Bacteria Genomes assembly hubs, track statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of bacteria only.

See also: hub access, assembly statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
The numbers are: item count (percent coverage)
Except for the gc5Base column which is: overall GC % average (percent coverage)
count common name
link to genome browser		 ncbiRefSeq xenoRefGene augustus
genes		 Ensembl
genes		 gc5 base gaps assembly
sequences		 Repeat
Masker		 TRF
simpleRepeat		 window
Masker		 cpg
islands
1 Acetivibrio thermocellus DSM 2360 (LQRI 2016)
GCF_001692755.1		 n/a n/a n/a n/a 39.15
(100.00 %)		 n/a 1
(100.00 %)		 n/a 396
(1.14 %)		 21,447
(13.15 %)		 116
(1.71 %)
2 Acinetobacter baumannii (17978UN 2021)
GCF_019356215.1		 n/a n/a n/a n/a 38.90
(100.00 %)		 n/a 4
(100.00 %)		 n/a 112
(0.39 %)		 23,675
(11.89 %)		 55
(1.10 %)
3 Acinetobacter baumannii (AB5075-UW 2015)
GCF_000963815.1		 n/a n/a n/a n/a 39.02
(100.00 %)		 n/a 4
(100.00 %)		 n/a 89
(0.44 %)		 23,479
(11.71 %)		 53
(1.14 %)
4 Acinetobacter baumannii (ATCC 17978 2007)
GCF_000015425.1		 n/a n/a n/a n/a 38.92
(100.00 %)		 1
(0.00 %)		 4
(100.00 %)		 n/a 105
(0.19 %)		 23,238
(11.86 %)		 50
(1.04 %)
5 Acinetobacter baumannii (ATCC 17978 2021)
GCA_902728005.1		 n/a n/a n/a n/a 38.90
(100.00 %)		 n/a 4
(100.00 %)		 n/a 115
(0.39 %)		 22,872
(11.47 %)		 53
(1.10 %)
6 Acinetobacter baumannii (ATCC 17978-mff 2015)
GCF_001077675.1		 n/a n/a n/a n/a 38.95
(100.00 %)		 n/a 2
(100.00 %)		 n/a 104
(0.39 %)		 23,205
(11.83 %)		 51
(1.07 %)
7 Acinetobacter baumannii (ATCC 19606 2016)
GCA_900011295.1		 n/a n/a n/a n/a 39.06
(99.99 %)		 2
(0.00 %)		 116
(100.00 %)		 n/a 134
(0.56 %)		 22,549
(11.48 %)		 46
(0.85 %)
8 Actinobacillus pleuropneumoniae serovar 5b (L20 2007)
GCA_000015885.1		 n/a n/a n/a n/a 41.30
(100.00 %)		 n/a 1
(100.00 %)		 n/a 62
(0.39 %)		 11,379
(9.68 %)		 0
(0.00 %)
9 Aeromonas hydrophila subsp. hydrophila (ATCC 7966 2006)
GCF_000014805.1		 n/a n/a n/a n/a 61.55
(100.00 %)		 n/a 1
(100.00 %)		 n/a 155
(0.74 %)		 38,147
(17.15 %)		 1
(100.00 %)
10 Allokutzneria albata (DSM 44149 2016)
GCF_900103775.1		 n/a n/a n/a n/a 70.26
(100.00 %)		 1
(0.00 %)		 1
(100.00 %)		 n/a 451
(0.41 %)		 77,239
(22.27 %)		 1
(100.00 %)
11 Anaplasma centrale str. (Israel 2009)
GCF_000024505.1		 n/a n/a n/a n/a 49.98
(100.00 %)		 n/a 1
(100.00 %)		 n/a 42
(0.53 %)		 1,912
(2.27 %)		 367
(40.51 %)
12 Anaplasma marginale str. (Florida 2009)
GCF_000020305.1		 n/a n/a n/a n/a 49.77
(100.00 %)		 n/a 1
(100.00 %)		 n/a 62
(1.39 %)		 2,436
(3.07 %)		 340
(44.31 %)
13 Anaplasma marginale str. (St. Maries 2004)
GCF_000011945.1		 n/a n/a n/a n/a 49.76
(100.00 %)		 n/a 1
(100.00 %)		 n/a 57
(0.92 %)		 2,261
(2.83 %)		 318
(44.56 %)
14 Anaplasma marginale str. (St. Maries 2011)
