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Assemblies from NCBI/Genbank/Refseq sources, subset of viral only.
| count | common name link to genome browser |
ncbiGene | gc5 base | gaps | assembly sequences |
Repeat Masker |
TRF simpleRepeat |
window Masker |
cpg islands |
|---|---|---|---|---|---|---|---|---|---|
| 1 | adeno-associated virus 2 (1993) GCF_000838645.1 |
14 (89.01 %) |
53.80 (99.91 %) |
n/a | 1 (100.00 %) |
8 (3.18 %) |
n/a | 0 (0.00 %) |
1 (54.43 %) |
| 2 | Adult diarrheal rotavirus strain J19 (J19 2005) GCF_000864245.1 |
11 (95.04 %) |
33.42 (99.83 %) |
n/a | 11 (100.00 %) |
3 (0.00 %) |
1 (0.20 %) |
37 (2.83 %) |
0 (0.00 %) |
| 3 | Aichi virus 1 (A846/88 1998) GCF_000861885.1 |
1 (88.50 %) |
58.90 (99.99 %) |
n/a | 1 (100.00 %) |
5 (1.09 %) |
n/a | 8 (2.47 %) |
1 (81.27 %) |
| 4 | Alphapapillomavirus 4 (1991) GCF_000864945.1 |
7 (86.62 %) |
48.40 (100.00 %) |
n/a | 1 (100.00 %) |
5 (1.34 %) |
1 (0.50 %) |
7 (2.05 %) |
0 (0.00 %) |
| 5 | Argentinian mammarenavirus (XJ13 2003) GCF_000856545.1 |
4 (95.69 %) |
41.57 (99.95 %) |
n/a | 2 (100.00 %) |
4 (0.24 %) |
1 (0.48 %) |
2 (0.58 %) |
0 (0.00 %) |
| 6 | Astrovirus MLB2 (MLB2/human/Stl/WD0559/2008 2012) GCF_000895575.1 |
3 (99.13 %) |
40.52 (99.93 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (2.01 %) |
0 (0.00 %) |
| 7 | Astrovirus VA4 (VA4/human/Nepal/S5363/2008 2012) GCF_000897955.1 |
3 (97.62 %) |
42.99 (99.95 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 1 (0.11 %) |
0 (0.00 %) |
| 8 | Astrovirus MLB3 (MLB3/human/Vellore/26564/2004 2012) GCF_000899535.1 |
3 (99.15 %) |
40.00 (99.93 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 4 (2.19 %) |
0 (0.00 %) |
| 9 | Astrovirus VA3 (VA3/human/Vellore/28054/2005 2012) GCF_000901475.1 |
3 (98.01 %) |
41.78 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 2 (0.29 %) |
0 (0.00 %) |
| 10 | Australian bat lyssavirus (insectivorous isolate 1999) GCF_000850325.1 |
5 (91.79 %) |
44.15 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 8 (0.61 %) |
0 (0.00 %) |
| 11 | Banna virus strain JKT-6423 (JKT-6423 JKT-6423 2000) GCF_000858185.1 |
12 (86.10 %) |
39.33 (99.89 %) |
n/a | 12 (100.00 %) |
3 (0.00 %) |
n/a | 11 (0.64 %) |
0 (0.00 %) |
| 12 | Barmah Forest virus (BH2193 1997) GCF_000847585.1 |
5 (95.39 %) |
48.55 (99.97 %) |
2 (0.02 %) |
3 (99.98 %) |
4 (0.59 %) |
n/a | 7 (2.47 %) |
5 (15.26 %) |
| 13 | Bovine herpesvirus type 1.1 (NVSL challenge 97-11 2022) GCF_008777455.1 |
75 (84.84 %) |
72.42 (100.00 %) |
n/a | 1 (100.00 %) |
n/a | 116 (4.31 %) |
1,304 (33.41 %) |
1 (99.99 %) |
| 14 | Bunyamwera virus (1991) GCF_000849925.1 |
4 (95.34 %) |
35.16 (99.97 %) |
n/a | 3 (100.00 %) |
3 (0.00 %) |
n/a | 30 (3.12 %) |
0 (0.00 %) |
| 15 | Cercopithecine alphaherpesvirus 2 (B264 2004) GCF_000846965.1 |
80 (78.07 %) |
75.97 (100.00 %) |
n/a | 1 (100.00 %) |
169 (6.25 %) |
180 (5.92 %) |
1,059 (33.71 %) |
1 (100.00 %) |
| 16 | Chandipura virus (CIN 0451 2013) GCF_000906815.1 |
5 (96.34 %) |
42.53 (100.00 %) |
n/a | 1 (100.00 %) |
4 (0.29 %) |
n/a | 19 (1.75 %) |
0 (0.00 %) |
| 17 | Chikungunya virus (S27-African prototype 2002) GCF_000854045.1 |
2 (94.47 %) |
50.04 (99.99 %) |
n/a | 1 (100.00 %) |
5 (0.87 %) |
n/a | 3 (1.76 %) |
7 (34.06 %) |
| 18 | Cosavirus A (HCoSV-A1 0553 2009) GCF_000885595.1 |
1 (83.53 %) |
43.75 (99.97 %) |
n/a | 1 (100.00 %) |
4 (0.63 %) |
n/a | 5 (1.90 %) |
0 (0.00 %) |
| 19 | Cowpox virus (Brighton Red 2002) GCF_000839185.1 |
233 (91.92 %) |
33.40 (100.00 %) |
n/a | 1 (100.00 %) |
41 (0.80 %) |
64 (2.52 %) |
1,041 (9.40 %) |
0 (0.00 %) |
| 20 | Crimean-Congo hemorrhagic fever orthonairovirus (IbAr10200 2003) GCF_000854165.1 |
3 (95.80 %) |
42.23 (99.97 %) |
n/a | 3 (100.00 %) |
3 (0.00 %) |
1 (0.22 %) |
26 (1.53 %) |
0 (0.00 %) |
| 21 | Dengue virus 1 (clone 45AZ5 Nauru Island 1997) GCF_000862125.1 |
1 (94.82 %) |
46.67 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.68 %) |
0 (0.00 %) |
| 22 | Dengue virus 4 (clone rDEN4 2001) GCF_000865065.1 |
4 (98.81 %) |
47.13 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 3 (0.27 %) |
0 (0.00 %) |
| 23 | Dengue virus 3 (D3/H/IMTSSA-SRI/2000/1266 Sri Lanka 2007) GCF_000866625.1 |
5 (98.92 %) |
46.71 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.60 %) |
0 (0.00 %) |
| 24 | Dengue virus 2 (16681/84 Thailand 1993) GCF_000871845.1 |
5 (98.86 %) |
45.82 (99.97 %) |
n/a | 1 (100.00 %) |
4 (0.27 %) |
n/a | 2 (0.16 %) |
0 (0.00 %) |
| 25 | Dhori thogotovirus (Dhori/1313/61 2017) GCF_002116195.1 |
6 (95.15 %) |
45.84 (99.90 %) |
n/a | 6 (100.00 %) |
3 (0.00 %) |
n/a | 12 (1.33 %) |
0 (0.00 %) |
| 26 | Dugbe orthonairovirus (ArD44313 1995) GCF_000850985.1 |
3 (96.61 %) |
40.19 (99.98 %) |
n/a | 3 (100.00 %) |
4 (0.27 %) |
n/a | 41 (3.15 %) |
0 (0.00 %) |
| 27 | Duvenhage lyssavirus (86132SA 2013) GCF_000905375.1 |
5 (90.59 %) |
44.22 (99.99 %) |
1 (0.01 %) |
2 (99.99 %) |
3 (0.00 %) |
n/a | 7 (0.72 %) |
0 (0.00 %) |
| 28 | Eastern equine encephalitis virus (ssp. North American variant 1991) GCF_000862705.1 |
5 (96.00 %) |
48.71 (100.00 %) |
n/a | 1 (100.00 %) |
7 (0.91 %) |
n/a | 3 (0.64 %) |
5 (23.55 %) |
| 29 | Eastern chimpanzee simian foamy virus (2018) GCF_003032765.1 |
5 (93.39 %) |
37.99 (99.97 %) |
n/a | 1 (100.00 %) |
5 (0.77 %) |
n/a | 8 (0.77 %) |
0 (0.00 %) |
| 30 | Encephalomyocarditis virus (Ruckert 1993) GCF_000862985.1 |
3 (87.80 %) |
49.47 (100.00 %) |
n/a | 1 (100.00 %) |
4 (1.68 %) |
1 (1.68 %) |
2 (1.83 %) |
0 (0.00 %) |
| 31 | Enterovirus C (human poliovirus 1 Mahoney 1982) GCF_000861165.1 |
5 (98.35 %) |
46.34 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 3 (0.40 %) |
1 (6.95 %) |
| 32 | Enterovirus D (Enterovirus 70 1993) GCF_000861205.1 |
1 (89.14 %) |
42.80 (100.00 %) |
3 (0.04 %) |
4 (99.96 %) |
3 (0.00 %) |
n/a | 0 (0.00 %) |
