1 |
acorn woodpecker (bairdi alternate hap 2022) |
Melanerpes formicivorus |
GCA_026170555.1_bMelFor1.0.a |
2,294 |
1,438,781,011 |
1,555 |
155,500 |
43.03 |
2 |
acorn woodpecker (bairdi primary hap 2022) |
Melanerpes formicivorus |
GCA_026170545.1_bMelFor1.0.p |
3,174 |
1,323,584,679 |
1,317 |
131,700 |
42.41 |
3 |
American black bear (L20-20 alternate hap 2022) |
Ursus americanus |
GCA_024610745.1_mUrsAme1.0.a |
77,311 |
2,885,111,784 |
0 |
0 |
35.68 |
4 |
American black bear (L20-20 primary hap 2022) |
Ursus americanus |
GCA_024610735.1_mUrsAme1.0.p |
317 |
2,524,264,886 |
22 |
2,200 |
35.55 |
5 |
American ruby spot damselfly (1083.01 alternate hap 2022) |
Hetaerina americana |
GCA_022747625.1_ioHetAmer1.0.a |
434 |
1,389,467,078 |
275 |
27,500 |
35.07 |
6 |
American ruby spot damselfly (1083.01 primary hap 2022) |
Hetaerina americana |
GCA_022747635.1_ioHetAmer1.0.p |
1,583 |
1,630,044,487 |
300 |
30,002 |
38.82 |
7 |
ant C.vicinus (PSW18456_S1 2022) |
Camponotus vicinus |
GCA_025532165.1_iyCamVici1.0 |
38 |
302,746,630 |
24 |
2,400 |
41.37 |
8 |
arroyo chub (AC-1 alternate hap 2022) |
Gila orcuttii |
GCA_026230005.1_fGilOrc1.0.hap1 |
179 |
1,263,410,250 |
327 |
32,700 |
50.53 |
9 |
arroyo chub (AC-1 primary hap 2022) |
Gila orcuttii |
GCA_026230025.1_fGilOrc1.0.hap2 |
341 |
1,272,848,069 |
318 |
31,800 |
50.58 |
10 |
bay (USA: Berkeley CA var. californica CCGP_DODD_UMBCAL_S1 alternate hap 2023) |
Umbellularia californica |
GCA_028538565.1_dmUmbCali1.0.hap2 |
197 |
959,572,790 |
39 |
3,900 |
45.57 |
11 |
bay (USA: Berkeley CA var. californica CCGP_DODD_UMBCAL_S1 primary hap 2023) |
Umbellularia californica |
GCA_028534965.1_dmUmbCali1.0.hap1 |
303 |
976,445,573 |
36 |
3,600 |
45.88 |
12 |
bigberry manzanita (GLNDR_RDG_Rd-6 2022) |
Arctostaphylos glauca |
GCA_019985065.2_ddArcGlau1.1p |
272 |
547,665,946 |
82 |
8,200 |
38.38 |
13 |
bigberry manzanita (GLNDR_RDG_Rd-6 alternate hap 2021) |
Arctostaphylos glauca |
GCA_019985075.1_ddArcGlau1.0.a |
2,350 |
556,397,040 |
120 |
13,200 |
44.59 |
14 |
black abalone (W230 alternate hap 2022) |
Haliotis cracherodii |
GCA_022045225.1_xgHalCrac1.a |
1,215 |
1,201,949,479 |
732 |
73,208 |
35.21 |
15 |
black abalone (W230 primary hap 2022) |
Haliotis cracherodii |
GCA_022045235.1_xgHalCrac1.p |
81 |
1,182,252,637 |
78 |
7,816 |
34.94 |
16 |
black cottonwood (Ptri.A.LA.226.w1 alternate hap 2023) |
Populus trichocarpa |
GCA_028534865.1_ddPopTric1.0.hap2 |
338 |
423,209,812 |
33 |
3,300 |
39.61 |
17 |
black cottonwood (Ptri.A.LA.226.w1 primary hap 2023) |
Populus trichocarpa |
GCA_028534895.1_ddPopTric1.0.hap1 |
132 |
423,921,969 |
26 |
2,600 |
40.08 |
18 |
black perch (LCO1_2020_lvr alternate hap 2022) |
Embiotoca jacksoni |
GCA_022578405.1_fEmbJac1.0.a |
62,783 |
1,686,865,087 |
639 |
63,900 |
26.96 |
19 |
black perch (LCO1_2020_lvr primary hap 2022) |
