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Assemblies from NCBI/Genbank/Refseq sources, subset of bacteria only.
| count | common name link to genome browser |
ncbiRefSeq | xenoRefGene | augustus genes |
Ensembl genes |
gc5 base | gaps | assembly sequences |
Repeat Masker |
TRF simpleRepeat |
window Masker |
cpg islands |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 'Bacillus of abortion' Bang 1897 (544 2013) GCF_000369945.1 |
n/a | n/a | n/a | n/a | 57.21 (99.78 %) |
7 (0.22 %) |
10 (99.78 %) |
n/a | 79 (0.20 %) |
17,213 (9.66 %) |
3 (99.97 %) |
| 2 | Acetivibrio thermocellus DSM 2360 (LQRI 2016) GCF_001692755.1 |
n/a | n/a | n/a | n/a | 39.15 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 396 (1.14 %) |
21,447 (13.15 %) |
116 (1.71 %) |
| 3 | Acinetobacter baumannii (17978UN 2021) GCF_019356215.1 |
n/a | n/a | n/a | n/a | 38.90 (100.00 %) |
n/a | 4 (100.00 %) |
n/a | 112 (0.39 %) |
23,675 (11.89 %) |
55 (1.10 %) |
| 4 | Acinetobacter baumannii (AB5075-UW 2015) GCF_000963815.1 |
n/a | n/a | n/a | n/a | 39.02 (100.00 %) |
n/a | 4 (100.00 %) |
n/a | 89 (0.44 %) |
23,479 (11.71 %) |
53 (1.14 %) |
| 5 | Acinetobacter baumannii (ATCC 17978 2007) GCF_000015425.1 |
n/a | n/a | n/a | n/a | 38.92 (100.00 %) |
1 (0.00 %) |
4 (100.00 %) |
n/a | 105 (0.19 %) |
23,238 (11.86 %) |
50 (1.04 %) |
| 6 | Acinetobacter baumannii (ATCC 17978 2021) GCA_902728005.1 |
n/a | n/a | n/a | n/a | 38.90 (100.00 %) |
n/a | 4 (100.00 %) |
n/a | 115 (0.39 %) |
22,872 (11.47 %) |
53 (1.10 %) |
| 7 | Acinetobacter baumannii (ATCC 17978-mff 2015) GCF_001077675.1 |
n/a | n/a | n/a | n/a | 38.95 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 104 (0.39 %) |
23,205 (11.83 %) |
51 (1.07 %) |
| 8 | Acinetobacter baumannii (ATCC 19606 2016) GCA_900011295.1 |
n/a | n/a | n/a | n/a | 39.06 (99.99 %) |
2 (0.00 %) |
116 (100.00 %) |
n/a | 134 (0.56 %) |
22,549 (11.48 %) |
46 (0.85 %) |
| 9 | Actinobacillus pleuropneumoniae serovar 5b (L20 2007) GCA_000015885.1 |
n/a | n/a | n/a | n/a | 41.30 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 62 (0.39 %) |
11,379 (9.68 %) |
0 (0.00 %) |
| 10 | Aeromonas hydrophila subsp. hydrophila (ATCC 7966 2006) GCF_000014805.1 |
n/a | n/a | n/a | n/a | 61.55 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 155 (0.74 %) |
38,147 (17.15 %) |
1 (100.00 %) |
| 11 | Allokutzneria albata (DSM 44149 2016) GCF_900103775.1 |
n/a | n/a | n/a | n/a | 70.26 (100.00 %) |
1 (0.00 %) |
1 (100.00 %) |
n/a | 451 (0.41 %) |
77,239 (22.27 %) |
1 (100.00 %) |
| 12 | Anaplasma centrale str. (Israel 2009) GCF_000024505.1 |
n/a | n/a | n/a | n/a | 49.98 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 42 (0.53 %) |
1,912 (2.27 %) |
367 (40.51 %) |
| 13 | Anaplasma marginale (Palmeira 2018) GCA_003515675.1 |
n/a | n/a | n/a | n/a | 49.76 (99.98 %) |
1,011 (0.15 %) |
1,011 (99.85 %) |
n/a | 63 (1.23 %) |
2,330 (2.87 %) |
348 (41.50 %) |
| 14 | Anaplasma marginale str. (Florida 2009) GCF_000020305.1 |
n/a | n/a | n/a | n/a | 49.77 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 62 (1.39 %) |
2,436 (3.07 %) |
340 (44.31 %) |
| 15 | Anaplasma marginale str. (St. Maries 2004) GCF_000011945.1 |
n/a | n/a | n/a | n/a | 49.76 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 57 (0.92 %) |
2,261 (2.83 %) |
318 (44.56 %) |
| 16 | Anaplasma marginale str. (St. Maries 2011) GCF_000215525.1 |
n/a | n/a | n/a | n/a | 49.79 (99.99 %) |
n/a | 60 (100.00 %) |
n/a | 40 (0.19 %) |
2,461 (3.08 %) |
314 (44.94 %) |
| 17 | Anaplasma phagocytophilum str. (HGE1 2013) GCA_000478425.1 |
n/a | n/a | n/a | n/a | 41.63 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 81 (1.57 %) |
2,625 (6.01 %) |
23 (0.57 %) |
| 18 | Anaplasma phagocytophilum str. (Webster 2015) GCF_000964685.1 |
n/a | n/a | n/a | n/a | 41.64 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 107 (2.61 %) |
2,352 (6.01 %) |
25 (0.59 %) |
| 19 | Arthrobacter sp. SLBN-53 (NRRL B-3805 2016) GCA_001580405.1 |
n/a | n/a | n/a | n/a | 66.89 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 424 (0.41 %) |
44,060 (18.81 %) |
1 (100.00 %) |
| 20 | Bacillus anthracis str. 'Ames Ancestor' (Ames Ancestor; A2084 2004) GCF_000008445.1 |
n/a | n/a | n/a | n/a | 35.24 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 321 (0.49 %) |
37,990 (15.20 %) |
28 (1.14 %) |
| 21 | Bacillus mojavensis (PS17 2020) GCA_016413745.1 |
n/a | n/a | n/a | n/a | 43.87 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 75 (0.20 %) |
23,826 (11.33 %) |
197 (2.85 %) |
| 22 | Bacillus subtilis (NCD-2 2017) GCA_002556525.1 |
n/a | n/a | n/a | n/a | 43.53 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 64 (0.12 %) |
23,678 (11.00 %) |
227 (3.62 %) |
| 23 | Bacillus subtilis strain 168 GCF_000009045.1 |
n/a | n/a | n/a | n/a | 43.51 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 55 (0.10 %) |
23,994 (11.04 %) |
232 (3.62 %) |
| 24 | bacteria G.metallireducens (GS-15 2005) GCF_000012925.1 |
n/a | n/a | n/a | n/a | 59.49 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 113 (0.38 %) |
20,436 (9.05 %) |
4 (99.94 %) |
| 25 | bacteria L.abararensis (201903074 2021) GCF_016918735.1 |
n/a | n/a | n/a | n/a | 39.09 (100.00 %) |
n/a | 66 (100.00 %) |
n/a | 36 (0.07 %) |
33,364 (16.57 %) |
48 (0.37 %) |
| 26 | bacteria L.adleri (FH2-B-D1 2017) GCF_002811985.1 |
n/a | n/a | n/a | n/a | 43.55 (99.99 %) |
3 (0.00 %) |
170 (100.00 %) |
n/a | 107 (0.36 %) |
42,188 (18.59 %) |
30 (0.34 %) |
| 27 | bacteria L.ainazelensis (201903071 2021) GCF_016918785.1 |
n/a | n/a | n/a | n/a | 42.61 (100.00 %) |
n/a | 94 (100.00 %) |
n/a | 150 (0.56 %) |
42,015 (18.64 %) |
29 (0.21 %) |
| 28 | bacteria L.ainlahdjerensis (201903070 2021) GCF_016919175.1 |
n/a | n/a | n/a | n/a | 42.54 (100.00 %) |
n/a | 88 (100.00 %) |
n/a | 115 (0.40 %) |
42,317 (18.88 %) |
41 (0.35 %) |
| 29 | bacteria L.alexanderi serovar Manhao 3 str. (L 60 2013) GCF_000243815.2 |
n/a | n/a | n/a | n/a | 40.20 (100.00 %) |
8 (0.00 %) |
73 (100.00 %) |
n/a | 115 (0.36 %) |
34,309 (17.25 %) |
14 (0.15 %) |
| 30 | bacteria L.alstonii serovar Sichuan str. (79601 2013) GCF_000347175.1 |
n/a | n/a | n/a | n/a | 42.48 (99.99 %) |
n/a | 125 (100.00 %) |
n/a | 105 (0.31 %) |
36,409 (17.07 %) |
16 (0.22 %) |
| 31 | bacteria L.andrefontaineae (201800301 2019) GCF_004770105.1 |
n/a | n/a | n/a | n/a | 39.93 (100.00 %) |
n/a | 30 (100.00 %) |
n/a | 33 (0.15 %) |
31,701 (14.50 %) |
40 (0.37 %) |
| 32 | bacteria L.bandrabouensis (201601109 2019) GCF_004770555.1 |
n/a | n/a | n/a | n/a | 37.74 (100.00 %) |
n/a | 31 (100.00 %) |
n/a | 37 (0.05 %) |
34,476 (17.58 %) |
39 (0.37 %) |
| 33 | bacteria L.barantonii (FH4-C-A1 2017) GCF_002811925.1 |
n/a | n/a | n/a | n/a | 43.96 (100.00 %) |
n/a | 17 (100.00 %) |
n/a | 45 (0.10 %) |
38,525 (18.03 %) |
2 (0.11 %) |
| 34 | bacteria L.biflexa serovar strain 'Patoc (Patoc 1 Paris 2008) GCF_000017685.1 |
n/a | n/a | n/a | n/a | 38.89 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 41 (0.06 %) |
32,819 (17.62 %) |
57 (0.64 %) |
| 35 | bacteria L.borgpetersenii serovar Ceylonica (Piyasena 2018) GCF_003516145.1 |
n/a | n/a | n/a | n/a | 40.09 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 94 (0.29 %) |
32,972 (17.71 %) |
4 (0.06 %) |
| 36 | bacteria L.bourretii (201800267 2019) GCF_004770145.1 |
n/a | n/a | n/a | n/a | 38.24 (100.00 %) |
n/a | 28 (100.00 %) |
n/a | 44 (0.14 %) |
35,124 (17.99 %) |
40 (0.37 %) |
| 37 | bacteria L.bouyouniensis (201800295 2019) GCF_004770625.1 |
n/a | n/a | n/a | n/a | 37.10 (100.00 %) |
n/a | 23 (100.00 %) |
n/a | 48 (0.08 %) |
34,160 (17.72 %) |
26 (0.33 %) |
| 38 | bacteria L.brenneri (201800277 2019) GCF_004769295.1 |
n/a | n/a | n/a | n/a | 38.46 (100.00 %) |
n/a | 14 (100.00 %) |
n/a | 29 (0.05 %) |
32,156 (17.18 %) |
30 (0.33 %) |