0 (0.00 %) |
| 33 | Enterovirus A (1994) GCF_000861905.1 |
1 (88.79 %) |
47.94 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 1 (0.09 %) |
1 (3.32 %) |
| 34 | Epstein-Barr virus type 2 (AG876 2007) GCF_000872045.1 |
114 (68.90 %) |
59.54 (100.00 %) |
n/a | 1 (100.00 %) |
34 (0.79 %) |
29 (5.78 %) |
498 (10.10 %) |
24 (45.98 %) |
| 35 | Epstein-Barr virus (Raji 2005) GCF_002402265.1 |
98 (77.44 %) |
59.50 (100.00 %) |
n/a | 1 (100.00 %) |
30 (0.66 %) |
34 (5.62 %) |
577 (10.56 %) |
27 (45.97 %) |
| 36 | Equine herpesvirus 1 (Ab4 1993) GCA_000844025.1 |
81 (83.51 %) |
56.66 (100.00 %) |
n/a | 1 (100.00 %) |
23 (0.73 %) |
28 (3.15 %) |
306 (5.68 %) |
2 (99.10 %) |
| 37 | European bat 1 lyssavirus (RV9; 9395GER 2007) GCF_000870765.1 |
5 (90.43 %) |
44.65 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 13 (1.08 %) |
0 (0.00 %) |
| 38 | Gallid alphaherpesvirus 1 (SA-2 1999) GCA_000847005.2 |
90 (80.77 %) |
47.74 (99.98 %) |
n/a | 14 (100.00 %) |
11 (0.22 %) |
9 (0.61 %) |
221 (1.97 %) |
23 (30.48 %) |
| 39 | GB virus C (1996) GCF_000862005.1 |
1 (91.81 %) |
59.09 (99.98 %) |
1 (0.01 %) |
2 (99.99 %) |
3 (0.00 %) |
n/a | 15 (1.67 %) |
2 (82.30 %) |
| 40 | Hantaan orthohantavirus (76-118 2003) GCF_000856085.1 |
3 (94.17 %) |
38.56 (99.96 %) |
n/a | 3 (100.00 %) |
3 (0.00 %) |
n/a | 9 (0.78 %) |
0 (0.00 %) |
| 41 | Hendra henipavirus (1998) GCF_000852685.1 |
9 (82.12 %) |
39.43 (99.98 %) |
n/a | 1 (100.00 %) |
5 (0.38 %) |
n/a | 13 (0.75 %) |
0 (0.00 %) |
| 42 | Hepatitis delta virus (1993) GCF_000856565.1 |
2 (38.35 %) |
58.81 (99.88 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
1 (2.68 %) |
1 (3.63 %) |
1 (71.11 %) |
| 43 | Hepatitis B virus (2015) GCF_000861825.2 |
4 (55.31 %) |
48.46 (99.94 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 0 (0.00 %) |
1 (12.45 %) |
| 44 | Hepatitis C virus genotype 1 (H77 1997) GCF_000861845.1 |
3 (93.68 %) |
58.24 (99.99 %) |
n/a | 1 (100.00 %) |
5 (1.33 %) |
6 (1.40 %) |
13 (2.88 %) |
1 (90.43 %) |
| 45 | Hepatovirus A (1993) GCF_000860505.1 |
3 (100.00 %) |
37.87 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.45 %) |
1 (0.47 %) |
1 (0.53 %) |
0 (0.00 %) |
| 46 | Herpes simplex virus type 1 (17 1990) GCF_000859985.2 |
81 (86.40 %) |
68.30 (100.00 %) |
n/a | 1 (100.00 %) |
81 (2.72 %) |
51 (2.90 %) |
932 (18.12 %) |
1 (100.00 %) |
| 47 | human gammaherpesvirus 8 (JSC-1 2009) GCA_027939395.1 |
102 (83.23 %) |
53.77 (100.00 %) |
n/a | 1 (100.00 %) |
11 (1.00 %) |
29 (3.04 %) |
198 (4.58 %) |
9 (84.78 %) |
| 48 | human polyomavirus 1 (1993) GCF_000837865.1 |
7 (89.15 %) |
39.53 (99.94 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
2 (2.45 %) |
13 (4.13 %) |
0 (0.00 %) |
| 49 | human gammaherpesvirus 8 (GK18 2007) GCF_000838265.1 |
113 (85.53 %) |
53.76 (100.00 %) |
n/a | 1 (100.00 %) |
10 (0.18 %) |
29 (2.88 %) |
151 (3.93 %) |
9 (84.42 %) |
| 50 | human papillomavirus type 60 (1995) GCF_000838505.1 |
7 (92.85 %) |
36.94 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.83 %) |
n/a | 12 (2.15 %) |
1 (3.27 %) |
| 51 | human papillomavirus type 48 (1995) GCF_000839365.1 |
7 (93.41 %) |
36.76 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
1 (0.58 %) |
18 (3.61 %) |
1 (4.07 %) |
| 52 | human parvovirus B19 (J35 1999) GCF_000839645.1 |
6 (81.47 %) |
43.81 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
4 (2.93 %) |
13 (4.72 %) |
2 (12.12 %) |
| 53 | human papillomavirus type 50 (1995) GCF_000841625.1 |
7 (92.78 %) |
36.85 (99.94 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
1 (0.53 %) |
14 (2.00 %) |
0 (0.00 %) |
| 54 | human erythrovirus V9 (V9 2001) GCF_000841965.1 |
6 (90.67 %) |
42.09 (99.94 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 9 (1.75 %) |
0 (0.00 %) |
| 55 | human mastadenovirus C (1993) GCF_000845085.1 |
63 (97.51 %) |
55.20 (99.99 %) |
n/a | 1 (100.00 %) |
13 (0.89 %) |
1 (0.12 %) |
105 (4.66 %) |
5 (70.08 %) |
| 56 | human betaherpesvirus 5 (Merlin 2004) GCF_000845245.1 |
194 (84.91 %) |
57.48 (100.00 %) |
n/a | 1 (100.00 %) |
74 (1.33 %) |
28 (0.67 %) |
1,047 (7.96 %) |
1 (99.99 %) |
| 57 | human betaherpesvirus 6A (U1102 1995 refseq) GCF_000845685.2 |
115 (79.56 %) |
42.44 (100.00 %) |
n/a | 1 (100.00 %) |
33 (1.67 %) |
36 (4.27 %) |
603 (9.83 %) |
3 (13.72 %) |
| 58 | human mastadenovirus D (Hicks; NIAID V-209-003-014 2008) GCF_000845985.1 |
47 (93.93 %) |
57.10 (99.99 %) |
n/a | 1 (100.00 %) |
10 (0.92 %) |
1 (0.13 %) |
59 (2.95 %) |
3 (67.41 %) |
| 59 | human papillomavirus type 92 (2003) GCF_000846285.1 |
7 (93.86 %) |
39.96 (99.99 %) |
n/a | 1 (100.00 %) |
7 (2.48 %) |
3 (1.50 %) |
7 (2.92 %) |
1 (4.21 %) |
| 60 | human betaherpesvirus 6B (Z29 1999) GCF_000846365.1 |
128 (82.45 %) |
42.77 (100.00 %) |
n/a | 1 (100.00 %) |
27 (1.57 %) |
20 (3.84 %) |
652 (8.84 %) |
6 (15.35 %) |
| 61 | human mastadenovirus F (Dugan 1993) GCF_000846685.1 |
44 (94.91 %) |
51.22 (99.99 %) |
n/a | 1 (100.00 %) |
6 (0.32 %) |
n/a | 63 (2.23 %) |
1 (62.53 %) |
| 62 | human mastadenovirus A (Huie 1993) GCF_000846805.1 |
43 (94.41 %) |
46.52 (100.00 %) |
n/a | 1 (100.00 %) |
8 (0.61 %) |
n/a | 73 (3.33 %) |
6 (30.52 %) |
| 63 | human T-lymphotropic virus 2 (1993) GCF_000847505.1 |
9 (94.24 %) |
53.82 (99.98 %) |
n/a | 1 (100.00 %) |
5 (1.11 %) |
n/a | 16 (2.41 %) |
2 (6.46 %) |
| 64 | human betaherpesvirus 7 (RK 1995) GCF_000848125.1 |
111 (79.51 %) |
36.22 (100.00 %) |
n/a | 1 (100.00 %) |
16 (1.65 %) |
34 (8.04 %) |
791 (15.85 %) |
3 (5.14 %) |
| 65 | human respirovirus 1 (Washington 1964 2002) GCF_000848705.1 |
10 (99.19 %) |
37.24 (100.00 %) |
n/a | 1 (100.00 %) |
7 (2.19 %) |
1 (0.25 %) |
4 (1.69 %) |
0 (0.00 %) |
| 66 | human respirovirus 3 (1998) GCF_000850205.1 |
9 (93.58 %) |
34.52 (99.99 %) |
n/a | 1 (100.00 %) |
6 (1.09 %) |
n/a | 11 (1.89 %) |
0 (0.00 %) |