GCF_000215525.1		 n/a n/a n/a n/a 49.79
(99.99 %)		 n/a 60
(100.00 %)		 n/a 40
(0.19 %)		 2,461
(3.08 %)		 314
(44.94 %)
15 Anaplasma marginale (Palmeira 2018)
GCA_003515675.1		 n/a n/a n/a n/a 49.76
(99.98 %)		 1,011
(0.15 %)		 1,011
(99.85 %)		 n/a 63
(1.23 %)		 2,330
(2.87 %)		 348
(41.50 %)
16 Anaplasma phagocytophilum str. (HGE1 2013)
GCA_000478425.1		 n/a n/a n/a n/a 41.63
(100.00 %)		 n/a 2
(100.00 %)		 n/a 81
(1.57 %)		 2,625
(6.01 %)		 23
(0.57 %)
17 Arthrobacter sp. SLBN-53 (NRRL B-3805 2016)
GCA_001580405.1		 n/a n/a n/a n/a 66.89
(100.00 %)		 n/a 1
(100.00 %)		 n/a 424
(0.41 %)		 44,060
(18.81 %)		 1
(100.00 %)
18 Bacillus mojavensis (PS17 2020)
GCA_016413745.1		 n/a n/a n/a n/a 43.87
(100.00 %)		 n/a 1
(100.00 %)		 n/a 75
(0.20 %)		 23,826
(11.33 %)		 197
(2.85 %)
19 Bacillus subtilis (NCD-2 2017)
GCA_002556525.1		 n/a n/a n/a n/a 43.53
(100.00 %)		 n/a 1
(100.00 %)		 n/a 64
(0.12 %)		 23,678
(11.00 %)		 227
(3.62 %)
20 Bacillus subtilis strain 168
GCF_000009045.1		 n/a n/a n/a n/a 43.51
(100.00 %)		 n/a 1
(100.00 %)		 n/a 55
(0.10 %)		 23,994
(11.04 %)		 232
(3.62 %)
21 Bdellovibrio bacteriovorus (HD100 2004)
GCF_000196175.1		 n/a n/a n/a n/a 50.65
(100.00 %)		 n/a 11
(100.00 %)		 n/a 71
(0.12 %)		 14,116
(6.35 %)		 2
(99.83 %)
22 Brucella canis (ATCC 23365 2007)
GCF_000018525.1		 n/a n/a n/a n/a 57.24
(100.00 %)		 n/a 2
(100.00 %)		 n/a 90
(0.15 %)		 16,838
(9.39 %)		 2
(99.97 %)
23 Brucella suis (ATCC 23445 2007)
GCF_000018905.1		 n/a n/a n/a n/a 57.21
(100.00 %)		 n/a 2
(100.00 %)		 n/a 106
(0.21 %)		 16,434
(9.10 %)		 2
(99.97 %)
24 Burkholderia multivorans (ATCC 17616 2007)
GCA_000018505.1		 n/a n/a n/a n/a 66.69
(100.00 %)		 n/a 4
(100.00 %)		 n/a 769
(0.91 %)		 72,959
(35.08 %)		 4
(100.00 %)
25 Campylobacter jejuni subsp. jejuni ATCC 700819 (NCTC 11168 2003)
GCF_000009085.1		 n/a n/a n/a n/a 30.55
(100.00 %)		 n/a 1
(100.00 %)		 n/a 69
(0.33 %)		 16,429
(28.46 %)		 4
(0.22 %)
26 Candidatus Vesicomyosocius sp. (SY067_SCS001 2020)
GCF_014706615.1		 n/a n/a n/a n/a 31.16
(100.00 %)		 n/a 1
(100.00 %)		 n/a 62
(0.55 %)		 8,857
(17.90 %)		 3
(0.13 %)
27 Chlamydia trachomatis (L2/434/Bu 2008)
GCF_000068585.1		 n/a n/a n/a n/a 41.33
(100.00 %)		 n/a 1
(100.00 %)		 n/a 13
(0.14 %)		 5,126
(8.81 %)		 9
(0.47 %)
28 Clostridioides difficile (630 2017)
GCF_000009205.2		 n/a n/a n/a n/a 29.06
(100.00 %)		 n/a 2
(100.00 %)		 n/a 630
(1.16 %)		 38,168
(24.03 %)		 47
(0.94 %)
29 Clostridium beijerinckii (DSM 791 2021)
GCF_018223745.1		 n/a n/a n/a n/a 29.87
(100.00 %)		 n/a 2
(100.00 %)		 n/a 364
(0.57 %)		 50,825
(22.06 %)		 48
(0.88 %)
30 Clostridium butyricum (DSM 10702 2020)
GCA_014131795.1		 n/a n/a n/a n/a 28.74
(100.00 %)		 n/a 4
(100.00 %)		 n/a 297
(0.36 %)		 45,671
(25.32 %)		 37
(0.56 %)
