_BIUU 656,742 2,544,127,025 10,428 1,042,800 45.44
81 domestic ferret (Sable ID 1420 FGSC 2011) Mustela putorius furo GCF_000215625.1_MusPutFur1.0 7,742 2,410,774,536 109,700 132,851,443 37.00
82 domestic guinea pig (2N 2008 genbank) Cavia porcellus GCA_000151735.1_Cavpor3.0 3,143 2,723,202,840 58,460 59,849,908 38.03
83 domestic silkworm (genbank 2020) Bombyx mori GCA_014905235.2_Bmori_2016v1.0 696 460,334,017 30 452,530 47.68
84 downy woodpecker (BGI 2014) Picoides pubescens GCF_000699005.1_ASM69900v1 31,254 1,167,323,935 96,471 43,403,938 27.85
85 E. coli (K-12 BW25113 2014 genbank) Escherichia coli BW25113 GCA_000750555.1_ASM75055v1 1 4,631,469 0 0 7.44
86 East African water lily (v1 Beijing-Zhang1983 2019) Nymphaea colorata GCF_008831285.1_ASM883128v1 800 409,013,923 627 62,502 26.82
87 Egyptian rousette (US006 2019 Broad) Rousettus aegyptiacus GCA_004024865.1_RouAeg_v1_BIUU 221,754 1,972,131,931 4,332 433,200 32.69
88 elephant shark (2013) Callorhinchus milii GCF_000165045.1_Callorhinchus_milii-6.1.3 21,204 974,498,586 46,232 37,545,143 36.81
89 eudicots lettuce (Salinas v7 2020) Lactuca sativa GCF_002870075.2_Lsat_Salinas_v7 8,325 2,391,578,241 353,389 181,680,577 52.96
90 Eurasian water vole (v1 2020) Arvicola amphibius GCF_903992535.1_mArvAmp1.1 216 2,297,765,997 872 6,026,660 32.43
91 European peacock (2021 genbank) Nymphalis io GCA_905147045.1_ilAglIoxx1.1 42 384,172,283 10 2,415 46.90
92 European turtle dove (v1.1 2019 VGP) Streptopelia turtur GCA_901699155.1_bStrTur1.1 357 1,178,928,410 894 3,876,374 21.07
93 fall armyworm (Faw-zju 2020 genbank) Spodoptera frugiperda GCA_011064685.1_ZJU_Sfru_1.0 91 486,271,792 525 52,500 37.37
94 fall armyworm (Faw-zju v1.0 refseq 2020) Spodoptera frugiperda GCF_011064685.1_ZJU_Sfru_1.0 92 486,287,157 525 52,500 37.37
95 flier cichlid (MPI-CPG 2019 genbank VGP) Archocentrus centrarchus GCA_007364275.2_fArcCen1 189 932,947,025 744 16,903,477 30.69
96 Florida manatee (Lorelei 2012 genbank) Trichechus manatus latirostris GCA_000243295.1_TriManLat1.0 6,322 3,103,791,524 160,167 334,708,729 38.47
97 fly D.santomea (v1.0 2021) Drosophila santomea GCF_016746245.1_Prin_Dsan_1.0 104 146,781,989 14 1,400 23.29
98 fly D.sechellia (sech25 v1 2019 UC Irvine) Drosophila sechellia GCF_004382195.1_ASM438219v1 402 154,170,815 38 3,800 25.80
99 fly D.simulans (w501 v3.0 2021) Drosophila simulans GCF_016746395.1_Prin_Dsim_3.0 96 131,678,491 2 1,000 23.77
100 fly D.yakuba (2018) Drosophila yakuba GCF_000005975.2_dyak_caf1 8,123 165,709,965 5,400 3,112,072 24.05
101 fly D.yakuba (v1 2021) Drosophila yakuba GCF_016746365.1_Prin_Dyak_Tai18E2_2.0 54 147,899,151 11 1,100 23.58