Embiotoca jacksoni |
GCA_022577435.1_fEmbJac1.0.p |
230 |
634,685,148 |
234 |
23,401 |
28.99 |
20 |
Blainville's horned lizard (alternate hap 2022) |
Phrynosoma blainvillii |
GCA_026167975.1_rPhrBla1.0.hap2 |
52 |
1,968,358,621 |
64 |
6,400 |
40.57 |
21 |
Blainville's horned lizard (primary hap 2022) |
Phrynosoma blainvillii |
GCA_026167985.1_rPhrBla1.0.hap1 |
78 |
2,210,317,752 |
73 |
7,300 |
40.92 |
22 |
bobcat (Redwood Valley CCGP_SWC_20201006 alternate hap 2022) |
Lynx rufus |
GCA_022079275.1_mLynRuf1.a |
68,111 |
3,320,153,114 |
4,716 |
471,601 |
33.84 |
23 |
bobcat (Redwood Valley CCGP_SWC_20201006 primary hap 2022) |
Lynx rufus |
GCF_022079265.1_mLynRuf1.p |
75 |
2,439,239,374 |
24 |
2,405 |
43.33 |
24 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 alternate hap 2022) |
Thomomys bottae |
GCA_024803775.1_mThoBot1.0.a |
3,340 |
3,469,049,410 |
124 |
12,400 |
61.87 |
25 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 primary hap 2022) |
Thomomys bottae |
GCA_024803745.1_mThoBot1.0.p |
2,792 |
2,845,630,888 |
106 |
10,600 |
57.15 |
26 |
California black rail (168171201 alternate hap 2022) |
Laterallus jamaicensis coturniculus |
GCA_022605925.1_bLatJam1.0.a |
3,563 |
1,211,372,722 |
1,672 |
167,200 |
30.43 |
27 |
California black rail (168171201 primary hap 2022) |
Laterallus jamaicensis coturniculus |
GCA_022605575.1_bLatJam1.0.p |
645 |
1,391,405,863 |
319 |
31,910 |
32.29 |
28 |
California black walnut (Jcal.S.LA.6 alternate hap 2022) |
Juglans californica |
GCA_023349545.1_dhJugClai1.0.a |
915 |
565,449,464 |
78 |
7,801 |
34.13 |
29 |
California black walnut (Jcal.S.LA.6 primary hap 2022) |
Juglans californica |
GCA_023349395.1_dhJugCali1.0.p |
138 |
551,767,272 |
11 |
1,108 |
34.97 |
30 |
California glossy snake (A.elegans occidentalis HBS 135684 alternate hap 2022) |
Arizona elegans |
GCA_022578425.1_rAriEle1.0.a |
54,869 |
2,206,698,359 |
5,955 |
595,511 |
46.05 |
31 |
California glossy snake (A.elegans occidentalis HBS 135684 primary hap 2022) |
Arizona elegans |
GCA_022577455.1_rAriEle1.0.p |
140 |
1,842,551,953 |
256 |
25,618 |
46.73 |
32 |
California mussel (2022) |
Mytilus californianus |
GCF_021869535.1_xbMytCali1.0.p |
175 |
1,651,950,171 |
324 |
32,618 |
47.55 |
33 |
California mussel (M0D057914Y alternate hap 2022) |
Mytilus californianus |
GCA_021869935.1_xbMytCali1.0.a |
38,315 |
2,213,012,655 |
140 |
14,140 |
48.80 |
34 |
California quail (MVZ:Bird:193975 alternate hap 2022) |
Callipepla californica brunnescens |
GCA_023055725.1_bCalCai1.0.a |
1,601 |
1,398,480,580 |
248 |
24,800 |
36.96 |
35 |
California quail (MVZ:Bird:193975 primary hap 2022) |
Callipepla californica brunnescens |
GCA_023055505.1_bCalCai1.0.p |
321 |
1,085,347,722 |
287 |
28,700 |
25.37 |
36 |
California scrub oak (Qber.S.LA.60 alternate hap 2023) |
Quercus berberidifolia |
GCA_028535905.1_dhQueBerb1.0.hap2 |