31 Clostridium saccharoperbutylacetonicum N1-4HMT (ATCC 27021 2013)
GCF_000334435.1		 n/a n/a n/a n/a 29.43
(99.99 %)		 2
(0.00 %)		 212
(100.00 %)		 n/a 401
(0.42 %)		 57,640
(22.92 %)		 7
(0.08 %)
32 Clostridium tyrobutyricum (KCTC 5387 2016 KAIST)
GCF_001642655.1		 n/a n/a n/a n/a 31.01
(100.00 %)		 n/a 2
(100.00 %)		 n/a 163
(0.26 %)		 27,424
(21.32 %)		 20
(0.48 %)
33 Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 DOE-JGI)
GCF_000429805.1		 n/a n/a n/a n/a 30.84
(99.97 %)		 1
(0.03 %)		 45
(99.97 %)		 n/a 150
(0.23 %)		 26,457
(21.36 %)		 4
(0.08 %)
34 Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 Nanjing Univ. of Technology)
GCF_000359585.1		 n/a n/a n/a n/a 30.84
(100.00 %)		 n/a 76
(100.00 %)		 n/a 164
(0.26 %)		 26,260
(21.27 %)		 3
(0.08 %)
35 Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 Univ. Cattolica del Sacro Cuore)
GCF_000392375.2		 n/a n/a n/a n/a 30.82
(99.99 %)		 n/a 174
(100.00 %)		 n/a 142
(0.20 %)		 26,073
(21.16 %)		 5
(0.09 %)
36 Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2015 Tokyo Univ. Marine Science and Technology)
GCA_000974305.1		 n/a n/a n/a n/a 31.78
(99.94 %)		 7
(0.00 %)		 704
(100.00 %)		 n/a 89
(0.14 %)		 20,221
(18.24 %)		 3
(0.09 %)
37 Companilactobacillus crustorum (MN047 2017)
GCF_001951175.1		 n/a n/a n/a n/a 35.08
(100.00 %)		 n/a 3
(100.00 %)		 n/a 53
(0.18 %)		 14,270
(12.47 %)		 10
(0.45 %)
38 Corynebacterium glutamicum (ATCC 13032 2004)
GCA_000011325.1		 n/a n/a n/a n/a 53.81
(100.00 %)		 n/a 1
(100.00 %)		 n/a 118
(0.18 %)		 8,376
(4.25 %)		 1
(99.99 %)
39 Cupriavidus necator (H16 2019)
GCF_004798725.1		 n/a n/a n/a n/a 66.34
(100.00 %)		 n/a 3
(100.00 %)		 n/a 321
(0.29 %)		 70,082
(25.88 %)		 3
(100.00 %)
40 cyanobacteria (ATCC 29133; PCC 73102 2008)
GCF_000020025.1		 n/a n/a n/a n/a 41.35
(100.00 %)		 n/a 6
(100.00 %)		 n/a 1,488
(1.72 %)		 39,950
(9.56 %)		 469
(2.37 %)
41 cyanobacteria (PCC 7942 2005)
GCF_000012525.1		 n/a n/a n/a n/a 55.43
(100.00 %)		 n/a 2
(100.00 %)		 n/a 26
(0.22 %)		 17,265
(12.56 %)		 2
(99.96 %)
42 cyanobacteria (SAG 85.79 2020 genbank)
GCA_012516315.1		 n/a n/a n/a n/a 44.88
(100.00 %)		 n/a 1
(100.00 %)		 n/a 2,190
(7.56 %)		 20,467
(13.93 %)		 1,030
(9.44 %)
43 cyanobacteria (SAG 85.79 2020 refseq)
GCF_012516315.1		 n/a n/a n/a n/a 44.88
(100.00 %)		 n/a 1
(100.00 %)		 n/a 2,190
(7.56 %)		 20,467
(13.93 %)		 1,030
(9.44 %)
44 Desulfovibrio desulfuricans (DSM 642 2013)
GCA_000420465.1		 n/a n/a n/a n/a 57.36
(100.00 %)		 n/a 20
(100.00 %)		 n/a 63
(0.09 %)		 21,875
(12.13 %)		 51
(97.19 %)
45 Desulfovibrio vulgaris str. (Hildenborough 2004)
GCA_000195755.1		 n/a n/a n/a n/a 63.28
(100.00 %)		 n/a 2
(100.00 %)		 n/a 241
(0.36 %)		 18,967
(8.89 %)		 2
(100.00 %)
46 Dinoroseobacter shibae DSM 16493 (DFL 12 2007)
