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Assemblies from NCBI/Genbank/Refseq sources, subset of primates only.
| count | common name link to genome browser |
ncbiRefSeq | xenoRefGene | augustus genes |
Ensembl genes |
gc5 base | gaps | assembly sequences |
Repeat Masker |
TRF simpleRepeat |
window Masker |
cpg islands |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Angolan colobus GCF_000951035.1 |
42,929 (2.28 %) |
20,358 (1.94 %) |
18,701 (1.25 %) |
47,034 (1.83 %) |
40.80 (90.25 %) |
184,001 (9.77 %) |
197,124 (90.23 %) |
5,089,134 (49.30 %) |
752,280 (2.06 %) |
15,645,270 (32.03 %) |
59,852 (0.82 %) |
| 2 | aye-aye GCA_004027145.1 |
n/a | 20,687 (1.84 %) |
25,007 (1.35 %) |
37,179 (1.61 %) |
39.96 (99.96 %) |
2,527 (0.01 %) |
344,978 (99.99 %) |
4,030,997 (43.30 %) |
358,965 (0.72 %) |
15,568,152 (32.48 %) |
36,248 (1.03 %) |
| 3 | babakoto GCA_004363605.1 |
n/a | 23,765 (1.47 %) |
45,432 (1.22 %) |
n/a | 41.26 (99.89 %) |
4,885 (0.02 %) |
1,248,425 (99.98 %) |
4,664,535 (39.88 %) |
529,666 (1.21 %) |
16,469,880 (32.15 %) |
71,607 (1.62 %) |
| 4 | black snub-nosed monkey (Rb0 v2 refseq 2016) GCF_001698545.2 |
59,194 (2.48 %) |
21,210 (1.88 %) |
22,226 (1.22 %) |
n/a | 40.93 (94.12 %) |
149,839 (5.89 %) |
103,881 (100.00 %) |
5,531,353 (50.33 %) |
991,662 (2.45 %) |
16,353,330 (34.27 %) |
80,076 (1.15 %) |
| 5 | black-handed spider monkey GCA_004024785.1 |
n/a | 25,398 (1.69 %) |
39,133 (1.17 %) |
36,843 (0.90 %) |
40.69 (99.91 %) |
9,415 (0.03 %) |
878,490 (99.97 %) |
5,570,166 (47.38 %) |
971,371 (2.96 %) |
16,050,074 (38.92 %) |
35,079 (0.81 %) |
| 6 | Bolivian titi GCA_004027715.1 |
n/a | 25,728 (1.58 %) |
43,866 (1.11 %) |
n/a | 41.02 (99.91 %) |
7,382 (0.02 %) |
1,041,365 (99.98 %) |
5,701,983 (47.08 %) |
971,231 (2.78 %) |
16,165,964 (39.80 %) |
58,357 (1.13 %) |
| 7 | Bolivian squirrel monkey (100643 v2.1 BCM 2021) GCF_016699345.2 |
53,017 (2.41 %) |
20,575 (1.98 %) |
21,201 (1.34 %) |
n/a | 40.96 (99.56 %) |
1,073 (0.44 %) |
2,786 (99.56 %) |
5,041,616 (47.75 %) |
946,197 (3.04 %) |
14,604,089 (36.98 %) |
37,271 (1.03 %) |
| 8 | Bornean orangutan (AG05252 primary hap 2023) GCF_028885625.1 |
81,966 (2.93 %) |
20,794 (1.72 %) |
21,307 (1.13 %) |
n/a | 41.13 (99.86 %) |
39 (0.14 %) |
1,593 (99.86 %) |
5,651,267 (54.21 %) |
1,155,151 (9.33 %) |
16,242,823 (42.82 %) |
52,294 (2.02 %) |
| 9 | brown lemur GCA_004027275.1 |
n/a | 25,130 (1.40 %) |
50,986 (1.20 %) |
n/a | 41.37 (99.87 %) |
3,706 (0.01 %) |
1,697,619 (99.99 %) |
4,981,207 (40.80 %) |
1,645,565 (2.98 %) |
15,859,279 (37.12 %) |
71,873 (1.66 %) |
| 10 | chimpanzee (Clint C0471 2018) GCF_002880755.1 |
102,471 (3.40 %) |
20,506 (1.82 %) |
22,412 (1.23 %) |
n/a | 40.71 (98.96 %) |
715 (1.04 %) |
5,254 (98.96 %) |
5,367,697 (53.49 %) |
996,217 (7.30 %) |
16,057,940 (39.54 %) |
46,151 (0.97 %) |
| 11 | chimpanzee (AG18354 primary hap 2023) GCF_028858775.1 |
111,282 (4.36 %) |
20,990 (1.75 %) |
21,705 (1.15 %) |
n/a | 40.94 (99.90 %) |
29 (0.10 %) |
1,500 (99.90 %) |
5,581,205 (50.06 %) |
1,158,792 (10.59 %) |
15,972,274 (43.09 %) |
61,901 (2.29 %) |
| 12 | Coquerel's mouse lemur GCA_004024645.1 |
n/a | 24,097 (1.75 %) |
40,335 (1.41 %) |
n/a | 40.86 (99.92 %) |
10,667 (0.05 %) |
451,546 (99.95 %) |
4,093,701 (41.14 %) |
571,851 (1.36 %) |
14,292,721 (33.40 %) |
70,569 (2.29 %) |
| 13 | Coquerel's sifaka 6110/Marcella (2015 refseq) GCF_000956105.1 |
29,369 (2.19 %) |
19,298 (2.12 %) |
21,783 (1.63 %) |
n/a | 41.24 (74.51 %) |
276,544 (25.53 %) |
299,070 (74.47 %) |
3,419,964 (39.32 %) |
304,035 (0.59 %) |
13,333,892 (21.06 %) |
56,694 (1.59 %) |
| 14 | crab-eating macaque (2020 cy0333) GCA_011100615.1 |
n/a | 20,178 (1.86 %) |
20,316 (1.21 %) |
66,582 (2.60 %) |
41.01 (98.70 %) |
560 (1.30 %) |
1,496 (98.70 %) |
5,424,163 (51.37 %) |
894,914 (3.04 %) |
16,026,015 (36.93 %) |
72,765 (1.24 %) |
| 15 | crab-eating macaque CE1976F Keio U/RIKEN 2021 GCF_012559485.2 |
87,255 (3.15 %) |
20,054 (1.91 %) |
20,456 (1.23 %) |
n/a | 40.98 (99.99 %) |
605 (0.01 %) |
401 (100.00 %) |
5,272,147 (51.07 %) |
941,877 (2.83 %) |
15,772,147 (37.48 %) |
90,103 (1.40 %) |
| 16 | De Brazza's monkey GCA_004027615.1 |
n/a | 26,901 (1.31 %) |
46,619 (0.90 %) |
n/a | 41.18 (99.85 %) |
7,534 (0.02 %) |
2,126,734 (99.98 %) |
6,751,052 (54.69 %) |
1,804,857 (10.22 %) |
16,954,884 (44.26 %) |
104,630 (1.53 %) |
| 17 | drill GCF_000951045.1 |
42,567 (2.25 %) |
20,205 (1.90 %) |
18,407 (1.23 %) |
n/a | 40.73 (88.91 %) |
233,234 (11.12 %) |
246,054 (88.88 %) |
5,166,355 (49.05 %) |
834,739 (2.92 %) |
15,970,905 (31.27 %) |
42,242 (0.62 %) |
| 18 | Francois's langur GCF_009764315.1 |
80,215 (2.83 %) |
20,478 (1.87 %) |
20,685 (1.19 %) |
n/a | 41.12 (100.00 %) |
766 (0.00 %) |
1,016 (100.00 %) |
5,471,638 (52.57 %) |
928,320 (2.95 %) |
15,652,774 (38.76 %) |
129,321 (1.71 %) |
| 19 | gelada GCF_003255815.1 |
59,570 (2.42 %) |
20,532 (1.90 %) |
21,017 (1.20 %) |
n/a | 40.96 (98.37 %) |
27,860 (1.63 %) |
15,308 (100.00 %) |
5,467,919 (51.71 %) |
982,616 (2.99 %) |
15,865,443 (36.88 %) |
93,504 (1.36 %) |