| 39 | bacteria L.broomii serovar Hurstbridge str. (5399 2013) GCF_000243715.2 |
n/a | n/a | n/a | n/a | 42.99 (100.00 %) |
n/a | 12 (100.00 %) |
n/a | 61 (0.20 %) |
27,922 (12.01 %) |
9 (0.06 %) |
| 40 | bacteria L.chreensis (201903075 2021) GCF_016919165.1 |
n/a | n/a | n/a | n/a | 39.77 (100.00 %) |
n/a | 80 (100.00 %) |
n/a | 50 (0.10 %) |
35,979 (16.47 %) |
79 (0.53 %) |
| 41 | bacteria L.cinconiae (WS58.C1 2024) GCF_040833995.1 |
n/a | n/a | n/a | n/a | 41.76 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 61 (0.25 %) |
31,019 (14.89 %) |
62 (0.64 %) |
| 42 | bacteria L.congkakensis (201702421 2019) GCF_004770265.1 |
n/a | n/a | n/a | n/a | 38.23 (100.00 %) |
n/a | 24 (100.00 %) |
n/a | 48 (0.09 %) |
33,553 (17.72 %) |
25 (0.23 %) |
| 43 | bacteria L.dzoumogneensis (201601113 2019) GCF_004770895.1 |
n/a | n/a | n/a | n/a | 40.99 (100.00 %) |
n/a | 28 (100.00 %) |
n/a | 44 (0.12 %) |
31,764 (15.17 %) |
89 (0.68 %) |
| 44 | bacteria L.ellinghausenii (E18 2018) GCF_003114815.1 |
n/a | n/a | n/a | n/a | 37.35 (100.00 %) |
1 (0.00 %) |
28 (100.00 %) |
n/a | 46 (0.05 %) |
34,431 (17.28 %) |
14 (0.18 %) |
| 45 | bacteria L.fainei serovar Hurstbridge str. (BUT 6 2013) GCF_000306235.2 |
n/a | n/a | n/a | n/a | 43.53 (100.00 %) |
n/a | 13 (100.00 %) |
n/a | 52 (0.16 %) |
27,370 (12.02 %) |
10 (0.10 %) |
| 46 | bacteria L.fletcheri (SSW15 2019) GCF_004769195.1 |
n/a | n/a | n/a | n/a | 47.35 (100.00 %) |
n/a | 14 (100.00 %) |
n/a | 44 (0.12 %) |
28,297 (14.77 %) |
5 (0.14 %) |
| 47 | bacteria L.fluminis (SCS5 2019) GCF_004771275.1 |
n/a | n/a | n/a | n/a | 47.70 (100.00 %) |
n/a | 18 (100.00 %) |
n/a | 32 (0.08 %) |
28,752 (15.06 %) |
4 (0.26 %) |
| 48 | bacteria L.gomenensis (201800299 2019) GCF_004770155.1 |
n/a | n/a | n/a | n/a | 46.13 (100.00 %) |
n/a | 96 (100.00 %) |
n/a | 158 (0.47 %) |
35,209 (16.86 %) |
40 (0.69 %) |
| 49 | bacteria L.haakeii (ATI7-C-A2 2017) GCF_002812225.1 |
n/a | n/a | n/a | n/a | 39.81 (100.00 %) |
8 (0.00 %) |
37 (100.00 %) |
n/a | 36 (0.11 %) |
30,829 (14.47 %) |
37 (0.32 %) |
| 50 | bacteria L.harrisiae (FH2-B-A1 2017) GCF_002811945.1 |
n/a | n/a | n/a | n/a | 37.86 (99.99 %) |
1 (0.01 %) |
17 (100.00 %) |
n/a | 44 (0.06 %) |
33,435 (18.04 %) |
20 (0.24 %) |
| 51 | bacteria L.hartskeerlii (MCA2-B-A3 2017) GCF_002811475.1 |
n/a | n/a | n/a | n/a | 40.47 (100.00 %) |
2 (0.00 %) |
30 (100.00 %) |
n/a | 43 (0.18 %) |
30,024 (14.48 %) |
55 (0.54 %) |
| 52 | bacteria L.idonii (201300427 2019) GCF_004770995.1 |
n/a | n/a | n/a | n/a | 41.15 (100.00 %) |
n/a | 83 (100.00 %) |
n/a | 39 (0.17 %) |
31,508 (15.73 %) |
61 (0.48 %) |
| 53 | bacteria L.ilyithenensis (201400974 2019) GCF_004771005.1 |
n/a | n/a | n/a | n/a | 40.54 (100.00 %) |
n/a | 74 (100.00 %) |
n/a | 43 (0.21 %) |
33,614 (16.63 %) |
106 (0.87 %) |
| 54 | bacteria L.inadai serovar Lyme str. (10 2013) GCF_000243675.2 |
n/a | n/a | n/a | n/a | 44.61 (100.00 %) |
1 (0.00 %) |
28 (100.00 %) |
n/a | 168 (0.75 %) |
28,417 (12.44 %) |
11 (0.17 %) |
| 55 | bacteria L.interrogans serovar Copenhageni (FDAARGOS_203 2018) GCF_002073495.2 |
n/a | n/a | n/a | n/a | 35.04 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 230 (0.97 %) |
44,431 (24.35 %) |
18 (0.26 %) |
| 56 | bacteria L.jelokensis (201702419 2019) GCF_004769775.1 |
n/a | n/a | n/a | n/a | 38.90 (100.00 %) |
n/a | 45 (100.00 %) |
n/a | 42 (0.06 %) |
35,532 (18.49 %) |
39 (0.41 %) |
| 57 | bacteria L.johnsonii (E8 2018) GCF_003112675.1 |
n/a | n/a | n/a | n/a | 41.26 (100.00 %) |
n/a | 20 (100.00 %) |
n/a | 32 (0.16 %) |
30,291 (14.52 %) |
62 (0.60 %) |
| 58 | bacteria L.kanakyensis (201800292 2019) GCF_004769235.1 |
n/a | n/a | n/a | n/a | 38.50 (100.00 %) |
n/a | 28 (100.00 %) |
n/a | 50 (0.08 %) |
35,195 (18.13 %) |
20 (0.20 %) |
| 59 | bacteria L.kemamanensis (201702454 2019) GCF_004769665.1 |
n/a | n/a | n/a | n/a | 38.90 (100.00 %) |
n/a | 52 (100.00 %) |
n/a | 47 (0.09 %) |
31,344 (17.43 %) |
28 (0.32 %) |
| 60 | bacteria L.kirschneri serovar Cynopteri str. (3522 CT 2013) GCF_000243695.2 |
n/a | n/a | n/a | n/a | 35.92 (100.00 %) |
5 (0.00 %) |
29 (100.00 %) |
n/a | 192 (0.74 %) |
41,523 (23.21 %) |
21 (0.21 %) |
| 61 | bacteria L.kmetyi (LS 001/16 2018) GCF_003722295.1 |
n/a | n/a | n/a | n/a | 44.83 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 71 (0.25 %) |
40,144 (18.84 %) |
0 (0.00 %) |
| 62 | bacteria L.kobayashii (E30 2021) GCF_003114835.2 |
n/a | n/a | n/a | n/a | 40.69 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 41 (0.09 %) |
33,764 (16.19 %) |
107 (0.85 %) |
| 63 | bacteria L.koniambonensis (201800265 2019) GCF_004769555.1 |
n/a | n/a | n/a | n/a | 38.97 (100.00 %) |
n/a | 12 (100.00 %) |
n/a | 48 (0.13 %) |
33,271 (15.28 %) |
36 (0.28 %) |
| 64 | bacteria L.langatensis (SSW18 2019) GCF_004770615.1 |
n/a | n/a | n/a | n/a | 44.79 (100.00 %) |
n/a | 11 (100.00 %) |
n/a | 33 (0.10 %) |
28,769 (13.52 %) |
259 (2.26 %) |
| 65 | bacteria L.levettii (MCA2-B-A1 2017) GCF_002812085.1 |
n/a | n/a | n/a | n/a | 37.61 (100.00 %) |
1 (0.00 %) |
14 (100.00 %) |
n/a | 42 (0.07 %) |
31,876 (17.16 %) |
13 (0.19 %) |
| 66 | bacteria L.licerasiae (ATCC BAA-1110 2014) GCF_000526875.1 |
n/a | n/a | n/a | n/a | 41.13 (100.00 %) |
n/a | 25 (100.00 %) |
n/a | 47 (0.14 %) |
30,634 (14.21 %) |
76 (0.57 %) |
| 67 | bacteria L.limi (VSF25 2022) GCF_026151395.1 |
n/a | n/a | n/a | n/a | 37.54 (100.00 %) |
n/a | 24 (100.00 %) |
n/a | 51 (0.09 %) |
32,582 (17.46 %) |
23 (0.26 %) |
| 68 | bacteria L.mayottensis (200901116 2018) GCF_000306675.2 |
n/a | n/a | n/a | n/a | 39.57 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 97 (0.43 %) |
34,933 (17.69 %) |
29 (0.38 %) |
| 69 | bacteria L.meyeri (DSM 21537 2019) GCF_004368965.1 |
n/a | n/a | n/a | n/a | 38.00 (100.00 %) |
n/a | 16 (100.00 %) |
n/a | 49 (0.08 %) |
35,416 (17.98 %) |
45 (0.38 %) |
| 70 | bacteria L.montravelensis (201800278 2019) GCF_004770045.1 |
n/a | n/a | n/a | n/a | 37.48 (100.00 %) |
n/a | 24 (100.00 %) |
n/a | 39 (0.09 %) |
33,864 (17.97 %) |
32 (0.33 %) |
| 71 | bacteria L.mtsangambouensis (201601298 2019) GCF_004770475.1 |
n/a | n/a | n/a | n/a | 38.20 (100.00 %) |
n/a | 18 (100.00 %) |
n/a | 40 (0.07 %) |
34,907 (18.41 %) |
32 (0.31 %) |
| 72 | bacteria L.neocaledonica (ES4-C-A1 2017) GCF_002812205.1 |
n/a | n/a | n/a | n/a | 40.17 (99.99 %) |
2 (0.00 %) |
38 (100.00 %) |
n/a | 52 (0.16 %) |
32,229 (15.15 %) |
65 (0.52 %) |
| 73 | bacteria L.noguchii serovar Panama str. (CZ214 2013) GCF_000306255.2 |
n/a | n/a | n/a | n/a | 35.54 (100.00 %) |
n/a | 35 (100.00 %) |
n/a | 226 (0.68 %) |
45,225 (23.73 %) |
20 (0.24 %) |
| 74 | bacteria L.noumeaensis (201800287 2019) GCF_004770765.1 |
n/a | n/a | n/a | n/a | 38.29 (100.00 %) |
n/a | 40 (100.00 %) |
n/a | 38 (0.07 %) |
35,113 (18.23 %) |
35 (0.31 %) |
| 75 | bacteria L.ognonensis (201702476 2019) GCF_004770745.1 |
n/a | n/a | n/a | n/a | 39.66 (100.00 %) |
1 (0.00 %) |
62 (100.00 %) |
n/a | 36 (0.09 %) |
27,969 (14.21 %) |
86 (0.82 %) |
| 76 | bacteria L.paudalimensis (VSF14 2022) GCF_026151345.1 |
n/a | n/a | n/a | n/a | 37.42 (99.99 %) |
3 (0.01 %) |
5 (100.00 %) |
n/a | 50 (0.11 %) |
33,762 (17.40 %) |
25 (0.32 %) |
| 77 | bacteria L.perdikensis (201702692 2019) GCF_004769575.1 |
n/a | n/a | n/a | n/a | 38.50 (100.00 %) |
n/a | 21 (100.00 %) |
n/a | 48 (0.08 %) |
32,775 (17.19 %) |
32 (0.30 %) |
| 78 | bacteria L.perolatii (FH1-B-B1 2017) GCF_002811875.1 |
n/a | n/a | n/a | n/a | 42.36 (100.00 %) |
n/a | 49 (100.00 %) |
n/a | 64 (0.15 %) |
24,229 (11.31 %) |
111 (1.05 %) |
| 79 | bacteria L.ryugenii (YH101 2018) GCF_003114855.1 |
n/a | n/a | n/a | n/a | 39.92 (99.98 %) |
3 (0.02 %) |
24 (100.00 %) |
n/a | 47 (0.09 %) |
27,737 (14.08 %) |
39 (0.43 %) |
| 80 | bacteria L.saintgironsiae (FH4-C-A2 2017) GCF_002811765.1 |