102 Gaboon caecilian (2019 genbank VGP) Geotrypetes seraphini GCA_902459505.1_aGeoSer1.1 163 3,779,413,726 433 5,502,713 52.86
103 giant panda (2009 BGI) Ailuropoda melanoleuca GCF_000004335.2_AilMel_1.0 81,467 2,299,509,015 119,126 54,196,184 39.14
104 giant panda (Jingjing v1 2017) Ailuropoda melanoleuca GCA_002007445.1_ASM200744v1 57,412 2,428,261,127 186,846 46,792,990 40.90
105 giant panda (Jingjing v2 2020) Ailuropoda melanoleuca GCF_002007445.1_ASM200744v2 77,288 2,444,077,458 190,364 46,955,198 40.71
106 Glanville fritillary (genbank 2021) Melitaea cinxia GCA_905220565.1_ilMelCinx1.1 32 499,413,036 80 25,000 48.62
107 globe artichoke (v1 2C 2018) Cynara cardunculus var. scolymus GCF_001531365.1_CcrdV1 8,283 725,197,765 310,473 70,818,977 39.50
108 goat (v1 San Clemente 2016 USDA genbank) Capra hircus GCA_001704415.1_ARS1 29,906 2,922,796,603 790 39,279 50.62
109 goat (v1 San Clemente 2016 USDA refseq) Capra hircus GCF_001704415.1_ARS1 29,907 2,922,813,246 790 39,279 50.26
110 golden eagle (v1.2 2019 VGP) Aquila chrysaetos chrysaetos GCF_900496995.1_bAquChr1.2 142 1,203,454,851 191 4,639,807 19.26
111 golden hamster (Baylor 2013 genbank) Mesocricetus auratus GCA_000349665.1_MesAur1.0 21,483 2,504,908,775 216,216 428,748,785 24.30
112 golden snub-nosed monkey (2014 Novogene) Rhinopithecus roxellana GCA_000769185.1_Rrox_v1 135,513 2,899,551,855 61,291 43,508,254 50.65
113 gray mouse lemur genbank Microcebus murinus GCA_000165445.3_Mmur_3.0 7,677 2,487,392,024 43,363 101,087,221 39.97
114 great roundleaf bat (ML-2016 2016 genbank) Hipposideros armiger GCA_001890085.1_ASM189008v1 7,570 2,236,564,388 172,751 281,788,372 28.05
115 greater horseshoe bat (v1 MPI-CBG 2019 genbank VGP) Rhinolophus ferrumequinum GCA_004115265.2_mRhiFer1_v1.p 135 2,075,785,400 158 7,546,098 34.90
116 greater horseshoe bat (v1 MPI-CBG 2019 refseq VGP) Rhinolophus ferrumequinum GCF_004115265.1_mRhiFer1_v1.p 134 2,075,768,562 158 7,546,098 34.48
117 greater mouse-eared bat (2019 Broad) Myotis myotis GCA_004026985.1_MyoMyo_v1_BIUU 1,045,197 2,294,472,406 8,133 813,300 39.02
118 greater pipefish (v1.1 2019 VGP) Syngnathus acus GCA_901709675.1_fSynAcu1.1 87 324,331,233 43 13,700 25.95
119 green algae C.reinhardtii CC-503 cw92 (v1 2007) Chlamydomonas reinhardtii GCF_000002595.1_v3.0 1,558 120,404,952 10,425 14,994,990 30.46
120 green monkey 1994-021 (2014 genbank) Chlorocebus sabaeus GCA_000409795.2_Chlorocebus_sabeus_1.1 2,003 2,789,639,778 178,925 37,655,314 49.58
121 green sea turtle (BGI 2013) Chelonia mydas GCF_000344595.1_CheMyd_1.0 140,023 2,208,410,377 134,344 98,028,380 28.33
122 green sea turtle (v1 2020) Chelonia mydas GCF_015237465.1_rCheMyd1.pri 99 2,134,593,249 294 11,959,915 31.97