| 20 | golden snub-nosed monkey (2019 Northwest U) GCF_007565055.1 |
64,150 (2.41 %) |
21,162 (1.81 %) |
20,993 (1.14 %) |
n/a | 40.90 (99.99 %) |
2,832 (0.01 %) |
3,257 (100.00 %) |
5,619,018 (53.60 %) |
1,226,902 (6.20 %) |
15,833,648 (40.58 %) |
99,771 (1.51 %) |
| 21 | gray mouse lemur GCF_000165445.2 |
74,341 (3.53 %) |
20,032 (1.90 %) |
22,619 (1.50 %) |
n/a | 40.98 (95.94 %) |
43,364 (4.06 %) |
50,983 (95.94 %) |
4,083,660 (41.60 %) |
582,431 (1.47 %) |
14,808,653 (30.05 %) |
74,772 (2.61 %) |
| 22 | green monkey 1994-021 (2014 refseq) GCF_000409795.2 |
76,050 (3.13 %) |
19,995 (1.95 %) |
50,732 (6.99 %) |
n/a | 40.81 (98.67 %) |
178,940 (1.35 %) |
163,018 (98.65 %) |
5,266,458 (49.55 %) |
980,479 (2.63 %) |
16,076,224 (35.62 %) |
50,033 (1.04 %) |
| 23 | green monkey WHO RCB 10-87 GCF_015252025.1 |
73,115 (2.94 %) |
20,320 (1.83 %) |
21,251 (1.19 %) |
n/a | 41.07 (99.75 %) |
8,419 (0.25 %) |
6,872 (100.00 %) |
5,517,731 (51.10 %) |
1,158,729 (3.95 %) |
16,622,084 (37.82 %) |
67,267 (1.70 %) |
| 24 | Hanuman langur GCA_004025065.1 |
n/a | 27,338 (1.54 %) |
46,486 (1.04 %) |
n/a | 41.28 (99.89 %) |
13,786 (0.05 %) |
1,077,535 (99.95 %) |
6,409,019 (52.08 %) |
1,008,391 (1.92 %) |
16,519,816 (39.37 %) |
95,794 (1.26 %) |
| 25 | human (HG00438.mat 2021) GCA_018471515.1 |
n/a | 20,788 (1.85 %) |
22,424 (1.25 %) |
233,427 (57.20 %) |
40.83 (100.00 %) |
n/a | 258 (100.00 %) |
5,426,471 (53.12 %) |
1,085,458 (7.66 %) |
16,023,596 (40.44 %) |
52,702 (1.17 %) |
| 26 | human (HG00438.pat 2021) GCA_018472595.1 |
n/a | 20,627 (1.85 %) |
22,176 (1.24 %) |
233,698 (4.96 %) |
40.82 (100.00 %) |
1 (0.00 %) |
276 (100.00 %) |
5,419,334 (52.97 %) |
1,071,302 (7.38 %) |
15,894,505 (40.10 %) |
52,377 (1.20 %) |
| 27 | human (HG00621.mat 2021) GCA_018472605.1 |
n/a | 20,611 (1.85 %) |
22,275 (1.25 %) |
233,258 (4.96 %) |
40.86 (100.00 %) |
n/a | 253 (100.00 %) |
5,392,161 (53.03 %) |
1,048,372 (7.50 %) |
15,960,374 (40.31 %) |
52,502 (1.20 %) |
| 28 | human (HG00621.pat 2021) GCA_018472575.1 |
n/a | 19,907 (1.86 %) |
21,558 (1.26 %) |
227,172 (5.00 %) |
40.88 (100.00 %) |
n/a | 287 (100.00 %) |
5,174,496 (52.83 %) |
1,030,071 (7.85 %) |
15,147,153 (40.18 %) |
50,988 (1.20 %) |
| 29 | human (HG00673.mat 2021) GCA_018472565.1 |
n/a | 20,805 (1.84 %) |
22,193 (1.24 %) |
233,975 (4.93 %) |
40.84 (100.00 %) |
n/a | 348 (100.00 %) |
5,408,639 (53.33 %) |
1,056,398 (8.05 %) |
16,117,475 (40.76 %) |
52,411 (1.14 %) |
| 30 | human (HG00673.pat 2021) GCA_018472585.1 |
n/a | 19,963 (1.85 %) |
21,514 (1.25 %) |
227,480 (4.97 %) |
40.84 (100.00 %) |
2 (0.00 %) |
420 (100.00 %) |
5,185,516 (53.08 %) |
1,065,657 (8.25 %) |
15,183,778 (40.61 %) |
50,883 (1.20 %) |
| 31 | human (HG00733.mat 2021) GCA_018506975.1 |
n/a | 20,626 (1.85 %) |
22,511 (1.25 %) |
233,295 (4.96 %) |
40.87 (100.00 %) |
1 (0.00 %) |
609 (100.00 %) |
5,412,701 (52.97 %) |
1,052,600 (7.34 %) |
15,895,725 (40.14 %) |
53,216 (1.22 %) |
| 32 | human (HG00733.pat 2021) GCA_018506955.1 |
n/a | 20,749 (1.85 %) |
22,251 (1.24 %) |
233,792 (4.94 %) |
40.83 (100.00 %) |
1 (0.00 %) |
695 (100.00 %) |
5,420,299 (53.15 %) |
1,076,604 (7.72 %) |
15,964,663 (40.46 %) |
53,315 (1.19 %) |
| 33 | human (HG00735.pat 2021) GCA_018472715.1 |
n/a | 20,688 (1.84 %) |
22,080 (1.23 %) |
233,237 (4.95 %) |
40.80 (100.00 %) |
1 (0.00 %) |
299 (100.00 %) |
5,391,900 (53.13 %) |
1,050,251 (7.66 %) |
16,052,188 (40.43 %) |
52,436 (1.14 %) |
| 34 | human (HG00735.mat 2021) GCA_018472765.1 |
n/a | 20,674 (1.84 %) |
22,283 (1.25 %) |
233,363 (4.94 %) |
40.80 (100.00 %) |
1 (0.00 %) |
244 (100.00 %) |
5,406,821 (53.15 %) |
1,060,553 (7.74 %) |
16,051,646 (40.51 %) |
52,343 (1.14 %) |
| 35 | human (HG00741.mat 2021) GCA_018471095.1 |
n/a | 20,654 (1.85 %) |
22,309 (1.25 %) |
233,294 (4.94 %) |
40.83 (100.00 %) |
n/a | 297 (100.00 %) |
5,410,814 (53.14 %) |
1,059,472 (7.72 %) |
16,043,406 (40.45 %) |
52,535 (1.14 %) |
| 36 | human (HG00741.pat 2021) GCA_018471105.1 |
n/a | 20,657 (1.85 %) |
22,458 (1.25 %) |
233,356 (4.95 %) |
40.86 (100.00 %) |
1 (0.00 %) |
289 (100.00 %) |
5,397,570 (53.08 %) |
1,046,743 (7.55 %) |
16,021,887 (40.41 %) |
52,164 (1.20 %) |
| 37 | human (HG01071.mat 2021) GCA_018472685.1 |
n/a | 20,742 (1.86 %) |
22,169 (1.25 %) |
233,386 (4.98 %) |
40.86 (100.00 %) |
n/a | 236 (100.00 %) |
5,380,815 (52.80 %) |
1,031,609 (7.04 %) |
16,008,178 (39.99 %) |
52,233 (1.13 %) |
| 38 | human (HG01071.pat 2021) GCA_018472725.1 |
n/a | 20,694 (1.84 %) |
22,451 (1.25 %) |
232,969 (4.90 %) |
40.75 (100.00 %) |
1 (0.00 %) |
330 (100.00 %) |
5,420,540 (53.42 %) |
1,100,044 (8.26 %) |
15,926,032 (40.73 %) |
52,706 (1.14 %) |
| 39 | human (HG01106.mat 2021) GCA_018471345.1 |
n/a | 20,635 (1.85 %) |
22,311 (1.24 %) |
233,162 (4.93 %) |
40.84 (100.00 %) |
1 (0.00 %) |
272 (100.00 %) |
5,394,949 (53.13 %) |
1,045,161 (7.68 %) |
15,896,292 (40.33 %) |
52,604 (1.18 %) |
| 40 | human (HG01106.pat 2021) GCA_018471075.1 |
n/a | 19,939 (1.84 %) |
21,482 (1.25 %) |
227,418 (4.97 %) |
40.82 (100.00 %) |
n/a | 284 (100.00 %) |
5,199,262 (53.10 %) |
1,073,766 (8.08 %) |
15,085,301 (40.44 %) |