| 67 | human coronavirus 229E (2001) GCF_000853505.1 |
9 (97.14 %) |
38.26 (99.99 %) |
n/a | 1 (100.00 %) |
5 (0.31 %) |
2 (0.29 %) |
57 (2.91 %) |
0 (0.00 %) |
| 68 | human coronavirus NL63 (Amsterdam I 2004) GCF_000853865.1 |
8 (97.86 %) |
34.46 (99.99 %) |
n/a | 1 (100.00 %) |
9 (1.09 %) |
n/a | 84 (5.24 %) |
0 (0.00 %) |
| 69 | human orthopneumovirus (B1 1997) GCF_000855545.1 |
10 (97.35 %) |
33.56 (100.00 %) |
n/a | 1 (100.00 %) |
11 (1.61 %) |
2 (0.52 %) |
16 (3.21 %) |
0 (0.00 %) |
| 70 | human immunodeficiency virus 2 (BEN 1993) GCF_000856385.1 |
12 (84.81 %) |
45.66 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
1 (0.98 %) |
10 (1.44 %) |
0 (0.00 %) |
| 71 | human mastadenovirus B (Slobitski 2008) GCF_000857085.1 |
46 (93.74 %) |
48.88 (99.99 %) |
n/a | 1 (100.00 %) |
10 (0.82 %) |
3 (0.30 %) |
50 (2.47 %) |
6 (39.41 %) |
| 72 | human adenovirus 5 (2004) GCF_000857865.1 |
42 (90.68 %) |
55.20 (99.99 %) |
n/a | 1 (100.00 %) |
12 (0.95 %) |
n/a | 99 (4.47 %) |
5 (69.88 %) |
| 73 | human adenovirus 35 (2004) GCF_000857885.1 |
44 (93.67 %) |
48.88 (99.99 %) |
n/a | 1 (100.00 %) |
8 (0.68 %) |
3 (0.30 %) |
80 (3.56 %) |
6 (39.41 %) |
| 74 | human alphaherpesvirus 2 (HG52 2013) GCF_000858385.2 |
86 (83.37 %) |
70.38 (100.00 %) |
n/a | 1 (100.00 %) |
124 (3.80 %) |
64 (3.26 %) |
1,158 (23.65 %) |
1 (99.99 %) |
| 75 | human mastadenovirus D (2004) GCF_000858625.1 |
21 (47.83 %) |
56.58 (100.00 %) |
4 (0.01 %) |
5 (99.99 %) |
12 (1.24 %) |
n/a | 61 (3.14 %) |
3 (66.84 %) |
| 76 | human adenovirus 1 (2004) GCF_000858645.1 |
44 (91.94 %) |
55.26 (100.00 %) |
n/a | 1 (100.00 %) |
12 (0.98 %) |
2 (0.11 %) |
103 (4.79 %) |
6 (70.17 %) |
| 77 | human coronavirus HKU1 (HKU1 2004) GCF_000858765.1 |
10 (98.07 %) |
32.06 (100.00 %) |
n/a | 1 (100.00 %) |
8 (0.72 %) |
1 (1.60 %) |
89 (5.62 %) |
0 (0.00 %) |
| 78 | human picobirnavirus (Hy005102 2005) GCF_000859285.1 |
3 (92.15 %) |
46.02 (100.00 %) |
n/a | 2 (100.00 %) |
3 (0.00 %) |
n/a | 0 (0.00 %) |
0 (0.00 %) |
| 79 | human adenovirus 2 (2004) GCF_000859465.1 |
42 (90.84 %) |
55.20 (99.99 %) |
n/a | 1 (100.00 %) |
13 (0.89 %) |
1 (0.12 %) |
105 (4.66 %) |
5 (70.08 %) |
| 80 | human adenovirus 7 (2004) GCF_000859485.1 |
45 (92.24 %) |
51.27 (99.99 %) |
n/a | 1 (100.00 %) |
9 (0.56 %) |
1 (1.54 %) |
61 (2.28 %) |
7 (43.72 %) |
| 81 | human mastadenovirus E (vaccine (CL 68578) 2001) GCF_000859665.1 |
40 (96.48 %) |
57.67 (99.99 %) |
n/a | 1 (100.00 %) |
9 (0.65 %) |
n/a | 107 (4.08 %) |
5 (73.25 %) |
| 82 | human parvovirus 4 G1 (2005) GCF_000861005.1 |
2 (89.92 %) |
44.94 (99.94 %) |
n/a | 1 (100.00 %) |
4 (0.87 %) |
2 (1.52 %) |
4 (0.70 %) |
1 (3.85 %) |
| 83 | human astrovirus (1993) GCF_000861865.1 |
3 (97.58 %) |
44.83 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.88 %) |
1 (1.34 %) |
9 (2.08 %) |
0 (0.00 %) |
| 84 | human papillomavirus type 7 (1993) GCF_000861925.1 |
6 (82.97 %) |
39.53 (99.98 %) |
n/a | 1 (100.00 %) |
6 (1.73 %) |
1 (0.59 %) |
13 (3.49 %) |
0 (0.00 %) |
| 85 | human papillomavirus type 6b (type 6b (HPV6b) 1985) GCF_000861945.1 |
9 (89.64 %) |
40.87 (99.97 %) |
n/a | 1 (100.00 %) |
4 (1.39 %) |
1 (0.76 %) |
15 (3.21 %) |
0 (0.00 %) |
| 86 | human papillomavirus type 90 (2002) GCF_000862685.1 |
7 (82.73 %) |
46.65 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.95 %) |
n/a | 10 (3.96 %) |
1 (2.53 %) |
| 87 | human papillomavirus type 49 (1993) GCF_000862825.1 |
6 (93.19 %) |
41.11 (100.00 %) |
n/a | 1 (100.00 %) |
4 (0.81 %) |
n/a | 11 (2.66 %) |
0 (0.00 %) |
| 88 | human orthorubulavirus 2 (1991) GCF_000863525.1 |
8 (98.61 %) |
38.41 (99.99 %) |
n/a | 1 (100.00 %) |
5 (0.38 %) |
n/a | 6 (0.27 %) |
0 (0.00 %) |
| 89 | human T-cell leukemia virus type I (1998) GCF_000863585.1 |
11 (81.17 %) |
53.47 (99.98 %) |
n/a | 1 (100.00 %) |
4 (0.33 %) |
n/a | 19 (2.50 %) |
2 (12.06 %) |
| 90 | human papillomavirus 9 (1993) GCF_000863685.1 |
7 (94.00 %) |
41.00 (99.95 %) |
n/a | 1 (100.00 %) |
5 (1.14 %) |
2 (0.93 %) |
13 (2.45 %) |
1 (4.63 %) |
| 91 | human papillomavirus type 41 (1991) GCF_000863845.1 |
11 (90.82 %) |
46.94 (99.95 %) |
n/a | 1 (100.00 %) |
4 (0.45 %) |
n/a | 3 (0.28 %) |
1 (3.68 %) |
| 92 | human papillomavirus type 16 (1993) GCF_000863945.3 |
11 (87.67 %) |
36.53 (99.99 %) |
n/a | 1 (100.00 %) |
6 (3.26 %) |
1 (0.32 %) |
12 (4.50 %) |
0 (0.00 %) |
| 93 | human papillomavirus type 34 (1993) GCF_000863965.1 |
6 (85.10 %) |
38.25 (99.96 %) |
n/a | 1 (100.00 %) |
4 (2.33 %) |
3 (1.17 %) |
8 (3.52 %) |
0 (0.00 %) |
| 94 | human papillomavirus type 54 (1995) GCF_000864725.1 |
7 (84.57 %) |
41.88 (99.95 %) |
n/a | 1 (100.00 %) |
5 (2.32 %) |
n/a | 9 (3.05 %) |
0 (0.00 %) |
| 95 | human immunodeficiency virus 1 (1998) GCF_000864765.1 |
14 (93.78 %) |
42.11 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.57 %) |
1 (0.34 %) |
18 (3.29 %) |
1 (2.29 %) |
| 96 | human papillomavirus type 96 (2003) GCF_000864825.1 |
7 (97.38 %) |
40.31 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.81 %) |
n/a | 21 (3.83 %) |
1 (4.33 %) |
| 97 | human papillomavirus 4 (1993) GCF_000864845.1 |
7 (92.18 %) |
38.53 (99.96 %) |
n/a | 1 (100.00 %) |
5 (0.71 %) |
1 (0.35 %) |
23 (3.75 %) |
0 (0.00 %) |
| 98 | human papillomavirus type 10 (1993) GCF_000864905.1 |
7 (84.68 %) |
45.89 (99.95 %) |
n/a | 1 (100.00 %) |
5 (1.78 %) |
n/a | 16 (3.86 %) |
0 (0.00 %) |
| 99 | human papillomavirus type 32 (1993) GCF_000864925.1 |
6 (84.42 %) |
40.98 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.83 %) |
n/a | 9 (1.96 %) |
0 (0.00 %) |
| 100 | human papillomavirus type 63 (1993) GCF_000865565.1 |
7 (91.55 %) |
40.44 (99.96 %) |
n/a | 1 (100.00 %) |
5 (1.20 %) |
1 (0.59 %) |
5 (0.53 %) |
0 (0.00 %) |
| 101 | human papillomavirus type 53 (1993) GCF_000865685.1 |
7 (66.96 %) |
40.14 (99.99 %) |