123 Hawaiian crow (VGP 2021 genbank) Corvus hawaiiensis GCA_020740725.1_bCorHaw1.pri.cur 187 1,151,594,481 294 1,813,227 23.63
124 Hawaiian monk seal (2017 Johns Hopkins U refseq) Neomonachus schauinslandi GCF_002201575.1_ASM220157v1 7,872 2,400,839,308 38,833 53,716,773 42.35
125 Hawaiian monk seal (2017 Johns Hopkins U genbank) Neomonachus schauinslandi GCA_002201575.1_ASM220157v1 7,871 2,400,822,554 38,833 53,716,773 42.75
126 hooded crow (2017) Corvus cornix cornix GCF_000738735.2_ASM73873v2 113 1,042,281,180 27,795 30,616,787 18.24
127 horse (Twilight 2007 genbank) Equus caballus GCA_000002305.1_EquCab2.0 9,636 2,474,912,402 45,680 46,138,889 44.34
128 house mouse Mus musculus GCF_000001635.26_GRCm38.p6 239 2,818,974,548 904 79,435,853 43.43
129 Indian medaka Oryzias melastigma GCF_002922805.1_Om_v0.7.RACA 8,603 779,469,774 51,440 41,237,672 33.31
130 Jamaican fruit-eating bat (US092 2019 Broad) Artibeus jamaicensis GCA_004027435.1_ArtJam_v1_BIUU 794,376 2,424,784,351 4,324 432,400 34.14
131 Japanese quail Coturnix japonica GCF_001577835.1_Coturnix_japonica_2.0 2,012 927,656,957 11,601 10,397,704 19.88
132 Jerdon's jumping ant (DR-91 v8.5 2018) Harpegnathos saltator GCF_003227715.1_Hsal_v8.5 857 334,536,844 499 937,191 29.33
133 kakapo (Jane v1 2019 VGP) Strigops habroptila GCF_004027225.1_bStrHab1_v1.p 99 1,165,621,973 362 27,568,509 20.23
134 kakapo (Jane v2 2020 genbank VGP) Strigops habroptila GCA_004027225.2_bStrHab1.2.pri 90 1,148,615,375 373 10,544,081 20.53
135 large cabbage white (genbank 2021) Pieris brassicae GCA_905147105.1_ilPieBrab1.1 402 292,341,157 29 5,637 41.05
136 leatherback sea turtle (v3 2020 refseq G10K VGP) Dermochelys coriacea GCF_009764565.2_rDerCor1.pri.v3 40 2,164,762,090 667 5,594,612 34.21
137 leatherback sea turtle (v1 2019 genbank G10K VGP) Dermochelys coriacea GCA_009764565.1_rDerCor1.pri 55 2,165,403,198 558 5,729,700 34.13
138 lesser Egyptian jerboa (JJ0015 2012 genbank) Jaculus jaculus GCA_000280705.1_JacJac1.0 10,895 2,835,226,221 326,464 364,982,898 33.98
139 lesser kestrel (v1 2021 VGP) Falco naumanni GCF_017639655.1_bFalNau1.pat 291 1,215,719,379 298 4,077,287 19.20
140 lettuce (Salinas v1 2018) Lactuca sativa GCF_002870075.1_Lsat_Salinas_v7 11,453 2,384,188,817 350,251 174,654,477 53.12
141 leopard (Maewha 2016 genbank) Panthera pardus GCA_001857705.1_PanPar1.0 50,376 2,578,002,243 214,953 99,153,465 41.28
142 lumpfish (2019 genbank VGP) Cyclopterus lumpus GCA_009769545.1_fCycLum1.pri 49 572,902,877 347 10,182,204 28.09
143 Ma's night monkey genbank Aotus nancymaae GCA_000952055.2_Anan_2.0 28,921 2,861,668,348 83,929 147,245,327 45.30
144 Malayan pangolin (MP_PG03-UM 2016 genbank) Manis javanica GCA_001685135.1_ManJav1.0 80,669 2,547,379,330 984,656 198,861,917 32.47