n/a | n/a | n/a | n/a | 39.11 (100.00 %) |
n/a | 42 (100.00 %) |
n/a | 30 (0.11 %) |
30,359 (14.67 %) |
28 (0.26 %) |
| 81 | bacteria L.sanjuanensis (LGVF02 2022) GCF_022267325.1 |
n/a | n/a | n/a | n/a | 45.06 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 80 (0.31 %) |
36,944 (16.45 %) |
0 (0.00 %) |
| 82 | bacteria L.santarosai serovar Shermani str. (LT 821 2014) GCF_000313175.2 |
n/a | n/a | n/a | n/a | 41.82 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 129 (0.49 %) |
33,291 (17.61 %) |
0 (0.00 %) |
| 83 | bacteria L.sarikeiensis (201702455 2019) GCF_004769615.1 |
n/a | n/a | n/a | n/a | 40.27 (100.00 %) |
n/a | 44 (100.00 %) |
n/a | 50 (0.20 %) |
31,763 (14.10 %) |
63 (0.50 %) |
| 84 | bacteria L.selangorensis (SSW17 2019) GCF_004769405.1 |
n/a | n/a | n/a | n/a | 39.99 (100.00 %) |
n/a | 31 (100.00 %) |
n/a | 33 (0.11 %) |
31,465 (14.80 %) |
41 (0.33 %) |
| 85 | bacteria L.semungkisensis (SSS9 2019) GCF_004770055.1 |
n/a | n/a | n/a | n/a | 42.76 (100.00 %) |
n/a | 26 (100.00 %) |
n/a | 30 (0.11 %) |
26,444 (12.79 %) |
124 (1.13 %) |
| 86 | bacteria L.soteropolitanensis (VSF16 2022) GCF_026151335.1 |
n/a | n/a | n/a | n/a | 37.69 (99.99 %) |
n/a | 134 (100.00 %) |
n/a | 46 (0.11 %) |
33,611 (17.23 %) |
31 (0.36 %) |
| 87 | bacteria L.stimsonii (AMB6-RJ 2018) GCF_003545875.1 |
n/a | n/a | n/a | n/a | 42.65 (100.00 %) |
n/a | 23 (100.00 %) |
n/a | 121 (0.51 %) |
40,695 (18.09 %) |
22 (0.20 %) |
| 88 | bacteria L.terpstrae serovar Hualin str. ATCC 700639 (LT 11-33 2013) GCF_000332495.1 |
n/a | n/a | n/a | n/a | 38.21 (100.00 %) |
n/a | 23 (100.00 %) |
n/a | 38 (0.06 %) |
32,875 (16.82 %) |
45 (0.43 %) |
| 89 | bacteria L.tipperaryensis (GWTS#1 2016) GCF_001729245.1 |
n/a | n/a | n/a | n/a | 42.42 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 93 (0.42 %) |
40,390 (18.62 %) |
0 (0.00 %) |
| 90 | bacteria L.vanthielii (201601955 2019) GCF_004770365.1 |
n/a | n/a | n/a | n/a | 39.05 (100.00 %) |
n/a | 44 (100.00 %) |
n/a | 40 (0.09 %) |
32,685 (16.70 %) |
44 (0.38 %) |
| 91 | bacteria L.venezuelensis (CLM-U50 2017) GCF_002150035.1 |
n/a | n/a | n/a | n/a | 39.19 (100.00 %) |
n/a | 22 (100.00 %) |
n/a | 47 (0.16 %) |
31,562 (14.38 %) |
38 (0.35 %) |
| 92 | bacteria L.weilii (CUDO6 2019) GCF_006874765.1 |
n/a | n/a | n/a | n/a | 40.88 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 154 (0.72 %) |
34,455 (17.13 %) |
2 (0.02 %) |
| 93 | bacteria L.wolbachii serovar Codice str. (CDC 2013) GCF_000332515.2 |
n/a | n/a | n/a | n/a | 39.15 (100.00 %) |
n/a | 25 (100.00 %) |
n/a | 35 (0.13 %) |
31,364 (15.78 %) |
58 (0.55 %) |
| 94 | bacteria L.wolffii (201800291 2019) GCF_004770635.1 |
n/a | n/a | n/a | n/a | 45.95 (100.00 %) |
n/a | 20 (100.00 %) |
n/a | 35 (0.13 %) |
29,853 (13.61 %) |
7 (0.11 %) |
| 95 | bacteria L.yanagawae (201800272 2019) GCF_004769275.1 |
n/a | n/a | n/a | n/a | 38.26 (100.00 %) |
n/a | 30 (100.00 %) |
n/a | 46 (0.05 %) |
33,564 (17.83 %) |
18 (0.19 %) |
| 96 | bacteria L.yasudae (F1 2018) GCF_003545925.1 |
n/a | n/a | n/a | n/a | 45.49 (100.00 %) |
n/a | 25 (100.00 %) |
n/a | 82 (0.26 %) |
36,579 (16.34 %) |
15 (0.16 %) |
| 97 | Bdellovibrio bacteriovorus (HD100 2004) GCF_000196175.1 |
n/a | n/a | n/a | n/a | 50.65 (100.00 %) |
n/a | 11 (100.00 %) |
n/a | 71 (0.12 %) |
14,116 (6.35 %) |
2 (99.83 %) |
| 98 | Bordetella pertussis (H640 2019) GCF_004008975.1 |
n/a | n/a | n/a | n/a | 67.72 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 262 (1.08 %) |
29,312 (24.13 %) |
1 (100.00 %) |
| 99 | Brucella anthropi (PBO 2020) GCF_015326295.1 |
n/a | n/a | n/a | n/a | 56.11 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 54 (0.10 %) |
19,060 (6.82 %) |
3 (99.99 %) |
| 100 | Brucella canis (ATCC 23365 2007) GCF_000018525.1 |
n/a | n/a | n/a | n/a | 57.24 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 90 (0.15 %) |
16,838 (9.39 %) |
2 (99.97 %) |
| 101 | Brucella ceti (DDE002 2025) GCF_047324105.1 |
n/a | n/a | n/a | n/a | 57.20 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 92 (0.17 %) |
16,429 (9.16 %) |
2 (100.00 %) |
| 102 | Brucella ciceri (DSM 22292 2024) GCF_041930145.1 |
n/a | n/a | n/a | n/a | 57.74 (99.99 %) |
2 (0.00 %) |
44 (100.00 %) |
n/a | 104 (0.16 %) |
21,672 (8.57 %) |
43 (99.68 %) |
| 103 | Brucella cytisi (ESC1 2024) GCF_038433355.1 |
n/a | n/a | n/a | n/a | 55.52 (100.00 %) |
n/a | 55 (100.00 %) |
n/a | 68 (0.11 %) |
19,527 (6.67 %) |
55 (99.83 %) |
| 104 | Brucella daejeonensis (DSM 26944 2020) GCF_014199265.1 |
n/a | n/a | n/a | n/a | 58.49 (100.00 %) |
n/a | 55 (100.00 %) |
n/a | 141 (0.20 %) |
26,429 (10.70 %) |
56 (99.67 %) |
| 105 | Brucella endophytica (CGMCC 1.15082 2020) GCF_014640615.1 |
n/a | n/a | n/a | n/a | 60.73 (99.99 %) |
3 (0.00 %) |
83 (100.00 %) |
n/a | 157 (0.25 %) |
34,207 (14.25 %) |
81 (99.70 %) |
| 106 | Brucella gallinifaecis (ISO 196 2019) GCF_006476605.1 |
n/a | n/a | n/a | n/a | 50.98 (100.00 %) |
1 (0.00 %) |
38 (100.00 %) |
n/a | 77 (0.11 %) |
9,819 (4.34 %) |
43 (73.86 %) |
| 107 | Brucella grignonensis (OgA9a 2017) GCF_002252505.1 |
n/a | n/a | n/a | n/a | 54.15 (99.99 %) |
12 (0.00 %) |
181 (100.00 %) |
n/a | 52 (0.06 %) |
14,494 (5.15 %) |
166 (99.00 %) |
| 108 | Brucella haematophila (CCUG 38531 2019) GCF_005938105.1 |
n/a | n/a | n/a | n/a | 56.67 (100.00 %) |
n/a | 55 (100.00 %) |
n/a | 89 (0.08 %) |
25,599 (9.08 %) |
57 (99.87 %) |
| 109 | Brucella intermedia (NCTC12171 2018) GCF_900454225.1 |
n/a | n/a | n/a | n/a | 57.74 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 109 (0.26 %) |
22,125 (8.46 %) |
3 (99.98 %) |
| 110 | Brucella lupini (LUP21 2017) GCF_002252535.1 |
n/a | n/a | n/a | n/a | 56.35 (100.00 %) |
2 (0.00 %) |
67 (100.00 %) |
n/a | 68 (0.05 %) |
23,935 (8.11 %) |
64 (99.83 %) |
| 111 | Brucella melitensis bv. 1 str. (16M 2001) GCF_000007125.1 |
n/a | n/a | n/a | n/a | 57.22 (100.00 %) |
10 (0.00 %) |
12 (100.00 %) |
n/a | 89 (0.15 %) |
17,332 (9.71 %) |
2 (99.95 %) |
| 112 | Brucella microti (CCM 4915 2009) GCF_000022745.1 |
n/a | n/a | n/a | n/a | 57.25 (100.00 %) |
5 (0.00 %) |
7 (100.00 %) |
n/a | 117 (0.29 %) |
17,449 (9.65 %) |
2 (99.97 %) |
| 113 | Brucella neotomae (NCTC10084 2018) GCF_900446125.1 |
n/a | n/a | n/a | n/a | 57.23 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 88 (0.17 %) |
17,114 (9.49 %) |
3 (99.97 %) |
| 114 | Brucella oryzae (DSM 17471 2024) GCF_041929965.1 |
n/a | n/a | n/a | n/a | 56.17 (99.99 %) |
5 (0.01 %) |
89 (99.99 %) |
n/a | 77 (0.08 %) |
20,030 (7.47 %) |
78 (99.15 %) |
| 115 | Brucella ovis (ATCC 25840 2007) GCF_000016845.1 |
n/a | n/a | n/a | n/a | 57.19 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 75 (0.16 %) |
15,924 (9.29 %) |
2 (99.97 %) |
| 116 | Brucella pecoris (08RB2639 2019) GCF_006376675.1 |
n/a | n/a | n/a | n/a | 55.95 (100.00 %) |
n/a | 61 (100.00 %) |
n/a | 93 (0.09 %) |
19,689 (6.82 %) |
61 (99.82 %) |
| 117 | Brucella pituitosa (BU72 2017) GCF_002803535.1 |
n/a | n/a | n/a | n/a | 53.44 (99.98 %) |
12 (0.02 %) |
9 (100.00 %) |
n/a | 51 (0.05 %) |
14,215 (4.92 %) |
13 (98.55 %) |
| 118 | Brucella pseudintermedia (ASAG-D25 2022) GCF_025118245.1 |
n/a | n/a | n/a | n/a | 57.93 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 80 (0.11 %) |
22,420 (9.63 %) |
2 (100.00 %) |
| 119 | Brucella pseudogrignonensis (ESL2 2022) GCF_022024335.1 |
n/a | n/a | n/a | n/a | 53.87 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 78 (0.17 %) |
14,866 (5.02 %) |
3 (99.99 %) |
| 120 | Brucella rhizosphaerae (PR17 2017) GCF_002252475.1 |
n/a | n/a | n/a | n/a | 53.01 (100.00 %) |
n/a | 36 (100.00 %) |
n/a | 107 (0.14 %) |
13,240 (4.40 %) |
33 (99.78 %) |
| 121 | Brucella suis (1330 2005) GCF_000007505.1 |
n/a | n/a | n/a | n/a | 57.25 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 79 (0.13 %) |