n/a | 1 (100.00 %) |
6 (2.47 %) |
n/a | 24 (6.16 %) |
0 (0.00 %) |
| 102 | human papillomavirus type 26 (1993) GCF_000866485.1 |
6 (84.85 %) |
38.60 (100.00 %) |
n/a | 1 (100.00 %) |
8 (2.74 %) |
2 (0.45 %) |
14 (5.89 %) |
0 (0.00 %) |
| 103 | human papillomavirus 5 (1993) GCF_000866505.1 |
8 (92.64 %) |
42.39 (99.99 %) |
n/a | 1 (100.00 %) |
9 (2.94 %) |
1 (0.39 %) |
13 (3.01 %) |
1 (7.11 %) |
| 104 | human papillomavirus 103 (Qv33725 2006) GCF_000868225.1 |
6 (88.01 %) |
41.58 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.45 %) |
n/a | 19 (3.06 %) |
0 (0.00 %) |
| 105 | human papillomavirus type 101 (Qv23954 2006) GCF_000869845.1 |
6 (89.06 %) |
43.12 (99.94 %) |
n/a | 1 (100.00 %) |
4 (0.33 %) |
n/a | 5 (0.61 %) |
0 (0.00 %) |
| 106 | human polyomavirus 3 (Stockholm 60 2007) GCF_000873085.1 |
6 (88.17 %) |
39.37 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
1 (0.85 %) |
26 (6.90 %) |
0 (0.00 %) |
| 107 | human papillomavirus type 88 (2008) GCF_000874925.1 |
7 (92.19 %) |
40.11 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
1 (0.35 %) |
6 (0.71 %) |
1 (4.00 %) |
| 108 | human TMEV-like cardiovirus (2008) GCF_000875265.1 |
3 (86.45 %) |
43.58 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.84 %) |
0 (0.00 %) |
| 109 | human mastadenovirus B (GB 2008) GCF_000880515.1 |
48 (93.42 %) |
51.05 (99.99 %) |
n/a | 1 (100.00 %) |
7 (0.47 %) |
1 (0.18 %) |
41 (1.61 %) |
7 (43.26 %) |
| 110 | human papillomavirus type 112 (2009) GCF_000882135.1 |
7 (93.62 %) |
37.52 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.73 %) |
1 (3.81 %) |
| 111 | human T-lymphotropic virus 4 (1863LE 2009) GCF_000882595.1 |
8 (77.85 %) |
56.28 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.51 %) |
n/a | 30 (5.68 %) |
3 (16.69 %) |
| 112 | human bocavirus 2c PK (PK-5510 2009) GCF_000882675.1 |
4 (87.74 %) |
41.59 (99.98 %) |
1 (0.02 %) |
2 (99.98 %) |
5 (1.23 %) |
n/a | 5 (0.98 %) |
0 (0.00 %) |
| 113 | human bocavirus 3 (W471 2009) GCF_000882855.1 |
4 (88.44 %) |
42.16 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 5 (1.95 %) |
1 (4.96 %) |
| 114 | human papillomavirus 108 (2009) GCF_000883655.1 |
5 (88.56 %) |
42.65 (99.94 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 9 (1.38 %) |
0 (0.00 %) |
| 115 | human papillomavirus 109 (2009) GCF_000883695.1 |
7 (92.87 %) |
38.28 (99.99 %) |
n/a | 1 (100.00 %) |
5 (0.94 %) |
1 (0.48 %) |
19 (3.13 %) |
1 (3.23 %) |
| 116 | human papillomavirus 116 (HPV116 2009) GCF_000884175.1 |
7 (93.82 %) |
38.50 (99.94 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 3 (0.40 %) |
1 (4.73 %) |
| 117 | human mastadenovirus A (2004) GCF_000884295.1 |
41 (94.00 %) |
46.52 (100.00 %) |
n/a | 1 (100.00 %) |
8 (0.61 %) |
n/a | 73 (3.33 %) |
6 (30.52 %) |
| 118 | human cosavirus B (HCoSV-B1 2263 2009) GCF_000884955.1 |
1 (88.49 %) |
43.79 (100.00 %) |
1 (0.01 %) |
2 (99.99 %) |
4 (0.47 %) |
n/a | 6 (1.35 %) |
0 (0.00 %) |
| 119 | human adenovirus 54 (Kobe-H 2009) GCF_000885675.1 |
40 (91.15 %) |
54.91 (100.00 %) |
n/a | 1 (100.00 %) |
9 (0.74 %) |
n/a | 65 (2.61 %) |
3 (66.98 %) |
| 120 | human bocavirus 4 NI (HBoV4-NI-385 2009) GCF_000886375.1 |
6 (92.83 %) |
40.41 (99.92 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 5 (1.06 %) |
0 (0.00 %) |
| 121 | human papillomavirus 132 (27-50 2011) GCF_000888015.1 |
7 (93.36 %) |
37.94 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 12 (1.89 %) |
0 (0.00 %) |
| 122 | human polyomavirus 6 (607a 2010) GCF_000888495.1 |
6 (89.67 %) |
42.66 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 5 (0.83 %) |
0 (0.00 %) |
| 123 | human papillomavirus 121 (NJ3301 2010) GCF_000889075.1 |
7 (92.45 %) |
37.74 (99.97 %) |
n/a | 1 (100.00 %) |
4 (0.41 %) |
n/a | 9 (0.98 %) |
0 (0.00 %) |
| 124 | human polyomavirus 7 (713a 2010) GCF_000889175.1 |
6 (89.14 %) |
42.91 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (1.25 %) |
0 (0.00 %) |
| 125 | human papillomavirus type 128 (2011) GCF_000889675.1 |
7 (92.33 %) |
35.98 (99.94 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 16 (3.18 %) |
0 (0.00 %) |
| 126 | human papillomavirus 134 (39-65 2011) GCF_000889695.1 |
7 (92.69 %) |
38.14 (99.95 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 10 (1.48 %) |
0 (0.00 %) |
| 127 | human papillomavirus 127 (R3a 2010) GCF_000890115.1 |
8 (93.50 %) |
36.98 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
2 (0.79 %) |
18 (2.79 %) |
1 (3.20 %) |
| 128 | human papillomavirus type 131 (27-49 2011) GCF_000890535.1 |
7 (93.15 %) |
37.03 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 17 (2.73 %) |
0 (0.00 %) |
| 129 | human papillomavirus type 129 (2011) GCF_000891495.1 |
7 (93.07 %) |
37.31 (99.94 %) |
n/a | 1 (100.00 %) |
4 (0.82 %) |
n/a | 3 (0.35 %) |
0 (0.00 %) |
| 130 | human polyomavirus 9 (HPyV9 2011) GCF_000891615.1 |
6 (88.18 %) |
39.16 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 20 (4.74 %) |
0 (0.00 %) |
| 131 | human papillomavirus 126 (HPV126 2011) GCF_000896435.1 |
7 (91.96 %) |
38.05 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 18 (2.68 %) |
1 (2.92 %) |
| 132 | human papillomavirus type 137 (NJ2801H 2012) GCF_000897255.1 |
7 (93.60 %) |
37.57 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.32 %) |
n/a | 16 (2.39 %) |
0 (0.00 %) |
| 133 | human papillomavirus 135 (NJ3500 2012) GCF_000898235.1 |
7 (92.24 %) |
36.86 (99.96 %) |
n/a | 1 (100.00 %) |
5 (1.56 %) |
1 (0.67 %) |
14 (2.77 %) |
0 (0.00 %) |
| 134 | human papillomavirus type 144 (CL3740 2012) GCF_000898255.1 |
7 (92.09 %) |
38.23 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 9 (1.32 %) |
0 (0.00 %) |
| 135 | human papillomavirus 140 (NJ2801C1 2012) GCF_000898855.1 |
7 (91.69 %) |
39.71 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.79 %) |
n/a | 4 (1.28 %) |