GCF_000018145.1		 n/a n/a n/a n/a 65.52
(100.00 %)		 n/a 6
(100.00 %)		 n/a 156
(0.20 %)		 34,139
(16.62 %)		 6
(99.97 %)
47 E. coli (B C2566 2016)
GCF_001559615.2		 n/a n/a n/a n/a 50.81
(100.00 %)		 n/a 1
(100.00 %)		 n/a 78
(0.39 %)		 18,625
(7.36 %)		 1
(100.00 %)
48 E. coli (B C3029 2016)
GCF_001559635.1		 n/a n/a n/a n/a 50.82
(100.00 %)		 n/a 1
(100.00 %)		 n/a 77
(0.38 %)		 18,158
(6.98 %)		 1
(100.00 %)
49 E. coli (BE104 2019)
GCF_005890115.1		 n/a n/a n/a n/a 50.76
(100.00 %)		 n/a 1
(100.00 %)		 n/a 102
(0.49 %)		 19,984
(7.40 %)		 1
(99.99 %)
50 E. coli (BL21(DE3) 2010)
GCA_000022665.2		 n/a n/a n/a n/a 50.83
(100.00 %)		 n/a 1
(100.00 %)		 n/a 77
(0.38 %)		 18,815
(7.35 %)		 1
(99.99 %)
51 E. coli (K-12 BW25113 2014 refseq)
GCF_000750555.1		 n/a n/a n/a n/a 50.78
(100.00 %)		 n/a 1
(100.00 %)		 n/a 90
(0.38 %)		 19,508
(7.44 %)		 1
(99.99 %)
52 E. coli (K-12 C3026 2016)
GCF_001559675.1		 n/a n/a n/a n/a 50.76
(100.00 %)		 n/a 2
(100.00 %)		 n/a 102
(0.44 %)		 20,688
(7.36 %)		 12
(99.19 %)
53 E. coli (K-12 DHB4 2016)
GCF_001559655.1		 n/a n/a n/a n/a 50.73
(100.00 %)		 n/a 2
(100.00 %)		 n/a 100
(0.44 %)		 20,468
(7.59 %)		 2
(99.99 %)
54 E. coli (K-12 MG1655 2013 refseq)
GCF_000005845.2		 n/a n/a n/a n/a 50.79
(100.00 %)		 n/a 1
(100.00 %)		 n/a 93
(0.40 %)		 19,730
(7.53 %)		 1
(99.99 %)
55 E. coli (Nissle 1917 2014)
GCA_000714595.1		 n/a n/a n/a n/a 50.58
(100.00 %)		 79
(0.00 %)		 80
(100.00 %)		 n/a 183
(1.59 %)		 18,242
(6.52 %)		 1
(99.97 %)
56 E. coli (Sakai substr. RIMD 0509952 2018)
GCF_000008865.2		 n/a n/a n/a n/a 50.48
(100.00 %)		 n/a 3
(100.00 %)		 n/a 169
(0.53 %)		 20,656
(7.31 %)		 15
(99.26 %)
57 Ehrlichia chaffeensis str. (Arkansas 2006)
GCF_000013145.1		 n/a n/a n/a n/a 30.10
(100.00 %)		 n/a 1
(100.00 %)		 213
(1.10 %)		 157
(4.45 %)		 8,909
(15.31 %)		 2
(0.04 %)
58 Gluconacetobacter diazotrophicus PA1 5 (PAl 5; ATCC 49037 2008)
GCF_000021325.1		 n/a n/a n/a n/a 66.32
(100.00 %)		 n/a 2
(100.00 %)		 n/a 240
(0.34 %)		 33,532
(20.48 %)		 2
(99.98 %)
59 Heyndrickxia coagulans DSM 1 (ATCC 7050 2015)
GCF_000832905.1		 n/a n/a n/a n/a 46.90
(100.00 %)		 n/a 1
(100.00 %)		 n/a 152
(0.81 %)		 19,985
(12.30 %)		 0
(0.00 %)
60 Janthinobacterium (BJB1 2017)
GCA_002735775.2		 n/a n/a n/a n/a 63.35
(100.00 %)		 n/a 56
(100.00 %)		 n/a 326
(0.37 %)		 62,065
(27.35 %)		 53
(99.81 %)
61 Janthinobacterium (BJB312 2017)
GCA_002735715.1		 n/a n/a n/a n/a 62.61
(100.00 %)		 n/a 38
(100.00 %)		 n/a 324
(0.49 %)		 60,023
(25.47 %)		 40
(99.53 %)
62 Klebsiella aerogenes (KCTC 2190 2011)
GCA_000215745.1		 n/a n/a n/a n/a 54.85
(100.00 %)		 1
(0.00 %)		 2
(100.00 %)		 n/a 121
(0.42 %)		 34,291
(14.01 %)		 8
(99.38 %)
63 Klebsiella pneumoniae (ATCC BAA-2146 2016)
GCA_000364385.3		 n/a n/a n/a n/a 56.97
(100.00 %)		 n/a 5
(100.00 %)		 n/a 120
