Bacteria Genomes assembly hubs, assembly statistics
Assemblies from NCBI/Genbank/Refseq sources, subset of bacteria only.
Data resource links
NOTE:
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The
link to genome browser will attach only that single assembly to
the genome browser.
| count |
common name
link to genome browser |
scientific name
and data download |
NCBI assembly |
sequence
count | genome size
nucleotides |
gap
count | unknown bases
(gap size sum) | masking
percent |
|---|
| 1 |
Acinetobacter baumannii (17978UN 2021) |
Acinetobacter baumannii |
GCF_019356215.1_ASM1935621v1 |
4 |
4,075,785 |
0 |
0 |
11.90 |
| 2 |
Bacillus subtilis strain 168 |
Bacillus subtilis subsp. subtilis str. 168 |
GCF_000009045.1_ASM904v1 |
1 |
4,215,606 |
0 |
0 |
11.04 |
| 3 |
E. coli (B C2566 2016) |
Escherichia coli B |
GCF_001559615.2_ASM155961v2 |
1 |
4,478,958 |
0 |
0 |
7.37 |
| 4 |
E. coli (B C3029 2016) |
Escherichia coli B |
GCF_001559635.1_ASM155963v1 |
1 |
4,569,185 |
0 |
0 |
6.98 |
| 5 |
E. coli (BE104 2019) |
Escherichia coli |
GCF_005890115.1_ASM589011v1 |
1 |
4,775,122 |
0 |
0 |
7.40 |
| 6 |
E. coli (K-12 BW25113 2014 refseq) |
Escherichia coli BW25113 |
GCF_000750555.1_ASM75055v1 |
1 |
4,631,469 |
0 |
0 |
7.44 |
| 7 |
E. coli (K-12 C3026 2016) |
Escherichia coli K-12 |
GCF_001559675.1_ASM155967v1 |
2 |
4,959,179 |
0 |
0 |
7.36 |
| 8 |
E. coli (K-12 DHB4 2016) |
Escherichia coli K-12 |
GCF_001559655.1_ASM155965v1 |
2 |
4,779,803 |
0 |
0 |
7.59 |
| 9 |
E. coli (K-12 MG1655 2013) |
Escherichia coli str. K-12 substr. MG1655 |
GCF_000005845.2_ASM584v2 |
1 |
4,641,652 |
0 |
0 |
7.53 |
| 10 |
Limosilactobacillus fermentum YL-11 |
Limosilactobacillus fermentum |
GCF_003860425.1_ASM386042v1 |
1 |
1,908,534 |
0 |
0 |
5.80 |
| 11 |
Limosilactobacillus fermentum SRCM 103290 |
Limosilactobacillus fermentum |
GCF_004063635.1_ASM406363v1 |
1 |
2,120,877 |
0 |
0 |
4.50 |
| 12 |
Limosilactobacillus fermentum AGR1487 |
Limosilactobacillus fermentum |
GCF_011032745.1_ASM1103274v1 |
1 |
1,939,032 |
0 |
0 |
4.69 |
| 13 |
Limosilactobacillus fermentum AGR1485 |
Limosilactobacillus fermentum |
GCF_011032765.1_ASM1103276v1 |
1 |
2,226,862 |
0 |
0 |
5.46 |
| 14 |
Mycobacterium avium (hominissuis A5 2014) |
Mycobacterium avium subsp. hominissuis A5 |
GCF_000696715.1_Maq_reference_guided_assembly |
50 |
4,870,506 |
0 |
0 |
27.36 |
| 15 |
Mycobacterium palustre (DSM 44572 2017) |
Mycobacterium palustre |
GCF_002101785.1_ASM210178v1 |
158 |
6,037,522 |
0 |
0 |
24.93 |
| 16 |
Mycobacterium tuberculosis (H37Rv 2013) |
Mycobacterium tuberculosis H37Rv |
GCF_000195955.2_ASM19595v2 |
1 |
4,411,532 |
0 |
0 |
17.70 |
| 17 |
Plasmodium malariae (2016) |
Plasmodium malariae |
GCF_900090045.1_PmUG01 |
62 |
33,612,066 |
0 |
0 |
54.84 |
| 18 |
Pseudomonas aeruginosa (PAO1 2006) |
Pseudomonas aeruginosa PAO1 |
GCF_000006765.1_ASM676v1 |
1 |
6,264,404 |
0 |
0 |
23.71 |
| 19 |
Pseudomonas fluorescens (SBW25 2009) |
Pseudomonas fluorescens SBW25 |
GCF_000009225.2_ASM922v1 |
1 |
6,722,539 |
0 |
0 |
14.26 |
| 20 |
Salmonella enterica (Typhimurium LT2 2016) |
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
GCF_000006945.2_ASM694v2 |
2 |
4,951,383 |
0 |
0 |
9.55 |
| TOTALS: | total assembly count 20 |
293 |
116,192,016 |
0 |
0 |
|
|---|