0 (0.00 %) |
| 136 | human papillomavirus 166 (KC9 2012) GCF_000899515.1 |
6 (92.72 %) |
38.29 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.79 %) |
0 (0.00 %) |
| 137 | human papillomavirus 136 (CL3865 2012) GCF_000899695.1 |
7 (91.83 %) |
38.51 (99.95 %) |
n/a | 1 (100.00 %) |
4 (0.85 %) |
n/a | 19 (3.31 %) |
0 (0.00 %) |
| 138 | human polyomavirus 12 (hu1403 2013) GCF_000906235.1 |
6 (89.41 %) |
39.60 (99.94 %) |
n/a | 1 (100.00 %) |
4 (0.64 %) |
1 (0.91 %) |
27 (6.74 %) |
0 (0.00 %) |
| 139 | human rotavirus B (Bang373 2013) GCF_000907835.1 |
13 (95.17 %) |
36.97 (99.88 %) |
n/a | 11 (100.00 %) |
3 (0.00 %) |
n/a | 18 (1.22 %) |
0 (0.00 %) |
| 140 | human papillomavirus 154 (PV77 2013) GCF_000908695.1 |
7 (92.75 %) |
37.93 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 10 (1.37 %) |
0 (0.00 %) |
| 141 | human cyclovirus VS5700009 (VS5700009 2013) GCF_000908835.1 |
3 (84.17 %) |
46.45 (99.89 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 1 (0.38 %) |
1 (13.92 %) |
| 142 | human parainfluenza virus 4a (M-25 2013) GCF_000910675.1 |
7 (83.27 %) |
36.23 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.23 %) |
1 (0.22 %) |
13 (1.18 %) |
0 (0.00 %) |
| 143 | human papillomavirus 179 (SIBX16 2013) GCF_000912535.1 |
6 (92.78 %) |
36.76 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.87 %) |
n/a | 7 (1.67 %) |
0 (0.00 %) |
| 144 | human papillomavirus 167 (KC10 2013) GCF_000913075.1 |
6 (92.78 %) |
35.83 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 23 (5.24 %) |
0 (0.00 %) |
| 145 | human endogenous retrovirus K113 (2013) GCF_000913595.1 |
1 (22.17 %) |
41.86 (99.98 %) |
n/a | 1 (100.00 %) |
6 (1.60 %) |
n/a | 14 (2.49 %) |
0 (0.00 %) |
| 146 | human associated cyclovirus 10 (7078A 2014) GCF_000918035.2 |
2 (86.20 %) |
43.41 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 0 (0.00 %) |
0 (0.00 %) |
| 147 | human papillomavirus 178 (2014) GCF_000918095.1 |
7 (92.49 %) |
38.15 (99.95 %) |
n/a | 1 (100.00 %) |
4 (0.53 %) |
2 (0.59 %) |
8 (1.35 %) |
0 (0.00 %) |
| 148 | human cosavirus (Cosavirus_Amsterdam_1994 2014) GCF_000920655.1 |
1 (81.59 %) |
43.53 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 12 (1.59 %) |
0 (0.00 %) |
| 149 | human astrovirus BF34 (BF34 2014) GCF_000923215.1 |
4 (97.29 %) |
43.77 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 3 (0.47 %) |
0 (0.00 %) |
| 150 | human circovirus VS6600022 (VS6600022 2014) GCF_000924015.1 |
4 (85.08 %) |
47.13 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.85 %) |
n/a | 1 (0.25 %) |
2 (49.61 %) |
| 151 | human smacovirus 1 (France/12/2008/3454 2015) GCF_000929235.1 |
2 (69.15 %) |
43.94 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 0 (0.00 %) |
0 (0.00 %) |
| 152 | human associated porprismacovirus 2 (SF2 2015) GCF_000931315.1 |
2 (74.85 %) |
48.83 (99.84 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 2 (0.55 %) |
1 (41.76 %) |
| 153 | human genital-associated circular DNA virus-1 (349 2015) GCF_000973295.1 |
4 (80.18 %) |
54.85 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 2 (1.21 %) |
1 (91.86 %) |
| 154 | human papillomavirus KC5 (KC5 2015) GCF_000989155.1 |
7 (92.99 %) |
36.78 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.71 %) |
0 (0.00 %) |
| 155 | human papillomavirus 201 (HPV201 2015) GCF_001184845.1 |
7 (93.33 %) |
37.71 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.48 %) |
n/a | 5 (0.95 %) |
0 (0.00 %) |
| 156 | human papillomavirus (SE379 2015) GCF_001274345.1 |
6 (93.54 %) |
37.49 (100.00 %) |
n/a | 1 (100.00 %) |
5 (0.98 %) |
1 (2.70 %) |
21 (3.02 %) |
0 (0.00 %) |
| 157 | human pegivirus 2 (UC0125.US 2015) GCF_001310135.2 |
1 (92.98 %) |
53.96 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.49 %) |
2 (90.06 %) |
| 158 | human papillomavirus 163 (KC3 2015) GCF_001430115.1 |
6 (93.54 %) |
37.69 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 13 (1.80 %) |
0 (0.00 %) |
| 159 | human associated gemyvongvirus 1 (DB1 2015) GCF_001448435.1 |
4 (89.04 %) |
51.81 (99.91 %) |
n/a | 1 (100.00 %) |
4 (1.89 %) |
1 (1.89 %) |
1 (2.24 %) |
1 (97.10 %) |
| 160 | human papillomavirus type 156 (GC01 2017) GCF_002006915.1 |
7 (92.47 %) |
36.18 (99.95 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 13 (1.86 %) |
0 (0.00 %) |
| 161 | human papillomavirus type 85 (114B 2017) GCF_002153865.1 |
8 (90.54 %) |
37.76 (98.31 %) |
7 (1.95 %) |
8 (98.05 %) |
3 (0.00 %) |
n/a | 17 (4.34 %) |
0 (0.00 %) |
| 162 | human fecal virus Jorvi3 (Jorvi3 2017) GCF_002219525.1 |
2 (84.04 %) |
32.53 (99.90 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 3 (1.60 %) |
0 (0.00 %) |
| 163 | human fecal virus Jorvi4 (Jorvi4 2017) GCF_002219705.1 |
2 (81.18 %) |
45.77 (99.87 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 1 (0.34 %) |
0 (0.00 %) |
| 164 | human fecal virus Jorvi2 (Jorvi2 2017) GCF_002219885.1 |
5 (72.08 %) |
31.11 (100.00 %) |
n/a | 1 (100.00 %) |
7 (5.43 %) |
n/a | 20 (11.11 %) |
0 (0.00 %) |
| 165 | human feces smacovirus 3 (SmaCV3.21 P21 2017) GCF_002271185.1 |
2 (72.89 %) |
46.99 (100.00 %) |
n/a | 1 (100.00 %) |
4 (2.66 %) |
1 (1.56 %) |
4 (1.25 %) |
0 (0.00 %) |
| 166 | human metapneumovirus (00-1 2018) GCF_002815375.1 |
9 (93.36 %) |
36.29 (100.00 %) |
n/a | 1 (100.00 %) |
7 (1.38 %) |
1 (0.34 %) |
27 (3.46 %) |
0 (0.00 %) |
| 167 | human orthopneumovirus (2018) GCF_002815475.1 |
12 (97.34 %) |
33.24 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.64 %) |
1 (0.24 %) |
19 (3.32 %) |
0 (0.00 %) |
| 168 | human rhinovirus NAT001 (NAT001 2018) GCF_002816885.1 |
1 (92.58 %) |
43.40 (99.94 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 0 (0.00 %) |
0 (0.00 %) |
| 169 | human parechovirus 1 (2018) GCF_002817305.1 |
1 (89.15 %) |
39.06 (99.95 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 4 (1.29 %) |