16,976 (9.43 %) |
2 (99.97 %) |
| 122 | Brucella suis (ATCC 23445 2007) GCF_000018905.1 |
n/a | n/a | n/a | n/a | 57.21 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 106 (0.21 %) |
16,434 (9.10 %) |
2 (99.97 %) |
| 123 | Brucella thiophenivorans (DSM 7216 2017) GCF_002252445.1 |
n/a | n/a | n/a | n/a | 51.65 (100.00 %) |
2 (0.00 %) |
79 (100.00 %) |
n/a | 41 (0.06 %) |
12,078 (4.55 %) |
63 (92.86 %) |
| 124 | Brucella tritici (TA93 2019) GCF_008932285.1 |
n/a | n/a | n/a | n/a | 55.78 (100.00 %) |
n/a | 44 (100.00 %) |
n/a | 64 (0.13 %) |
18,403 (6.35 %) |
36 (96.28 %) |
| 125 | Burkholderia mallei (ATCC 23344 2023) GCF_033956065.1 |
n/a | n/a | n/a | n/a | 68.49 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 1,643 (1.42 %) |
61,717 (40.88 %) |
2 (100.00 %) |
| 126 | Burkholderia multivorans (ATCC 17616 2007) GCA_000018505.1 |
n/a | n/a | n/a | n/a | 66.69 (100.00 %) |
n/a | 4 (100.00 %) |
n/a | 769 (0.91 %) |
72,959 (35.08 %) |
4 (100.00 %) |
| 127 | Burkholderia pseudomallei (GTC3P0254T 2023) GCF_030297255.1 |
n/a | n/a | n/a | n/a | 68.25 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 2,049 (1.57 %) |
75,658 (42.05 %) |
2 (100.00 %) |
| 128 | Campylobacter jejuni subsp. jejuni ATCC 700819 (NCTC 11168 2003) GCF_000009085.1 |
n/a | n/a | n/a | n/a | 30.55 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 69 (0.33 %) |
16,429 (28.46 %) |
4 (0.22 %) |
| 129 | Candidatus Rickettsia colombianensi (Adcor 2 2018) GCF_003664375.1 |
n/a | n/a | n/a | n/a | 32.24 (100.00 %) |
n/a | 13 (100.00 %) |
n/a | 33 (0.49 %) |
7,501 (19.68 %) |
1 (0.03 %) |
| 130 | Candidatus Rickettsia kedanie (KNCP2-13 2024) GCF_045865205.1 |
n/a | n/a | n/a | n/a | 32.50 (99.99 %) |
n/a | 52 (100.00 %) |
n/a | 51 (0.23 %) |
10,785 (18.84 %) |
4 (0.15 %) |
| 131 | Candidatus Vesicomyosocius sp. (SY067_SCS001 2020) GCF_014706615.1 |
n/a | n/a | n/a | n/a | 31.16 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 62 (0.55 %) |
8,857 (17.90 %) |
3 (0.13 %) |
| 132 | Chlamydia trachomatis (L2/434/Bu 2008) GCF_000068585.1 |
n/a | n/a | n/a | n/a | 41.33 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 13 (0.14 %) |
5,126 (8.81 %) |
9 (0.47 %) |
| 133 | chlamydias (6BC 2011) GCF_000204255.1 |
n/a | n/a | n/a | n/a | 39.02 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 17 (0.15 %) |
6,260 (9.56 %) |
4 (0.13 %) |
| 134 | Clostridioides difficile (630 2017) GCF_000009205.2 |
n/a | n/a | n/a | n/a | 29.06 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 630 (1.16 %) |
38,168 (24.03 %) |
47 (0.94 %) |
| 135 | Clostridium beijerinckii (DSM 791 2021) GCF_018223745.1 |
n/a | n/a | n/a | n/a | 29.87 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 364 (0.57 %) |
50,825 (22.06 %) |
48 (0.88 %) |
| 136 | Clostridium butyricum (DSM 10702 2020) GCA_014131795.1 |
n/a | n/a | n/a | n/a | 28.74 (100.00 %) |
n/a | 4 (100.00 %) |
n/a | 297 (0.36 %) |
45,671 (25.32 %) |
37 (0.56 %) |
| 137 | Clostridium saccharoperbutylacetonicum N1-4HMT (ATCC 27021 2013) GCF_000334435.1 |
n/a | n/a | n/a | n/a | 29.43 (99.99 %) |
2 (0.00 %) |
212 (100.00 %) |
n/a | 401 (0.42 %) |
57,640 (22.92 %) |
7 (0.08 %) |
| 138 | Clostridium tyrobutyricum (KCTC 5387 2016 KAIST) GCF_001642655.1 |
n/a | n/a | n/a | n/a | 31.01 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 163 (0.26 %) |
27,424 (21.32 %) |
20 (0.48 %) |
| 139 | Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 DOE-JGI) GCF_000429805.1 |
n/a | n/a | n/a | n/a | 30.84 (99.97 %) |
1 (0.03 %) |
45 (99.97 %) |
n/a | 150 (0.23 %) |
26,457 (21.36 %) |
4 (0.08 %) |
| 140 | Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 Nanjing Univ. of Technology) GCF_000359585.1 |
n/a | n/a | n/a | n/a | 30.84 (100.00 %) |
n/a | 76 (100.00 %) |
n/a | 164 (0.26 %) |
26,260 (21.27 %) |
3 (0.08 %) |
| 141 | Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 Univ. Cattolica del Sacro Cuore) GCF_000392375.2 |
n/a | n/a | n/a | n/a | 30.82 (99.99 %) |
n/a | 174 (100.00 %) |
n/a | 142 (0.20 %) |
26,073 (21.16 %) |
5 (0.09 %) |
| 142 | Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2015 Tokyo Univ. Marine Science and Technology) GCA_000974305.1 |
n/a | n/a | n/a | n/a | 31.78 (99.94 %) |
7 (0.00 %) |
704 (100.00 %) |
n/a | 89 (0.14 %) |
20,221 (18.24 %) |
3 (0.09 %) |
| 143 | Companilactobacillus crustorum (MN047 2017) GCF_001951175.1 |
n/a | n/a | n/a | n/a | 35.08 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 53 (0.18 %) |
14,270 (12.47 %) |
10 (0.45 %) |
| 144 | Corynebacterium glutamicum (ATCC 13032 2004) GCA_000011325.1 |
n/a | n/a | n/a | n/a | 53.81 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 118 (0.18 %) |
8,376 (4.25 %) |
1 (99.99 %) |
| 145 | Coxiella burnetii (RSA 493 2016) GCF_000007765.2 |
n/a | n/a | n/a | n/a | 42.60 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 69 (0.32 %) |
12,401 (13.25 %) |
10 (0.32 %) |
| 146 | Cupriavidus necator (H16 2019) GCF_004798725.1 |
n/a | n/a | n/a | n/a | 66.34 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 321 (0.29 %) |
70,082 (25.88 %) |
3 (100.00 %) |
| 147 | cyanobacteria (ATCC 29133; PCC 73102 2008) GCF_000020025.1 |
n/a | n/a | n/a | n/a | 41.35 (100.00 %) |
n/a | 6 (100.00 %) |
n/a | 1,488 (1.72 %) |
39,950 (9.56 %) |
469 (2.37 %) |
| 148 | cyanobacteria (PCC 7942 2005) GCF_000012525.1 |
n/a | n/a | n/a | n/a | 55.43 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 26 (0.22 %) |
17,265 (12.56 %) |
2 (99.96 %) |
| 149 | cyanobacteria (SAG 85.79 2020 genbank) GCA_012516315.1 |
n/a | n/a | n/a | n/a | 44.88 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 2,190 (7.56 %) |
20,467 (13.93 %) |
1,030 (9.44 %) |
| 150 | cyanobacteria (SAG 85.79 2020 refseq) GCF_012516315.1 |
n/a | n/a | n/a | n/a | 44.88 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 2,190 (7.56 %) |
20,467 (13.93 %) |
1,030 (9.44 %) |
| 151 | Desulfovibrio desulfuricans (DSM 642 2013) GCA_000420465.1 |
n/a | n/a | n/a | n/a | 57.36 (100.00 %) |
n/a | 20 (100.00 %) |
n/a | 63 (0.09 %) |
21,875 (12.13 %) |
51 (97.19 %) |
| 152 | Desulfovibrio vulgaris str. (Hildenborough 2004) GCA_000195755.1 |
n/a | n/a | n/a | n/a | 63.28 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 241 (0.36 %) |
18,967 (8.89 %) |
2 (100.00 %) |
| 153 | Dinoroseobacter shibae DSM 16493 (DFL 12 2007) GCF_000018145.1 |
n/a | n/a | n/a | n/a | 65.52 (100.00 %) |
n/a | 6 (100.00 %) |
n/a | 156 (0.20 %) |
34,139 (16.62 %) |
6 (99.97 %) |
| 154 | E. coli (B C2566 2016) GCF_001559615.2 |
n/a | n/a | n/a | n/a | 50.81 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 78 (0.39 %) |
18,625 (7.36 %) |
1 (100.00 %) |
| 155 | E. coli (B C3029 2016) GCF_001559635.1 |
n/a | n/a | n/a | n/a | 50.82 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 77 (0.38 %) |
18,158 (6.98 %) |
1 (100.00 %) |
| 156 | E. coli (BE104 2019) GCF_005890115.1 |
n/a | n/a | n/a | n/a | 50.76 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 102 (0.49 %) |
19,984 (7.40 %) |
1 (99.99 %) |
| 157 | E. coli (BL21(DE3) 2010) GCA_000022665.2 |
n/a | n/a | n/a | n/a | 50.83 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 77 (0.38 %) |
18,815 (7.35 %) |
1 (99.99 %) |
| 158 | E. coli (K-12 BW25113 2014 refseq) GCF_000750555.1 |
n/a | n/a | n/a | n/a | 50.78 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 90 (0.38 %) |
19,508 (7.44 %) |
1 (99.99 %) |
| 159 | E. coli (K-12 C3026 2016) GCF_001559675.1 |
n/a | n/a | n/a | n/a | 50.76 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 102 (0.44 %) |
20,688 (7.36 %) |
12 (99.19 %) |
| 160 | E. coli (K-12 DHB4 2016) GCF_001559655.1 |
n/a | n/a | n/a | n/a | 50.73 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 100 (0.44 %) |
20,468 (7.59 %) |
2 (99.99 %) |
| 161 | E. coli (K-12 MG1655 2013 refseq) GCF_000005845.2 |