(0.47 %)		 42,179
(16.44 %)		 33
(99.46 %)
64 Lacticaseibacillus paracasei (LC2W 2011)
GCA_000194785.1		 n/a n/a n/a n/a 46.31
(100.00 %)		 n/a 2
(100.00 %)		 n/a 59
(0.29 %)		 10,445
(5.82 %)		 53
(0.81 %)
65 Lactobacillus kefiranofaciens (1207 2020)
GCF_014656585.1		 n/a n/a n/a n/a 37.62
(100.00 %)		 n/a 3
(100.00 %)		 n/a 97
(0.34 %)		 11,430
(10.46 %)		 33
(1.49 %)
66 Lactobacillus kefiranofaciens (ASM131133v1 JCM 8572 JSM 10550 2015)
GCA_001311335.1		 n/a n/a n/a n/a 37.41
(99.99 %)		 n/a 104
(100.00 %)		 n/a 78
(0.24 %)		 11,724
(11.51 %)		 29
(0.68 %)
67 Lactobacillus kefiranofaciens (ASM143419v1 JCM 8572 DSM 10550 2015)
GCA_001434195.1		 n/a n/a n/a n/a 37.47
(99.97 %)		 6
(0.01 %)		 138
(100.00 %)		 n/a 81
(0.24 %)		 11,892
(11.46 %)		 30
(0.69 %)
68 Lactobacillus kefiranofaciens (ATCC 43761 2016)
GCA_900103655.1		 n/a n/a n/a n/a 37.21
(99.99 %)		 2
(0.01 %)		 84
(100.00 %)		 n/a 112
(0.27 %)		 12,848
(11.34 %)		 27
(0.54 %)
69 Lactobacillus kefiranofaciens (JCM 6985 DSM 5016 2014)
GCA_000615685.1		 n/a n/a n/a n/a 37.21
(99.99 %)		 n/a 123
(100.00 %)		 n/a 115
(0.27 %)		 12,912
(11.58 %)		 28
(0.57 %)
70 Lactobacillus kefiranofaciens (JCM 6985 DSM 5016 2015)
GCA_001435275.1		 n/a n/a n/a n/a 37.22
(99.99 %)		 10
(0.00 %)		 133
(100.00 %)		 n/a 117
(0.30 %)		 12,967
(11.63 %)		 28
(0.56 %)
71 Lactobacillus kefiranofaciens (KR 2017)
GCA_002276565.1		 n/a n/a n/a n/a 37.40
(99.99 %)		 n/a 97
(100.00 %)		 n/a 106
(0.37 %)		 12,540
(11.80 %)		 27
(0.61 %)
72 Lactobacillus kefiranofaciens (LKK75 2019)
GCA_009184665.1		 n/a n/a n/a n/a 37.38
(100.00 %)		 n/a 1
(100.00 %)		 n/a 113
(0.28 %)		 13,039
(11.33 %)		 30
(1.19 %)
73 Lactobacillus kefiranofaciens (ZW3 2011)
GCA_000214785.1		 n/a n/a n/a n/a 37.36
(100.00 %)		 n/a 3
(100.00 %)		 n/a 120
(0.29 %)		 12,963
(11.07 %)		 31
(1.17 %)
74 Lactococcus lactis (IL1403 2018)
GCA_003722275.1		 n/a n/a n/a n/a 35.33
(100.00 %)		 1
(0.00 %)		 2
(100.00 %)		 n/a 85
(0.42 %)		 17,438
(16.62 %)		 32
(0.72 %)
75 Legionella pneumophila (Leg01/16 2013 genbank)
GCA_000468235.1		 n/a n/a n/a n/a 38.19
(99.97 %)		 n/a 581
(100.00 %)		 n/a 67
(0.19 %)		 24,003
(13.13 %)		 18
(0.28 %)
76 Legionella pneumophila (Leg01/16 2013 refseq)
GCF_000468235.1		 n/a n/a n/a n/a 38.19
(99.97 %)		 n/a 581
(100.00 %)		 n/a 67
(0.19 %)		 24,003
(13.13 %)		 18
(0.28 %)
77 Legionella pneumophila (Lpm7613 Lpm7613 2016)
GCF_900092465.1		 n/a n/a n/a n/a 38.24
(100.00 %)		 n/a 2
(100.00 %)		 n/a 60
(0.69 %)		 22,513
(13.32 %)		 22
(0.98 %)
78 Leuconostoc citreum (KM20 2008)
GCA_000026405.1		 n/a n/a n/a n/a 38.87
(100.00 %)		 n/a 5
(100.00 %)		 n/a 48
(0.46 %)		 8,656
(8.35 %)		 19
(1.37 %)
79 Limosilactobacillus fermentum AGR1485
GCF_011032765.1		 n/a n/a n/a n/a 51.15
(100.00 %)		 n/a 1
(100.00 %)		 n/a 68