145 malo sina (v1 2012) Oryza brachyantha GCF_000231095.1_Oryza_brachyantha.v1.4b 2,491 259,907,595 20,693 17,431,658 24.13
146 mangrove rivulus Kryptolebias marmoratus GCF_001649575.1_ASM164957v1 3,073 680,366,784 29,388 38,533,415 27.35
147 meadow brown (genbank 2021) Maniola jurtina GCA_905333055.1_ilManJurt1.1 32 402,054,102 21 3,697 43.99
148 meerkat (BS45 2019 Broad) Suricata suricatta GCA_004023905.1_SurSur_v1_BIUU 349,868 2,471,813,441 4,153 415,300 40.76
149 melon fly (v1 USDA-PBARC White Pupae T1 2014) Zeugodacus cucurbitae GCF_000806345.1_ASM80634v1 5,572 374,820,345 37,430 58,538,880 31.97
150 minke whale (2013 genbank) Balaenoptera acutorostrata scammoni GCA_000493695.1_BalAcu1.0 10,775 2,431,671,281 173,296 145,030,652 39.76
151 Mongolian gerbil (US013 2019 Broad) Meriones unguiculatus GCA_004026785.1_MerUng_v1_BIUU 785,187 2,637,041,433 11,139 1,113,900 39.32
152 moth S.litura (Ishihara v1 2017) Spodoptera litura GCF_002706865.1_ASM270686v1 2,975 438,956,275 10,662 10,919,137 37.01
153 mute swan (v1 2019 VGP) Cygnus olor GCA_009769625.1_bCygOlo1.pri 181 1,135,009,278 446 10,642,469 21.24
154 naked mole-rat (NMR 29 2012 genbank) Heterocephalus glaber GCA_000247695.1_HetGla_female_1.0 4,228 2,618,188,253 110,424 303,433,536 28.99
155 narwhal (BS41 2019 Broad) Monodon monoceros GCA_004026685.1_MonMon_M_v1_BIUU 644,873 2,472,545,502 8,600 860,000 44.83
156 nematode C.briggsae (AF16 v1 2008) Caenorhabditis briggsae GCF_000004555.1_ASM455v1 12 108,478,526 6,713 3,041,279 35.50
157 New South Wales waratah (AGSP 2013) Amborella trichopoda GCF_000471905.2_AMTR1.0 5,746 706,495,326 39,556 38,113,750 36.08
158 nine-banded armadillo (v3.0 3-136 2012 Baylor genbank) Dasypus novemcinctus GCA_000208655.2_Dasnov3.0 46,558 3,631,505,655 268,442 331,640,683 44.64
159 nine-banded armadillo (v3.0 3-136 2012 Baylor refseq) Dasypus novemcinctus GCF_000208655.1_Dasnov3.0 46,559 3,631,522,711 268,442 331,640,683 44.46
160 northern pike (2020 genbank VGP) Esox lucius GCA_011004845.1_fEsoLuc1.pri 53 918,749,000 112 1,022,735 32.97
161 northern white-cheeked gibbon (2012 GGSC) Nomascus leucogenys GCA_000146795.3_Nleu_3.0 17,492 2,962,077,449 180,468 205,468,402 48.35
162 Norway rat BN7 genbank Rattus norvegicus GCA_015227675.2_mRatBN7.2 176 2,647,915,728 581 21,334,956 44.34
163 olive baboon (2017 HGSC RefSeq) Papio anubis GCF_000264685.3_Panu_3.0 63,235 2,959,373,024 58,981 22,371,497 52.12
164 olive baboon (2017 HGSC genbank) Papio anubis GCA_000264685.2_Panu_3.0 63,234 2,959,356,508 58,981 22,371,497 52.44
165 painted lady (genbank 2021) Vanessa cardui GCA_905220365.1_ilVanCard2.1 37 424,813,639 91 26,300 44.41