807 |
828,113,576 |
43 |
4,300 |
40.77 |
37 |
California scrub oak (Qber.S.LA.60 primary hap 2023) |
Quercus berberidifolia |
GCA_028535815.1_dhQueBerb1.0.hap1 |
283 |
801,701,692 |
32 |
3,200 |
41.09 |
38 |
California sheephead (SPU_LCO1_2020_fin alternate hap 2022) |
Semicossyphus pulcher |
GCA_022749735.1_fSemPul1.0.a |
13,198 |
1,095,728,264 |
2,679 |
267,900 |
32.04 |
39 |
California sheephead (SPU_LCO1_2020_fin primary hap 2022) |
Semicossyphus pulcher |
GCA_022749685.1_fSemPul1.0.p |
179 |
794,122,974 |
8 |
807 |
31.94 |
40 |
California vole (kernensis MVZ Mamm 240107 primary hap 2023) |
Microtus californicus |
GCA_028537955.1_mMicCal1.0.hap1 |
350 |
2,299,490,594 |
51 |
5,100 |
42.37 |
41 |
California vole (kernensis MVZ Mamm 240107 alternate hap 2023) |
Microtus californicus |
GCA_028537755.1_mMicCal1.0.hap2 |
310 |
2,142,917,481 |
43 |
4,300 |
33.13 |
42 |
gopher snake (HBS135680 alternate hap 2023) |
Pituophis catenifer annectens |
GCA_029215685.1_rPitCat1.0.hap2 |
649 |
1,682,881,129 |
584 |
58,400 |
45.94 |
43 |
gopher snake (HBS135680 primary hap 2023) |
Pituophis catenifer annectens |
GCA_029215655.1_rPitCat1.0.hap1 |
426 |
1,749,255,673 |
603 |
60,300 |
45.41 |
44 |
interior live oak (QUWIS_CCGP_1 alternate hap 2022) |
Quercus wislizeni |
GCA_023055485.1_dhQueWisl1.0.a |
689 |
768,449,301 |
82 |
8,200 |
38.05 |
45 |
interior live oak (QUWIS_CCGP_1 primary hap 2022) |
Quercus wislizeni |
GCA_023055345.1_dhQueWisl1.0.p |
358 |
724,823,050 |
81 |
8,100 |
36.98 |
46 |
island oak (RSA801373 alternate hap 2023) |
Quercus tomentella |
GCA_028535165.1_dhQueTome1.0.hap2 |
156 |
774,886,980 |
53 |
5,300 |
38.57 |
47 |
island oak (RSA801373 primary hap 2023) |
Quercus tomentella |
GCA_028535515.1_dhQueTome1.0.hap1 |
274 |
780,705,769 |
53 |
5,300 |
38.97 |
48 |
little pocket mouse (longimembris alternate hap 2022) |
Perognathus longimembris |
GCA_024363435.1_mPerLon1.0.a |
718 |
2,257,225,505 |
229 |
22,900 |
43.22 |
49 |
little pocket mouse (longimembris primary hap 2022) |
Perognathus longimembris |
GCA_024363575.1_mPerLon1.0.p |
1,135 |
2,346,747,858 |
215 |
21,500 |
43.76 |
50 |
longjawed orb weaver (CCGP_RG_IND1 alternate hap 2022) |
Tetragnatha versicolor |
GCA_024610695.1_qqTetVers1.0.a |
539 |
1,039,239,443 |
122 |
12,200 |
52.64 |
51 |
longjawed orb weaver (CCGP_RG_IND1 primary hap 2022) |
Tetragnatha versicolor |
GCA_024610705.1_qqTetVers1.0.p |
174 |
1,068,088,609 |
127 |
12,700 |
52.58 |
52 |
Merriam's kangaroo rat (MVZ:Mamm:240054 alternate hap 2022) |
Dipodomys merriami |
GCA_024711525.1_mDipMer1.0.a |
3,482 |
2,921,273,682 |
181 |
18,100 |
53.95 |
53 |
Merriam's kangaroo rat (MVZ:Mamm:240054 primary hap 2022) |
Dipodomys merriami |
GCA_024711535.1_mDipMer1.0.p |
4,354 |
3,365,254,602 |
182 |
18,200 |
52.00 |
54 |
monkeyface prickleback (CVI_PGR_0920_01 alternate hap 2022) |