51,050 (1.19 %) |
| 41 | human (HG01109.mat 2021) GCA_018504365.1 |
n/a | 20,638 (1.84 %) |
22,373 (1.25 %) |
233,201 (4.94 %) |
40.83 (100.00 %) |
1 (0.00 %) |
399 (100.00 %) |
5,405,239 (53.13 %) |
1,058,194 (7.69 %) |
15,910,496 (40.38 %) |
53,236 (1.22 %) |
| 42 | human (HG01109.pat 2021) GCA_018504645.1 |
n/a | 19,870 (1.85 %) |
21,659 (1.26 %) |
227,481 (4.98 %) |
40.81 (100.00 %) |
1 (0.00 %) |
473 (100.00 %) |
5,197,395 (52.95 %) |
1,071,566 (7.99 %) |
15,109,996 (40.28 %) |
51,315 (1.20 %) |
| 43 | human (HG01123.mat 2021) GCA_018469665.1 |
n/a | 20,643 (1.86 %) |
22,373 (1.25 %) |
233,154 (4.98 %) |
40.85 (100.00 %) |
1 (0.00 %) |
340 (100.00 %) |
5,382,379 (52.86 %) |
1,029,500 (7.16 %) |
15,979,100 (40.07 %) |
52,346 (1.15 %) |
| 44 | human (HG01123.pat 2021) GCA_018469695.1 |
n/a | 20,631 (1.86 %) |
22,210 (1.24 %) |
233,273 (4.97 %) |
40.86 (100.00 %) |
1 (0.00 %) |
436 (100.00 %) |
5,391,322 (52.85 %) |
1,041,900 (7.14 %) |
15,985,878 (40.09 %) |
52,630 (1.16 %) |
| 45 | human (HG01175.mat 2021) GCA_018471085.1 |
n/a | 20,587 (1.84 %) |
22,094 (1.24 %) |
232,602 (4.93 %) |
40.81 (100.00 %) |
3 (0.00 %) |
315 (100.00 %) |
5,397,845 (53.20 %) |
1,069,444 (7.79 %) |
15,978,901 (40.45 %) |
51,968 (1.14 %) |
| 46 | human (HG01175.pat 2021) GCA_018471065.1 |
n/a | 20,651 (1.85 %) |
22,302 (1.25 %) |
233,105 (4.94 %) |
40.83 (100.00 %) |
n/a | 365 (100.00 %) |
5,401,789 (53.10 %) |
1,061,956 (7.62 %) |
16,016,635 (40.44 %) |
52,440 (1.16 %) |
| 47 | human (HG01243.mat 2021) GCA_018504375.1 |
n/a | 20,701 (1.85 %) |
22,327 (1.24 %) |
232,970 (4.94 %) |
40.84 (100.00 %) |
n/a | 345 (100.00 %) |
5,384,218 (53.11 %) |
1,029,835 (7.61 %) |
15,997,541 (40.37 %) |
52,287 (1.16 %) |
| 48 | human (HG01243.pat 2021) GCA_018504045.1 |
n/a | 19,886 (1.86 %) |
21,597 (1.26 %) |
227,249 (5.00 %) |
40.90 (100.00 %) |
1 (0.00 %) |
436 (100.00 %) |
5,188,879 (52.80 %) |
1,041,178 (7.85 %) |
15,168,227 (40.25 %) |
51,387 (1.26 %) |
| 49 | human (HG01258.mat 2021) GCA_018469405.1 |
n/a | 20,652 (1.85 %) |
22,270 (1.25 %) |
233,297 (4.95 %) |
40.86 (100.00 %) |
1 (0.00 %) |
346 (100.00 %) |
5,421,505 (53.06 %) |
1,070,796 (7.57 %) |
15,904,078 (40.29 %) |
52,952 (1.24 %) |
| 50 | human (HG01258.pat 2021) GCA_018469675.1 |
n/a | 19,899 (1.85 %) |
21,663 (1.25 %) |
227,048 (4.98 %) |
40.83 (100.00 %) |
1 (0.00 %) |
324 (100.00 %) |
5,179,894 (52.93 %) |
1,053,273 (8.01 %) |
15,211,574 (40.34 %) |
50,868 (1.15 %) |
| 51 | human (HG01358.mat 2021) GCA_018469865.1 |
n/a | 20,620 (1.85 %) |
22,173 (1.24 %) |
232,988 (57.14 %) |
40.83 (100.00 %) |
1 (0.00 %) |
334 (100.00 %) |
5,408,314 (53.13 %) |
1,082,369 (7.68 %) |
15,986,592 (40.42 %) |
52,497 (1.15 %) |
| 52 | human (HG01358.pat 2021) GCA_018469965.1 |
n/a | 19,983 (1.85 %) |
21,787 (1.25 %) |
227,373 (4.96 %) |
40.85 (100.00 %) |
1 (0.00 %) |
441 (100.00 %) |
5,212,793 (53.10 %) |
1,073,348 (8.29 %) |
15,098,284 (40.47 %) |
51,706 (1.21 %) |
| 53 | human (HG01361.mat 2021) GCA_018469685.1 |
n/a | 20,709 (1.85 %) |
22,220 (1.24 %) |
233,019 (4.95 %) |
40.82 (100.00 %) |
n/a | 295 (100.00 %) |
5,400,880 (53.06 %) |
1,072,673 (7.57 %) |
15,970,600 (40.36 %) |
52,279 (1.19 %) |
| 54 | human (HG01361.pat 2021) GCA_018469705.1 |
n/a | 20,643 (1.86 %) |
22,265 (1.25 %) |
233,156 (4.98 %) |
40.88 (100.00 %) |
1 (0.00 %) |
288 (100.00 %) |
5,389,985 (52.82 %) |
1,039,540 (7.07 %) |
15,972,086 (40.01 %) |
52,246 (1.17 %) |
| 55 | human (HG01891.mat 2021) GCA_018467155.1 |
n/a | 20,644 (1.86 %) |
22,204 (1.24 %) |
233,342 (4.96 %) |
40.82 (100.00 %) |
1 (0.00 %) |
331 (100.00 %) |
5,394,888 (53.00 %) |
1,057,773 (7.41 %) |
16,010,248 (40.29 %) |
52,761 (1.18 %) |
| 56 | human (HG01891.pat 2021) GCA_018467165.1 |
n/a | 20,737 (1.84 %) |
22,422 (1.25 %) |
233,650 (4.94 %) |
40.86 (100.00 %) |
1 (0.00 %) |
427 (100.00 %) |
5,403,741 (53.18 %) |
1,044,828 (7.78 %) |
15,926,586 (40.45 %) |
52,966 (1.19 %) |
| 57 | human (HG01928.mat 2021) GCA_018472695.1 |
n/a | 20,608 (1.85 %) |
22,133 (1.24 %) |
232,837 (4.94 %) |
40.81 (100.00 %) |
n/a | 244 (100.00 %) |
5,393,247 (53.12 %) |
1,066,426 (7.67 %) |
15,949,983 (40.40 %) |
51,940 (1.16 %) |
| 58 | human (HG01928.pat 2021) GCA_018472705.1 |
n/a | 19,872 (1.85 %) |
21,396 (1.24 %) |
226,741 (4.96 %) |
40.86 (100.00 %) |
1 (0.00 %) |
317 (100.00 %) |
5,191,849 (53.05 %) |
1,052,422 (8.21 %) |
15,216,610 (40.53 %) |
50,940 (1.18 %) |
| 59 | human (HG01952.mat 2021) GCA_018471545.1 |
n/a | 20,679 (1.86 %) |
22,204 (1.25 %) |
233,578 (4.98 %) |
40.85 (100.00 %) |
n/a | 307 (100.00 %) |
5,393,904 (52.87 %) |
1,041,237 (7.18 %) |
15,894,360 (39.98 %) |
52,866 (1.21 %) |
| 60 | human (HG01952.pat 2021) GCA_018471555.1 |
n/a | 19,863 (1.85 %) |
21,383 (1.24 %) |
226,809 (4.97 %) |
40.86 (100.00 %) |
n/a | 378 (100.00 %) |
5,181,545 (52.95 %) |
1,053,224 (8.07 %) |
15,149,369 (40.47 %) |
51,292 (1.24 %) |
| 61 | human (HG01978.mat 2021) GCA_018472865.1 |
n/a | 20,711 (1.84 %) |
22,195 (1.24 %) |
233,223 (4.92 %) |
40.84 (100.00 %) |
n/a | 247 (100.00 %) |
5,415,439 (53.41 %) |
1,076,389 (8.28 %) |