166 pale spear-nosed bat (MPI-MPIP v1 2019 VGP) Phyllostomus discolor GCF_004126475.1_mPhyDis1_v1.p 141 2,117,764,065 831 22,966,458 30.49
167 pea aphid (AL4f v1 2019) Acyrthosiphon pisum GCF_005508785.1_pea_aphid_22Mar2018_4r6ur 21,920 541,137,574 46,297 41,398,552 48.41
168 pigeon pea (v1 2016 BGI) Cajanus cajan GCF_000340665.1_C.cajan_V1.0 36,536 592,970,700 36,387 34,435,295 39.25
169 pike-perch Sander lucioperca GCF_008315115.1_SLUC_FBN_1 1,313 900,477,767 94 24,999 36.36
170 platypus (Pmale09 2018 BGI) Ornithorhynchus anatinus GCA_002966995.1_ASM296699v1 4,568 1,990,409,179 476 47,600 52.94
171 platypus (Pmale09 v1 2019 VGP) Ornithorhynchus anatinus GCF_004115215.1_mOrnAna1.p.v1 305 1,858,552,590 522 15,159,818 50.97
172 platypus (Pmale09 v3 2020 VGP) Ornithorhynchus anatinus GCA_004115215.3_mOrnAna1.pri.v3 322 1,859,281,749 515 15,158,118 51.26
173 polar bear (Baiyulong BGI 2014 genbank) Ursus maritimus GCA_000687225.1_UrsMar_1.0 23,818 2,301,362,327 110,343 38,357,410 40.32
174 prehistoric monster fish (2019 genbank VGP) Thalassophryne amazonica GCA_902500255.1_fThaAma1.1 464 2,446,592,878 2,554 12,594,266 59.92
175 pronghorn (BS35 2019 Broad) Antilocapra americana GCA_004027515.1_AntAmePen_v1_BIUU 1,643,131 2,899,768,642 6,569 656,900 43.65
176 Przewalski's horse (Burgud 2014 genbank) Equus przewalskii GCA_000696695.1_Burgud 53,096 2,395,937,679 80,963 21,135,449 41.10
177 puma (SC36_Marlon 2018 genbank) Puma concolor GCA_003327715.1_PumCon1.0 2,174 2,432,949,531 178,992 114,069,938 40.74
178 pygmy chimpanzee (Ulindi genbank 2015) Pan paniscus GCA_000258655.2_panpan1.1 10,274 3,286,643,938 156,797 560,753,890 42.26
179 rabbit (Thorbecke 2009 Broad genbank) Oryctolagus cuniculus GCA_000003625.1_OryCun2.0 3,241 2,737,473,256 80,789 133,467,217 42.51
180 red admiral (genbank 2021) Vanessa atalanta GCA_905147765.2_ilVanAtal1.2 142 370,436,055 18 3,582 41.83
181 red-crested turaco (2014 BGI) Tauraco erythrolophus GCF_000709365.1_ASM70936v1 59,587 1,155,540,733 75,085 6,806,072 20.46
182 red-legged seriema (BGI_N322 2014 BGI) Cariama cristata GCF_000690535.1_ASM69053v1 53,474 1,132,245,425 59,230 4,299,662 18.26
183 red mason bee (LIB18336 2019) Osmia bicornis bicornis GCF_004153925.1_Obicornis_v3 10,222 210,591,136 2,089 33,406 28.65
184 Rhesus monkey (2015 Baylor) Macaca mulatta GCA_000772875.3_Mmul_8.0.1 284,727 3,236,207,768 64,538 94,132,579 53.08
185 rifleman (BGI 2014) Acanthisitta chloris GCF_000695815.1_ASM69581v1 53,875 1,035,876,403 66,437 4,778,007 18.37
186 ring-tailed lemur BS26 Broad 2019 Lemur catta GCA_004024665.1_LemCat_v1_BIUU 575,427 2,298,449,872 4,599 459,900 39.29
187 Rio pearlfish (Nwh7 v1 2020) Nematolebias whitei GCF_014905685.1_NemWhi1 18,998 1,218,316,901 100,521 97,663,390 42.85