n/a | n/a | n/a | n/a | 50.79 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 93 (0.40 %) |
19,730 (7.53 %) |
1 (99.99 %) |
| 162 | E. coli (Nissle 1917 2014) GCA_000714595.1 |
n/a | n/a | n/a | n/a | 50.58 (100.00 %) |
79 (0.00 %) |
80 (100.00 %) |
n/a | 183 (1.59 %) |
18,242 (6.52 %) |
1 (99.97 %) |
| 163 | E. coli (Sakai substr. RIMD 0509952 2018) GCF_000008865.2 |
n/a | n/a | n/a | n/a | 50.48 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 169 (0.53 %) |
20,656 (7.31 %) |
15 (99.26 %) |
| 164 | Ehrlichia canis str. (Jake 2005) GCF_000012565.1 |
n/a | n/a | n/a | n/a | 28.96 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 94 (2.37 %) |
8,946 (15.16 %) |
2 (0.04 %) |
| 165 | Ehrlichia chaffeensis str. (Arkansas 2006) GCF_000013145.1 |
n/a | n/a | n/a | n/a | 30.10 (100.00 %) |
n/a | 1 (100.00 %) |
213 (1.10 %) |
157 (4.45 %) |
8,909 (15.31 %) |
2 (0.04 %) |
| 166 | Ehrlichia japonica (HF 2014) GCF_000632845.1 |
n/a | n/a | n/a | n/a | 29.65 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 124 (4.25 %) |
9,469 (16.92 %) |
1 (0.02 %) |
| 167 | Ehrlichia minasensis (B11 2019) GCF_004181775.1 |
n/a | n/a | n/a | n/a | 29.48 (99.99 %) |
n/a | 55 (100.00 %) |
n/a | 126 (1.96 %) |
9,219 (15.25 %) |
4 (0.41 %) |
| 168 | Ehrlichia muris (AS145 2013) GCF_000508225.1 |
n/a | n/a | n/a | n/a | 29.66 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 169 (6.11 %) |
9,879 (16.92 %) |
2 (0.07 %) |
| 169 | Francisella tularensis subsp. novicida (D9876 2015) GCF_000833355.1 |
n/a | n/a | n/a | n/a | 32.48 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 35 (0.55 %) |
12,202 (13.75 %) |
11 (0.24 %) |
| 170 | Gluconacetobacter diazotrophicus PA1 5 (PAl 5; ATCC 49037 2008) GCF_000021325.1 |
n/a | n/a | n/a | n/a | 66.32 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 240 (0.34 %) |
33,532 (20.48 %) |
2 (99.98 %) |
| 171 | Grimontia hollisae (FDAARGOS_111 2018) GCF_001558255.2 |
n/a | n/a | n/a | n/a | 49.51 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 86 (0.49 %) |
10,545 (4.43 %) |
166 (62.55 %) |
| 172 | Halomonas elongata (SEK2 2024) GCA_036257755.1 |
n/a | n/a | n/a | n/a | 64.19 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 136 (0.24 %) |
27,280 (14.78 %) |
1 (99.99 %) |
| 173 | heartwater rickettsia (Welgevonden 2005) GCF_000026005.1 |
n/a | n/a | n/a | n/a | 27.48 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 205 (5.16 %) |
12,505 (19.73 %) |
2 (0.04 %) |
| 174 | Heyndrickxia coagulans DSM 1 (ATCC 7050 2015) GCF_000832905.1 |
n/a | n/a | n/a | n/a | 46.90 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 152 (0.81 %) |
19,985 (12.30 %) |
0 (0.00 %) |
| 175 | inopinata (141012304 Brucella sp. 2016) GCF_900095155.1 |
n/a | n/a | n/a | n/a | 57.15 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 122 (0.26 %) |
17,323 (9.36 %) |
2 (100.00 %) |
| 176 | Janthinobacterium (BJB1 2017) GCA_002735775.2 |
n/a | n/a | n/a | n/a | 63.35 (100.00 %) |
n/a | 56 (100.00 %) |
n/a | 326 (0.37 %) |
62,065 (27.35 %) |
53 (99.81 %) |
| 177 | Janthinobacterium (BJB312 2017) GCA_002735715.1 |
n/a | n/a | n/a | n/a | 62.61 (100.00 %) |
n/a | 38 (100.00 %) |
n/a | 324 (0.49 %) |
60,023 (25.47 %) |
40 (99.53 %) |
| 178 | Klebsiella aerogenes (KCTC 2190 2011) GCA_000215745.1 |
n/a | n/a | n/a | n/a | 54.85 (100.00 %) |
1 (0.00 %) |
2 (100.00 %) |
n/a | 121 (0.42 %) |
34,291 (14.01 %) |
8 (99.38 %) |
| 179 | Klebsiella pneumoniae (ATCC BAA-2146 2016) GCA_000364385.3 |
n/a | n/a | n/a | n/a | 56.97 (100.00 %) |
n/a | 5 (100.00 %) |
n/a | 120 (0.47 %) |
42,179 (16.44 %) |
33 (99.46 %) |
| 180 | Lacticaseibacillus paracasei (LC2W 2011) GCA_000194785.1 |
n/a | n/a | n/a | n/a | 46.31 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 59 (0.29 %) |
10,445 (5.82 %) |
53 (0.81 %) |
| 181 | Lactobacillus kefiranofaciens (1207 2020) GCF_014656585.1 |
n/a | n/a | n/a | n/a | 37.62 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 97 (0.34 %) |
11,430 (10.46 %) |
33 (1.49 %) |
| 182 | Lactobacillus kefiranofaciens (ASM131133v1 JCM 8572 JSM 10550 2015) GCA_001311335.1 |
n/a | n/a | n/a | n/a | 37.41 (99.99 %) |
n/a | 104 (100.00 %) |
n/a | 78 (0.24 %) |
11,724 (11.51 %) |
29 (0.68 %) |
| 183 | Lactobacillus kefiranofaciens (ASM143419v1 JCM 8572 DSM 10550 2015) GCA_001434195.1 |
n/a | n/a | n/a | n/a | 37.47 (99.97 %) |
6 (0.01 %) |
138 (100.00 %) |
n/a | 81 (0.24 %) |
11,892 (11.46 %) |
30 (0.69 %) |
| 184 | Lactobacillus kefiranofaciens (ATCC 43761 2016) GCA_900103655.1 |
n/a | n/a | n/a | n/a | 37.21 (99.99 %) |
2 (0.01 %) |
84 (100.00 %) |
n/a | 112 (0.27 %) |
12,848 (11.34 %) |
27 (0.54 %) |
| 185 | Lactobacillus kefiranofaciens (JCM 6985 DSM 5016 2014) GCA_000615685.1 |
n/a | n/a | n/a | n/a | 37.21 (99.99 %) |
n/a | 123 (100.00 %) |
n/a | 115 (0.27 %) |
12,912 (11.58 %) |
28 (0.57 %) |
| 186 | Lactobacillus kefiranofaciens (JCM 6985 DSM 5016 2015) GCA_001435275.1 |
n/a | n/a | n/a | n/a | 37.22 (99.99 %) |
10 (0.00 %) |
133 (100.00 %) |
n/a | 117 (0.30 %) |
12,967 (11.63 %) |
28 (0.56 %) |
| 187 | Lactobacillus kefiranofaciens (KR 2017) GCA_002276565.1 |
n/a | n/a | n/a | n/a | 37.40 (99.99 %) |
n/a | 97 (100.00 %) |
n/a | 106 (0.37 %) |
12,540 (11.80 %) |
27 (0.61 %) |
| 188 | Lactobacillus kefiranofaciens (LKK75 2019) GCA_009184665.1 |
n/a | n/a | n/a | n/a | 37.38 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 113 (0.28 %) |
13,039 (11.33 %) |
30 (1.19 %) |
| 189 | Lactobacillus kefiranofaciens (ZW3 2011) GCA_000214785.1 |
n/a | n/a | n/a | n/a | 37.36 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 120 (0.29 %) |
12,963 (11.07 %) |
31 (1.17 %) |
| 190 | Lactococcus lactis (IL1403 2018) GCA_003722275.1 |
n/a | n/a | n/a | n/a | 35.33 (100.00 %) |
1 (0.00 %) |
2 (100.00 %) |
n/a | 85 (0.42 %) |
17,438 (16.62 %) |
32 (0.72 %) |
| 191 | Legionella pneumophila (Leg01/16 2013 genbank) GCA_000468235.1 |
n/a | n/a | n/a | n/a | 38.19 (99.97 %) |
n/a | 581 (100.00 %) |
n/a | 67 (0.19 %) |
24,003 (13.13 %) |
18 (0.28 %) |
| 192 | Legionella pneumophila (Leg01/16 2013 refseq) GCF_000468235.1 |
n/a | n/a | n/a | n/a | 38.19 (99.97 %) |
n/a | 581 (100.00 %) |
n/a | 67 (0.19 %) |
24,003 (13.13 %) |
18 (0.28 %) |
| 193 | Legionella pneumophila (Lpm7613 Lpm7613 2016) GCF_900092465.1 |
n/a | n/a | n/a | n/a | 38.24 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 60 (0.69 %) |
22,513 (13.32 %) |
22 (0.98 %) |
| 194 | Leptospira sp. patho 1 (ATI7-C-A5 2023) GCF_002811955.2 |
n/a | n/a | n/a | n/a | 47.80 (100.00 %) |
n/a | 68 (100.00 %) |
n/a | 56 (0.11 %) |
34,438 (16.06 %) |
16 (0.49 %) |
| 195 | Leuconostoc citreum (KM20 2008) GCA_000026405.1 |
n/a | n/a | n/a | n/a | 38.87 (100.00 %) |
n/a | 5 (100.00 %) |
n/a | 48 (0.46 %) |
8,656 (8.35 %) |
19 (1.37 %) |
| 196 | Limosilactobacillus fermentum AGR1485 GCF_011032765.1 |
n/a | n/a | n/a | n/a | 51.15 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 68 (1.17 %) |
5,312 (5.45 %) |
1 (99.98 %) |
| 197 | Limosilactobacillus fermentum AGR1487 GCF_011032745.1 |
n/a | n/a | n/a | n/a | 52.17 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 43 (0.27 %) |
5,358 (4.69 %) |
0 (0.00 %) |
| 198 | Limosilactobacillus fermentum SRCM 103290 GCF_004063635.1 |
n/a | n/a | n/a | n/a | 51.37 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 61 (0.23 %) |
5,590 (4.50 %) |
1 (97.52 %) |
| 199 | Limosilactobacillus fermentum YL-11 GCF_003860425.1 |
n/a | n/a | n/a | n/a | 51.94 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 46 (0.65 %) |
5,855 (5.79 %) |
1 (99.97 %) |
| 200 | Listeria innocua (ATCC 33091 2012) GCF_000241405.1 |
n/a | n/a | n/a | n/a | 37.35 (99.96 %) |
28 (0.05 %) |
45 (99.95 %) |
n/a | 75 (0.31 %) |
19,974 (13.98 %) |
15 (0.27 %) |
| 201 | Listeria monocytogenes (EGD-e 2003) GCF_000196035.1 |