16,001,461 (40.83 %) |
52,688 (1.16 %) |
| 62 | human (HG01978.pat 2021) GCA_018472845.1 |
n/a | 20,727 (1.84 %) |
22,443 (1.25 %) |
233,592 (4.92 %) |
40.83 (100.00 %) |
1 (0.00 %) |
286 (100.00 %) |
5,424,250 (53.38 %) |
1,090,520 (8.17 %) |
15,938,736 (40.68 %) |
52,674 (1.19 %) |
| 63 | human (HG02055.mat 2021) GCA_018506125.1 |
n/a | 20,668 (1.86 %) |
22,497 (1.26 %) |
233,148 (4.96 %) |
40.83 (100.00 %) |
1 (0.00 %) |
306 (100.00 %) |
5,394,664 (52.96 %) |
1,054,907 (7.31 %) |
16,015,246 (40.18 %) |
52,182 (1.14 %) |
| 64 | human (HG02055.pat 2021) GCA_018505855.1 |
n/a | 19,927 (1.83 %) |
21,549 (1.23 %) |
227,271 (4.93 %) |
40.82 (100.00 %) |
n/a | 367 (100.00 %) |
5,216,705 (53.37 %) |
1,083,360 (8.82 %) |
15,156,062 (40.89 %) |
51,291 (1.20 %) |
| 65 | human (HG02080.mat 2021) GCA_018504085.1 |
n/a | 20,633 (1.85 %) |
22,288 (1.24 %) |
233,237 (4.94 %) |
40.84 (100.00 %) |
1 (0.00 %) |
422 (100.00 %) |
5,403,587 (53.12 %) |
1,056,798 (7.68 %) |
15,880,598 (40.28 %) |
52,572 (1.21 %) |
| 66 | human (HG02080.pat 2021) GCA_018504055.1 |
n/a | 20,645 (1.85 %) |
22,426 (1.26 %) |
233,357 (4.96 %) |
40.84 (100.00 %) |
n/a | 485 (100.00 %) |
5,400,305 (52.99 %) |
1,056,100 (7.39 %) |
15,866,266 (40.12 %) |
52,798 (1.20 %) |
| 67 | human (HG02109.mat 2021) GCA_018505825.1 |
n/a | 20,672 (1.85 %) |
22,359 (1.25 %) |
233,217 (4.95 %) |
40.86 (100.00 %) |
n/a | 445 (100.00 %) |
5,404,232 (52.99 %) |
1,059,138 (7.38 %) |
15,909,866 (40.16 %) |
52,821 (1.21 %) |
| 68 | human (HG02109.pat 2021) GCA_018505865.1 |
n/a | 20,726 (1.85 %) |
22,416 (1.25 %) |
233,280 (4.94 %) |
40.84 (100.00 %) |
2 (0.00 %) |
481 (100.00 %) |
5,415,046 (53.08 %) |
1,053,373 (7.55 %) |
15,926,813 (40.27 %) |
52,917 (1.18 %) |
| 69 | human (HG02145.mat 2021) GCA_018852585.1 |
n/a | 20,626 (1.85 %) |
22,340 (1.25 %) |
233,065 (4.94 %) |
40.85 (100.00 %) |
1 (0.00 %) |
437 (100.00 %) |
5,406,959 (53.08 %) |
1,055,638 (7.58 %) |
15,881,847 (40.24 %) |
52,888 (1.19 %) |
| 70 | human (HG02145.pat 2021) GCA_018852595.1 |
n/a | 19,971 (1.84 %) |
23,489 (1.40 %) |
227,332 (4.94 %) |
40.91 (100.00 %) |
1 (0.00 %) |
817 (100.00 %) |
5,210,152 (53.01 %) |
1,080,455 (8.52 %) |
14,936,162 (40.43 %) |
52,745 (1.32 %) |
| 71 | human (HG02148.pat 2021) GCA_018471525.1 |
n/a | 20,675 (1.85 %) |
22,449 (1.25 %) |
233,621 (4.96 %) |
40.87 (100.00 %) |
n/a | 487 (100.00 %) |
5,408,728 (53.04 %) |
1,060,811 (7.55 %) |
15,818,402 (40.19 %) |
52,717 (1.23 %) |
| 72 | human (HG02148.mat 2021) GCA_018471535.1 |
n/a | 20,622 (1.85 %) |
22,230 (1.24 %) |
233,267 (4.94 %) |
40.81 (100.00 %) |
n/a | 423 (100.00 %) |
5,415,368 (53.22 %) |
1,083,752 (7.85 %) |
16,009,690 (40.54 %) |
52,324 (1.14 %) |
| 73 | human (HG02257.mat 2021) GCA_018466845.1 |
n/a | 20,636 (1.85 %) |
22,298 (1.24 %) |
233,236 (4.95 %) |
40.84 (100.00 %) |
1 (0.00 %) |
292 (100.00 %) |
5,409,203 (53.10 %) |
1,060,311 (7.60 %) |
16,026,213 (40.43 %) |
52,647 (1.16 %) |
| 74 | human (HG02257.pat 2021) GCA_018466835.1 |
n/a | 20,659 (1.84 %) |
22,252 (1.23 %) |
233,332 (4.93 %) |
40.78 (100.00 %) |
n/a | 306 (100.00 %) |
5,414,841 (53.29 %) |
1,077,125 (7.99 %) |
15,891,119 (40.53 %) |
52,638 (1.18 %) |
| 75 | human (HG02486.mat 2021) GCA_018467015.1 |
n/a | 20,626 (1.85 %) |
22,072 (1.24 %) |
232,923 (4.95 %) |
40.80 (100.00 %) |
1 (0.00 %) |
283 (100.00 %) |
5,409,820 (53.15 %) |
1,075,146 (7.68 %) |
15,995,649 (40.44 %) |
52,593 (1.16 %) |
| 76 | human (HG02486.pat 2021) GCA_018467005.1 |
n/a | 20,047 (1.86 %) |
21,511 (1.24 %) |
227,472 (4.97 %) |
40.80 (100.00 %) |
1 (0.00 %) |
342 (100.00 %) |
5,191,769 (53.10 %) |
1,044,947 (8.26 %) |
15,239,696 (40.62 %) |
51,172 (1.16 %) |
| 77 | human (HG02559.mat 2021) GCA_018466985.1 |
n/a | 20,748 (1.85 %) |
22,425 (1.25 %) |
233,661 (4.95 %) |
40.84 (100.00 %) |
n/a | 329 (100.00 %) |
5,409,998 (53.11 %) |
1,067,279 (7.64 %) |
15,944,107 (40.38 %) |
53,297 (1.22 %) |
| 78 | human (HG02559.pat 2021) GCA_018466855.1 |
n/a | 20,684 (1.85 %) |
22,457 (1.26 %) |
233,500 (4.96 %) |
40.86 (100.00 %) |
1 (0.00 %) |
260 (100.00 %) |
5,394,499 (53.00 %) |
1,048,556 (7.39 %) |
16,015,449 (40.28 %) |
52,834 (1.17 %) |
| 79 | human (HG02572.mat 2021) GCA_018470445.1 |
n/a | 20,823 (1.84 %) |
22,634 (1.24 %) |
232,547 (4.89 %) |
40.83 (100.00 %) |
1 (0.00 %) |
632 (100.00 %) |
5,435,641 (53.28 %) |
1,076,981 (7.96 %) |
15,851,923 (40.45 %) |
53,410 (1.21 %) |
| 80 | human (HG02572.pat 2021) GCA_018470435.1 |
n/a | 20,054 (1.85 %) |
21,827 (1.25 %) |
225,951 (4.91 %) |
40.85 (100.00 %) |
1 (0.00 %) |
641 (100.00 %) |
5,213,929 (53.30 %) |
1,082,137 (8.76 %) |
15,068,577 (40.69 %) |
51,312 (1.19 %) |
| 81 | human (HG02622.mat 2021) GCA_018469875.1 |
n/a | 20,669 (1.84 %) |
22,455 (1.24 %) |
233,354 (4.93 %) |
40.86 (100.00 %) |
n/a | 292 (100.00 %) |
5,446,540 (53.17 %) |
1,085,576 (7.76 %) |
15,975,207 (40.52 %) |
53,535 (1.26 %) |
| 82 | human (HG02622.pat 2021) GCA_018469925.1 |
n/a | 20,698 (1.84 %) |
22,536 (1.25 %) |
233,733 (4.94 %) |
40.84 (100.00 %) |
1 (0.00 %) |
270 (100.00 %) |
5,421,378 (53.22 %) |