188 Ryukyu mouse (2017 EBI genbank) Mus caroli GCA_900094665.2_CAROLI_EIJ_v1.1 3,161 2,553,105,128 306,650 280,223,414 35.76
189 salmon louse (v1.1 2020) Lepeophtheirus salmonis GCF_016086655.2_UVic_Lsal_1.1 9,833 650,300,227 608 60,449 53.54
190 sea otter (GAN:26980312 2017 genbank) Enhydra lutris kenyoni GCA_002288905.2_ASM228890v2 6,767 2,455,089,215 23,134 29,682,816 40.96
191 Siamese fighting fish (v2 2019) Betta splendens GCF_900634795.2_fBetSpl5.2 70 441,388,503 328 29,269 23.93
192 silvery gibbon Hylobates moloch GCF_009828535.1_HMol 18,392 2,340,327,933 18,567 42,111,658 49.74
193 small Madagascar hedgehog Echinops telfairi GCA_000313985.1_EchTel2.0 8,401 2,947,007,737 269,444 341,827,925 32.24
194 snowberry fruit fly (East Lansing v1.0 2016) Rhagoletis zephyria GCF_001687245.1_Rhagoletis_zephyria_1.0 86,670 1,113,962,544 227,684 68,863,791 43.03
195 sockeye salmon (On170113-E2 v1 2019) Oncorhynchus nerka GCF_006149115.1_Oner_1.0 36,124 1,927,141,915 25,659 74,077,260 48.53
196 southern grasshopper mouse (US017 2019 Broad) Onychomys torridus GCA_004026725.1_OnyTor_v1_BIUU 2,261,735 3,202,219,269 10,550 1,055,000 41.85
197 southern two-toed sloth (US054 2019 Broad) Choloepus didactylus GCA_004027855.1_ChoDid_v1_BIUU 2,532,333 3,390,661,301 5,099 509,900 41.14
198 southern white rhinoceros (SDZICR_KB13650 2012 genbank) Ceratotherium simum simum GCA_000283155.1_CerSimSim1.0 3,086 2,464,350,348 54,737 97,509,168 37.80
199 soybean (US DOE JGI-PGF v2.0 2010) Glycine max GCF_000004515.4_Glycine_max_v2.0 1,191 978,971,636 15,955 23,046,524 45.31
200 soybean (US DOE JGI-PGF v2.1 2018) Glycine max GCF_000004515.5_Glycine_max_v2.1 1,192 979,046,046 15,995 23,113,809 45.31
201 speckled wood butterfly (genbank 2021) Pararge aegeria GCA_905163445.1_ilParAegt1.1 71 516,586,240 11 1,998 44.44
202 sponges A.queenslandica (v1.0 2010 JGI-PGF) Amphimedon queenslandica GCF_000090795.1_v1.0 13,398 166,699,561 14,944 21,833,216 24.61
203 Sumatran orangutan (2018 genbank) Pongo abelii GCA_002880775.3_Susie_PABv2 5,260 3,065,035,716 553 21,607,691 54.33
204 Swainson's thrush (v1 2019 VGP) Catharus ustulatus GCF_009819885.1_bCatUst1.pri 161 1,131,616,430 428 12,903,595 22.52
205 Tasmanian devil Sarcophilus harrisii GCF_000189315.1_Devil_ref_v7.0 35,974 3,174,693,010 201,403 243,153,308 39.48
206 thirteen-lined ground squirrel (2011) Ictidomys tridecemlineatus GCF_000236235.1_SpeTri2.0 12,483 2,478,393,770 141,005 167,333,470 33.26
207 thorny skate (CabotCenter1 v1 2020 genbank VGP) Amblyraja radiata GCA_010909765.1_sAmbRad1.pri 958 2,558,801,738 3,753 190,972,533 52.28
208 thorny skate (CabotCenter1 v1 2020 refseq VGP) Amblyraja radiata GCF_010909765.1_sAmbRad1.pri 957 2,558,784,953 3,753 190,972,533 52.28