0 (0.00 %) |
| 170 | human stool-associated circular virus NG13 (NG13 2018) GCF_002819605.1 |
2 (93.58 %) |
43.54 (99.76 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 2 (1.24 %) |
0 (0.00 %) |
| 171 | human hepegivirus (AK-790 2018) GCF_002821385.1 |
1 (96.18 %) |
53.60 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 5 (0.51 %) |
2 (88.97 %) |
| 172 | human gemycircularvirus GeTz1 (GeTz1 2018) GCF_002826025.1 |
4 (77.38 %) |
49.05 (99.91 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 3 (1.23 %) |
0 (0.00 %) |
| 173 | human papillomavirus 71 (2018) GCF_002826825.1 |
1 (24.06 %) |
44.38 (99.98 %) |
n/a | 1 (100.00 %) |
7 (2.47 %) |
3 (1.63 %) |
11 (3.93 %) |
0 (0.00 %) |
| 174 | human papillomavirus 161 (KC1 2018) GCF_002826985.1 |
6 (92.39 %) |
37.73 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 3 (0.36 %) |
0 (0.00 %) |
| 175 | human papillomavirus 172 (2018) GCF_002827005.1 |
7 (95.04 %) |
37.77 (99.96 %) |
1 (0.01 %) |
2 (99.99 %) |
5 (1.22 %) |
n/a | 4 (0.60 %) |
0 (0.00 %) |
| 176 | human papillomavirus 175 (SE87 2018) GCF_002827025.1 |
7 (93.05 %) |
38.87 (99.99 %) |
1 (0.01 %) |
2 (99.99 %) |
4 (0.29 %) |
n/a | 8 (1.00 %) |
1 (3.46 %) |
| 177 | human papillomavirus 204 (A342 2018) GCF_002827045.1 |
7 (92.47 %) |
37.84 (99.97 %) |
n/a | 1 (100.00 %) |
4 (0.50 %) |
n/a | 6 (1.44 %) |
1 (2.92 %) |
| 178 | human papillomavirus 30 (2018) GCF_002987345.1 |
6 (84.46 %) |
40.39 (99.97 %) |
n/a | 1 (100.00 %) |
5 (2.31 %) |
2 (1.03 %) |
14 (4.22 %) |
0 (0.00 %) |
| 179 | human papillomavirus 184 (SIBX17 2018) GCF_002987365.1 |
6 (92.71 %) |
36.89 (99.95 %) |
n/a | 1 (100.00 %) |
4 (0.98 %) |
1 (0.53 %) |
4 (0.40 %) |
0 (0.00 %) |
| 180 | human associated huchismacovirus 1 (Oregon/6/2011/GottageGrove/5A1 2018) GCF_003033475.1 |
2 (69.15 %) |
42.76 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 0 (0.00 %) |
0 (0.00 %) |
| 181 | human associated huchismacovirus 2 (France/8/2008/2444 2018) GCF_003033485.1 |
2 (69.81 %) |
43.97 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
1 (1.38 %) |
2 (0.57 %) |
0 (0.00 %) |
| 182 | human associated huchismacovirus 3 (France/1/2009/3664 2018) GCF_003033495.1 |
2 (70.27 %) |
42.28 (99.84 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 5 (1.79 %) |
0 (0.00 %) |
| 183 | human feces smacovirus 2 (SmaCV2 2018) GCF_003033575.1 |
2 (74.86 %) |
46.00 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 2 (0.54 %) |
1 (19.22 %) |
| 184 | human papillomavirus 187 (ACS447 2018) GCF_003055605.1 |
6 (92.85 %) |
38.90 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 10 (1.36 %) |
0 (0.00 %) |
| 185 | human feces pecovirus (PeCV-NI 2019) GCF_003726995.1 |
2 (72.77 %) |
50.00 (99.90 %) |
1 (0.03 %) |
2 (99.97 %) |
5 (2.46 %) |
n/a | 0 (0.00 %) |
1 (55.12 %) |
| 186 | human DNA virus (IND-KIs-REVA-1990 2019) GCF_003727435.1 |
1 (6.26 %) |
53.36 (100.00 %) |
n/a | 1 (100.00 %) |
6 (1.89 %) |
n/a | 3 (0.59 %) |
1 (93.16 %) |
| 187 | human coronavirus OC43 (ATCC VR-759 2019) GCF_003972325.1 |
11 (97.82 %) |
36.79 (100.00 %) |
n/a | 1 (100.00 %) |
6 (0.43 %) |
1 (0.09 %) |
90 (3.88 %) |
0 (0.00 %) |
| 188 | human papillomavirus 203 (SE369 2019) GCF_004133345.1 |
7 (92.96 %) |
37.54 (99.97 %) |
n/a | 1 (100.00 %) |
4 (0.43 %) |
n/a | 10 (1.33 %) |
0 (0.00 %) |
| 189 | human lung-associated vientovirus FB (2021) GCF_013088445.1 |
3 (86.49 %) |
33.94 (99.97 %) |
n/a | 1 (100.00 %) |
4 (1.15 %) |
1 (1.34 %) |
3 (6.81 %) |
0 (0.00 %) |
| 190 | Influenza B virus (B/Lee/1940 1993) GCF_000820495.2 |
11 (92.51 %) |
40.19 (99.88 %) |
n/a | 8 (100.00 %) |
5 (0.51 %) |
n/a | 23 (1.85 %) |
0 (0.00 %) |
| 191 | Influenza A virus (A/Hong Kong/1073/99 2003) GCF_000851145.1 |
12 (97.14 %) |
44.07 (99.90 %) |
n/a | 8 (100.00 %) |
3 (0.00 %) |
n/a | 10 (0.81 %) |
0 (0.00 %) |
| 192 | Influenza C virus (C/Ann Arbor/1/50 2004) GCF_000856665.10 |
11 (95.87 %) |
37.28 (99.91 %) |
n/a | 7 (100.00 %) |
3 (0.00 %) |
n/a | 42 (4.23 %) |
0 (0.00 %) |
| 193 | Influenza A virus (A/Goose/Guangdong/1/96H5N1 2005) GCF_000864105.1 |
15 (96.68 %) |
44.12 (99.93 %) |
n/a | 8 (100.00 %) |
3 (0.00 %) |
n/a | 3 (0.35 %) |
0 (0.00 %) |
| 194 | Influenza A virus (A/New York/392/2004 2005) GCF_000865085.1 |
15 (96.37 %) |
42.94 (99.91 %) |
n/a | 8 (100.00 %) |
4 (0.57 %) |
n/a | 6 (0.33 %) |
0 (0.00 %) |
| 195 | Influenza A virus (A/Puerto Rico/8/1934 1982) GCF_000865725.1 |
15 (96.32 %) |
43.40 (99.90 %) |
n/a | 8 (100.00 %) |
3 (0.00 %) |
n/a | 7 (0.68 %) |
0 (0.00 %) |
| 196 | Influenza A virus (A/Korea/426/1968 2005) GCF_000866645.1 |
15 (97.49 %) |
43.41 (99.89 %) |
1 (0.01 %) |
9 (99.99 %) |
3 (0.00 %) |
n/a | 4 (0.28 %) |
0 (0.00 %) |
| 197 | Influenza A virus (A/Shanghai/02/2013 2015) GCF_000928555.1 |
15 (99.34 %) |
44.36 (99.92 %) |
1 (0.01 %) |
9 (99.99 %) |
3 (0.00 %) |
n/a | 4 (0.30 %) |
0 (0.00 %) |
| 198 | Influenza A virus (A/California/07/2009 2015) GCF_001343785.1 |
14 (99.84 %) |
43.70 (99.90 %) |
4 (0.03 %) |
12 (99.97 %) |
3 (0.00 %) |
n/a | 11 (0.83 %) |
0 (0.00 %) |
| 199 | Isfahan virus (2013) GCF_000906835.1 |
5 (96.29 %) |
41.93 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 20 (1.82 %) |
0 (0.00 %) |
| 200 | Japanese encephalitis virus (1993) GCF_000862145.1 |
3 (93.83 %) |
51.43 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 2 (0.15 %) |
0 (0.00 %) |
| 201 | JC polyomavirus (Mad1 1993) GCF_000863805.1 |
9 (96.55 %) |
40.45 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
1 (3.82 %) |
17 (5.52 %) |
0 (0.00 %) |
| 202 | La Crosse virus (human/78 2002) GCF_000850965.1 |
4 (94.68 %) |
36.68 (99.95 %) |
n/a | 3 (100.00 %) |
4 (0.32 %) |
n/a | 26 (2.75 %) |
0 (0.00 %) |
| 203 | Lagos bat lyssavirus (0406SEN 2013) GCF_000905975.1 |
5 (90.15 %) |
43.48 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 7 (0.41 %) |