Cebidichthys violaceus |
GCA_023349535.1_fCebVio1.0.a |
486 |
606,177,218 |
927 |
92,700 |
27.32 |
55 |
monkeyface prickleback (CVI_PGR_0920_01 primary hap 2022) |
Cebidichthys violaceus |
GCA_023349555.1_fCebVio1.0.p |
725 |
575,660,146 |
936 |
93,600 |
27.15 |
56 |
North American deer mouse (MVZ:Mamm:240117 alternate hap 2022) |
Peromyscus maniculatus sonoriensis |
GCA_026167925.1_mPerMan1.0.a |
1,006 |
2,625,495,359 |
229 |
22,900 |
37.61 |
57 |
North American deer mouse (MVZ:Mamm:240117 primary hap 2022) |
Peromyscus maniculatus sonoriensis |
GCA_026229955.1_mPerMan1.0.p |
1,838 |
2,847,741,276 |
244 |
24,400 |
48.05 |
58 |
northern elephant seal (CCGP_5_RB_7025 alternate hap 2023) |
Mirounga angustirostris |
GCA_029215635.1_mMirAng1.0.hap2 |
422 |
2,451,151,009 |
60 |
6,000 |
35.48 |
59 |
northern elephant seal (CCGP_5_RB_7025 primary hap 2023) |
Mirounga angustirostris |
GCA_029215605.1_mMirAng1.0.hap1 |
498 |
2,430,321,998 |
98 |
9,800 |
35.33 |
60 |
northern rubber boa (HBS 135849 alternate hap 2022) |
Charina bottae |
GCA_023362785.1_rChaBot1.0.a |
224 |
1,703,974,979 |
84 |
8,400 |
42.47 |
61 |
northern rubber boa (HBS 135849 primary hap 2022) |
Charina bottae |
GCA_023362775.1_rChaBot1.0.p |
289 |
1,804,939,834 |
85 |
8,500 |
42.87 |
62 |
Northwestern pond turtle (WTP2003 alternate hap 2022) |
Actinemys marmorata |
GCA_022086895.1_rActMar1.a |
2,508 |
2,209,870,670 |
1,800 |
180,000 |
48.91 |
63 |
Northwestern pond turtle (WTP2003 primary hap 2022) |
Actinemys marmorata |
GCA_022086475.1_rActMar1.p |
48 |
2,301,118,547 |
148 |
14,823 |
48.89 |
64 |
puma (L17-30 alternate hap 2023) |
Puma concolor |
GCA_028749965.1_mPumCon1.0.hap2 |
208 |
2,496,324,563 |
96 |
9,600 |
35.10 |
65 |
puma (L17-30 primary hap 2023) |
Puma concolor |
GCA_028749985.1_mPumCon1.0.hap1 |
256 |
2,373,442,513 |
134 |
13,400 |
34.72 |
66 |
red abalone (VD_foot alternate hap 2022) |
Haliotis rufescens |
GCA_023055495.1_xgHalRufe1.0.a |
362 |
1,379,205,445 |
132 |
13,200 |
40.10 |
67 |
red abalone (VD_foot primary hap 2022) |
Haliotis rufescens |
GCF_023055435.1_xgHalRufe1.0.p |
615 |
1,334,454,214 |
154 |
15,400 |
36.48 |
68 |
Ringneck snake (HBS135679 primary hap 2022) |
Diadophis punctatus similis |
GCA_023053685.1_rDiaPun1.0.p |
444 |
1,783,023,707 |
723 |
72,300 |
48.68 |
69 |
sage sparrow (canescens MVZ Bird 192114 alternate hap 2022) |
Artemisiospiza belli |
GCA_021966175.1_bArtBel1.0.a |
43,035 |
2,257,281,749 |
12 |
1,212 |
43.91 |
70 |
sage sparrow (canescens MVZ Bird 192114 primary hap 2022) |
Artemisiospiza belli |
GCA_021963965.1_bArtBel1.0.p |
1,339 |
1,401,818,823 |
200 |
20,046 |
36.19 |
71 |
San Diegan legless lizard (HBS135921 alternate hap 2023) |
Anniella stebbinsi |
GCA_029215795.1_rAnnSte1.0.hap2 |
91 |
1,891,076,299 |
31 |
3,100 |
39.31 |
72 |
San Diegan legless lizard (HBS135921 primary hap 2023) |