(1.17 %)		 5,312
(5.45 %)		 1
(99.98 %)
80 Limosilactobacillus fermentum AGR1487
GCF_011032745.1		 n/a n/a n/a n/a 52.17
(100.00 %)		 n/a 1
(100.00 %)		 n/a 43
(0.27 %)		 5,358
(4.69 %)		 0
(0.00 %)
81 Limosilactobacillus fermentum SRCM 103290
GCF_004063635.1		 n/a n/a n/a n/a 51.37
(100.00 %)		 n/a 1
(100.00 %)		 n/a 61
(0.23 %)		 5,590
(4.50 %)		 1
(97.52 %)
82 Limosilactobacillus fermentum YL-11
GCF_003860425.1		 n/a n/a n/a n/a 51.94
(100.00 %)		 n/a 1
(100.00 %)		 n/a 46
(0.65 %)		 5,855
(5.79 %)		 1
(99.97 %)
83 Lysinibacillus sphaericus (C3-41 2008)
GCA_000017965.1		 n/a n/a n/a n/a 37.13
(100.00 %)		 n/a 2
(100.00 %)		 n/a 121
(0.31 %)		 30,334
(12.48 %)		 21
(1.17 %)
84 Methylococcus capsulatus str. (Bath 2005)
GCF_000008325.1		 n/a n/a n/a n/a 63.58
(100.00 %)		 1
(0.00 %)		 2
(100.00 %)		 n/a 65
(0.15 %)		 19,567
(11.24 %)		 1
(100.00 %)
85 Methylorubrum extorquens (CM4 2008)
GCA_000021845.1		 n/a n/a n/a n/a 68.08
(100.00 %)		 n/a 3
(100.00 %)		 n/a 361
(0.37 %)		 55,843
(22.73 %)		 3
(100.00 %)
86 Mycobacterium avium (hominissuis A5 2014)
GCF_000696715.1		 n/a n/a n/a n/a 69.40
(100.00 %)		 n/a 50
(100.00 %)		 n/a 550
(0.52 %)		 51,968
(27.34 %)		 50
(99.99 %)
87 Mycobacterium palustre (DSM 44572 2017)
GCF_002101785.1		 n/a n/a n/a n/a 68.50
(99.99 %)		 n/a 158
(100.00 %)		 n/a 585
(0.53 %)		 55,559
(24.92 %)		 158
(99.93 %)
88 Mycoplasmoides pneumoniae (M129-B7 2015)
GCF_000331085.3		 n/a n/a n/a n/a 40.01
(100.00 %)		 3
(0.00 %)		 4
(100.00 %)		 n/a 50
(0.39 %)		 4,116
(9.12 %)		 36
(4.75 %)
89 Mycobacterium sp. (VKM Ac-1817D 2014)
GCA_000416365.2		 n/a n/a n/a n/a 66.20
(100.00 %)		 n/a 1
(100.00 %)		 n/a 261
(0.21 %)		 49,141
(17.12 %)		 1
(100.00 %)
90 Mycobacterium tuberculosis (ASM19595v2 H37Rv 2013)
GCF_000195955.2		 n/a n/a n/a n/a 65.61
(100.00 %)		 n/a 1
(100.00 %)		 n/a 1,059
(1.47 %)		 34,168
(17.69 %)		 1
(100.00 %)
91 Mycobacterium tuberculosis (ASM27773v2 H37Rv 2013)
GCA_000277735.2		 n/a n/a n/a n/a 65.62
(100.00 %)		 n/a 1
(100.00 %)		 n/a 1,067
(1.49 %)		 34,174
(17.70 %)		 1
(100.00 %)
92 Mycobacterium tuberculosis (H37Rv 2013)
GCF_000277735.2		 n/a n/a n/a n/a 65.62
(100.00 %)		 n/a 1
(100.00 %)		 n/a 1,067
(1.49 %)		 34,174
(17.70 %)		 1
(100.00 %)
93 Mycobacterium tuberculosis (GReAT_CRyPTIC_Unmapped_H37Rv 2023)
GCF_963525475.1		 n/a n/a n/a n/a 65.60
(100.00 %)		 n/a 1
(100.00 %)		 n/a 1,114
(1.68 %)		 34,720
(17.82 %)		 1
(100.00 %)
94 Mycobacterium tuberculosis (MTb-Oman-3215873 2023)
GCF_030566675.1		 n/a n/a n/a n/a 65.29
(100.00 %)		 n/a 1
(100.00 %)		 n/a 1,000
(2.30 %)		 35,591
(17.10 %)		 1
(100.00 %)
95 Neisseria meningitidis (Z2491 2003)
GCA_000009105.1		 n/a n/a n/a n/a 51.81
(100.00 %)		 n/a 1
(100.00 %)		 n/a 190
(1.51 %)		 13,500
(15.34 %)		 1
(99.91 %)