1,062,842 (7.81 %) |
15,934,809 (40.46 %) |
52,975 (1.21 %) |
| 83 | human (HG02630.pat 2021) GCA_018469945.1 |
n/a | 20,722 (1.83 %) |
22,445 (1.24 %) |
233,268 (4.91 %) |
40.85 (100.00 %) |
1 (0.00 %) |
534 (100.00 %) |
5,449,816 (53.34 %) |
1,108,461 (8.05 %) |
15,985,498 (40.79 %) |
53,746 (1.28 %) |
| 84 | human (HG02630.mat 2021) GCA_018469955.1 |
n/a | 20,674 (1.84 %) |
22,467 (1.25 %) |
233,172 (4.93 %) |
40.87 (100.00 %) |
1 (0.00 %) |
497 (100.00 %) |
5,432,857 (53.10 %) |
1,072,648 (7.64 %) |
15,990,876 (40.53 %) |
54,101 (1.32 %) |
| 85 | human (HG02717.mat 2021) GCA_018469935.1 |
n/a | 20,621 (1.84 %) |
22,396 (1.25 %) |
233,096 (4.93 %) |
40.81 (100.00 %) |
1 (0.00 %) |
323 (100.00 %) |
5,411,829 (53.22 %) |
1,079,483 (7.87 %) |
15,854,981 (40.43 %) |
53,155 (1.21 %) |
| 86 | human (HG02717.pat 2021) GCA_018470425.1 |
n/a | 19,952 (1.84 %) |
21,767 (1.25 %) |
227,273 (4.93 %) |
40.83 (100.00 %) |
1 (0.00 %) |
399 (100.00 %) |
5,216,997 (53.34 %) |
1,089,537 (8.70 %) |
15,132,132 (40.83 %) |
51,815 (1.21 %) |
| 87 | human (HG02723.mat 2021) GCA_018504065.1 |
n/a | 20,697 (1.85 %) |
22,322 (1.25 %) |
233,152 (4.95 %) |
40.83 (100.00 %) |
2 (0.00 %) |
429 (100.00 %) |
5,403,282 (53.05 %) |
1,062,881 (7.52 %) |
15,861,495 (40.19 %) |
52,733 (1.19 %) |
| 88 | human (HG02723.pat 2021) GCA_018504075.1 |
n/a | 20,606 (1.84 %) |
22,627 (1.25 %) |
233,499 (4.92 %) |
40.82 (100.00 %) |
2 (0.00 %) |
529 (100.00 %) |
5,419,888 (53.29 %) |
1,079,052 (8.00 %) |
15,778,626 (40.44 %) |
53,133 (1.23 %) |
| 89 | human (HG02818.mat 2021) GCA_018503585.1 |
n/a | 20,695 (1.85 %) |
22,489 (1.25 %) |
233,161 (4.93 %) |
40.80 (100.00 %) |
1 (0.00 %) |
620 (100.00 %) |
5,406,404 (53.21 %) |
1,061,348 (7.77 %) |
15,879,759 (40.38 %) |
52,992 (1.18 %) |
| 90 | human (HG02818.pat 2021) GCA_018503575.1 |
n/a | 20,696 (1.86 %) |
22,490 (1.27 %) |
233,253 (4.97 %) |
40.87 (100.00 %) |
1 (0.00 %) |
566 (100.00 %) |
5,397,389 (52.88 %) |
1,044,887 (7.21 %) |
16,011,018 (40.13 %) |
52,793 (1.17 %) |
| 91 | human (HG02886.mat 2021) GCA_018470455.1 |
n/a | 20,740 (1.84 %) |
22,693 (1.25 %) |
233,895 (4.94 %) |
40.87 (100.00 %) |
n/a | 461 (100.00 %) |
5,448,421 (53.12 %) |
1,077,973 (7.55 %) |
15,956,661 (40.38 %) |
53,701 (1.29 %) |
| 92 | human (HG02886.pat 2021) GCA_018470465.1 |
n/a | 20,705 (1.84 %) |
22,599 (1.26 %) |
233,328 (4.93 %) |
40.85 (100.00 %) |
n/a | 503 (100.00 %) |
5,438,367 (53.15 %) |
1,090,141 (7.70 %) |
16,016,158 (40.57 %) |
53,652 (1.26 %) |
| 93 | human (HG03098.pat 2021) GCA_018506155.1 |
n/a | 19,900 (1.84 %) |
21,567 (1.24 %) |
226,998 (4.94 %) |
40.84 (100.00 %) |
1 (0.00 %) |
445 (100.00 %) |
5,201,143 (53.24 %) |
1,083,861 (8.56 %) |
15,069,721 (40.64 %) |
51,389 (1.21 %) |
| 94 | human (HG03098.mat 2021) GCA_018506165.1 |
n/a | 20,700 (1.83 %) |
22,200 (1.24 %) |
233,714 (4.91 %) |
40.79 (100.00 %) |
n/a | 331 (100.00 %) |
5,414,502 (53.46 %) |
1,066,527 (8.36 %) |
15,926,377 (40.78 %) |
52,417 (1.18 %) |
| 95 | human (HG03453.mat 2021) GCA_018472855.1 |
n/a | 20,710 (1.84 %) |
22,595 (1.25 %) |
233,614 (4.93 %) |
40.83 (100.00 %) |
1 (0.00 %) |
439 (100.00 %) |
5,436,784 (53.21 %) |
1,094,451 (7.82 %) |
15,990,282 (40.60 %) |
53,318 (1.27 %) |
| 96 | human (HG03453.pat 2021) GCA_018473305.1 |
n/a | 20,661 (1.84 %) |
22,407 (1.25 %) |
233,945 (4.93 %) |
40.80 (100.00 %) |
n/a | 480 (100.00 %) |
5,418,964 (53.30 %) |
1,060,724 (7.98 %) |
15,795,098 (40.40 %) |
53,149 (1.21 %) |
| 97 | human (HG03486.mat 2021) GCA_018503525.1 |
n/a | 20,760 (1.85 %) |
22,730 (1.26 %) |
233,655 (4.96 %) |
40.87 (100.00 %) |
2 (0.00 %) |
480 (100.00 %) |
5,422,116 (53.02 %) |
1,069,864 (7.46 %) |
15,951,020 (40.27 %) |
53,338 (1.19 %) |
| 98 | human (HG03486.pat 2021) GCA_018503245.1 |
n/a | 20,698 (1.84 %) |
22,539 (1.24 %) |
233,646 (4.92 %) |
40.84 (100.00 %) |
2 (0.00 %) |
519 (100.00 %) |
5,426,413 (53.27 %) |
1,068,800 (7.93 %) |
15,812,092 (40.41 %) |
53,143 (1.26 %) |
| 99 | human (HG03492.mat 2021) GCA_018505845.1 |
n/a | 20,677 (1.85 %) |
22,401 (1.25 %) |
233,402 (4.96 %) |
40.85 (100.00 %) |
1 (0.00 %) |
495 (100.00 %) |
5,393,586 (52.97 %) |
1,050,402 (7.38 %) |
15,875,935 (40.07 %) |
52,994 (1.18 %) |
| 100 | human (HG03492.pat 2021) GCA_018505835.1 |
n/a | 19,970 (1.85 %) |
21,672 (1.25 %) |
227,277 (4.97 %) |
40.84 (100.00 %) |
n/a | 618 (100.00 %) |
5,202,430 (53.00 %) |
1,069,560 (8.18 %) |
15,071,476 (40.33 %) |
51,291 (1.19 %) |
| 101 | human (HG03516.mat 2021) GCA_018469425.1 |
n/a | 20,766 (1.85 %) |
22,424 (1.25 %) |
233,619 (4.96 %) |
40.85 (100.00 %) |
n/a | 320 (100.00 %) |
5,437,541 (52.96 %) |
1,084,729 (7.35 %) |
16,097,675 (40.30 %) |
52,953 (1.18 %) |
| 102 | human (HG03516.pat 2021) GCA_018469415.1 |
n/a | 20,820 (1.84 %) |
22,672 (1.25 %) |
234,068 (4.91 %) |
40.85 (100.00 %) |
1 (0.00 %) |
369 (100.00 %) |
5,451,270 (53.44 %) |
1,086,645 (8.28 %) |
15,991,774 (40.84 %) |
53,435 (1.18 %) |
| 103 | human (HG03540.mat 2021) GCA_018473295.1 |
n/a | 20,665 (1.84 %) |
22,566 (1.26 %) |
233,386 (4.92 %) |
40.85 (100.00 %) |
1 (0.00 %) |
435 (100.00 %) |