Anniella stebbinsi |
GCA_029215775.1_rAnnSte1.0.hap1 |
134 |
1,890,507,581 |
21 |
2,100 |
39.04 |
73 |
San Diegan tiger whiptail (HBS 135688 alternate hap 2022) |
Aspidoscelis tigris stejnegeri |
GCA_023333555.1_rAspTig1.0.a |
227 |
1,675,887,475 |
44 |
4,400 |
39.22 |
74 |
San Diegan tiger whiptail (HBS 135688 primary hap 2022) |
Aspidoscelis tigris stejnegeri |
GCA_023333525.1_rAspTig1.0.p |
74 |
1,335,668,279 |
39 |
3,900 |
36.99 |
75 |
San Diego alligator lizard (HBS135686 alternate hap 2022) |
Elgaria multicarinata webbii |
GCA_023053675.1_rElgMul1.0.a |
627 |
1,810,359,265 |
27 |
2,700 |
40.46 |
76 |
San Diego alligator lizard (HBS135686 primary hap 2022) |
Elgaria multicarinata webbii |
GCA_023053635.1_rElgMul1.0.p |
85 |
1,790,509,355 |
23 |
2,300 |
40.44 |
77 |
San Diego ringneck snake (HBS135679 alternate hap 2022) |
Diadophis punctatus similis |
GCA_023053665.1_rDiaPun1.0.a |
2,064 |
1,577,714,162 |
572 |
57,200 |
50.64 |
78 |
sandblossoms (Phelan CA IGA184 alternate hap 2022) |
Linanthus parryae |
GCA_023055565.1_ddLinParr1.0.a |
581 |
1,755,725,946 |
149 |
14,900 |
54.25 |
79 |
sandblossoms (Phelan CA IGA184 primary hap 2022) |
Linanthus parryae |
GCA_023055425.1_ddLinParr1.0.p |
123 |
1,514,492,808 |
85 |
8,500 |
49.92 |
80 |
Savannah sparrow (FMNH 499929 alternate hap 2022) |
Passerculus sandwichensis alaudinus |
GCA_022578375.1_bPasSan1.0.a |
29,743 |
1,785,383,892 |
1,822 |
182,214 |
28.02 |
81 |
Savannah sparrow (FMNH 499929 primary hap 2022) |
Passerculus sandwichensis alaudinus |
GCA_022577445.1_bPasSan1.0.p |
337 |
1,152,292,115 |
339 |
33,925 |
24.47 |
82 |
song sparrow (gouldii PMB2087b alternate hap 2022) |
Melospiza melodia |
GCA_022749775.1_bMelMel1.0.a |
34,688 |
1,938,102,026 |
5 |
505 |
40.27 |
83 |
song sparrow (gouldii PMB2087b primary hap 2022) |
Melospiza melodia |
GCA_022749695.1_bMelMel1.0.p |
501 |
1,356,304,709 |
323 |
32,321 |
34.69 |
84 |
Southern Pacific rattlesnake (HBS135844 alternate hap 2022) |
Crotalus helleri |
GCA_024509165.1_rCroOre1.a |
340 |
1,628,461,744 |
34 |
782 |
44.44 |
85 |
Southern Pacific rattlesnake (HBS135844 primary hap 2022) |
Crotalus helleri |
GCA_024509115.1_rCroOre1.0.p |
696 |
1,564,714,769 |
443 |
221,500 |
44.94 |
86 |
Southwestern pond turtle (HBS135687 alternate hap 2022) |
Actinemys pallida |
GCA_023634275.1_rActPal1.0.a |
260 |
2,348,990,949 |
64 |
6,400 |
36.29 |
87 |
Southwestern pond turtle (HBS135687 primary hap 2022) |
Actinemys pallida |
GCA_023634205.1_rActPal1.0.p |
53 |
2,326,928,347 |
53 |
5,300 |
36.13 |
88 |
starburst anemone (CCGP_MDBC_AS_20200803 alternate hap 2022) |
Anthopleura sola |
GCA_023349385.1_jaAntSola1.0.a |
556 |
299,691,816 |
110 |
11,000 |
35.34 |
89 |
starburst anemone (CCGP_MDBC_AS_20200803 primary hap 2022) |
Anthopleura sola |
GCA_023349425.1_jaAntSola1.0.p |
270 |
288,970,335 |
98 |
9,800 |
34.21 |