0 (0.00 %) |
| 204 | Langat virus (TP21 2000) GCF_000860805.1 |
1 (93.62 %) |
54.31 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 7 (0.56 %) |
1 (2.18 %) |
| 205 | Lassa mammarenavirus (Josiah 1998) GCF_000851705.1 |
4 (94.96 %) |
42.06 (99.94 %) |
n/a | 2 (100.00 %) |
3 (0.00 %) |
1 (0.37 %) |
9 (1.70 %) |
0 (0.00 %) |
| 206 | Louping ill virus (369/T2 1997) GCF_000863165.1 |
1 (94.24 %) |
54.86 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.52 %) |
3 (12.29 %) |
| 207 | Lymphocytic choriomeningitis mammarenavirus (Armstrong 53b 1993) GCF_000851025.1 |
4 (97.52 %) |
42.29 (99.99 %) |
n/a | 2 (100.00 %) |
3 (0.00 %) |
n/a | 1 (0.07 %) |
0 (0.00 %) |
| 208 | Machupo mammarenavirus (Carvallo 2003) GCF_000853725.1 |
4 (94.98 %) |
41.77 (99.95 %) |
n/a | 2 (100.00 %) |
3 (0.00 %) |
n/a | 4 (0.62 %) |
0 (0.00 %) |
| 209 | Marburg marburgvirus (Marburg virus/H.sapiens-tc/KEN/1980/Mt. Elgon-Musoke 1994) GCF_000857325.2 |
7 (98.72 %) |
38.29 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 16 (1.05 %) |
0 (0.00 %) |
| 210 | Mayaro virus (2002) GCF_000863385.1 |
5 (96.78 %) |
50.37 (99.99 %) |
n/a | 1 (100.00 %) |
5 (0.76 %) |
n/a | 4 (1.59 %) |
5 (42.02 %) |
| 211 | Measles morbillivirus (Ichinose-B95a 1998) GCF_000854845.1 |
7 (94.55 %) |
47.43 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 9 (0.91 %) |
1 (3.88 %) |
| 212 | Merkel cell polyomavirus (R17b 2008) GCF_000874865.1 |
5 (88.06 %) |
40.69 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 8 (1.78 %) |
0 (0.00 %) |
| 213 | Middle East respiratory syndrome-related coronavirus (HCoV-EMC HCoV-EMC/2012 2012) GCF_000901155.1 |
12 (97.48 %) |
41.24 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.12 %) |
n/a | 4 (0.14 %) |
0 (0.00 %) |
| 214 | Mokola lyssavirus (2004) GCF_000856485.1 |
5 (98.49 %) |
44.42 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 8 (0.73 %) |
0 (0.00 %) |
| 215 | Molluscum contagiosum virus subtype 1 (1996) GCF_000843325.1 |
163 (85.07 %) |
63.36 (100.00 %) |
n/a | 1 (100.00 %) |
128 (3.25 %) |
92 (4.74 %) |
1,361 (17.29 %) |
1 (99.95 %) |
| 216 | Monkeypox virus (Zaire-96-I-16 2021) GCF_000857045.1 |
191 (87.29 %) |
33.09 (100.00 %) |
n/a | 1 (100.00 %) |
37 (0.96 %) |
24 (0.57 %) |
1,102 (9.51 %) |
0 (0.00 %) |
| 217 | Monkeypox virus (MPXV-M5312_HM12_Rivers 2022) GCF_014621545.1 |
179 (83.90 %) |
33.03 (100.00 %) |
n/a | 1 (100.00 %) |
38 (0.78 %) |
22 (0.54 %) |
1,097 (9.44 %) |
0 (0.00 %) |
| 218 | Mumps orthorubulavirus (Miyahara 2000) GCF_000856685.1 |
8 (92.81 %) |
42.49 (99.97 %) |
n/a | 1 (100.00 %) |
4 (0.24 %) |
n/a | 10 (0.59 %) |
0 (0.00 %) |
| 219 | Mupapillomavirus 1 (1982) GCF_000866405.1 |
7 (86.17 %) |
40.28 (100.00 %) |
n/a | 1 (100.00 %) |
5 (1.47 %) |
1 (0.40 %) |
7 (1.87 %) |
1 (2.75 %) |
| 220 | Murray Valley encephalitis virus (1999) GCF_000863565.1 |
3 (93.56 %) |
48.72 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 1 (0.23 %) |
1 (1.84 %) |
| 221 | Nipah henipavirus (2000) GCF_000863625.1 |
11 (82.06 %) |
38.17 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.17 %) |
n/a | 8 (0.37 %) |
0 (0.00 %) |
| 222 | Norovirus GI (1993) GCF_000864005.1 |
3 (99.09 %) |
48.03 (99.95 %) |
n/a | 1 (100.00 %) |
4 (0.52 %) |
1 (0.35 %) |
3 (0.31 %) |
0 (0.00 %) |
| 223 | Onyong-nyong virus (1993) GCF_000863005.1 |
5 (100.00 %) |
48.32 (100.00 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
2 (1.28 %) |
7 (1.39 %) |
5 (15.80 %) |
| 224 | Orf virus (OV-SA00 ORFD 2004) GCF_000844845.1 |
130 (89.67 %) |
63.44 (100.00 %) |
n/a | 1 (100.00 %) |
56 (2.03 %) |
37 (1.70 %) |
1,076 (16.55 %) |
1 (100.00 %) |
| 225 | Oropouche virus (2004) GCF_000853785.1 |
4 (97.72 %) |
35.40 (99.96 %) |
n/a | 3 (100.00 %) |
3 (0.00 %) |
n/a | 33 (3.75 %) |
0 (0.00 %) |
| 226 | Orthohepevirus A (Xinjiang 1993) GCF_000861105.1 |
3 (98.65 %) |
57.95 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 12 (1.80 %) |
1 (89.53 %) |
| 227 | Parainfluenza virus 5 (W3A 2004) GCF_000854805.1 |
9 (99.06 %) |
42.27 (99.99 %) |
n/a | 1 (100.00 %) |
4 (0.24 %) |
n/a | 3 (0.30 %) |
0 (0.00 %) |
| 228 | Parechovirus A (Gregory 1998) GCF_000861505.1 |
1 (89.00 %) |
39.48 (99.96 %) |
n/a | 1 (100.00 %) |
4 (0.30 %) |
n/a | 6 (0.98 %) |
0 (0.00 %) |
| 229 | Pichinde virus (AN3739 2004) GCF_000856465.1 |
4 (96.57 %) |
41.84 (99.94 %) |
n/a | 2 (100.00 %) |
3 (0.00 %) |
n/a | 2 (0.44 %) |
0 (0.00 %) |
| 230 | Powassan virus (LB 1993) GCF_000860485.1 |
1 (94.55 %) |
53.32 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 14 (1.20 %) |
1 (3.47 %) |
| 231 | Punta Toro virus (Adames 2018) GCF_002815115.1 |
4 (92.61 %) |
40.36 (99.94 %) |
n/a | 3 (100.00 %) |
5 (1.74 %) |
3 (0.77 %) |
16 (3.35 %) |
0 (0.00 %) |
| 232 | Puumala orthohantavirus (Sotkamo 2003) GCF_000854405.1 |
3 (39.37 %) |
36.97 (99.98 %) |
n/a | 3 (100.00 %) |
5 (0.66 %) |
n/a | 33 (3.47 %) |
0 (0.00 %) |
| 233 | Rabies lyssavirus (1993) GCF_000859625.1 |
5 (95.29 %) |
45.10 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 11 (1.15 %) |
0 (0.00 %) |
| 234 | Rhinovirus A (1993) GCF_000862245.1 |
1 (90.81 %) |
39.05 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 1 (0.15 %) |
0 (0.00 %) |
| 235 | Rift Valley fever virus (ZH-548 2010) GCF_000847345.1 |
4 (95.24 %) |
45.11 (99.97 %) |
n/a | 3 (100.00 %) |
4 (0.49 %) |
n/a | 8 (1.04 %) |
0 (0.00 %) |
| 236 | Rosavirus A2 (GA7403 2014) GCF_000918175.1 |
1 (82.95 %) |
51.41 (99.99 %) |
1 (0.01 %) |
2 (99.99 %) |
3 (0.00 %) |
n/a | 5 (0.67 %) |
1 (4.60 %) |
| 237 | Ross River virus (NB5092 1993) GCF_000862165.1 |
5 (96.96 %) |
51.41 (99.90 %) |
20 (0.47 %) |
20 (99.53 %) |
4 (0.90 %) |
n/a | 4 (1.54 %) |
8 (48.39 %) |
| 238 | Rotavirus C (Bristol 2005) GCF_000864225.1 |
11 (95.04 %) |
31.63 (99.89 %) |
n/a | 11 (100.00 %) |