5,436,802 (53.34 %) |
1,105,174 (8.06 %) |
15,931,296 (40.72 %) |
53,436 (1.26 %) |
| 104 | human (HG03540.pat 2021) GCA_018473315.1 |
n/a | 20,724 (1.83 %) |
22,627 (1.25 %) |
233,360 (4.91 %) |
40.83 (100.00 %) |
1 (0.00 %) |
512 (100.00 %) |
5,449,110 (53.39 %) |
1,087,677 (8.16 %) |
15,936,844 (40.79 %) |
53,859 (1.30 %) |
| 105 | human (HG03579.mat 2021) GCA_018472825.1 |
n/a | 20,702 (1.85 %) |
22,327 (1.25 %) |
233,403 (4.95 %) |
40.84 (100.00 %) |
1 (0.00 %) |
456 (100.00 %) |
5,423,189 (53.07 %) |
1,075,620 (7.56 %) |
15,928,710 (40.31 %) |
53,423 (1.24 %) |
| 106 | human (HG03579.pat 2021) GCA_018472835.1 |
n/a | 19,942 (1.84 %) |
21,710 (1.25 %) |
227,313 (4.94 %) |
40.82 (100.00 %) |
n/a | 499 (100.00 %) |
5,226,752 (53.28 %) |
1,092,235 (8.58 %) |
15,143,136 (40.79 %) |
51,622 (1.24 %) |
| 107 | human (NA24385.mat 2022) GCA_021951015.1 |
n/a | 20,809 (1.82 %) |
21,369 (1.18 %) |
234,089 (4.92 %) |
40.85 (99.95 %) |
109 (0.05 %) |
355 (100.00 %) |
5,489,855 (53.93 %) |
1,085,681 (8.26 %) |
15,968,830 (40.95 %) |
53,511 (1.32 %) |
| 108 | human (NA24385.pat 2022) GCA_021950905.1 |
n/a | 20,014 (1.81 %) |
20,716 (1.19 %) |
227,278 (4.91 %) |
40.87 (99.97 %) |
117 (0.03 %) |
514 (100.00 %) |
5,293,356 (54.01 %) |
1,100,786 (9.09 %) |
15,122,569 (41.27 %) |
52,546 (1.35 %) |
| 109 | human (NA24385.mat 2021) GCA_018852615.1 |
n/a | 20,744 (1.84 %) |
21,968 (1.22 %) |
233,779 (4.92 %) |
40.85 (100.00 %) |
6 (0.00 %) |
445 (100.00 %) |
5,435,410 (53.40 %) |
1,086,871 (8.27 %) |
15,970,867 (40.97 %) |
53,581 (1.32 %) |
| 110 | human (NA24385.pat 2021) GCA_018852605.1 |
n/a | 19,919 (1.83 %) |
21,582 (1.22 %) |
227,333 (4.91 %) |
40.87 (100.00 %) |
5 (0.00 %) |
610 (100.00 %) |
5,215,774 (53.54 %) |
1,094,036 (9.09 %) |
15,125,069 (41.29 %) |
52,653 (1.34 %) |
| 111 | human (NA24631.mat 2021) GCA_018506965.1 |
n/a | 20,683 (1.85 %) |
22,446 (1.25 %) |
233,691 (4.96 %) |
40.88 (100.00 %) |
4 (0.00 %) |
503 (100.00 %) |
5,423,411 (52.98 %) |
1,075,094 (7.46 %) |
15,897,770 (40.32 %) |
53,731 (1.31 %) |
| 112 | human (NA24631.pat 2021) GCA_018506945.1 |
n/a | 19,910 (1.84 %) |
21,610 (1.24 %) |
227,521 (4.95 %) |
40.90 (100.00 %) |
2 (0.00 %) |
682 (100.00 %) |
5,224,127 (53.12 %) |
1,078,588 (8.33 %) |
15,264,128 (40.95 %) |
53,164 (1.35 %) |
| 113 | human (NA18906.mat 2021) GCA_018503255.1 |
n/a | 20,739 (1.84 %) |
22,340 (1.25 %) |
233,812 (4.92 %) |
40.86 (100.00 %) |
n/a | 271 (100.00 %) |
5,464,910 (53.26 %) |
1,101,031 (7.88 %) |
15,871,098 (40.43 %) |
53,290 (1.27 %) |
| 114 | human (NA18906.pat 2021) GCA_018503285.1 |
n/a | 20,765 (1.85 %) |
22,414 (1.25 %) |
234,102 (4.95 %) |
40.84 (100.00 %) |
n/a | 304 (100.00 %) |
5,443,478 (53.06 %) |
1,085,707 (7.53 %) |
15,888,465 (40.19 %) |
53,328 (1.24 %) |
| 115 | human (NA19240.mat 2021) GCA_018503275.1 |
n/a | 20,678 (1.85 %) |
22,534 (1.26 %) |
233,508 (4.96 %) |
40.82 (100.00 %) |
1 (0.00 %) |
387 (100.00 %) |
5,404,648 (52.98 %) |
1,047,126 (7.31 %) |
15,970,133 (40.15 %) |
52,529 (1.17 %) |
| 116 | human (NA19240.pat 2021) GCA_018503265.1 |
n/a | 20,772 (1.85 %) |
22,461 (1.25 %) |
233,684 (4.95 %) |
40.86 (100.00 %) |
4 (0.00 %) |
453 (100.00 %) |
5,424,224 (53.08 %) |
1,063,925 (7.53 %) |
15,954,132 (40.32 %) |
53,106 (1.23 %) |
| 117 | human (NA20129.mat 2021) GCA_018504635.1 |
n/a | 20,664 (1.84 %) |
22,511 (1.24 %) |
233,033 (4.92 %) |
40.85 (100.00 %) |
1 (0.00 %) |
448 (100.00 %) |
5,420,332 (53.24 %) |
1,067,867 (7.86 %) |
15,932,491 (40.50 %) |
53,011 (1.20 %) |
| 118 | human (NA20129.pat 2021) GCA_018504625.1 |
n/a | 20,706 (1.85 %) |
22,365 (1.26 %) |
233,543 (4.96 %) |
40.84 (100.00 %) |
n/a | 481 (100.00 %) |
5,401,495 (53.02 %) |
1,051,311 (7.46 %) |
16,041,778 (40.34 %) |
52,911 (1.18 %) |
| 119 | human (NA21309.mat 2021) GCA_018504655.1 |
n/a | 20,635 (1.84 %) |
22,458 (1.25 %) |
233,555 (4.94 %) |
40.84 (100.00 %) |
1 (0.00 %) |
508 (100.00 %) |
5,389,804 (53.21 %) |
1,045,498 (7.82 %) |
15,862,735 (40.38 %) |
52,479 (1.17 %) |
| 120 | human (NA21309.pat 2021) GCA_018504665.1 |
n/a | 20,685 (1.85 %) |
22,478 (1.25 %) |
233,394 (4.95 %) |
40.81 (100.00 %) |
4 (0.00 %) |
608 (100.00 %) |
5,399,150 (53.06 %) |
1,053,638 (7.58 %) |
15,999,929 (40.35 %) |
52,798 (1.17 %) |
| 121 | human (WGS:JACSEW01 2021 alternate hap) GCA_016700455.2 |
n/a | 19,667 (1.95 %) |
20,065 (1.23 %) |
n/a | 40.96 (99.60 %) |
1,172 (0.40 %) |
994 (100.00 %) |
5,086,372 (51.37 %) |
932,450 (3.67 %) |
15,152,141 (37.48 %) |
49,325 (1.10 %) |
| 122 | human (mHomSap3 WGS:JACSEX01 2021) GCA_016695395.2 |
n/a | 20,401 (1.92 %) |
20,682 (1.21 %) |
n/a | 40.87 (99.64 %) |
1,217 (0.36 %) |
950 (100.00 %) |
5,350,025 (52.32 %) |
1,006,502 (4.68 %) |
15,969,368 (38.50 %) |
50,826 (1.08 %) |
| 123 | lesser dwarf lemur GCA_004024725.1 |
n/a | 22,605 (1.80 %) |
35,000 (1.46 %) |
93,377 (1.59 %) |
40.49 (99.93 %) |
7,529 (0.03 %) |
555,280 (99.97 %) |
3,959,297 (40.17 %) |
448,919 (1.48 %) |
14,173,023 (34.36 %) |
59,165 (1.83 %) |
| 124 | Ma's night monkey GCF_000952055.2 |
55,061 (2.59 %) |
21,075 (1.93 %) |
22,284 (1.31 %) |