90 |
starfish (M0D059179O alternate hap 2022) |
Pisaster brevispinus |
GCA_023634265.1_eaPisBrev1.0.a |
126 |
505,327,659 |
144 |
14,408 |
35.49 |
91 |
starfish (M0D059179O primary hap 2022) |
Pisaster brevispinus |
GCA_023634235.1_eaPisBrev1.0.p |
513 |
549,802,912 |
170 |
17,001 |
37.24 |
92 |
Steller's jay (frontalis alternate hap 2022) |
Cyanocitta stelleri |
GCA_026168045.1_bCyaSte1.0.a |
957 |
1,177,494,911 |
200 |
20,000 |
27.12 |
93 |
Steller's jay (frontalis primary hap 2022) |
Cyanocitta stelleri |
GCA_026167965.1_bCyaSte1.0.p |
352 |
1,162,964,953 |
223 |
22,300 |
23.69 |
94 |
tidewater goby (DKJ021-1_F 2022) |
Eucyclogobius newberryi |
GCA_026437355.1_fEucNew1.0.hap2 |
755 |
913,837,424 |
894 |
89,400 |
47.96 |
95 |
tidewater goby (DKJ021-1_F 2022) |
Eucyclogobius newberryi |
GCA_026437365.1_fEucNew1.0.hap1 |
820 |
984,795,555 |
794 |
79,400 |
49.87 |
96 |
Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022) |
Corynorhinus townsendii |
GCA_026230055.1_mCorTow1.0.hap1 |
391 |
2,104,912,948 |
219 |
21,900 |
37.42 |
97 |
Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022) |
Corynorhinus townsendii |
GCA_026230045.1_mCorTow1.0.hap2 |
182 |
1,961,562,149 |
217 |
21,700 |
36.37 |
98 |
toyon (HeAr 88 alternate hap 2022) |
Heteromeles arbutifolia |
GCA_024363235.1_drHetArbu1.0.a |
75 |
638,231,885 |
11 |
1,100 |
40.23 |
99 |
toyon (HeAr 88 primary hap 2022) |
Heteromeles arbutifolia |
GCA_024362995.1_drHetArbu1.0.p |
118 |
634,784,569 |
5 |
500 |
39.87 |
100 |
tricolored blackbird (1412-34295 alternate hap 2022) |
Agelaius tricolor |
GCA_023055385.1_bAgeTri1.0.a |
450 |
1,142,379,013 |
97 |
9,700 |
25.05 |
101 |
tricolored blackbird (1412-34295 primary hap 2022) |
Agelaius tricolor |
GCA_023055355.1_bAgeTri1.0.p |
214 |
1,157,608,456 |
97 |
9,700 |
23.38 |
102 |
valley gartersnake (HBS 135685 alternate hap 2023) |
Thamnophis sirtalis fitchi |
GCA_029207655.1_rThaSir1.0.hap2 |
226 |
1,683,046,358 |
403 |
40,300 |
45.12 |
103 |
valley gartersnake (HBS 135685 primary hap 2023) |
Thamnophis sirtalis fitchi |
GCA_029207665.1_rThaSir1.0.hap1 |
413 |
1,621,019,271 |
446 |
44,600 |
46.30 |
104 |
Van Houtte's columbine (alt alternate hap PFEx6 2022) |
Aquilegia eximia |
GCA_023053535.1_dmAquExim1.0.a |
249 |
365,822,783 |
63 |
6,300 |
42.29 |
105 |
Van Houtte's columbine (PFEx6 primary hap 2022) |
Aquilegia eximia |
GCA_023053565.1_dmAquExim1.0.p |
463 |
367,332,980 |
62 |
6,200 |
41.60 |
106 |
vernal pool fairy shrimp B.lindahli (BRLI_1 2022) |
Branchinecta lindahli |
GCA_023053555.1_BRLI_1.1 |
55 |
384,837,704 |
241 |
24,100 |
45.07 |
107 |
vernal pool fairy shrimp B.lynchi (BRLY_001 2022) |
Branchinecta lynchi |
GCA_023053575.1_BRLY_1.1 |
217 |
575,750,106 |
1,087 |
108,700 |
52.44 |
108 |
vernal pool tadpole shrimp L.packardi (LEPA_1 2022) |
Lepidurus packardi |
GCA_023053545.1_LEPA1.1 |