n/a | n/a | n/a | n/a | 37.98 (100.00 %) |
n/a | 12 (100.00 %) |
n/a | 68 (0.32 %) |
19,806 (13.52 %) |
19 (1.30 %) |
| 202 | Listeria monocytogenes (LM07-00948 2016) GCF_001564855.1 |
n/a | n/a | n/a | n/a | 37.93 (100.00 %) |
n/a | 25 (100.00 %) |
n/a | 99 (0.45 %) |
20,116 (13.44 %) |
17 (0.37 %) |
| 203 | Lyme disease spirochete (Bol26 2009) GCF_000181575.2 |
n/a | n/a | n/a | n/a | 28.59 (100.00 %) |
n/a | 20 (100.00 %) |
n/a | 132 (1.33 %) |
12,634 (28.57 %) |
3 (0.05 %) |
| 204 | Lysinibacillus sphaericus (C3-41 2008) GCA_000017965.1 |
n/a | n/a | n/a | n/a | 37.13 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 121 (0.31 %) |
30,334 (12.48 %) |
21 (1.17 %) |
| 205 | Methylococcus capsulatus str. (Bath 2005) GCF_000008325.1 |
n/a | n/a | n/a | n/a | 63.58 (100.00 %) |
1 (0.00 %) |
2 (100.00 %) |
n/a | 65 (0.15 %) |
19,567 (11.24 %) |
1 (100.00 %) |
| 206 | Methylorubrum extorquens (CM4 2008) GCA_000021845.1 |
n/a | n/a | n/a | n/a | 68.08 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 361 (0.37 %) |
55,843 (22.73 %) |
3 (100.00 %) |
| 207 | Mycobacterium avium (hominissuis A5 2014) GCF_000696715.1 |
n/a | n/a | n/a | n/a | 69.40 (100.00 %) |
n/a | 50 (100.00 %) |
n/a | 550 (0.52 %) |
51,968 (27.34 %) |
50 (99.99 %) |
| 208 | Mycobacterium palustre (DSM 44572 2017) GCF_002101785.1 |
n/a | n/a | n/a | n/a | 68.50 (99.99 %) |
n/a | 158 (100.00 %) |
n/a | 585 (0.53 %) |
55,559 (24.92 %) |
158 (99.93 %) |
| 209 | Mycobacterium sp. (VKM Ac-1817D 2014) GCA_000416365.2 |
n/a | n/a | n/a | n/a | 66.20 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 261 (0.21 %) |
49,141 (17.12 %) |
1 (100.00 %) |
| 210 | Mycobacterium tuberculosis (ASM19595v2 H37Rv 2013) GCF_000195955.2 |
n/a | n/a | n/a | n/a | 65.61 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 1,059 (1.47 %) |
34,168 (17.69 %) |
1 (100.00 %) |
| 211 | Mycobacterium tuberculosis (ASM27773v2 H37Rv 2013) GCA_000277735.2 |
n/a | n/a | n/a | n/a | 65.62 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 1,067 (1.49 %) |
34,174 (17.70 %) |
1 (100.00 %) |
| 212 | Mycobacterium tuberculosis (GReAT_CRyPTIC_Unmapped_H37Rv 2023) GCF_963525475.1 |
n/a | n/a | n/a | n/a | 65.60 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 1,114 (1.68 %) |
34,720 (17.82 %) |
1 (100.00 %) |
| 213 | Mycobacterium tuberculosis (H37Rv 2013) GCF_000277735.2 |
n/a | n/a | n/a | n/a | 65.62 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 1,067 (1.49 %) |
34,174 (17.70 %) |
1 (100.00 %) |
| 214 | Mycobacterium tuberculosis (MTb-Oman-3215873 2023) GCF_030566675.1 |
n/a | n/a | n/a | n/a | 65.29 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 1,000 (2.30 %) |
35,591 (17.10 %) |
1 (100.00 %) |
| 215 | Mycoplasmoides pneumoniae (M129-B7 2015) GCF_000331085.3 |
n/a | n/a | n/a | n/a | 40.01 (100.00 %) |
3 (0.00 %) |
4 (100.00 %) |
n/a | 50 (0.39 %) |
4,116 (9.12 %) |
36 (4.75 %) |
| 216 | Neisseria meningitidis (Z2491 2003) GCA_000009105.1 |
n/a | n/a | n/a | n/a | 51.81 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 190 (1.51 %) |
13,500 (15.34 %) |
1 (99.91 %) |
| 217 | Neorickettsia sennetsu str. (Miyayama 2006) GCF_000013165.1 |
n/a | n/a | n/a | n/a | 41.08 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 17 (0.29 %) |
3,544 (6.96 %) |
11 (0.47 %) |
| 218 | Nitratireductor (SY7 2020) GCA_007922615.2 |
n/a | n/a | n/a | n/a | 64.89 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 129 (0.29 %) |
43,679 (19.65 %) |
1 (100.00 %) |
| 219 | Nitrosomonas europaea (ATCC 19718 2003) GCA_000009145.1 |
n/a | n/a | n/a | n/a | 50.72 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 68 (0.39 %) |
8,683 (6.11 %) |
1 (99.98 %) |
| 220 | Paenibacillus larvae subsp. larvae (Eric_IV 2018) GCF_002951935.1 |
n/a | n/a | n/a | n/a | 44.20 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 120 (0.40 %) |
14,781 (7.06 %) |
630 (11.68 %) |
| 221 | Pectobacterium brasiliense (1692 2020) GCA_009873295.1 |
n/a | n/a | n/a | n/a | 52.15 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 157 (0.66 %) |
21,754 (7.97 %) |
1 (100.00 %) |
| 222 | Photobacterium damselae subsp. damselae (WMD-P2 2024) GCF_038086725.1 |
n/a | n/a | n/a | n/a | 40.79 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 135 (1.04 %) |
17,089 (6.74 %) |
72 (2.79 %) |
| 223 | Pimelobacter simplex (VKM Ac-2033D 2014) GCF_000785495.1 |
n/a | n/a | n/a | n/a | 72.85 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 948 (1.07 %) |
56,104 (27.60 %) |
1 (100.00 %) |
| 224 | Plasmodium malariae (2016) GCF_900090045.1 |
5,965 (37.07 %) |
n/a | n/a | n/a | 24.38 (100.00 %) |
n/a | 62 (100.00 %) |
n/a | 47,855 (7.58 %) |
320,327 (54.68 %) |
21 (0.02 %) |
| 225 | Pseudomonas aeruginosa (PAO1 2006) GCF_000006765.1 |
n/a | n/a | n/a | n/a | 66.56 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 208 (0.43 %) |
58,643 (23.70 %) |
1 (100.00 %) |
| 226 | Pseudomonas fluorescens (SBW25 2009) GCF_000009225.2 |
n/a | n/a | n/a | n/a | 60.50 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 225 (0.43 %) |
44,434 (14.25 %) |
0 (0.00 %) |
| 227 | Rhizobium ruizarguesonis (TP53 2024) GCA_035921845.1 |
n/a | n/a | n/a | n/a | 60.78 (100.00 %) |
n/a | 5 (100.00 %) |
n/a | 232 (0.27 %) |
57,486 (16.77 %) |
5 (100.00 %) |
| 228 | Rhodobacter capsulatus (SB 1003 2010) GCF_000021865.1 |
n/a | n/a | n/a | n/a | 66.56 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 306 (0.50 %) |
37,423 (23.53 %) |
2 (100.00 %) |
| 229 | Rhodococcus erythropolis (CCM2595 2013) GCA_000454045.1 |
n/a | n/a | n/a | n/a | 62.45 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 461 (0.39 %) |
37,291 (12.05 %) |
2 (100.00 %) |
| 230 | Rhodococcus qingshengii (IGTS8 2019) GCF_006384225.1 |
n/a | n/a | n/a | n/a | 62.38 (98.88 %) |
27 (1.12 %) |
25 (100.00 %) |
n/a | 455 (0.37 %) |
41,574 (12.30 %) |
25 (99.99 %) |
| 231 | Rickettsia akari str. (Hartford 2007) GCF_000018205.1 |
n/a | n/a | n/a | n/a | 32.33 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 49 (0.36 %) |
11,383 (19.29 %) |
3 (0.14 %) |
| 232 | Rickettsia asembonensis (NMRCii 2016) GCF_000828125.2 |
n/a | n/a | n/a | n/a | 32.24 (99.99 %) |
n/a | 88 (100.00 %) |
n/a | 55 (0.27 %) |
11,795 (21.71 %) |
6 (0.18 %) |
| 233 | Rickettsia asiatica (Maytaro1284 2019) GCF_007989425.1 |
n/a | n/a | n/a | n/a | 32.34 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 54 (0.41 %) |
11,712 (19.66 %) |
5 (0.17 %) |
| 234 | Rickettsia australis str. (Cutlack 2012) GCF_000284155.1 |
n/a | n/a | n/a | n/a | 32.28 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 53 (0.39 %) |
11,054 (19.38 %) |
2 (0.11 %) |
| 235 | Rickettsia bellii (RML369-C 2006) GCF_000012385.1 |
n/a | n/a | n/a | n/a | 31.65 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 94 (0.49 %) |
12,640 (20.23 %) |
3 (0.13 %) |
| 236 | Rickettsia canadensis str. (CA410 2012) GCF_000283915.1 |
n/a | n/a | n/a | n/a | 31.01 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 47 (0.61 %) |
11,429 (21.81 %) |
2 (0.13 %) |
| 237 | Rickettsia conorii str. (Malish 7 2001) GCF_000007025.1 |
n/a | n/a | n/a | n/a | 32.44 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 30 (0.34 %) |
12,411 (21.08 %) |
4 (0.15 %) |
| 238 | Rickettsia endosymbiont of Aspidapion aeneum (54715 2024) GCF_964030775.1 |
n/a | n/a | n/a | n/a | 34.61 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 112 (1.81 %) |
12,759 (23.17 %) |
15 (0.47 %) |
| 239 | Rickettsia endosymbiont of Cantharis rufa (54716 2024) GCF_964026445.1 |
n/a | n/a | n/a | n/a | 32.76 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 182 (0.86 %) |
9,507 (22.31 %) |
4 (0.13 %) |
| 240 | Rickettsia endosymbiont of Cardiosporidium cionae (ESH_2018B 2020) GCF_015476335.1 |