209 tiger tail seahorse (QL1 v1 2016) Hippocampus comes GCF_001891065.1_H_comes_QL1_v1 37,377 493,775,940 23,101 34,408,932 24.52
210 tomato (v3.0 Heinz 1706 2018) Solanum lycopersicum GCF_000188115.4_SL3.0 3,150 828,349,174 19,634 81,405,486 35.29
211 Ugandan red Colobus (RC106 v1 2017) Piliocolobus tephrosceles GCA_002776525.1_ASM277652v1 47,644 2,922,819,259 77,615 99,907,110 49.45
212 Ugandan red Colobus (RC106 v2 2018) Piliocolobus tephrosceles GCF_002776525.2_ASM277652v2 47,449 3,038,007,327 63,620 88,304,875 50.19
213 Ugandan red Colobus (RC106 v3 2019) Piliocolobus tephrosceles GCF_002776525.3_ASM277652v3 46,654 3,037,997,551 64,415 88,300,329 49.85
214 Upper Galilee mountains blind mole rat (#2095 2014 genbank) Nannospalax galili GCA_000622305.1_S.galili_v1.0 154,975 3,061,408,210 201,121 147,976,214 36.23
215 valley oak (v3.0 2019) Quercus lobata GCF_001633185.1_ValleyOak3.0 2,010 846,070,421 1,674 1,928,049 37.85
216 water buffalo (Mediterranean 2013) Bubalus bubalis GCA_000471725.1_UMD_CASPUR_WB_2.0 366,982 2,836,150,610 263,385 74,388,041 46.13
217 Weddell seal (WS11-02 2013 genbank) Leptonychotes weddellii GCA_000349705.1_LepWed1.0 16,710 3,156,886,159 152,836 933,738,633 29.40
218 western European hedgehog (2012 genbank) Erinaceus europaeus GCA_000296755.1_EriEur2.0 5,802 2,715,703,478 219,764 382,647,390 42.03
219 western lowland gorilla (Susie 2016) Gorilla gorilla gorilla GCA_900006655.3_Susie3 15,297 3,084,595,669 768 10,991,312 50.19
220 western painted turtle (v303 2014) Chrysemys picta bellii GCF_000241765.3_Chrysemys_picta_bellii-3.0.3 78,595 2,365,766,571 183,744 192,562,473 28.95
221 western predatory mite (v1.0 2012) Galendromus occidentalis GCF_000255335.1_Mocc_1.0 2,211 151,724,311 1,901 400,558 9.75
222 wheat stem sawfly (v1 2014) Cephus cinctus GCF_000341935.1_Ccin1 1,976 162,245,578 8,733 3,073,234 22.27
223 white-footed mouse Peromyscus leucopus GCF_004664715.1_Pero_0.1 1,763 2,474,071,336 79 18,851 33.02
224 white leghorn X broiler chicken (leghorn haplotype v1 2021 VGP) Gallus gallus GCF_016700215.1_bGalGal1.pat.whiteleghornlayer.GRCg7w 255 953,182,234 254 3,312,879 20.28
225 white-tailed deer (Pink-7 2017 genbank) Odocoileus virginianus texanus GCA_002102435.1_Ovir.te_1.0 17,025 2,380,489,210 107,030 21,568,155 40.94
226 white-tufted-ear marmoset (CJ-08-46 2017) Callithrix jacchus GCA_002754865.1_ASM275486v1 39,944 2,845,375,248 48,495 9,511,100 48.71
227 white-tufted-ear marmoset (2010 Wash U) Callithrix jacchus GCF_000004665.1_Callithrix_jacchus-3.2 14,205 2,914,958,544 187,214 162,452,744 45.93
228 white-tufted-ear marmoset (cj1700 genbank) Callithrix jacchus GCA_009663435.1_Callithrix_jacchus_cj1700_1.0 962 2,889,579,754 370 37,607,402 48.82