7 (1.19 %) |
n/a | 33 (2.72 %) |
0 (0.00 %) |
| 239 | Rotavirus A (RVA/Simian-tc/ZAF/SA11-H96/1958/G3P5B[2] 2008) GCF_000880735.1 |
12 (94.00 %) |
33.67 (99.88 %) |
n/a | 11 (100.00 %) |
4 (0.19 %) |
n/a | 21 (1.24 %) |
0 (0.00 %) |
| 240 | Rubella virus (F-Therien 1993) GCF_000863025.1 |
2 (99.15 %) |
69.60 (99.98 %) |
n/a | 1 (100.00 %) |
5 (0.85 %) |
n/a | 54 (9.70 %) |
1 (98.66 %) |
| 241 | Saint Louis encephalitis virus (Kern217 2005) GCF_000866785.1 |
1 (94.09 %) |
49.75 (100.00 %) |
1 (0.01 %) |
2 (99.99 %) |
3 (0.00 %) |
n/a | 9 (1.35 %) |
1 (3.05 %) |
| 242 | Salivirus NG-J1 (NG-J1 2009) GCF_000886535.1 |
1 (89.26 %) |
56.70 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 17 (2.15 %) |
2 (48.16 %) |
| 243 | Sandfly fever Naples virus (Toscana ISS.Phl.3 2004) GCF_000854285.1 |
4 (98.01 %) |
44.60 (99.94 %) |
n/a | 3 (100.00 %) |
4 (0.30 %) |
n/a | 13 (2.02 %) |
0 (0.00 %) |
| 244 | Sapovirus C12 (C12 2004) GCF_000855765.1 |
2 (98.27 %) |
51.73 (99.99 %) |
1 (0.01 %) |
2 (99.99 %) |
3 (0.00 %) |
n/a | 1 (0.13 %) |
2 (7.50 %) |
| 245 | SARS coronavirus Tor2 (Tor2 2003) GCF_000864885.1 |
16 (97.60 %) |
40.76 (100.00 %) |
n/a | 1 (100.00 %) |
4 (0.08 %) |
n/a | 18 (0.74 %) |
0 (0.00 %) |
| 246 | Semliki Forest virus (1987) GCF_000860285.1 |
4 (96.64 %) |
53.22 (99.98 %) |
n/a | 1 (100.00 %) |
4 (0.66 %) |
n/a | 4 (1.46 %) |
1 (92.56 %) |
| 247 | Seoul orthohantavirus (80-39 2003) GCF_000855645.1 |
3 (93.29 %) |
39.00 (99.96 %) |
n/a | 3 (100.00 %) |
5 (0.56 %) |
n/a | 14 (1.15 %) |
0 (0.00 %) |
| 248 | Simian foamy virus (1994) GCF_000848485.1 |
6 (78.31 %) |
38.96 (99.99 %) |
n/a | 1 (100.00 %) |
5 (0.50 %) |
n/a | 7 (0.57 %) |
0 (0.00 %) |
| 249 | Sindbis virus (1993) GCF_000860545.1 |
5 (100.00 %) |
50.91 (99.97 %) |
n/a | 1 (100.00 %) |
4 (0.34 %) |
n/a | 3 (0.28 %) |
1 (93.38 %) |
| 250 | smallpox virus (India-1967, ssp. major Ind3 1993) GCF_000859885.1 |
197 (87.60 %) |
32.73 (100.00 %) |
n/a | 1 (100.00 %) |
31 (0.69 %) |
7 (0.57 %) |
1,031 (9.09 %) |
0 (0.00 %) |
| 251 | Snowshoe hare virus (2021) GCF_004789895.1 |
4 (96.87 %) |
37.25 (99.93 %) |
n/a | 3 (100.00 %) |
5 (0.83 %) |
n/a | 15 (1.23 %) |
0 (0.00 %) |
| 252 | Torque teno virus 1 (VT416 1998) GCF_000857545.1 |
5 (70.74 %) |
49.06 (99.95 %) |
n/a | 1 (100.00 %) |
4 (0.80 %) |
n/a | 17 (6.93 %) |
2 (35.41 %) |
| 253 | Uukuniemi virus (2003) GCF_000851865.1 |
4 (96.08 %) |
47.69 (99.94 %) |
n/a | 3 (100.00 %) |
3 (0.00 %) |
n/a | 6 (0.86 %) |
0 (0.00 %) |
| 254 | Vaccinia virus (WR (Western Reserve) 2005) GCF_000860085.1 |
223 (88.80 %) |
33.34 (100.00 %) |
n/a | 1 (100.00 %) |
26 (0.57 %) |
10 (3.43 %) |
744 (9.15 %) |
0 (0.00 %) |
| 255 | Varicella-zoster virus (Dumas 1987) GCF_000858285.1 |
74 (89.36 %) |
46.02 (100.00 %) |
n/a | 1 (100.00 %) |
14 (0.32 %) |
17 (0.92 %) |
421 (5.39 %) |
1 (0.20 %) |
| 256 | Venezuelan equine encephalitis virus (1993) GCF_000862105.1 |
6 (100.00 %) |
50.12 (99.97 %) |
n/a | 1 (100.00 %) |
4 (0.27 %) |
1 (0.30 %) |
6 (1.47 %) |
4 (15.75 %) |
| 257 | Vesicular stomatitis Indiana virus (1993) GCF_000850045.1 |
4 (91.34 %) |
41.74 (99.99 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 8 (0.60 %) |
0 (0.00 %) |
| 258 | West Nile virus (956 1993) GCF_000861085.1 |
3 (93.90 %) |
51.06 (99.98 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 2 (0.19 %) |
3 (7.47 %) |
| 259 | Western equine encephalitis virus (71V-1658 2000) GCF_000850885.1 |
4 (96.79 %) |
49.21 (99.97 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 1 (0.64 %) |
3 (52.96 %) |
| 260 | WU Polyomavirus (B0 2007) GCF_000870785.1 |
6 (85.79 %) |
39.18 (99.92 %) |
n/a | 1 (100.00 %) |
4 (1.03 %) |
1 (0.71 %) |
16 (3.46 %) |
0 (0.00 %) |
| 261 | Yaba monkey tumor virus (2003) GCF_000845705.1 |
140 (94.29 %) |
29.83 (100.00 %) |
n/a | 1 (100.00 %) |
24 (0.67 %) |
6 (0.47 %) |
1,223 (18.16 %) |
0 (0.00 %) |
| 262 | Yaba-like disease virus (2001) GCF_000847185.1 |
152 (95.76 %) |
27.00 (100.00 %) |
n/a | 1 (100.00 %) |
39 (1.06 %) |
10 (0.44 %) |
1,396 (21.09 %) |
0 (0.00 %) |
| 263 | Yellow fever virus (17D vaccine strain 1986) GCF_000857725.1 |
1 (100.00 %) |
49.72 (99.98 %) |
n/a | 1 (100.00 %) |
4 (0.27 %) |
n/a | 1 (0.28 %) |
0 (0.00 %) |
| 264 | Zaire ebolavirus (Ebola virus/H.sapiens-tc/COD/1976/Yambuku-Mayinga 1999) GCF_000848505.1 |
11 (95.31 %) |
41.07 (99.98 %) |
n/a | 1 (100.00 %) |
4 (0.18 %) |
n/a | 4 (0.15 %) |
1 (1.12 %) |
| 265 | Zika virus (MR 766 2009) GCF_000882815.3 |
1 (95.05 %) |
50.95 (99.96 %) |
n/a | 1 (100.00 %) |
3 (0.00 %) |
n/a | 3 (0.26 %) |
0 (0.00 %) |
| TOTALS: | total assembly count 265 | ||||||||
| Additional hubs with collections of assemblies | |||
|---|---|---|---|
| Collection | Hub index pages: | Assembly statistics: | Track statistics: |
| Primates | 207 assemblies | assembly stats | track stats |
| Mammals | 493 assemblies | assembly stats | track stats |
| Birds | 304 assemblies | assembly stats | track stats |
| Fishes | 348 assemblies | assembly stats | track stats |
| other vertebrates | 180 assemblies | assembly stats | track stats |
| Invertebrates | 637 assemblies | assembly stats | track stats |
| Plants | 251 assemblies | assembly stats | track stats |
| Fungi | 612 assemblies | assembly stats | track stats |
| Viruses | 265 assemblies | assembly stats | track stats |
| Bacteria | 74 assemblies | assembly stats | track stats |
| legacy/superseded | 431 assemblies | assembly stats | track stats |
| collections below are subsets of the assemblies above | |||
| VGP - Vertebrate Genome Project | 723 assemblies | assembly stats | track stats |
| CCGP - The California Conservation Genomics Project | 126 assemblies | assembly stats | track stats |
| HPRC - Human Pangenome Reference Consortium | 96 assemblies | assembly stats | track stats |