355 |
108,645,424 |
89 |
8,900 |
23.14 |
109 |
Virginia rail (171378401 alternate hap 2022) |
Rallus limicola |
GCA_022605895.1_bRalLim1.0.a |
4,450 |
1,425,697,905 |
668 |
66,800 |
32.20 |
110 |
Virginia rail (171378401 primary hap 2022) |
Rallus limicola |
GCA_022605955.1_bRalLim1.0.p |
1,102 |
1,395,598,026 |
197 |
19,704 |
32.38 |
111 |
western fence lizard (IW3139 2022) |
Sceloporus occidentalis |
GCA_023333635.1_rSceOcc1.0.a |
1,771 |
3,186,658,811 |
51 |
5,100 |
40.63 |
112 |
western fence lizard (IW3139 primary hap 2022) |
Sceloporus occidentalis |
GCA_023333645.1_rSceOcc1.0.p |
608 |
2,856,356,971 |
51 |
5,100 |
37.86 |
113 |
western red-tailed skink (HBS 135693 alternate hap 2022) |
Plestiodon gilberti rubricaudatus |
GCA_026170595.1_rPleGil1.0.hap2 |
39 |
1,571,222,493 |
15 |
1,500 |
36.98 |
114 |
western red-tailed skink (HBS 135693 primary hap 2022) |
Plestiodon gilberti rubricaudatus |
GCA_026170395.1_rPleGil1.0.hap1 |
50 |
1,447,229,999 |
12 |
1,200 |
37.05 |
115 |
western scrub-jay (CA MVZ Bird 193978 2023) |
Aphelocoma californica |
GCA_028536645.1_bAphCal1.0.hap2 |
1,631 |
1,191,279,315 |
168 |
16,800 |
27.56 |
116 |
western scrub-jay (CA MVZ Bird 193978 2023) |
Aphelocoma californica |
GCA_028536675.1_bAphCal1.0.hap1 |
1,393 |
1,348,500,425 |
272 |
27,200 |
32.03 |
117 |
western spadefoot toad (HBS 135690 2023) |
Spea hammondii |
GCA_029215705.1_aSpeHam1.0.hap1 |
479 |
1,142,014,214 |
198 |
19,800 |
41.85 |
118 |
western spadefoot toad (HBS 135690 2023) |
Spea hammondii |
GCA_029215755.1_aSpeHam1.0.hap2 |
351 |
1,155,539,324 |
190 |
19,000 |
42.27 |
119 |
woolly sculpin (CAN_PGR_092001 alternate hap 2022) |
Clinocottus analis |
GCA_023055415.1_fCliAna1.0.a |
171 |
534,899,999 |
222 |
22,200 |
25.81 |
120 |
woolly sculpin (CAN_PGR_092001 primary hap 2022) |
Clinocottus analis |
GCA_023055335.1_fCliAna1.0.p |
443 |
538,118,947 |
219 |
21,900 |
25.91 |
121 |
wrentit (frontalis MVZ Bird 193981 alternate hap 2023) |
Chamaea fasciata |
GCA_029207785.1_bChaFas1.0.hap2 |
1,350 |
1,194,527,585 |
342 |
34,200 |
25.86 |
122 |
wrentit (frontalis MVZ Bird 193981 primary hap 2023) |
Chamaea fasciata |
GCA_029207755.1_bChaFas1.0.hap1 |
1,342 |
1,194,545,626 |
353 |
35,300 |
25.86 |
123 |
yellow warbler (LACM:Birds122168 alternate hap 2022) |
Setophaga petechia |
GCA_024372515.1_bSetPet1.0.a |
530 |
1,249,765,916 |
246 |
24,600 |
28.85 |
124 |
yellow warbler (LACM:Birds122168 primary hap 2022) |
Setophaga petechia |
GCA_024362935.1_bSetPet1.0.p |
687 |
1,222,385,072 |
284 |
28,400 |
26.21 |
125 |
Yuma myotis (MYYU_CA2020_CCGP alternate hap 2023) |
Myotis yumanensis |
GCA_028536395.1_mMyoYum1.0.hap2 |
250 |
2,050,521,808 |
215 |
21,500 |
37.27 |
126 |
Yuma myotis (MYYU_CA2020_CCGP primary hap 2023) |
Myotis yumanensis |
GCA_028538775.1_mMyoYum1.0.hap1 |
476 |
1,952,500,671 |
209 |
20,900 |
36.36 |