n/a | n/a | n/a | n/a | 29.06 (99.99 %) |
336 (0.04 %) |
365 (99.96 %) |
n/a | 129 (1.24 %) |
9,961 (21.35 %) |
1 (0.02 %) |
| 241 | Rickettsia endosymbiont of Ceutorhynchus obstrictus (54717 2024) GCF_964026565.1 |
n/a | n/a | n/a | n/a | 34.42 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 150 (1.85 %) |
14,389 (22.91 %) |
14 (0.37 %) |
| 242 | Rickettsia endosymbiont of Culicoides newsteadi (RiCNE 2017) GCF_002259525.1 |
n/a | n/a | n/a | n/a | 33.05 (99.96 %) |
12 (0.02 %) |
193 (100.00 %) |
n/a | 114 (0.94 %) |
9,963 (16.71 %) |
5 (0.15 %) |
| 243 | Rickettsia endosymbiont of Gonocerus acuteangulatus (54736 2024) GCF_964026435.1 |
n/a | n/a | n/a | n/a | 31.90 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 182 (1.20 %) |
4,555 (20.64 %) |
2 (0.08 %) |
| 244 | Rickettsia endosymbiont of Halotydeus destructor (MaVIC_2019 2025) GCF_049278075.1 |
n/a | n/a | n/a | n/a | 33.21 (100.00 %) |
n/a | 9 (100.00 %) |
n/a | 79 (0.47 %) |
12,772 (23.07 %) |
9 (0.26 %) |
| 245 | Rickettsia endosymbiont of Lasioglossum villosulum (54739 2024) GCF_964026455.1 |
n/a | n/a | n/a | n/a | 31.74 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 53 (0.56 %) |
12,793 (20.33 %) |
2 (0.09 %) |
| 246 | Rickettsia endosymbiont of Nabis limbatus (54738 2025) GCF_965196655.1 |
n/a | n/a | n/a | n/a | 32.05 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 53 (0.40 %) |
8,540 (21.06 %) |
3 (0.09 %) |
| 247 | Rickettsia endosymbiont of Oedothorax gibbosus (Oegibbosus-W744x776 2022) GCF_936269705.1 |
n/a | n/a | n/a | n/a | 32.99 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 91 (1.13 %) |
9,163 (18.03 %) |
3 (0.07 %) |
| 248 | Rickettsia endosymbiont of Orchestes rusci (54718 2024) GCF_964030945.1 |
n/a | n/a | n/a | n/a | 34.56 (100.00 %) |
n/a | 5 (100.00 %) |
n/a | 156 (1.61 %) |
14,897 (22.38 %) |
13 (0.30 %) |
| 249 | Rickettsia endosymbiont of Pantilius tunicatus (54737 2024) GCF_964291875.1 |
n/a | n/a | n/a | n/a | 31.67 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 86 (0.48 %) |
9,545 (17.11 %) |
3 (0.10 %) |
| 250 | Rickettsia endosymbiont of Polydrusus tereticollis (54719 2024) GCF_964026385.1 |
n/a | n/a | n/a | n/a | 33.68 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 122 (1.29 %) |
4,398 (18.03 %) |
7 (0.12 %) |
| 251 | Rickettsia endosymbiont of Rhinocyllus conicus (54720 2024) GCF_964026465.1 |
n/a | n/a | n/a | n/a | 31.84 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 70 (0.33 %) |
13,747 (20.84 %) |
2 (0.09 %) |
| 252 | Rickettsia endosymbiont of Seladonia tumulorum (54740 2024) GCF_964030815.1 |
n/a | n/a | n/a | n/a | 31.76 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 50 (0.50 %) |
12,589 (20.25 %) |
2 (0.10 %) |
| 253 | Rickettsia endosymbiont of Urophora cardui (54735 2024) GCF_964030725.1 |
n/a | n/a | n/a | n/a | 32.78 (100.00 %) |
n/a | 7 (100.00 %) |
n/a | 134 (2.34 %) |
16,320 (29.82 %) |
2 (0.05 %) |
| 254 | Rickettsia felis (LSU-Lb 2014) GCF_000804505.1 |
n/a | n/a | n/a | n/a | 32.44 (99.99 %) |
31 (0.00 %) |
74 (100.00 %) |
n/a | 88 (0.63 %) |
13,412 (20.99 %) |
3 (0.11 %) |
| 255 | Rickettsia fournieri (AUS118 2018) GCF_900243065.1 |
n/a | n/a | n/a | n/a | 32.36 (99.97 %) |
6 (0.03 %) |
6 (99.97 %) |
n/a | 51 (0.22 %) |
11,039 (19.81 %) |
2 (0.10 %) |
| 256 | Rickettsia gravesii (BWI-1 2013) GCF_000485845.1 |
n/a | n/a | n/a | n/a | 32.23 (100.00 %) |
n/a | 29 (100.00 %) |
n/a | 40 (0.20 %) |
11,538 (20.03 %) |
4 (0.15 %) |
| 257 | Rickettsia helvetica (OB144 2024) GCF_963970025.1 |
n/a | n/a | n/a | n/a | 32.24 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 55 (0.53 %) |
11,962 (19.88 %) |
3 (0.13 %) |
| 258 | Rickettsia honei (RB 2012) GCF_000263055.1 |
n/a | n/a | n/a | n/a | 32.42 (100.00 %) |
n/a | 11 (100.00 %) |
n/a | 30 (0.12 %) |
12,362 (20.94 %) |
4 (0.16 %) |
| 259 | Rickettsia hoogstraalii (Croatica 2014) GCF_000825685.1 |
n/a | n/a | n/a | n/a | 32.38 (100.00 %) |
1 (0.00 %) |
3 (100.00 %) |
n/a | 85 (0.73 %) |
12,688 (21.64 %) |
5 (0.16 %) |
| 260 | Rickettsia japonica (YH 2011) GCF_000283595.1 |
n/a | n/a | n/a | n/a | 32.35 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 50 (0.44 %) |
12,569 (21.26 %) |
3 (0.13 %) |
| 261 | Rickettsia koreansis (CNH17-7 2025) GCF_046532895.1 |
n/a | n/a | n/a | n/a | 32.44 (100.00 %) |
n/a | 9 (100.00 %) |
n/a | 65 (0.33 %) |
11,624 (19.28 %) |
3 (0.12 %) |
| 262 | Rickettsia monacensis (IrR/Munich 2015) GCF_000499665.2 |
n/a | n/a | n/a | n/a | 32.39 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 47 (0.32 %) |
7,165 (21.15 %) |
5 (0.15 %) |
| 263 | Rickettsia prowazekii str. (Chernikova 2012) GCF_000277165.1 |
n/a | n/a | n/a | n/a | 29.01 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 32 (0.14 %) |
11,829 (24.22 %) |
2 (0.14 %) |
| 264 | Rickettsia rhipicephali str. (3-7-female6-CWPP 2012) GCF_000284075.1 |
n/a | n/a | n/a | n/a | 32.39 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 48 (0.37 %) |
12,708 (20.99 %) |
4 (0.15 %) |
| 265 | Rickettsia rickettsii str. 'Sheila Smith' (Sheila Smith 2007) GCF_000018225.1 |
n/a | n/a | n/a | n/a | 32.47 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 39 (0.43 %) |
12,114 (20.73 %) |
4 (0.16 %) |
| 266 | Rickettsia sibirica (246 2003) GCF_000166935.1 |
n/a | n/a | n/a | n/a | 32.47 (100.00 %) |
1 (0.00 %) |
1 (100.00 %) |
n/a | 30 (0.23 %) |
12,207 (21.06 %) |
4 (0.16 %) |
| 267 | Rickettsia slovaca (13-B 2011) GCF_000237845.1 |
n/a | n/a | n/a | n/a | 32.50 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 40 (0.43 %) |
12,412 (20.98 %) |
4 (0.16 %) |
| 268 | Rickettsia tamurae (AT-1 2014) GCF_000751075.1 |
n/a | n/a | n/a | n/a | 32.47 (100.00 %) |
n/a | 27 (100.00 %) |
n/a | 60 (0.28 %) |
12,320 (20.35 %) |
2 (0.10 %) |
| 269 | Rickettsia tillamookensis (Tillamook 23 2022) GCF_016743795.2 |
n/a | n/a | n/a | n/a | 32.40 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 76 (0.79 %) |
12,260 (21.13 %) |
5 (0.25 %) |
| 270 | Rickettsia typhi str. (Wilmington 2004) GCF_000008045.1 |
n/a | n/a | n/a | n/a | 28.92 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 48 (0.30 %) |
11,755 (23.68 %) |
2 (0.14 %) |
| 271 | Salmonella bongori (NCTC 12419 2011) GCF_000252995.1 |
n/a | n/a | n/a | n/a | 51.33 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 90 (0.24 %) |
20,125 (7.97 %) |
1 (99.99 %) |
| 272 | Salmonella enterica (Typhimurium LT2 2016) GCF_000006945.2 |
n/a | n/a | n/a | n/a | 52.24 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 77 (0.25 %) |
25,684 (9.55 %) |
2 (99.99 %) |
| 273 | Salmonella enterica subsp. enterica serovar Typhimurium str. (14028S 2009) GCA_000022165.1 |
n/a | n/a | n/a | n/a | 52.21 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 80 (0.24 %) |
25,976 (9.65 %) |
2 (99.99 %) |
| 274 | Shewanella oneidensis (MR-1 2012) GCF_000146165.2 |
n/a | n/a | n/a | n/a | 45.89 (100.00 %) |
8 (0.00 %) |
10 (100.00 %) |
n/a | 193 (0.56 %) |
6,704 (4.54 %) |
401 (8.15 %) |
| 275 | Shigella boydii (ESBL-W3-2 2017) GCF_002290485.1 |
n/a | n/a | n/a | n/a | 50.63 (99.99 %) |
n/a | 154 (100.00 %) |
n/a | 83 (0.20 %) |
18,773 (6.72 %) |
164 (82.25 %) |
| 276 | Shigella dysenteriae (SWHEFF_49 2022) GCF_022354085.1 |
n/a | n/a | n/a | n/a | 50.62 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 121 (0.55 %) |
22,011 (7.51 %) |
11 (99.41 %) |
| 277 | Shigella flexneri 2a str. (301 2011) GCF_000006925.2 |
n/a | n/a | n/a | n/a | 50.65 (100.00 %) |
1 (0.00 %) |
3 (100.00 %) |
n/a | 88 (0.35 %) |
14,141 (8.30 %) |
18 (97.13 %) |
| 278 | Shigella flexneri 5a (M90T 2019) GCA_004799585.1 |
n/a | n/a | n/a | n/a | 50.67 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 76 (0.22 %) |
13,570 (7.88 %) |
19 (97.31 %) |
| 279 | Shigella sonnei (ATCC 29930 2018) GCF_002950395.1 |