229 wild Bactrian camel (CB1 Naran 2013 genbank) Camelus ferus GCA_000311805.2_CB1 13,333 2,009,177,929 60,971 23,778,176 34.36
230 wild emmer wheat (Zavitan Atlit2015 v2.0 2019) Triticum dicoccoides GCF_002162155.1_WEW_v2.0 148,396 10,677,929,594 344,768 353,856,019 2.75
231 wire-tailed manakin (2018) Pipra filicauda GCF_003945595.1_ASM394559v1 3,744 1,110,963,465 102 38,956 20.58
232 woodchuck Marmota monax GCA_901343595.1_MONAX5 48,511 2,625,891,882 57,045 74,045,625 32.84
233 Yangtze finless porpoise (v1 2018 genbank) Neophocaena asiaeorientalis asiaeorientalis GCA_003031525.1_Neophocaena_asiaeorientalis_V1 13,698 2,284,611,699 52,647 16,346,815 42.26
234 Yangtze finless porpoise (v1 2018 refseq) Neophocaena asiaeorientalis asiaeorientalis GCF_003031525.1_Neophocaena_asiaeorientalis_V1 13,699 2,284,628,084 52,647 16,346,815 41.77
235 Yangtze River dolphin (BGI 2013 genbank) Lipotes vexillifer GCA_000442215.1_Lipotes_vexillifer_v1 30,712 2,429,195,737 124,797 32,195,939 43.55
236 yellow-bellied marmot (v1 2018) Marmota flaviventris GCF_003676075.1_ASM367607v1 31,149 2,576,929,359 38,354 56,254,325 32.75
237 yellow-bellied marmot (SJ_83 v2.0 2019) Marmota flaviventris GCF_003676075.2_GSC_YBM_2.0 31,859 2,576,161,375 35,595 52,577,818 33.45
238 yellow-throated sandgrouse (BGI_N339 2014 BGI) Pterocles gutturalis GCF_000699245.1_ASM69924v1 58,607 1,069,324,295 48,553 3,605,558 19.26
239 zebra finch (Black17 v1 2019 genbank VGP) Taeniopygia guttata GCA_003957565.2_bTaeGut1_v1.p 135 1,058,012,133 312 2,334,250 21.55
240 zebra finch (Black17 v1 2019 refseq VGP) Taeniopygia guttata GCF_003957565.1_bTaeGut1_v1.p 135 1,058,012,133 312 2,334,250 21.55
241 zebu cattle (Nelore 2014 genbank) Bos indicus GCA_000247795.2_Bos_indicus_1.0 31 2,673,949,103 6,941,272 204,955,425 43.27
242 zig-zag eel (v1.1 2018 VGP) Mastacembelus armatus GCF_900324485.1_fMasArm1.1 126 593,082,472 235 14,056,798 23.45
TOTALS:total assembly count 242 26,516,265 443,513,097,745 21,908,632 15,463,442,799  

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 57 assemblies assembly stats track stats
Mammals 348 assemblies assembly stats track stats
Birds 171 assemblies assembly stats track stats
Fishes 179 assemblies assembly stats track stats
other vertebrates 73 assemblies assembly stats track stats
Invertebrates 470 assemblies assembly stats track stats
Plants 173 assemblies assembly stats track stats
Fungi 463 assemblies assembly stats track stats
Viruses 254 assemblies assembly stats track stats
VGP - Vertebrate Genome Project 261 assemblies assembly stats track stats
legacy/superseded 242 assemblies assembly stats track stats