n/a | 40.74 (94.86 %) |
83,930 (5.15 %) |
112,851 (94.85 %) |
5,110,193 (47.72 %) |
734,754 (2.02 %) |
15,854,219 (33.62 %) |
36,070 (0.90 %) |
| 125 | mantled howler monkey GCA_004027835.1 |
n/a | 26,541 (1.65 %) |
40,210 (1.16 %) |
41,017 (1.17 %) |
40.83 (99.88 %) |
16,130 (0.05 %) |
1,152,695 (99.95 %) |
6,216,031 (48.47 %) |
1,428,462 (4.68 %) |
16,106,098 (41.41 %) |
41,196 (0.86 %) |
| 126 | northern white-cheeked gibbon (2019 U. Washington) GCF_006542625.1 |
60,700 (2.64 %) |
20,360 (1.92 %) |
21,533 (1.26 %) |
n/a | 41.03 (99.47 %) |
510 (0.53 %) |
2,762 (99.47 %) |
5,237,782 (51.76 %) |
902,578 (4.06 %) |
15,431,824 (38.31 %) |
71,450 (1.25 %) |
| 127 | olive baboon (2019 UCSF) GCF_008728515.1 |
93,385 (3.84 %) |
20,382 (1.88 %) |
21,115 (1.19 %) |
n/a | 40.89 (99.92 %) |
4,098 (0.08 %) |
11,145 (100.00 %) |
5,514,823 (51.36 %) |
937,126 (2.31 %) |
16,410,891 (37.14 %) |
77,919 (1.22 %) |
| 128 | Panamanian white-faced capuchin GCF_001604975.1 |
68,109 (2.82 %) |
21,215 (2.01 %) |
21,494 (1.35 %) |
48,384 (2.19 %) |
40.71 (96.08 %) |
152,704 (3.94 %) |
140,597 (96.06 %) |
4,992,577 (47.59 %) |
760,554 (1.72 %) |
15,071,867 (33.72 %) |
30,688 (0.83 %) |
| 129 | Pere David's macaque GCF_024542745.1 |
74,798 (3.50 %) |
20,233 (1.92 %) |
20,671 (1.23 %) |
n/a | 41.00 (99.99 %) |
367 (0.01 %) |
623 (100.00 %) |
5,363,770 (51.19 %) |
1,033,990 (2.95 %) |
15,744,042 (37.44 %) |
90,119 (1.42 %) |
| 130 | Philippine tarsier GCF_000164805.1 |
35,786 (1.36 %) |
21,606 (1.23 %) |
25,636 (1.04 %) |
n/a | 40.96 (98.61 %) |
155,714 (1.39 %) |
492,903 (98.61 %) |
6,462,952 (48.20 %) |
1,062,043 (2.47 %) |
18,768,491 (40.02 %) |
78,629 (1.04 %) |
| 131 | pig-tailed macaque GCF_000956065.1 |
90,971 (3.40 %) |
20,184 (1.89 %) |
21,096 (1.24 %) |
n/a | 40.98 (96.27 %) |
84,363 (3.74 %) |
94,057 (96.26 %) |
5,479,257 (50.37 %) |
936,458 (2.35 %) |
16,932,843 (34.70 %) |
82,528 (1.29 %) |
| 132 | proboscis monkey GCA_004027105.1 |
n/a | 26,778 (1.60 %) |
43,314 (1.07 %) |
n/a | 41.01 (99.89 %) |
18,289 (0.06 %) |
942,104 (99.94 %) |
6,402,701 (53.25 %) |
1,093,958 (2.69 %) |
16,752,195 (39.70 %) |
90,071 (1.21 %) |
| 133 | pygmy chimpanzee (Ulindi refseq 2015) GCF_000258655.2 |
59,345 (2.62 %) |
19,943 (1.95 %) |
18,807 (1.18 %) |
n/a | 40.74 (82.95 %) |
156,797 (17.06 %) |
121,337 (82.94 %) |
5,134,959 (50.88 %) |
775,493 (1.63 %) |
15,570,598 (30.28 %) |
43,049 (0.71 %) |
| 134 | pygmy chimpanzee (Mhudiblu Carbone 601152 2020) GCF_013052645.1 |
85,047 (3.05 %) |
n/a | 21,403 (1.16 %) |
n/a | 40.57 (98.80 %) |
683 (1.20 %) |
4,976 (98.80 %) |
4,937,695 (46.41 %) |
960,717 (8.41 %) |
15,846,875 (40.31 %) |
45,540 (0.95 %) |
| 135 | pygmy chimpanzee (NHGRI 2023) GCF_029289425.1 |
84,858 (3.73 %) |
20,765 (1.73 %) |
22,666 (1.18 %) |
n/a | 40.49 (99.96 %) |
8 (0.04 %) |
443 (100.00 %) |
n/a | 1,054,555 (12.79 %) |
15,952,698 (43.80 %) |
53,329 (1.37 %) |
| 136 | red guenon GCA_004027335.1 |
n/a | 26,554 (1.40 %) |
43,056 (0.94 %) |
n/a | 41.19 (99.83 %) |
13,075 (0.04 %) |
2,577,035 (99.96 %) |
7,718,970 (56.55 %) |
2,223,871 (8.85 %) |
18,186,363 (47.01 %) |
109,358 (1.37 %) |
| 137 | red shanked douc langur GCA_004024825.1 |
n/a | 25,296 (1.59 %) |
37,062 (1.07 %) |
n/a | 41.05 (99.87 %) |
14,638 (0.05 %) |
1,445,731 (99.95 %) |
6,884,034 (54.54 %) |
1,201,033 (2.95 %) |
16,938,986 (42.00 %) |
84,642 (1.12 %) |
| 138 | Rhesus monkey (2019 U. Washington) GCF_003339765.1 |
86,719 (3.15 %) |
20,455 (1.85 %) |
21,565 (1.21 %) |
n/a | 41.00 (98.84 %) |
248 (1.16 %) |
3,268 (98.84 %) |
5,469,991 (52.68 %) |
993,786 (5.32 %) |
16,005,457 (38.50 %) |
86,250 (1.31 %) |
| 139 | ring-tailed lemur (2021) GCF_020740605.2 |
55,883 (2.78 %) |
18,659 (1.98 %) |
20,542 (1.50 %) |
n/a | 41.36 (99.84 %) |
210 (0.16 %) |
185 (100.00 %) |
3,432,734 (37.67 %) |
518,071 (6.84 %) |
12,916,577 (32.91 %) |
50,626 (1.88 %) |
| 140 | siamang (Jambi primary hap 2023) GCF_028878055.1 |
79,118 (2.62 %) |
20,139 (1.70 %) |
21,232 (1.14 %) |
n/a | 40.62 (100.00 %) |
1 (0.00 %) |
606 (100.00 %) |
5,278,880 (55.89 %) |
946,219 (14.68 %) |
14,395,605 (46.26 %) |
95,573 (1.75 %) |
| 141 | Sclater's lemur (Harlow 2015) GCA_001262665.1 |
n/a | 19,832 (2.09 %) |
23,882 (1.58 %) |
n/a | 40.77 (99.01 %) |
254,375 (1.01 %) |
292,741 (98.99 %) |
3,621,134 (39.99 %) |
434,393 (1.73 %) |
13,470,199 (29.03 %) |
47,664 (1.66 %) |
| 142 | silvery gibbon (HMO894 2020 UC Santa Cruz) GCF_009828535.2 |
63,475 (2.65 %) |
20,581 (1.94 %) |
21,181 (1.20 %) |
41,252 (1.46 %) |
41.02 (97.81 %) |
25,106 (2.19 %) |
18,395 (100.00 %) |
5,332,131 (51.09 %) |
857,562 (2.26 %) |
15,565,289 (36.84 %) |
80,124 (1.26 %) |
| 143 | slow loris (mNycCou1 primary hap 2022) GCF_027406575.1 |
67,211 (2.59 %) |
22,193 (1.49 %) |
21,345 (1.28 %) |
n/a | 40.82 (99.86 %) |
218 (0.14 %) |
84 (100.00 %) |
4,625,872 (39.88 %) |
579,983 (1.59 %) |
14,405,367 (40.78 %) |
38,257 (0.77 %) |
| 144 | small-eared galago GCF_000181295.1 |
38,532 (2.11 %) |
20,477 (1.82 %) |
19,107 (1.43 %) |
n/a | 41.11 (93.67 %) |
192,447 (6.36 %) |
200,099 (93.64 %) |