96 Nitratireductor (SY7 2020)
GCA_007922615.2		 n/a n/a n/a n/a 64.89
(100.00 %)		 n/a 1
(100.00 %)		 n/a 129
(0.29 %)		 43,679
(19.65 %)		 1
(100.00 %)
97 Nitrosomonas europaea (ATCC 19718 2003)
GCA_000009145.1		 n/a n/a n/a n/a 50.72
(100.00 %)		 n/a 1
(100.00 %)		 n/a 68
(0.39 %)		 8,683
(6.11 %)		 1
(99.98 %)
98 Paenibacillus larvae subsp. larvae (Eric_IV 2018)
GCF_002951935.1		 n/a n/a n/a n/a 44.20
(100.00 %)		 n/a 3
(100.00 %)		 n/a 120
(0.40 %)		 14,781
(7.06 %)		 630
(11.68 %)
99 Pectobacterium brasiliense (1692 2020)
GCA_009873295.1		 n/a n/a n/a n/a 52.15
(100.00 %)		 n/a 1
(100.00 %)		 n/a 157
(0.66 %)		 21,754
(7.97 %)		 1
(100.00 %)
100 Pimelobacter simplex (VKM Ac-2033D 2014)
GCF_000785495.1		 n/a n/a n/a n/a 72.85
(100.00 %)		 n/a 1
(100.00 %)		 n/a 948
(1.07 %)		 56,104
(27.60 %)		 1
(100.00 %)
101 Plasmodium malariae (2016)
GCF_900090045.1		 5,965
(37.07 %)		 n/a n/a n/a 24.38
(100.00 %)		 n/a 62
(100.00 %)		 n/a 47,855
(7.58 %)		 320,327
(54.68 %)		 21
(0.02 %)
102 Pseudomonas aeruginosa (PAO1 2006)
GCF_000006765.1		 n/a n/a n/a n/a 66.56
(100.00 %)		 n/a 1
(100.00 %)		 n/a 208
(0.43 %)		 58,643
(23.70 %)		 1
(100.00 %)
103 Pseudomonas fluorescens (SBW25 2009)
GCF_000009225.2		 n/a n/a n/a n/a 60.50
(100.00 %)		 n/a 1
(100.00 %)		 n/a 225
(0.43 %)		 44,434
(14.25 %)		 0
(0.00 %)
104 Rhodobacter capsulatus (SB 1003 2010)
GCF_000021865.1		 n/a n/a n/a n/a 66.56
(100.00 %)		 n/a 2
(100.00 %)		 n/a 306
(0.50 %)		 37,423
(23.53 %)		 2
(100.00 %)
105 Rhodococcus erythropolis (CCM2595 2013)
GCA_000454045.1		 n/a n/a n/a n/a 62.45
(100.00 %)		 n/a 2
(100.00 %)		 n/a 461
(0.39 %)		 37,291
(12.05 %)		 2
(100.00 %)
106 Rhodococcus qingshengii (IGTS8 2019)
GCF_006384225.1		 n/a n/a n/a n/a 62.38
(98.88 %)		 27
(1.12 %)		 25
(100.00 %)		 n/a 455
(0.37 %)		 41,574
(12.30 %)		 25
(99.99 %)
107 Salmonella enterica (Typhimurium LT2 2016)
GCF_000006945.2		 n/a n/a n/a n/a 52.24
(100.00 %)		 n/a 2
(100.00 %)		 n/a 77
(0.25 %)		 25,684
(9.55 %)		 2
(99.99 %)
108 Salmonella enterica subsp. enterica serovar Typhimurium str. (14028S 2009)
GCA_000022165.1		 n/a n/a n/a n/a 52.21
(100.00 %)		 n/a 2
(100.00 %)		 n/a 80
(0.24 %)		 25,976
(9.65 %)		 2
(99.99 %)
109 Shewanella oneidensis (MR-1 2012)
GCF_000146165.2		 n/a n/a n/a n/a 45.89
(100.00 %)		 8
(0.00 %)		 10
(100.00 %)		 n/a 193
(0.56 %)		 6,704
(4.54 %)		 401
(8.15 %)
110 Shigella flexneri 2a str. (301 2011)
GCF_000006925.2		 n/a n/a n/a n/a 50.65
(100.00 %)		 1
(0.00 %)		 3
(100.00 %)		 n/a 88
(0.35 %)		 14,141
(8.30 %)		 18
(97.13 %)
111 Shigella flexneri 5a (M90T 2019)
GCA_004799585.1		 n/a n/a n/a n/a 50.67
(100.00 %)		 n/a 2
(100.00 %)		 n/a 76
(0.22 %)		 13,570
(7.88 %)		 19
(97.31 %)
112 Sodalis glossinidius str. (morsitans 2006)
GCF_000010085.1		 n/a n/a n/a n/a 54.50
(100.00 %)		 n/a 4