n/a | n/a | n/a | n/a | 51.01 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 96 (0.59 %) |
14,438 (9.03 %) |
4 (99.85 %) |
| 280 | Sodalis glossinidius str. (morsitans 2006) GCF_000010085.1 |
n/a | n/a | n/a | n/a | 54.50 (100.00 %) |
n/a | 4 (100.00 %) |
n/a | 120 (0.20 %) |
22,713 (10.83 %) |
9 (98.81 %) |
| 281 | spirochetes (HT31 2021) GCF_019668505.1 |
n/a | n/a | n/a | n/a | 28.88 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 51 (0.56 %) |
8,224 (22.61 %) |
1 (0.03 %) |
| 282 | spirochetes (MN14-1420 2017) GCF_001945665.1 |
n/a | n/a | n/a | n/a | 27.89 (100.00 %) |
n/a | 16 (100.00 %) |
n/a | 148 (1.74 %) |
12,866 (30.71 %) |
3 (0.05 %) |
| 283 | Staphylococcus aureus (JE2 2017) GCA_002085525.1 |
n/a | n/a | n/a | n/a | 32.78 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 138 (1.03 %) |
22,355 (16.38 %) |
11 (0.54 %) |
| 284 | Staphylococcus epidermidis (BCM-HMP0060 2009) GCF_000159575.1 |
n/a | n/a | n/a | n/a | 31.93 (97.96 %) |
69 (2.04 %) |
115 (97.96 %) |
n/a | 109 (0.37 %) |
20,000 (16.77 %) |
13 (0.29 %) |
| 285 | Streptococcus pneumoniae (D39V 2018) GCF_003003495.1 |
n/a | n/a | n/a | n/a | 39.71 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 83 (0.62 %) |
9,475 (9.44 %) |
27 (0.83 %) |
| 286 | Streptomyces ambofaciens (ATCC 23877 2015) GCF_001267885.1 |
n/a | n/a | n/a | n/a | 72.19 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 2,423 (1.48 %) |
74,062 (23.83 %) |
2 (100.00 %) |
| 287 | Streptomyces ambofaciens (DSM 40697 2016) GCF_001632865.1 |
n/a | n/a | n/a | n/a | 72.33 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 2,321 (1.52 %) |
72,368 (23.98 %) |
1 (100.00 %) |
| 288 | Streptomyces avermitilis NBRC 14893 (MA-4680 2016) GCF_000009765.2 |
n/a | n/a | n/a | n/a | 70.70 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 2,947 (1.57 %) |
78,079 (22.08 %) |
2 (100.00 %) |
| 289 | Streptomyces bottropensis (ATCC 25435 2013) GCA_000383595.1 |
n/a | n/a | n/a | n/a | 71.19 (100.00 %) |
7 (0.00 %) |
4 (100.00 %) |
n/a | 2,224 (1.21 %) |
78,043 (22.95 %) |
1 (100.00 %) |
| 290 | Streptomyces curacoi (DSM 40107 2016) GCF_001513975.1 |
n/a | n/a | n/a | n/a | 70.99 (99.87 %) |
22 (0.13 %) |
53 (99.87 %) |
n/a | 1,949 (1.31 %) |
72,708 (22.19 %) |
31 (99.98 %) |
| 291 | Streptomyces mobaraensis (DSM 40587 2021) GCF_020099395.1 |
n/a | n/a | n/a | n/a | 73.06 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 2,563 (1.62 %) |
72,219 (28.80 %) |
2 (100.00 %) |
| 292 | Streptomyces parvulus (2297 2016) GCF_001660045.1 |
n/a | n/a | n/a | n/a | 72.73 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 1,266 (0.88 %) |
72,888 (26.01 %) |
2 (100.00 %) |
| 293 | Stutzerimonas degradans (XL272 2019) GCA_009740185.1 |
n/a | n/a | n/a | n/a | 64.69 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 77 (0.17 %) |
35,942 (20.69 %) |
1 (100.00 %) |
| 294 | Vibrio alginolyticus (E110 2022) GCF_023650915.1 |
n/a | n/a | n/a | n/a | 44.71 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 102 (0.91 %) |
14,086 (4.58 %) |
147 (2.59 %) |
| 295 | Vibrio cholerae (IEC224 2012) GCF_000250855.1 |
n/a | n/a | n/a | n/a | 47.46 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 93 (0.42 %) |
11,018 (4.87 %) |
26 (0.24 %) |
| 296 | Vibrio cholerae (RFB16 2019) GCF_008369605.1 |
n/a | n/a | n/a | n/a | 47.42 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 113 (0.62 %) |
12,805 (5.57 %) |
17 (0.25 %) |
| 297 | Vibrio cholerae O1 (AAS91 2020) GCF_009938115.1 |
n/a | n/a | n/a | n/a | 47.61 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 96 (0.49 %) |
12,240 (5.37 %) |
12 (0.58 %) |
| 298 | Vibrio cholerae O1 biovar El Tor (C6709 2020) GCF_013085105.1 |
n/a | n/a | n/a | n/a | 47.44 (100.00 %) |
1 (0.00 %) |
2 (100.00 %) |
n/a | 103 (0.37 %) |
11,153 (4.91 %) |
26 (0.24 %) |
| 299 | Vibrio cholerae O1 biovar El Tor (DRC-193A 2020) GCF_013085145.1 |
n/a | n/a | n/a | n/a | 47.50 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 92 (0.40 %) |
11,303 (4.85 %) |
24 (0.23 %) |
| 300 | Vibrio cholerae O1 biovar El Tor (E7946 2020) GCF_013085165.1 |
n/a | n/a | n/a | n/a | 47.50 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 95 (0.41 %) |
11,786 (5.22 %) |
26 (0.24 %) |
| 301 | Vibrio cholerae O1 biovar El Tor (FJ147 2015) GCF_000963555.1 |
n/a | n/a | n/a | n/a | 47.51 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 90 (0.41 %) |
11,194 (4.83 %) |
24 (0.23 %) |
| 302 | Vibrio cholerae O1 biovar El Tor (HC1037 2018) GCF_002946655.1 |
n/a | n/a | n/a | n/a | 47.53 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 87 (0.31 %) |
10,845 (4.71 %) |
25 (0.27 %) |
| 303 | Vibrio cholerae O1 biovar El Tor (P27459 2020) GCF_013085125.1 |
n/a | n/a | n/a | n/a | 47.49 (100.00 %) |
1 (0.00 %) |
2 (100.00 %) |
n/a | 97 (0.41 %) |
10,788 (4.82 %) |
26 (0.25 %) |
| 304 | Vibrio cholerae O1 biovar El Tor str. (N16961 2019) GCF_900205735.1 |
n/a | n/a | n/a | n/a | 47.49 (100.00 %) |
9 (0.00 %) |
2 (100.00 %) |
n/a | 92 (0.40 %) |
10,753 (4.81 %) |
26 (0.25 %) |
| 305 | Vibrio cholerae O1 str. (2010EL-1786 2011) GCF_000166455.1 |
n/a | n/a | n/a | n/a | 47.50 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 87 (0.31 %) |
11,025 (4.77 %) |
27 (0.29 %) |
| 306 | Vibrio cholerae O1 str. (KW3 2015) GCF_001318185.1 |
n/a | n/a | n/a | n/a | 47.51 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 98 (0.45 %) |
11,167 (4.81 %) |
24 (0.23 %) |
| 307 | Vibrio cincinnatiensis (NCTC12012 2018) GCF_900460255.1 |
n/a | n/a | n/a | n/a | 43.78 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 69 (0.42 %) |
12,268 (5.78 %) |
247 (3.90 %) |
| 308 | Vibrio fluvialis (ATCC 33809 2018) GCF_001558415.2 |
n/a | n/a | n/a | n/a | 49.93 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 56 (0.21 %) |
13,415 (4.55 %) |
1 (65.37 %) |
| 309 | Vibrio furnissii (FDAARGOS_777 2019) GCF_006364355.1 |
n/a | n/a | n/a | n/a | 50.60 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 181 (0.43 %) |
16,118 (5.35 %) |
5 (98.49 %) |
| 310 | Vibrio harveyi (SB1 2023) GCF_030060435.1 |
n/a | n/a | n/a | n/a | 44.98 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 129 (0.98 %) |
17,202 (6.05 %) |
238 (2.42 %) |
| 311 | Vibrio injensis (M12-1144 2016) GCF_001895205.1 |
n/a | n/a | n/a | n/a | 43.97 (100.00 %) |
2 (0.00 %) |
33 (100.00 %) |
n/a | 74 (0.35 %) |
13,002 (6.00 %) |
131 (4.83 %) |
| 312 | Vibrio metoecus (ZF102 2023) GCF_030580635.1 |
n/a | n/a | n/a | n/a | 46.92 (100.00 %) |
n/a | 4 (100.00 %) |
n/a | 69 (0.78 %) |
9,613 (4.38 %) |
17 (0.55 %) |
| 313 | Vibrio metschnikovii (NCTC8443 2018) GCF_900460295.1 |
n/a | n/a | n/a | n/a | 44.16 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 73 (0.31 %) |
12,353 (5.63 %) |
114 (1.82 %) |
| 314 | Vibrio mimicus (NCTC11435 2018) GCF_900460385.1 |
n/a | n/a | n/a | n/a | 46.34 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 50 (0.71 %) |
12,049 (5.40 %) |
177 (3.52 %) |
| 315 | Vibrio parahaemolyticus (RIMD 2210633 substr. RIMD 2210633 2004) GCF_000196095.1 |
n/a | n/a | n/a | n/a | 45.37 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 89 (0.65 %) |
14,595 (4.62 %) |
25 (0.29 %) |
| 316 | Vibrio vulnificus NBRC 15645 (ATCC 27562 2017) GCF_002224265.1 |
n/a | n/a | n/a | n/a | 46.74 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 157 (1.34 %) |
14,064 (5.51 %) |
13 (0.31 %) |
| 317 | Yersinia enterocolitica subsp. palearctica (Y11 2011) GCF_000253175.1 |
n/a | n/a | n/a | n/a | 46.97 (100.00 %) |
n/a | 2 (100.00 %) |
n/a | 144 (0.40 %) |
8,173 (4.66 %) |
391 (13.11 %) |
| 318 | Yersinia pestis (A1122 2011) GCF_000222975.1 |
n/a | n/a | n/a | n/a | 47.63 (100.00 %) |
n/a | 3 (100.00 %) |
n/a | 795 (1.20 %) |
5,502 (5.05 %) |
214 (7.84 %) |
| TOTALS: | total assembly count 318 | |||||||||||