4,369,204 (39.41 %) |
454,913 (1.11 %) |
13,579,820 (30.37 %) |
21,834 (0.62 %) |
| 145 | sooty mangabey GCF_000955945.1 |
76,860 (3.18 %) |
20,065 (1.92 %) |
21,156 (1.27 %) |
n/a | 40.92 (97.87 %) |
65,329 (2.14 %) |
76,752 (97.86 %) |
5,287,418 (49.49 %) |
908,575 (2.58 %) |
16,543,149 (35.26 %) |
70,987 (1.22 %) |
| 146 | Sumatran orangutan (AG06213 primary hap 2023) GCF_028885655.1 |
98,046 (3.46 %) |
21,162 (1.68 %) |
21,714 (1.13 %) |
n/a | 41.13 (99.79 %) |
59 (0.21 %) |
2,670 (99.79 %) |
5,730,768 (55.05 %) |
1,175,314 (11.19 %) |
16,323,507 (44.05 %) |
55,799 (2.08 %) |
| 147 | Sumatran orangutan (Susie 2018 refseq) GCF_002880775.1 |
58,185 (2.32 %) |
20,151 (1.79 %) |
21,000 (1.15 %) |
n/a | 40.80 (99.29 %) |
553 (0.70 %) |
5,814 (99.30 %) |
5,483,266 (54.37 %) |
1,048,361 (8.01 %) |
15,948,624 (40.68 %) |
39,481 (0.87 %) |
| 148 | tamarin GCA_004024885.1 |
n/a | 27,243 (1.48 %) |
39,487 (1.07 %) |
n/a | 40.80 (99.88 %) |
8,881 (0.03 %) |
1,675,070 (99.97 %) |
6,528,752 (48.25 %) |
1,388,724 (3.61 %) |
16,922,829 (45.18 %) |
38,319 (0.73 %) |
| 149 | tufted capuchin GCF_009761245.1 |
80,991 (3.26 %) |
21,426 (1.96 %) |
22,733 (1.32 %) |
n/a | 40.84 (98.69 %) |
43,216 (1.31 %) |
59,885 (98.69 %) |
5,056,660 (48.03 %) |
783,505 (2.08 %) |
15,052,178 (35.96 %) |
32,890 (0.86 %) |
| 150 | Ugandan red Colobus (RC106 v5 2019) GCF_002776525.5 |
63,486 (2.54 %) |
21,357 (1.88 %) |
22,980 (1.19 %) |
n/a | 40.87 (97.07 %) |
56,505 (2.93 %) |
32,287 (100.00 %) |
5,425,300 (50.81 %) |
949,826 (2.73 %) |
16,126,286 (36.98 %) |
71,044 (1.10 %) |
| 151 | western lowland gorilla (Kamilah 2019) GCF_008122165.1 |
61,950 (2.48 %) |
20,030 (1.78 %) |
20,511 (1.13 %) |
n/a | 40.65 (98.49 %) |
859 (1.51 %) |
6,345 (98.49 %) |
5,311,418 (50.53 %) |
928,667 (8.55 %) |
15,660,901 (40.30 %) |
44,578 (0.92 %) |
| 152 | western lowland gorilla (KB3781 2023) GCF_029281585.1 |
101,242 (3.18 %) |
20,994 (1.57 %) |
41,945 (1.53 %) |
n/a | 40.59 (99.85 %) |
38 (0.15 %) |
637 (100.00 %) |
5,526,927 (51.16 %) |
1,080,693 (20.38 %) |
15,929,020 (48.46 %) |
76,432 (1.35 %) |
| 153 | white-faced saki GCA_004026645.1 |
n/a | 24,422 (1.69 %) |
35,685 (1.16 %) |
n/a | 40.61 (99.91 %) |
11,316 (0.04 %) |
903,646 (99.96 %) |
5,716,344 (47.85 %) |
1,234,286 (3.25 %) |
16,179,207 (39.57 %) |
41,862 (0.89 %) |
| 154 | white-fronted capuchin GCA_004027755.1 |
n/a | 27,984 (1.50 %) |
47,384 (1.05 %) |
n/a | 41.14 (99.86 %) |
13,723 (0.04 %) |
1,552,889 (99.96 %) |
6,023,876 (46.47 %) |
1,002,459 (2.29 %) |
16,673,880 (41.02 %) |
37,693 (0.79 %) |
| 155 | white-tufted-ear marmoset (cj1700 2020) GCF_009663435.1 |
107,273 (3.59 %) |
21,782 (1.87 %) |
21,450 (1.28 %) |
n/a | 40.85 (98.69 %) |
380 (1.31 %) |
1,429 (98.69 %) |
5,135,344 (49.42 %) |
823,949 (3.69 %) |
15,140,752 (38.06 %) |
36,875 (0.90 %) |
| 156 | white-tufted-ear marmoset (maternal 2020) GCA_011078405.1 |
n/a | 21,684 (1.92 %) |
21,053 (1.29 %) |
n/a | 40.97 (99.58 %) |
1,068 (0.42 %) |
216 (100.00 %) |
5,099,933 (50.01 %) |
797,450 (2.45 %) |
15,059,591 (37.67 %) |
36,133 (0.92 %) |
| 157 | white-tufted-ear marmoset (paternal 2020) GCA_011100535.1 |
n/a | 20,939 (1.94 %) |
20,416 (1.31 %) |
n/a | 41.04 (99.58 %) |
788 (0.42 %) |
336 (100.00 %) |
4,869,007 (49.39 %) |
746,577 (2.68 %) |
14,347,286 (37.59 %) |
35,222 (0.94 %) |
| 158 | white-tufted-ear marmoset (paternal X 2020) GCA_011100555.1 |
n/a | 21,709 (1.91 %) |
21,245 (1.29 %) |
70,349 (2.24 %) |
40.95 (99.53 %) |
959 (0.47 %) |
353 (100.00 %) |
5,123,971 (49.94 %) |
785,181 (2.64 %) |
15,163,086 (37.93 %) |
36,768 (0.93 %) |
| 159 | white-tufted-ear marmoset (mCalJac1 2021) GCF_011100555.1 |
104,419 (4.84 %) |
21,801 (1.88 %) |
21,467 (1.27 %) |
n/a | 40.92 (99.52 %) |
1,165 (0.48 %) |
1,233 (100.00 %) |
5,036,591 (47.71 %) |
842,846 (3.26 %) |
15,161,534 (38.08 %) |
37,603 (0.93 %) |
| TOTALS: | total assembly count 159 | |||||||||||
| Additional hubs with collections of assemblies | |||
|---|---|---|---|
| Collection | Hub index pages: | Assembly statistics: | Track statistics: |
| Primates | 159 assemblies | assembly stats | track stats |
| Mammals | 407 assemblies | assembly stats | track stats |
| Birds | 270 assemblies | assembly stats | track stats |
| Fishes | 269 assemblies | assembly stats | track stats |
| other vertebrates | 113 assemblies | assembly stats | track stats |
| Invertebrates | 533 assemblies | assembly stats | track stats |
| Plants | 229 assemblies | assembly stats | track stats |
| Fungi | 544 assemblies | assembly stats | track stats |
| Viruses | 259 assemblies | assembly stats | track stats |
| Bacteria | 64 assemblies | assembly stats | track stats |
| legacy/superseded | 321 assemblies | assembly stats | track stats |
| collections below are subsets of the assemblies above | |||
| VGP - Vertebrate Genome Project | 445 assemblies | assembly stats | track stats |
| CCGP - The California Conservation Genomics Project | 126 assemblies | assembly stats | track stats |
| HPRC - Human Pangenome Reference Consortium | 96 assemblies | assembly stats | track stats |