(100.00 %)		 n/a 120
(0.20 %)		 22,713
(10.83 %)		 9
(98.81 %)
113 Staphylococcus aureus (JE2 2017)
GCA_002085525.1		 n/a n/a n/a n/a 32.78
(100.00 %)		 n/a 1
(100.00 %)		 n/a 138
(1.03 %)		 22,355
(16.38 %)		 11
(0.54 %)
114 Staphylococcus epidermidis (BCM-HMP0060 2009)
GCF_000159575.1		 n/a n/a n/a n/a 31.93
(97.96 %)		 69
(2.04 %)		 115
(97.96 %)		 n/a 109
(0.37 %)		 20,000
(16.77 %)		 13
(0.29 %)
115 Streptococcus pneumoniae (D39V 2018)
GCF_003003495.1		 n/a n/a n/a n/a 39.71
(100.00 %)		 n/a 1
(100.00 %)		 n/a 83
(0.62 %)		 9,475
(9.44 %)		 27
(0.83 %)
116 Streptomyces ambofaciens (ATCC 23877 2015)
GCF_001267885.1		 n/a n/a n/a n/a 72.19
(100.00 %)		 n/a 2
(100.00 %)		 n/a 2,423
(1.48 %)		 74,062
(23.83 %)		 2
(100.00 %)
117 Streptomyces ambofaciens (DSM 40697 2016)
GCF_001632865.1		 n/a n/a n/a n/a 72.33
(100.00 %)		 n/a 1
(100.00 %)		 n/a 2,321
(1.52 %)		 72,368
(23.98 %)		 1
(100.00 %)
118 Streptomyces avermitilis NBRC 14893 (MA-4680 2016)
GCF_000009765.2		 n/a n/a n/a n/a 70.70
(100.00 %)		 n/a 2
(100.00 %)		 n/a 2,947
(1.57 %)		 78,079
(22.08 %)		 2
(100.00 %)
119 Streptomyces bottropensis (ATCC 25435 2013)
GCA_000383595.1		 n/a n/a n/a n/a 71.19
(100.00 %)		 7
(0.00 %)		 4
(100.00 %)		 n/a 2,224
(1.21 %)		 78,043
(22.95 %)		 1
(100.00 %)
120 Streptomyces curacoi (DSM 40107 2016)
GCF_001513975.1		 n/a n/a n/a n/a 70.99
(99.87 %)		 22
(0.13 %)		 53
(99.87 %)		 n/a 1,949
(1.31 %)		 72,708
(22.19 %)		 31
(99.98 %)
121 Streptomyces mobaraensis (DSM 40587 2021)
GCF_020099395.1		 n/a n/a n/a n/a 73.06
(100.00 %)		 n/a 2
(100.00 %)		 n/a 2,563
(1.62 %)		 72,219
(28.80 %)		 2
(100.00 %)
122 Streptomyces parvulus (2297 2016)
GCF_001660045.1		 n/a n/a n/a n/a 72.73
(100.00 %)		 n/a 2
(100.00 %)		 n/a 1,266
(0.88 %)		 72,888
(26.01 %)		 2
(100.00 %)
123 Stutzerimonas degradans (XL272 2019)
GCA_009740185.1		 n/a n/a n/a n/a 64.69
(100.00 %)		 n/a 1
(100.00 %)		 n/a 77
(0.17 %)		 35,942
(20.69 %)		 1
(100.00 %)
TOTALS:total assembly count 123

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 224 assemblies assembly stats track stats
Mammals 678 assemblies assembly stats track stats
Birds 432 assemblies assembly stats track stats
Fishes 488 assemblies assembly stats track stats
other vertebrates 311 assemblies assembly stats track stats
Invertebrates 1158 assemblies assembly stats track stats
Plants 313 assemblies assembly stats track stats
Fungi 921 assemblies assembly stats track stats
Viruses 421 assemblies assembly stats track stats
Bacteria 123 assemblies assembly stats track stats
legacy/superseded 580 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1222 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 96 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 974 assemblies assembly stats track stats